View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15457_low_4 (Length: 596)

Name: NF15457_low_4
Description: NF15457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15457_low_4
NF15457_low_4
[»] chr5 (26 HSPs)
chr5 (1-589)||(14705753-14706341)
chr5 (453-501)||(36796628-36796676)
chr5 (453-489)||(499652-499688)
chr5 (450-501)||(10771806-10771857)
chr5 (450-497)||(11615572-11615619)
chr5 (450-501)||(19177546-19177597)
chr5 (453-499)||(17369306-17369352)
chr5 (451-497)||(27153259-27153305)
chr5 (453-501)||(13508541-13508589)
chr5 (449-501)||(31723906-31723958)
chr5 (453-499)||(20982133-20982179)
chr5 (453-499)||(34198524-34198570)
chr5 (453-495)||(42034167-42034209)
chr5 (453-494)||(14331474-14331515)
chr5 (377-499)||(14714683-14714810)
chr5 (444-501)||(40335785-40335842)
chr5 (453-490)||(41419431-41419468)
chr5 (453-490)||(41534550-41534587)
chr5 (457-501)||(4855796-4855840)
chr5 (453-485)||(14932413-14932445)
chr5 (453-493)||(28578954-28578994)
chr5 (453-501)||(32194013-32194061)
chr5 (449-501)||(33961784-33961836)
chr5 (447-499)||(35135567-35135619)
chr5 (443-499)||(37968980-37969035)
chr5 (453-489)||(39594920-39594956)
[»] chr1 (33 HSPs)
chr1 (452-501)||(29793618-29793667)
chr1 (450-499)||(5157175-5157224)
chr1 (453-501)||(4757439-4757487)
chr1 (453-501)||(6292593-6292641)
chr1 (446-501)||(33723296-33723351)
chr1 (454-499)||(10199330-10199375)
chr1 (457-502)||(15515656-15515701)
chr1 (449-501)||(9602571-9602623)
chr1 (451-483)||(18403126-18403158)
chr1 (453-501)||(24460322-24460370)
chr1 (453-501)||(48748516-48748564)
chr1 (454-497)||(2522701-2522744)
chr1 (458-501)||(25944542-25944585)
chr1 (457-500)||(32958739-32958782)
chr1 (448-499)||(51929378-51929429)
chr1 (447-501)||(3597196-3597250)
chr1 (463-501)||(43420359-43420397)
chr1 (454-498)||(6279503-6279547)
chr1 (453-501)||(6659781-6659829)
chr1 (453-501)||(7217995-7218043)
chr1 (453-501)||(15558312-15558360)
chr1 (453-501)||(15784897-15784945)
chr1 (451-495)||(18327065-18327109)
chr1 (457-501)||(28837278-28837322)
chr1 (452-492)||(30257794-30257834)
chr1 (453-493)||(30259407-30259447)
chr1 (453-501)||(33976279-33976327)
chr1 (453-501)||(34536259-34536307)
chr1 (457-501)||(35017683-35017727)
chr1 (453-489)||(41505787-41505823)
chr1 (453-501)||(44115826-44115874)
chr1 (445-489)||(48282235-48282279)
chr1 (453-501)||(52013988-52014036)
[»] chr7 (23 HSPs)
chr7 (450-498)||(32730166-32730214)
chr7 (454-500)||(529464-529510)
chr7 (453-495)||(47046029-47046071)
chr7 (453-490)||(30812250-30812287)
chr7 (447-499)||(3836598-3836650)
chr7 (449-501)||(8427114-8427166)
chr7 (453-501)||(47041960-47042008)
chr7 (453-500)||(1418521-1418568)
chr7 (450-489)||(9210934-9210973)
chr7 (453-498)||(5276594-5276639)
chr7 (453-498)||(7513663-7513708)
chr7 (448-489)||(19302479-19302520)
chr7 (455-492)||(46946017-46946054)
chr7 (453-489)||(11619079-11619115)
chr7 (449-501)||(12234806-12234858)
chr7 (453-501)||(23214956-23215004)
chr7 (453-501)||(29363609-29363657)
chr7 (443-495)||(31341242-31341294)
chr7 (453-489)||(33266407-33266443)
chr7 (453-489)||(33673190-33673226)
chr7 (452-496)||(33871347-33871391)
chr7 (453-501)||(40598406-40598454)
chr7 (449-501)||(44289960-44290012)
[»] chr4 (26 HSPs)
chr4 (454-501)||(1017129-1017176)
chr4 (453-516)||(24193618-24193681)
chr4 (450-501)||(32420976-32421027)
chr4 (451-501)||(18628472-18628522)
chr4 (457-501)||(18512440-18512484)
chr4 (453-489)||(27043751-27043787)
chr4 (437-501)||(56186803-56186867)
chr4 (446-501)||(22845620-22845674)
chr4 (453-499)||(1075561-1075607)
chr4 (451-501)||(19305027-19305077)
chr4 (453-499)||(28259376-28259422)
chr4 (453-501)||(7367975-7368023)
chr4 (450-489)||(8420908-8420948)
chr4 (454-494)||(10365883-10365923)
chr4 (453-489)||(15173224-15173260)
chr4 (453-489)||(17822786-17822822)
chr4 (453-497)||(17975258-17975302)
chr4 (453-501)||(19429391-19429439)
chr4 (453-501)||(28615435-28615483)
chr4 (453-501)||(32071964-32072012)
chr4 (453-489)||(42403944-42403980)
chr4 (453-501)||(44320050-44320098)
chr4 (449-501)||(47146045-47146097)
chr4 (453-489)||(49940088-49940124)
chr4 (457-501)||(54277248-54277292)
chr4 (453-501)||(55870263-55870311)
[»] chr3 (17 HSPs)
chr3 (449-501)||(22667504-22667556)
chr3 (449-501)||(22724143-22724195)
chr3 (453-501)||(20210849-20210897)
chr3 (453-501)||(21872216-21872264)
chr3 (453-488)||(26990146-26990181)
chr3 (450-497)||(41848634-41848681)
chr3 (453-500)||(51929843-51929890)
chr3 (447-489)||(16072956-16072998)
chr3 (453-499)||(31512486-31512532)
chr3 (452-489)||(26911704-26911741)
chr3 (456-501)||(33965412-33965457)
chr3 (453-501)||(20173811-20173859)
chr3 (451-499)||(24158435-24158483)
chr3 (453-489)||(25447166-25447202)
chr3 (453-501)||(32663739-32663787)
chr3 (453-501)||(37138383-37138431)
chr3 (453-501)||(44014719-44014767)
[»] chr2 (26 HSPs)
chr2 (453-501)||(13866979-13867027)
chr2 (453-501)||(22878199-22878247)
chr2 (448-497)||(43985314-43985363)
chr2 (457-497)||(3458700-3458740)
chr2 (453-501)||(15370244-15370292)
chr2 (449-501)||(28803447-28803499)
chr2 (453-501)||(40759261-40759309)
chr2 (453-493)||(40837358-40837398)
chr2 (453-501)||(41170711-41170759)
chr2 (453-500)||(18525162-18525209)
chr2 (453-500)||(28810373-28810420)
chr2 (450-501)||(40158819-40158870)
chr2 (464-498)||(29430862-29430896)
chr2 (453-498)||(1830143-1830188)
chr2 (453-498)||(8017538-8017583)
chr2 (452-501)||(21616580-21616629)
chr2 (453-502)||(26372648-26372697)
chr2 (457-490)||(41516949-41516982)
chr2 (453-497)||(3078529-3078573)
chr2 (453-489)||(18179062-18179098)
chr2 (453-489)||(27317492-27317528)
chr2 (453-489)||(30331864-30331900)
chr2 (453-501)||(35329739-35329787)
chr2 (453-489)||(40059382-40059418)
chr2 (453-489)||(40085282-40085318)
chr2 (453-501)||(40851699-40851747)
[»] chr8 (29 HSPs)
chr8 (453-500)||(4560604-4560651)
chr8 (455-502)||(10560147-10560194)
chr8 (432-497)||(34290974-34291039)
chr8 (449-497)||(1821934-1821982)
chr8 (449-497)||(1856379-1856427)
chr8 (453-501)||(7714343-7714391)
chr8 (453-501)||(9700102-9700150)
chr8 (453-501)||(18331815-18331863)
chr8 (451-499)||(22705031-22705079)
chr8 (453-489)||(38602440-38602476)
chr8 (453-499)||(2606152-2606198)
chr8 (453-495)||(8060775-8060817)
chr8 (447-501)||(43368615-43368669)
chr8 (452-501)||(1561378-1561427)
chr8 (456-501)||(6950423-6950468)
chr8 (457-501)||(1892149-1892193)
chr8 (453-501)||(2487929-2487977)
chr8 (453-501)||(7008699-7008747)
chr8 (453-501)||(10488564-10488612)
chr8 (453-501)||(14926903-14926951)
chr8 (453-501)||(16162861-16162909)
chr8 (449-501)||(20186381-20186433)
chr8 (449-501)||(20205448-20205500)
chr8 (447-495)||(29168776-29168824)
chr8 (453-489)||(30251375-30251411)
chr8 (453-497)||(32976478-32976522)
chr8 (457-501)||(39881646-39881690)
chr8 (449-501)||(43393689-43393741)
chr8 (449-489)||(43717851-43717891)
[»] chr6 (16 HSPs)
chr6 (453-499)||(13908343-13908389)
chr6 (453-499)||(31776193-31776239)
chr6 (453-501)||(8420117-8420166)
chr6 (449-501)||(12111068-12111120)
chr6 (458-501)||(6742912-6742955)
chr6 (458-501)||(7351597-7351640)
chr6 (447-501)||(2732160-2732216)
chr6 (454-499)||(17241082-17241127)
chr6 (452-501)||(26559159-26559208)
chr6 (453-501)||(738462-738510)
chr6 (463-499)||(3750100-3750136)
chr6 (453-501)||(4325226-4325274)
chr6 (453-501)||(8010458-8010506)
chr6 (453-501)||(10016724-10016772)
chr6 (453-489)||(20861619-20861655)
chr6 (453-489)||(21405075-21405111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (453-499)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 553; Significance: 0; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 1 - 589
Target Start/End: Original strand, 14705753 - 14706341
Alignment:
Q  1 gcctgcagcaatatcgaaccagctctaaagaatccagtgcatctctgcaatccatccacctcattacgttgtactacagtgtcataaactttaaactaaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14705753 gcctgcagcaatatcgaaccagccctaaagaatccagtgcatctctgcaatccatccacctcattactttgtactacagtgttataaactttaaactaaa 14705852  T
Q  101 atttgccatgagataaacactgaaatgctgttgagaaatctagtatatacacgactatatcattattatatataatcacttcttaaaaagttaagctaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  14705853 atttgccatgagataaacactgaaatgctgttgagaaatctagtatatacacgactatatcattattatatataatcacttcttaaaaagttaagccaaa 14705952  T
Q  201 agcaaacaaattcataaattatgatcattgtttaatcttaaaactgcttcaagttaccgtgctcatccacaacatatagtcatatactacacaaaagtgc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14705953 agcaaacaaattcataaattatgatcattgtttaatcttaaaactgcttcaagttaccgtgctcatccacaacatatagtcatatactacacaaaagtgc 14706052  T
Q  301 aattttaaggaaaacatcaacattcaaacaaatataatcatgctactacaagaagaaattggatacaaaattatggtcatagccaaagcattccggagac 400  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  14706053 aattttaaggaaaacatcaacattgaaacaaatataatcatgctactacaagacgaaattgaatacaaaattatggtcatagccaaagcattccggagac 14706152  T
Q  401 caattactacaaaataatggcacccaaaacaaattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706153 caattactacaaaataatggcacccaaaacaaattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgag 14706252  T
Q  501 aagtgaaactatttggagagttgtataagctcttttcaacttaattatctccataaactcatagggataacttacgaaaacagtataat 589  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706253 atgtgaaactatttgaagagttgtataagctcttttcaacttaattatctccataaactcatagggataacttacgaaaacagtataat 14706341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 36796628 - 36796676
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  36796628 tttggattgacttatttgagcttatctaatgacataaacacttgtgaga 36796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 499652 - 499688
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||||||||||||||||    
T  499652 tttggattgacttatttgagcttacctactgacataa 499688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 501
Target Start/End: Original strand, 10771806 - 10771857
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||| |||||||||||||| |||||| ||||| |||||||||||    
T  10771806 ctatttggattggcttatttgagcttatctactggcataagcacttgtgaga 10771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 11615572 - 11615619
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  11615572 ctatttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 19177597 - 19177546
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||||| ||||||| || ||| |||||||||||||    
T  19177597 ctatttggattgacttatttgagtttacctattggcatgaacacttgtgaga 19177546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 17369352 - 17369306
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||    
T  17369352 tttggattgacttatttgaacttatctactgacataatcacttgtga 17369306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 497
Target Start/End: Original strand, 27153259 - 27153305
Alignment:
Q  451 tatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||    
T  27153259 tatttggattgacttctttgagcttacctactggcaaaaacacttgt 27153305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 13508589 - 13508541
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||    
T  13508589 tttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 31723958 - 31723906
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||    
T  31723958 cctatttggattgacttatttgagcttatgtactagcataaacacttatgaga 31723906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Original strand, 20982133 - 20982179
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||||    
T  20982133 tttggattggcttatttgagcttatctactgtcgtaaacacttgtga 20982179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 34198570 - 34198524
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||    
T  34198570 tttggattgacttatttgagtttatttactaacataaacacttgtga 34198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 42034209 - 42034167
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacactt 495  Q
    ||||||||  ||||||||||||||||||||||||||| |||||    
T  42034209 tttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 494
Target Start/End: Complemental strand, 14331515 - 14331474
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacact 494  Q
    |||||||||||||||||||||||| |||||| ||||| ||||    
T  14331515 tttggattgacttatttgagcttatctactgtcataagcact 14331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 14714683 - 14714810
Alignment:
Q  377 tcatagccaaagcattccggagaccaatt-actacaaaataatggcacccaaaacaaa---ttgtgaaactaaagacc-tatttggattgacttatttga 471  Q
    |||||||||||| || ||||| || |||| | || |||||||||||||| |||| |||   ||||||||||||||  | | |||| |||| || ||||||    
T  14714683 tcatagccaaagtatgccggaaacaaatttagtaaaaaataatggcaccaaaaaaaaaaagttgtgaaactaaagggcatgtttgaattggctcatttga 14714782  T
Q  472 gcttacctactgacataaacacttgtga 499  Q
    ||||| | |||||||||| |||||||||    
T  14714783 gcttatccactgacataagcacttgtga 14714810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 40335785 - 40335842
Alignment:
Q  444 aaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||| ||| |||||||||||||||||||| ||| |||||  || ||||||||||||||    
T  40335785 aaaggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgaga 40335842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Complemental strand, 41419468 - 41419431
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaa 490  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41419468 tttggattgacttatttgagctaatctactgacataaa 41419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Complemental strand, 41534587 - 41534550
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaa 490  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41534587 tttggattgacttatttgagctaatctactgacataaa 41534550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 4855840 - 4855796
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||  || |||| |||||||||||||||    
T  4855840 gattgacttatttgagcttatataatgacttaaacacttgtgaga 4855796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 485
Target Start/End: Complemental strand, 14932445 - 14932413
Alignment:
Q  453 tttggattgacttatttgagcttacctactgac 485  Q
    |||||||||||||||||||||||| ||||||||    
T  14932445 tttggattgacttatttgagcttatctactgac 14932413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 493
Target Start/End: Complemental strand, 28578994 - 28578954
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacac 493  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  28578994 tttgaattgacttatttgagcttatctactgacaaaaacac 28578954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 32194013 - 32194061
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||| ||| ||| ||||  ||||||||||    
T  32194013 tttggattgacttatttgagcttaactaatgatataagaacttgtgaga 32194061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 33961836 - 33961784
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||| ||||||||||||| |||| ||||||| ||||| |||||    
T  33961836 cctatttgaattgaattatttgagcttatctacggacataagcacttatgaga 33961784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 35135567 - 35135619
Alignment:
Q  447 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||| |||||||| |||||||| |||||  |||||||||||| |||||||||    
T  35135567 gacctgtttggattaacttatttcagcttctctactgacataaccacttgtga 35135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 37969035 - 37968980
Alignment:
Q  443 taaagacctatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||||  ||||||||    
T  37969035 taaagacctatctggat-gacttgtttgagcttatctactgacataagtacttgtga 37968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 39594956 - 39594920
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| |||| |||||||    
T  39594956 tttggattgacttatttgagcttatctaccgacataa 39594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 29793618 - 29793667
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  29793618 atttgtattgacttatttgagcttatctactgacataaacacttgtgaga 29793667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 499
Target Start/End: Complemental strand, 5157224 - 5157175
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  5157224 ctatttggattgacttatttgaacttatctacggacataaacacttgtga 5157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 4757487 - 4757439
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgaga 4757439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 6292641 - 6292593
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  6292641 tttggattgacttatttgagcttatctactgacataagcacttttgaga 6292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 33723296 - 33723351
Alignment:
Q  446 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||| ||||||||||||||||||| |||| |||||  |||||||||||||||||    
T  33723296 agacctgtttggattgacttatttgaacttatctactaccataaacacttgtgaga 33723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 10199330 - 10199375
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtga 10199375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 502
Target Start/End: Complemental strand, 15515701 - 15515656
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgagaa 502  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||    
T  15515701 gattgacttatttgagcttatctactggcataaacacgtgtgagaa 15515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 9602571 - 9602623
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||| |||||||| ||||| || ||| |||||||||||    
T  9602571 cctatttggattgacttatctgagcttatctactaacttaagcacttgtgaga 9602623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 483
Target Start/End: Original strand, 18403126 - 18403158
Alignment:
Q  451 tatttggattgacttatttgagcttacctactg 483  Q
    |||||||||||||||||||||||||||||||||    
T  18403126 tatttggattgacttatttgagcttacctactg 18403158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 24460322 - 24460370
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||||||    
T  24460322 tttggattgacttatttgaacttatctactgacatgagcacttgtgaga 24460370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 48748516 - 48748564
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||||    
T  48748516 tttgaattgacttatttgagcttatccattgacataaacacttgtgaga 48748564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 2522744 - 2522701
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgt 2522701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 25944585 - 25944542
Alignment:
Q  458 attgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  25944585 attgacttatttgcgcttatttactgacataaacacttgtgaga 25944542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 500
Target Start/End: Complemental strand, 32958782 - 32958739
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||    
T  32958782 gattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 499
Target Start/End: Original strand, 51929378 - 51929429
Alignment:
Q  448 acctatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||| ||||||||||||| |||||||||| |||||||||||| ||| |||||    
T  51929378 acctctttggattgacttttttgagcttatctactgacataagcacctgtga 51929429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 501
Target Start/End: Original strand, 3597196 - 3597250
Alignment:
Q  447 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||| |||||||||||    
T  3597196 gacctgtttggattgacttatttgaggttatctaatgatataaccacttgtgaga 3597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 43420397 - 43420359
Alignment:
Q  463 cttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgaga 43420359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 6279547 - 6279503
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacacttgtg 498  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||    
T  6279547 ttggagtgacttatttcagcttaactactgacataagcacttgtg 6279503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 6659829 - 6659781
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||| |||||| |||||  ||||| |||||||||||    
T  6659829 tttggattgacttattttagcttatctactagcataagcacttgtgaga 6659781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 7217995 - 7218043
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||| |||||| |||| | ||||||||||| |||||    
T  7217995 tttggattgacttatttaagcttatctaccggcataaacacttctgaga 7218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 15558360 - 15558312
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||| ||||||||||||| | |||| | |||||||||||||||    
T  15558360 tttggattgagttatttgagcttatcgactggcttaaacacttgtgaga 15558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 15784945 - 15784897
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||| ||||    
T  15784945 tttggattgacttatttgagcttatttactgtcataaaaacttgcgaga 15784897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 495
Target Start/End: Original strand, 18327065 - 18327109
Alignment:
Q  451 tatttggattgacttatttgagcttacctactgacataaacactt 495  Q
    ||||||||||| |||||||||||||| |||||| ||||| |||||    
T  18327065 tatttggattggcttatttgagcttatctactgtcataagcactt 18327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 28837278 - 28837322
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||||    
T  28837278 gattggcttatttgagcttatctactgacataagcacttgagaga 28837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 492
Target Start/End: Complemental strand, 30257834 - 30257794
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataaaca 492  Q
    ||||||||| ||||||||||| ||| |||||||||||||||    
T  30257834 atttggatttacttatttgagtttatctactgacataaaca 30257794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 493
Target Start/End: Original strand, 30259407 - 30259447
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacac 493  Q
    |||||||||||||||||||| |||||||| | |||||||||    
T  30259407 tttggattgacttatttgagtttacctaccggcataaacac 30259447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 33976327 - 33976279
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||||||  || |||||| | |||||||||||    
T  33976327 tttggattgacttatttgagcttatttaatgacatcagcacttgtgaga 33976279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 34536307 - 34536259
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||| |||||||||||| | || ||| ||||||||||||||||||||    
T  34536307 tttggaatgacttatttgaacgtatctattgacataaacacttgtgaga 34536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 35017727 - 35017683
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| |||||||||||||| ||| || |||||||||||||||||    
T  35017727 gattggcttatttgagcttatctattggcataaacacttgtgaga 35017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 41505823 - 41505787
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  41505823 tttggattggcttatttgagcttatctactgacataa 41505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 44115826 - 44115874
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||| ||||||||| || |||  ||||||||||    
T  44115826 tttggattgacttatttgagtttacctactcacttaagtacttgtgaga 44115874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 48282279 - 48282235
Alignment:
Q  445 aagacctatttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||| ||||| |||||| |||||||||||||||||| |||||    
T  48282279 aagacctgtttgggttgactaatttgagcttacctactggcataa 48282235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 52014036 - 52013988
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||| ||| || ||||||||| |||||||    
T  52014036 tttggattaacttatttgagcttatctattggcataaacacgtgtgaga 52013988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 450 - 498
Target Start/End: Original strand, 32730166 - 32730214
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgtg 498  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  32730166 ctatttcgattgacttatttgagcttacctactgacataaacatttgtg 32730214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 454 - 500
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 495
Target Start/End: Original strand, 47046029 - 47046071
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacactt 495  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046029 tttggattgacttatttgtgcttatctactgacataaacactt 47046071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 490
Target Start/End: Complemental strand, 30812287 - 30812250
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaa 490  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30812287 tttggattgacttatttgagtttacctactgacataaa 30812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 3836598 - 3836650
Alignment:
Q  447 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||||||||| |||||||||||||| |||||| | ||| |||||||||    
T  3836598 gacctatttggattgccttatttgagcttatctactggcttaagcacttgtga 3836650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 8427166 - 8427114
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||| ||||||||||||| ||||| ||||||  ||||||||||    
T  8427166 cctatttggattgatttatttgagcttatctactaacataagtacttgtgaga 8427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 47041960 - 47042008
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||    
T  47041960 tttggattgacttatttgagcatatctattgacattaacacttgtgaga 47042008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 500
Target Start/End: Complemental strand, 1418568 - 1418521
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  1418568 tttggattgacttatttgagcttatctactggcataagcacttatgag 1418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 9210973 - 9210934
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  9210973 ctatttggattgacttatttgagcttatctactgatataa 9210934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 5276639 - 5276594
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtg 498  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||    
T  5276639 tttggattgacttagatgagcttatctactaacataaacacttgtg 5276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 7513708 - 7513663
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtg 498  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  7513708 tttgaattgacttatttgagcttatctactggcataagcacttgtg 7513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 489
Target Start/End: Original strand, 19302479 - 19302520
Alignment:
Q  448 acctatttggattgacttatttgagcttacctactgacataa 489  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  19302479 acctgtttgaattgacttatttgagcttatctactgacataa 19302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 492
Target Start/End: Complemental strand, 46946054 - 46946017
Alignment:
Q  455 tggattgacttatttgagcttacctactgacataaaca 492  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  46946054 tggattgacttatttgagcttagctactggcataaaca 46946017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 11619079 - 11619115
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  11619079 tttggattggcttatttgagcttatctactgacataa 11619115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 12234806 - 12234858
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||| ||||||||| |||||| ||| | ||| |||||||    
T  12234806 cctatttggattgacttagttgagcttatctactggcattagcacgtgtgaga 12234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 23215004 - 23214956
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||| |||| |||||  ||||||||||| |||||    
T  23215004 tttggattgacttatttgaccttatctactagcataaacacttatgaga 23214956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 29363657 - 29363609
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| ||||||||| |||| ||||| |||||| |||||||||||    
T  29363657 tttggattggcttatttgaacttatctactaacataagcacttgtgaga 29363609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 495
Target Start/End: Complemental strand, 31341294 - 31341242
Alignment:
Q  443 taaagacctatttggattgacttatttgagcttacctactgacataaacactt 495  Q
    ||||||| | |||||||||||||||||||||||  |||||  |||||||||||    
T  31341294 taaagacatgtttggattgacttatttgagcttttctacttgcataaacactt 31341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 33266407 - 33266443
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| |||| |||||||    
T  33266407 tttggattgacttatttgagcttatctaccgacataa 33266443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 33673226 - 33673190
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33673226 tttggattgactcatttgagcttatctactgacataa 33673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 496
Target Start/End: Complemental strand, 33871391 - 33871347
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataaacacttg 496  Q
    |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  33871391 attttgattgacttttttgagcttatctacttacataaacacttg 33871347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 40598406 - 40598454
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||| |||||  ||| |||||||| ||||    
T  40598406 tttggattgacttatttgagcttatctactagcatgaacacttgcgaga 40598454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 44289960 - 44290012
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  44289960 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 44290012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 501
Target Start/End: Complemental strand, 1017176 - 1017129
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgaga 1017129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 453 - 516
Target Start/End: Complemental strand, 24193681 - 24193618
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttgg 516  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||  |||| |||||||||    
T  24193681 tttggattgacttatttgagcttatctcctggcataaacacttgtgagttgtgagactatttgg 24193618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 501
Target Start/End: Original strand, 32420976 - 32421027
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32420976 ctatttggattgacttatttgagcttacctactagcataagcacttgtgaga 32421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 451 - 501
Target Start/End: Original strand, 18628472 - 18628522
Alignment:
Q  451 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18628472 tatttagattgacgtatttgagcttatctactgacataaacacttgtgaga 18628522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 18512440 - 18512484
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  18512440 gattaacttatttgagcttatctactgacataaacacttgtgaga 18512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 27043751 - 27043787
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27043751 tttggattgacttatttgagcttatctactgacataa 27043787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 501
Target Start/End: Original strand, 56186803 - 56186867
Alignment:
Q  437 tgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||| || | |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||    
T  56186803 tgaaactaaacacttgtttggattaacttattcgagtttatctactaacataaacacttgtgaga 56186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 22845620 - 22845674
Alignment:
Q  446 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||  ||||||||||    
T  22845620 agacctatttggattggcttatttgagcttatctact-acataagtacttgtgaga 22845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 1075607 - 1075561
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||| |||| |||||||||||||| |||||| |||||||||||||||    
T  1075607 tttgaattggcttatttgagcttatctactggcataaacacttgtga 1075561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 19305077 - 19305027
Alignment:
Q  451 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||| ||| ||| |||||||| || ||||||||    
T  19305077 tatttggattgacttatttgagattatctattgacataagcatttgtgaga 19305027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 28259422 - 28259376
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||||    
T  28259422 tttggactgacttatttgagcttatcaactgacataagcacttgtga 28259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 7367975 - 7368023
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||| ||| |||| | ||||||| |||||||||    
T  7367975 tttggattgacttatttgagtttatctacaggcataaacgcttgtgaga 7368023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 8420948 - 8420908
Alignment:
Q  450 ctatttggattgactta-tttgagcttacctactgacataa 489  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  8420948 ctatttggattgacttagtttgagcttatctactgacataa 8420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 494
Target Start/End: Complemental strand, 10365923 - 10365883
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacact 494  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacact 10365883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 15173224 - 15173260
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  15173224 tttggattgacttatttgaacttatctactgacataa 15173260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 17822786 - 17822822
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  17822786 tttggattaacttatttgagcttatctactgacataa 17822822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 497
Target Start/End: Original strand, 17975258 - 17975302
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||    
T  17975258 tttggattgacttatttgagcttatctaccaacacaaacacttgt 17975302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 19429391 - 19429439
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| ||||||||||||||  |||||  ||||||||||||||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgaga 19429439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 28615483 - 28615435
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||| || ||| |||||  |||||||||||||||||    
T  28615483 tttggattgacttatttaagtttatctactagcataaacacttgtgaga 28615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 32072012 - 32071964
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||| ||||||||||||| ||| ||| |||||||| |||||||||||    
T  32072012 tttggactgacttatttgagtttatctattgacataagcacttgtgaga 32071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 42403944 - 42403980
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| | ||||||||||    
T  42403944 tttggattgacttatttgagcttatcaactgacataa 42403980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 44320098 - 44320050
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||  ||||||||||||||||| || |||||||| ||||||||    
T  44320098 tttggattggtttatttgagcttacctattggcataaacaattgtgaga 44320050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 47146097 - 47146045
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||||| ||||  || || ||||| |||||||||||    
T  47146097 cctatttggattgacttatttgaacttatatattggcataagcacttgtgaga 47146045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 49940088 - 49940124
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||||||||||||||||| || ||||||    
T  49940088 tttggattgacttatttgagcttacctgctaacataa 49940124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 54277248 - 54277292
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||||    
T  54277248 gattgacttatttgaacttatctagtgacataaacacttatgaga 54277292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 55870263 - 55870311
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  55870263 tttggattaacttatttgagtttatctaatgacataaacatttgtgaga 55870311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 22667556 - 22667504
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22667556 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 22724195 - 22724143
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22724195 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22724143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 20210849 - 20210897
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  20210849 tttggattgatttatttgaggttatctactgacataaccacttgtgaga 20210897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 21872216 - 21872264
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| |||||||||| |||| |||||||||||| |||||||||||    
T  21872216 tttggattaacttatttgatcttatctactgacataagcacttgtgaga 21872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 488
Target Start/End: Original strand, 26990146 - 26990181
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacata 488  Q
    |||||||||||||||||||||||| |||||||||||    
T  26990146 tttggattgacttatttgagcttatctactgacata 26990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 41848634 - 41848681
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  41848634 ctatttagattgacttatttgagtttatctactaacataaacacttgt 41848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 500
Target Start/End: Complemental strand, 51929890 - 51929843
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||    
T  51929890 tttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 489
Target Start/End: Original strand, 16072956 - 16072998
Alignment:
Q  447 gacctatttggattgacttatttgagcttacctactgacataa 489  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||    
T  16072956 gacctgtttggattgacttatttgagcttatctaatgacataa 16072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 31512532 - 31512486
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||||||| ||||||||||||||||  ||| |||||||||||    
T  31512532 tttggattgacttgtttgagcttacctactagcatgaacacttgtga 31512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 26911741 - 26911704
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  26911741 atttggattgacttatttgagtttatctactgacataa 26911704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 33965412 - 33965457
Alignment:
Q  456 ggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| |||||||||||| |||||||| ||||||| |||||||    
T  33965412 ggattgacatatttgagcttatctactgacttaaacacatgtgaga 33965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 20173811 - 20173859
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||| || ||| ||| |||| |||||||||||    
T  20173811 tttggattgacttatttgagcgtatctattgaaataagcacttgtgaga 20173859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 499
Target Start/End: Original strand, 24158435 - 24158483
Alignment:
Q  451 tatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||||| ||||||| |||||| ||||||||||||  ||||||||    
T  24158435 tatttggattggcttatttaagcttatctactgacataagtacttgtga 24158483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 25447166 - 25447202
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  25447166 tttggattgacttatttgagtttatctactgacataa 25447202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 32663787 - 32663739
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||||||| |||| |||| | ||||||||||||    
T  32663787 tttggattggcttatttgagcttatctaccgacaaatacacttgtgaga 32663739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 37138431 - 37138383
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||| ||  ||| ||||||||||||||||||||||||    
T  37138431 tttggattggcttattagaatttatctactgacataaacacttgtgaga 37138383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 44014719 - 44014767
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||| ||| |||||  |||||||||||||||||    
T  44014719 tttggattggcttatttgagtttatctactagcataaacacttgtgaga 44014767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 13867027 - 13866979
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  13867027 tttggattgacctatttgagcttatctactgccataaacacttgtgaga 13866979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 22878247 - 22878199
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||    
T  22878247 tttggattgacttatttgagcttatccactgacataagcacttgtgaga 22878199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 43985363 - 43985314
Alignment:
Q  448 acctatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  43985363 acctatttggatcgacttatttaagtttatctactgacataaacacttgt 43985314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 497
Target Start/End: Complemental strand, 3458740 - 3458700
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgt 497  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  3458740 gattgacttatttgagcttacttactggcataaacacttgt 3458700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 15370244 - 15370292
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||| |||||| ||||| || ||||||||    
T  15370244 tttggattgacttatttgagcttatctactggcataagcatttgtgaga 15370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 28803447 - 28803499
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||||||| |||| | ||||| ||| |||||||    
T  28803447 cctatttggattgacttatttgagcttatctaccggcataagcacatgtgaga 28803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 40759309 - 40759261
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  40759309 tttggattgccttatttgagcttatctattgacataagcacttgtgaga 40759261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 493
Target Start/End: Original strand, 40837358 - 40837398
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacac 493  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  40837358 tttggattggcttatttgagcttatctactgacataaacac 40837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 41170759 - 41170711
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  41170759 tttggattggcttatttgagtttatctactaacataaacacttgtgaga 41170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 500
Target Start/End: Original strand, 18525162 - 18525209
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    |||| ||||||||||||||||||| |||| |||||||||||| |||||    
T  18525162 tttgaattgacttatttgagcttatctacagacataaacactcgtgag 18525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 500
Target Start/End: Original strand, 28810373 - 28810420
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  28810373 tttggattgacttatttgagcttctctattggcataaacacttgtgag 28810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 40158870 - 40158819
Alignment:
Q  450 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||| ||||||||||| || ||||||||||||  ||||||||||    
T  40158870 ctatttggattggcttatttgagcatatctactgacataagaacttgtgaga 40158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 29430896 - 29430862
Alignment:
Q  464 ttatttgagcttacctactgacataaacacttgtg 498  Q
    ||||||||||||| |||||||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtg 29430862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 1830188 - 1830143
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtg 498  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||    
T  1830188 tttggattgacttatttgagtttatttactgacataagcacttgtg 1830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 8017583 - 8017538
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtg 498  Q
    |||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  8017583 tttggattgacttatttgaggttatctattgacataagcacttgtg 8017538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 21616580 - 21616629
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||| || ||| | ||||||||||||| ||||||||    
T  21616580 atttggattgacttatttcagtttatccactgacataaacatttgtgaga 21616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 502
Target Start/End: Original strand, 26372648 - 26372697
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgagaa 502  Q
    |||||||||||| ||||||||||| || ||||||||| || |||||||||    
T  26372648 tttggattgactcatttgagcttatcttctgacataagcatttgtgagaa 26372697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 490
Target Start/End: Original strand, 41516949 - 41516982
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaa 490  Q
    |||||||||||||||||||||||||| |||||||    
T  41516949 gattgacttatttgagcttacctactcacataaa 41516982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 497
Target Start/End: Original strand, 3078529 - 3078573
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||    
T  3078529 tttggattgacttatttgagcttatctaccaacacaaacacttgt 3078573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 18179098 - 18179062
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  18179098 tttggattgacttatttgagcttatctactaacataa 18179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 27317528 - 27317492
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| |||| |||||||    
T  27317528 tttggattgacttatttgagcttatctaccgacataa 27317492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 30331900 - 30331864
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  30331900 tttggattgacttatttcagcttatctactgacataa 30331864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 35329739 - 35329787
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||| |||||||| |||||  |||||||||| ||||||    
T  35329739 tttggattgacttatgtgagcttatctactaccataaacactagtgaga 35329787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 40059382 - 40059418
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  40059382 tttggattgacttatttgagtttatctactgacataa 40059418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 40085282 - 40085318
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  40085282 tttggattgacttatttgagtttatctactgacataa 40085318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 40851747 - 40851699
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||| |||||  | |||||||||||| ||||||||    
T  40851747 tttggattgacttatttgcgcttaattgctgacataaacaattgtgaga 40851699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 453 - 500
Target Start/End: Complemental strand, 4560651 - 4560604
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgag 500  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  4560651 tttggattgacttatttgagcttatctattgacataagcacttgtgag 4560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 10560194 - 10560147
Alignment:
Q  455 tggattgacttatttgagcttacctactgacataaacacttgtgagaa 502  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  10560194 tggattgacttagttgagcttatctactgacataaacatttgtgagaa 10560147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 432 - 497
Target Start/End: Complemental strand, 34291039 - 34290974
Alignment:
Q  432 aattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||| |||||||| || ||||||| ||||||||| |||||| | | ||||||||||||||||||||    
T  34291039 aattttgaaactagaggcctatttcgattgacttgtttgagttcatctactgacataaacacttgt 34290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 497
Target Start/End: Complemental strand, 1821982 - 1821934
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1821982 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1821934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 497
Target Start/End: Complemental strand, 1856427 - 1856379
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1856427 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1856379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 7714391 - 7714343
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||||||  || || |||||||||||||||||    
T  7714391 tttggattgacttatttgagcttatataatgtcataaacacttgtgaga 7714343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 9700150 - 9700102
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  9700150 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 9700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 18331863 - 18331815
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||||||||    
T  18331863 tttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 499
Target Start/End: Original strand, 22705031 - 22705079
Alignment:
Q  451 tatttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||||| |||| |||||||||||||||||| | ||||||||||||||||    
T  22705031 tatttgaattggcttatttgagcttacctattaacataaacacttgtga 22705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 38602476 - 38602440
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    |||||||||||||||||||||||| ||||||||||||    
T  38602476 tttggattgacttatttgagcttatctactgacataa 38602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 2606198 - 2606152
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||||||||||||||| ||||||| |||||||||||| |||| ||||    
T  2606198 tttggattgacttattcgagcttatctactgacataatcactagtga 2606152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 8060817 - 8060775
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacactt 495  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  8060817 tttggattgacttatttgagcatatctattgacataaacactt 8060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 501
Target Start/End: Original strand, 43368615 - 43368669
Alignment:
Q  447 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||| || ||||||||    
T  43368615 gacctgtttggattgacttatttgatcttatctactaacataagcatttgtgaga 43368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 501
Target Start/End: Complemental strand, 1561427 - 1561378
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||| |||||||| |||| ||| || |||||||||||||||||    
T  1561427 atttggattgatttatttgatcttatctaatggcataaacacttgtgaga 1561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 6950468 - 6950423
Alignment:
Q  456 ggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgaga 6950423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 1892149 - 1892193
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||| ||| |||| | |||||||||||||||||    
T  1892149 gattgacttatttgagtttatctaccgtcataaacacttgtgaga 1892193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 2487929 - 2487977
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||| | | |||||||||||| |||||||||||    
T  2487929 tttggattggcttatttgagttcatctactgacataagcacttgtgaga 2487977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 7008747 - 7008699
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||| ||||||||||||||| ||| |||||| ||||| |||||||||||    
T  7008747 tttgaattgacttatttgagtttatctactggcataagcacttgtgaga 7008699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 10488612 - 10488564
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||||||| | ||| |||||||||| |||||||    
T  10488612 tttggattggcttatttgagcttatcaactaacataaacacatgtgaga 10488564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 14926903 - 14926951
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||| ||||  ||||| ||||| |||||||||||    
T  14926903 tttggattgacttatttgaacttatttactggcataagcacttgtgaga 14926951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 16162909 - 16162861
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| |||||||||| ||| |||||  |||||||||||||||||    
T  16162909 tttggattggcttatttgagtttatctactagcataaacacttgtgaga 16162861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 20186381 - 20186433
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  20186381 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 20186433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 20205448 - 20205500
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  20205448 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 20205500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 29168776 - 29168824
Alignment:
Q  447 gacctatttggattgacttatttgagcttacctactgacataaacactt 495  Q
    |||||||||| ||||||| |||||||||||||||||  ||||| |||||    
T  29168776 gacctatttgtattgactgatttgagcttacctactagcataagcactt 29168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 30251375 - 30251411
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  30251375 tttggattggcttatttgagcttatctactgacataa 30251411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 497
Target Start/End: Complemental strand, 32976522 - 32976478
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgt 497  Q
    ||||||||  |||||||||||||| |||||||||||| |||||||    
T  32976522 tttggattcccttatttgagcttatctactgacataagcacttgt 32976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 39881646 - 39881690
Alignment:
Q  457 gattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgaga 39881690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 43393689 - 43393741
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||||||||| |||||| |||||  || |||||||| |||||    
T  43393689 cctatttggattgacttatttaagcttatctacttgcaaaaacacttttgaga 43393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 43717851 - 43717891
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  43717851 cctatttggattggcttatttgagcttatctattgacataa 43717891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 13908389 - 13908343
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||    
T  13908389 tttgaattgacttatttgaacttatctactgacataaacacttgtga 13908343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 499
Target Start/End: Original strand, 31776193 - 31776239
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  31776193 tttggattgacttatttgagcttatctactgatatatacacttgtga 31776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 8420117 - 8420166
Alignment:
Q  453 tttggattgactt-atttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  8420117 tttggattgactttatttgagcttatctattgacataaacacttgtgaga 8420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 12111120 - 12111068
Alignment:
Q  449 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||||||| |||||  ||||| |||||| ||||    
T  12111120 cctatttggattgacttatttgagcttatctactagcataagcacttgcgaga 12111068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 6742955 - 6742912
Alignment:
Q  458 attgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||||||||||||||||  ||||| |||||||||||    
T  6742955 attgacttatttgagcttacctactagcataatcacttgtgaga 6742912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 7351597 - 7351640
Alignment:
Q  458 attgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||    
T  7351597 attgacttatttgagtttatctactgacataagcacttgtgaga 7351640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 501
Target Start/End: Original strand, 2732160 - 2732216
Alignment:
Q  447 gacctatttggattgacttattt--gagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||  ||||||  |||||||||||| |||||||||||    
T  2732160 gacctattgggattgacttatttgagagcttgtctactgacataagcacttgtgaga 2732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 17241082 - 17241127
Alignment:
Q  454 ttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||| ||||||||||| |||  |||||||||||||||||||||    
T  17241082 ttggatttacttatttgagtttatatactgacataaacacttgtga 17241127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 26559159 - 26559208
Alignment:
Q  452 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||| ||||||||||| |||||||||| ||||| || ||||||||    
T  26559159 atttggattaacttatttgagtttacctactggcataagcatttgtgaga 26559208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 738462 - 738510
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| ||||||||    
T  738462 tttggattaacttatttgagcttatctattgagataaacatttgtgaga 738510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 499
Target Start/End: Complemental strand, 3750136 - 3750100
Alignment:
Q  463 cttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  3750136 cttatctgagcttatctactgacataaacacttgtga 3750100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 4325226 - 4325274
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||||| |||| || ||| ||||| ||||||||||||||||||    
T  4325226 tttggattgactaattttagtttatctactaacataaacacttgtgaga 4325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 8010506 - 8010458
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    ||||||||||||||| |||||||| ||| || |||||||| ||||||||    
T  8010506 tttggattgacttatgtgagcttatctattggcataaacatttgtgaga 8010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 10016772 - 10016724
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 501  Q
    |||||||||  ||||||||||||| |||| | |||||||||||||||||    
T  10016772 tttggattggtttatttgagcttatctacaggcataaacacttgtgaga 10016724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 20861619 - 20861655
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  20861619 tttggattgtcttatttgagcttacctactggcataa 20861655  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 21405075 - 21405111
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataa 489  Q
    ||||||||||||||||||||||||  |||||||||||    
T  21405075 tttggattgacttatttgagcttatatactgacataa 21405111  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Original strand, 159894 - 159940
Alignment:
Q  453 tttggattgacttatttgagcttacctactgacataaacacttgtga 499  Q
    ||||||||| |||||||||||||| ||||| | ||||||||||||||    
T  159894 tttggattggcttatttgagcttatctactaatataaacacttgtga 159940  T

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