View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15458_low_15 (Length: 322)

Name: NF15458_low_15
Description: NF15458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15458_low_15
NF15458_low_15
[»] chr3 (41 HSPs)
chr3 (17-322)||(45272568-45272873)
chr3 (270-322)||(30807305-30807357)
chr3 (270-322)||(35492904-35492956)
chr3 (270-322)||(46576341-46576393)
chr3 (271-322)||(30257618-30257669)
chr3 (271-322)||(34492727-34492778)
chr3 (271-322)||(45529906-45529957)
chr3 (273-322)||(53424328-53424377)
chr3 (270-322)||(21362936-21362988)
chr3 (270-322)||(40940818-40940870)
chr3 (271-322)||(8456302-8456353)
chr3 (271-322)||(25289866-25289917)
chr3 (271-322)||(31537990-31538041)
chr3 (271-322)||(40133601-40133652)
chr3 (271-322)||(48977382-48977433)
chr3 (271-322)||(50582986-50583037)
chr3 (276-322)||(25379760-25379806)
chr3 (272-322)||(52455801-52455851)
chr3 (270-322)||(49258414-49258466)
chr3 (271-322)||(4252548-4252599)
chr3 (271-322)||(7485677-7485728)
chr3 (270-320)||(4462626-4462676)
chr3 (271-321)||(18177040-18177090)
chr3 (274-322)||(25344209-25344257)
chr3 (278-322)||(26174114-26174158)
chr3 (270-322)||(32151418-32151469)
chr3 (271-322)||(7470367-7470418)
chr3 (271-322)||(9842915-9842966)
chr3 (271-322)||(15566651-15566701)
chr3 (271-322)||(19857047-19857096)
chr3 (271-322)||(55287797-55287848)
chr3 (284-322)||(26108299-26108337)
chr3 (276-322)||(52821787-52821833)
chr3 (269-322)||(29915421-29915474)
chr3 (269-322)||(29964574-29964627)
chr3 (275-322)||(36660768-36660815)
chr3 (276-322)||(11390601-11390647)
chr3 (272-322)||(16140292-16140342)
chr3 (292-322)||(53234062-53234092)
chr3 (294-322)||(10083971-10083999)
chr3 (294-322)||(10190894-10190922)
[»] chr6 (23 HSPs)
chr6 (270-322)||(33499467-33499519)
chr6 (270-322)||(22576060-22576112)
chr6 (271-322)||(9238969-9239020)
chr6 (271-322)||(12591631-12591682)
chr6 (271-322)||(15360250-15360301)
chr6 (270-321)||(34147339-34147390)
chr6 (270-321)||(34159955-34160006)
chr6 (271-320)||(5360225-5360274)
chr6 (270-322)||(3222786-3222838)
chr6 (271-322)||(13753234-13753285)
chr6 (269-320)||(21148664-21148715)
chr6 (277-322)||(11448871-11448916)
chr6 (273-322)||(21982472-21982521)
chr6 (269-322)||(28672059-28672112)
chr6 (274-322)||(9843935-9843983)
chr6 (270-322)||(11007158-11007210)
chr6 (273-322)||(8479308-8479357)
chr6 (270-322)||(9208245-9208297)
chr6 (271-322)||(654298-654349)
chr6 (271-322)||(17081206-17081257)
chr6 (268-322)||(14212883-14212937)
chr6 (271-317)||(33718615-33718661)
chr6 (294-322)||(28968194-28968222)
[»] chr5 (47 HSPs)
chr5 (268-322)||(13108601-13108655)
chr5 (270-322)||(32059592-32059644)
chr5 (271-322)||(22392695-22392746)
chr5 (271-322)||(25586926-25586977)
chr5 (268-322)||(13038606-13038660)
chr5 (271-321)||(23270675-23270725)
chr5 (269-322)||(4603769-4603822)
chr5 (274-322)||(8484813-8484861)
chr5 (270-322)||(11926654-11926706)
chr5 (270-322)||(15641257-15641309)
chr5 (274-322)||(38631113-38631161)
chr5 (271-322)||(12317302-12317353)
chr5 (271-322)||(31288098-31288149)
chr5 (272-322)||(36954813-36954863)
chr5 (271-320)||(15931053-15931102)
chr5 (269-322)||(33025472-33025525)
chr5 (265-322)||(33709653-33709709)
chr5 (270-322)||(1827682-1827734)
chr5 (274-322)||(25750763-25750811)
chr5 (270-322)||(27498883-27498935)
chr5 (271-322)||(3715061-3715112)
chr5 (271-322)||(30485822-30485873)
chr5 (271-322)||(34049816-34049867)
chr5 (271-322)||(34310136-34310187)
chr5 (273-322)||(19145563-19145612)
chr5 (271-322)||(7085778-7085829)
chr5 (275-322)||(15971274-15971321)
chr5 (271-322)||(37397707-37397758)
chr5 (271-322)||(38684202-38684253)
chr5 (275-321)||(42006791-42006837)
chr5 (270-322)||(11465059-11465111)
chr5 (270-322)||(16616112-16616164)
chr5 (274-322)||(22253297-22253345)
chr5 (271-322)||(5067295-5067346)
chr5 (281-320)||(6014434-6014473)
chr5 (279-322)||(10869717-10869760)
chr5 (274-321)||(27487708-27487755)
chr5 (272-322)||(40330628-40330678)
chr5 (270-320)||(42193478-42193528)
chr5 (274-322)||(930637-930685)
chr5 (294-322)||(7151346-7151374)
chr5 (294-322)||(12398600-12398628)
chr5 (271-322)||(15485443-15485495)
chr5 (271-315)||(19230469-19230513)
chr5 (294-322)||(19456361-19456389)
chr5 (270-322)||(21042677-21042729)
chr5 (269-313)||(25343231-25343275)
[»] chr8 (36 HSPs)
chr8 (269-322)||(4718641-4718694)
chr8 (271-322)||(2618184-2618235)
chr8 (271-322)||(3734775-3734826)
chr8 (271-322)||(18532105-18532156)
chr8 (271-322)||(34237807-34237858)
chr8 (272-322)||(19471608-19471658)
chr8 (272-322)||(19542532-19542582)
chr8 (272-322)||(19590114-19590164)
chr8 (270-322)||(20305905-20305957)
chr8 (270-322)||(21092538-21092590)
chr8 (270-322)||(28193471-28193523)
chr8 (270-322)||(42643270-42643322)
chr8 (271-322)||(39349254-39349305)
chr8 (272-317)||(42328004-42328049)
chr8 (274-322)||(27746487-27746535)
chr8 (271-322)||(7558095-7558146)
chr8 (271-322)||(26169000-26169051)
chr8 (274-322)||(8042655-8042703)
chr8 (276-322)||(264551-264597)
chr8 (276-322)||(651324-651370)
chr8 (276-322)||(837059-837105)
chr8 (274-322)||(15259558-15259606)
chr8 (274-322)||(34639358-34639406)
chr8 (274-322)||(34694728-34694776)
chr8 (270-321)||(3403655-3403706)
chr8 (271-322)||(24018380-24018431)
chr8 (271-318)||(28088284-28088331)
chr8 (271-318)||(32879277-32879324)
chr8 (274-320)||(8387598-8387644)
chr8 (284-322)||(21603241-21603279)
chr8 (273-322)||(28964033-28964082)
chr8 (279-320)||(41070767-41070808)
chr8 (271-320)||(2166695-2166746)
chr8 (294-322)||(14632975-14633003)
chr8 (274-322)||(21667551-21667599)
chr8 (274-322)||(36848901-36848949)
[»] scaffold0199 (1 HSPs)
scaffold0199 (270-322)||(8559-8611)
[»] chr7 (47 HSPs)
chr7 (270-322)||(18044104-18044156)
chr7 (266-322)||(40543062-40543118)
chr7 (271-322)||(2344297-2344348)
chr7 (271-322)||(2751269-2751320)
chr7 (271-322)||(7176014-7176065)
chr7 (271-322)||(7275275-7275326)
chr7 (271-322)||(21217985-21218036)
chr7 (271-322)||(23854394-23854445)
chr7 (272-322)||(2103054-2103104)
chr7 (268-322)||(10091183-10091237)
chr7 (270-322)||(27312149-27312201)
chr7 (275-322)||(13332575-13332622)
chr7 (271-322)||(17212051-17212102)
chr7 (275-322)||(22119890-22119937)
chr7 (270-321)||(27009356-27009407)
chr7 (271-322)||(31713047-31713098)
chr7 (272-322)||(7799984-7800034)
chr7 (271-321)||(31197589-31197639)
chr7 (271-320)||(25333417-25333466)
chr7 (274-322)||(28089817-28089865)
chr7 (271-322)||(11997847-11997898)
chr7 (271-322)||(21370595-21370646)
chr7 (271-322)||(32849589-32849640)
chr7 (271-322)||(42913665-42913716)
chr7 (272-322)||(19421230-19421280)
chr7 (269-322)||(39145804-39145857)
chr7 (274-322)||(8435847-8435895)
chr7 (274-322)||(12211687-12211735)
chr7 (270-322)||(17197102-17197154)
chr7 (274-322)||(21835152-21835200)
chr7 (275-322)||(28003838-28003885)
chr7 (275-321)||(577681-577727)
chr7 (272-322)||(21574255-21574305)
chr7 (275-320)||(23012662-23012707)
chr7 (287-322)||(22299863-22299898)
chr7 (271-322)||(40332097-40332148)
chr7 (271-322)||(43785451-43785502)
chr7 (271-321)||(22638290-22638340)
chr7 (292-322)||(22703505-22703535)
chr7 (272-322)||(23330891-23330941)
chr7 (271-321)||(33137949-33137998)
chr7 (276-322)||(42814867-42814913)
chr7 (271-320)||(28646967-28647016)
chr7 (275-322)||(3951142-3951190)
chr7 (274-322)||(9683827-9683875)
chr7 (274-322)||(9718139-9718187)
chr7 (270-322)||(22696317-22696369)
[»] chr2 (31 HSPs)
chr2 (266-322)||(18976577-18976633)
chr2 (270-322)||(11941362-11941414)
chr2 (271-322)||(33827725-33827776)
chr2 (271-322)||(44946205-44946256)
chr2 (272-322)||(8192503-8192553)
chr2 (271-322)||(15037953-15038004)
chr2 (271-322)||(27269502-27269553)
chr2 (271-322)||(32845085-32845136)
chr2 (275-322)||(44976306-44976353)
chr2 (269-318)||(30466986-30467035)
chr2 (274-322)||(4567589-4567637)
chr2 (270-322)||(6714433-6714485)
chr2 (270-322)||(24195997-24196049)
chr2 (270-322)||(41313985-41314037)
chr2 (275-322)||(17324764-17324811)
chr2 (271-322)||(25293160-25293211)
chr2 (268-322)||(4852549-4852603)
chr2 (270-310)||(20297556-20297596)
chr2 (275-322)||(918851-918898)
chr2 (279-322)||(4618837-4618880)
chr2 (287-322)||(27290598-27290633)
chr2 (292-322)||(10582142-10582172)
chr2 (271-309)||(36390731-36390769)
chr2 (272-322)||(40997502-40997552)
chr2 (276-322)||(41329842-41329888)
chr2 (293-322)||(1845809-1845838)
chr2 (273-322)||(19054021-19054070)
chr2 (293-322)||(34516560-34516589)
chr2 (271-322)||(28194285-28194337)
chr2 (270-322)||(32526237-32526289)
chr2 (294-322)||(43374477-43374505)
[»] chr1 (39 HSPs)
chr1 (270-322)||(8077640-8077692)
chr1 (270-322)||(24674386-24674438)
chr1 (271-322)||(4621389-4621440)
chr1 (271-322)||(7197398-7197449)
chr1 (271-322)||(34778336-34778387)
chr1 (270-322)||(27455018-27455070)
chr1 (271-322)||(15059554-15059605)
chr1 (271-322)||(32729539-32729590)
chr1 (271-322)||(46607804-46607855)
chr1 (271-322)||(47091684-47091735)
chr1 (271-320)||(29057491-29057540)
chr1 (273-321)||(1818730-1818778)
chr1 (270-322)||(7766879-7766931)
chr1 (271-318)||(14258583-14258630)
chr1 (271-321)||(168195-168245)
chr1 (276-322)||(46113554-46113600)
chr1 (270-322)||(1138572-1138624)
chr1 (270-322)||(24122016-24122068)
chr1 (272-315)||(1486415-1486458)
chr1 (275-322)||(2272342-2272389)
chr1 (271-322)||(6776139-6776189)
chr1 (271-322)||(20487342-20487393)
chr1 (271-322)||(30677170-30677221)
chr1 (270-321)||(40802220-40802271)
chr1 (274-321)||(52135127-52135174)
chr1 (271-321)||(23232418-23232468)
chr1 (272-322)||(24216973-24217023)
chr1 (269-310)||(2537696-2537737)
chr1 (270-322)||(809215-809267)
chr1 (270-322)||(7946837-7946889)
chr1 (270-322)||(25496640-25496692)
chr1 (276-315)||(1095154-1095193)
chr1 (271-322)||(1378892-1378943)
chr1 (270-320)||(18646846-18646896)
chr1 (292-322)||(37351613-37351643)
chr1 (270-322)||(18533876-18533928)
chr1 (270-322)||(23734109-23734161)
chr1 (270-322)||(23741301-23741353)
chr1 (294-322)||(33905662-33905690)
[»] scaffold0576 (1 HSPs)
scaffold0576 (271-322)||(5234-5285)
[»] chr4 (34 HSPs)
chr4 (271-322)||(25852208-25852259)
chr4 (271-322)||(32986191-32986242)
chr4 (271-322)||(40059004-40059055)
chr4 (271-322)||(46714386-46714437)
chr4 (271-322)||(54127494-54127545)
chr4 (271-321)||(5609355-5609405)
chr4 (270-322)||(19660684-19660736)
chr4 (274-322)||(20566346-20566394)
chr4 (270-322)||(33696431-33696483)
chr4 (271-322)||(1985830-1985881)
chr4 (271-322)||(52983613-52983664)
chr4 (272-322)||(13873447-13873497)
chr4 (271-321)||(35674894-35674944)
chr4 (268-322)||(41621748-41621802)
chr4 (271-322)||(22625222-22625273)
chr4 (271-322)||(27528947-27528998)
chr4 (271-322)||(34722164-34722215)
chr4 (271-322)||(34844910-34844961)
chr4 (271-321)||(13771636-13771686)
chr4 (281-322)||(35229172-35229213)
chr4 (277-322)||(55961894-55961939)
chr4 (271-322)||(33992620-33992671)
chr4 (275-322)||(34835527-34835574)
chr4 (275-322)||(42245744-42245791)
chr4 (275-322)||(51535611-51535658)
chr4 (270-322)||(44343506-44343559)
chr4 (275-322)||(43719217-43719264)
chr4 (275-322)||(45787856-45787902)
chr4 (276-322)||(32942369-32942415)
chr4 (270-316)||(36131668-36131714)
chr4 (294-322)||(7392115-7392143)
chr4 (278-318)||(10125783-10125823)
chr4 (274-322)||(13550205-13550253)
chr4 (274-322)||(13584406-13584454)
[»] scaffold0068 (1 HSPs)
scaffold0068 (270-322)||(41796-41848)
[»] scaffold0623 (1 HSPs)
scaffold0623 (275-322)||(1208-1255)
[»] scaffold0459 (1 HSPs)
scaffold0459 (275-322)||(10845-10892)
[»] scaffold0366 (2 HSPs)
scaffold0366 (275-322)||(9451-9498)
scaffold0366 (275-322)||(12152-12199)
[»] scaffold0328 (1 HSPs)
scaffold0328 (271-322)||(14985-15036)
[»] scaffold0070 (1 HSPs)
scaffold0070 (271-322)||(40319-40370)
[»] scaffold0026 (1 HSPs)
scaffold0026 (271-322)||(97518-97569)
[»] scaffold0051 (1 HSPs)
scaffold0051 (272-322)||(53023-53073)
[»] scaffold0217 (1 HSPs)
scaffold0217 (271-322)||(7461-7512)
[»] scaffold0049 (1 HSPs)
scaffold0049 (271-322)||(66756-66807)
[»] scaffold0200 (1 HSPs)
scaffold0200 (271-320)||(26697-26746)
[»] scaffold0460 (1 HSPs)
scaffold0460 (271-322)||(8331-8382)
[»] scaffold0028 (1 HSPs)
scaffold0028 (271-322)||(27770-27821)
[»] scaffold0240 (1 HSPs)
scaffold0240 (268-322)||(12906-12960)
[»] scaffold0717 (1 HSPs)
scaffold0717 (282-321)||(111-150)


Alignment Details
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 17 - 322
Target Start/End: Complemental strand, 45272873 - 45272568
Alignment:
Q  17 attacattgaggccacggagagaaaagagcaagcattacgtgacaagcgtgtaaatgacaaacaacaaggtgagaaagaggatgaacctattgtcgtgca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45272873 attacattgaggccacggagagaaaagagcaagcattacgtgatacgcgtgtaaatgacaaacaacaaggtgagaaagaggatgaacctattgtcgtgca 45272774  T
Q  117 ctacaagtcacacagttgtgaaagtgatgaaagtgcgacatctgaatcagagaacactgacaactcaaacgaggtaattaaatcgttttcagttcatttg 216  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45272773 ctacaagtcacacagttgtgaaagtgatgaaagtgtgacatctgaatcagagaacactgacaactcaaacgaggtaattaaatcgttttcagttcatttg 45272674  T
Q  217 attgatttccctaccctataatctttatgtttagttataagcgtgaggcaatgtaacccatttggggttggcctggtggttggcttgggatcttggagtt 316  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  45272673 attgatttccctaccctataatctatatgtttagttataagcatgaggcaatgtaacccatttggggttggcctagtcgttggcttgggatcttggagtt 45272574  T
Q  317 tgctcc 322  Q
    ||||||    
T  45272573 tgctcc 45272568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 30807357 - 30807305
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30807357 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 30807305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 35492904 - 35492956
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35492904 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 35492956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 46576341 - 46576393
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46576341 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 46576393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 30257618 - 30257669
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30257618 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 30257669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 34492778 - 34492727
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 34492727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 45529957 - 45529906
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45529957 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 45529906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 53424377 - 53424328
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  53424377 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 53424328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 21362936 - 21362988
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  21362936 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcc 21362988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 40940818 - 40940870
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  40940818 taacccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 40940870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 8456353 - 8456302
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcc 8456302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 25289917 - 25289866
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 25289866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 31538041 - 31537990
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcc 31537990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 40133652 - 40133601
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  40133652 aacccatttggggttggcctagtggttggcttgggattttggagtttgctcc 40133601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 48977382 - 48977433
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  48977382 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcc 48977433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 50582986 - 50583037
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  50582986 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcc 50583037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 25379760 - 25379806
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcc 25379806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 52455851 - 52455801
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagtttgctcc 52455801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 49258466 - 49258414
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  49258466 taacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcc 49258414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 4252599 - 4252548
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  4252599 aacccatttggggttggcctagtggttggcttgagatcttggagtgtgctcc 4252548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7485728 - 7485677
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  7485728 aacccatttggggttggcatagtggttgacttgggatcttggagtttgctcc 7485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 4462626 - 4462676
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  4462626 taactcatttggggttggcctagtggttggcttgagatcttggagtttgct 4462676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 18177090 - 18177040
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  18177090 aacccatttggggttggcctagtggttgacttgagatcttggagtttgctc 18177040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 25344257 - 25344209
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  25344257 ccatttggggttggcctagtggttgacttgggatcttcgagtttgctcc 25344209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 26174114 - 26174158
Alignment:
Q  278 ttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  26174114 ttggagttggcctagtggttggcttgggatcttggagtttgctcc 26174158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 32151418 - 32151469
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  32151418 taacccatttggg-ttggcctagtggttgacttgggatcttggagtttgctcc 32151469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7470418 - 7470367
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| |||| ||||||| |||| ||||||||||||||||||    
T  7470418 aacccatttggggtttgcctagtggttgacttgagatcttggagtttgctcc 7470367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 9842915 - 9842966
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||| ||||    
T  9842915 aacccatttggggttggtctagtggttggtttgggatcttggagttttctcc 9842966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 15566701 - 15566651
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  15566701 aacccatttggg-ttggcctagtggttggcttgagatcttggagtttgctcc 15566651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 19857047 - 19857096
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19857047 aacccatttggg-ttggcctggtggttggctt-ggatcttggagtttgctcc 19857096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 55287797 - 55287848
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| | ||||||||||||| ||||| |||||||||||    
T  55287797 aacccatttggggttggcatagtggttggcttggaatcttagagtttgctcc 55287848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 26108299 - 26108337
Alignment:
Q  284 ttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcc 26108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 52821833 - 52821787
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtttgctcc 52821787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 29915474 - 29915421
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||| |||||| |||  |||||| |||||||||||||||||||||||    
T  29915474 gtaacccatttagggttgacctaatggttgacttgggatcttggagtttgctcc 29915421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 29964627 - 29964574
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||| |||||| |||  |||||| |||||||||||||||||||||||    
T  29964627 gtaacccatttagggttgacctaatggttgacttgggatcttggagtttgctcc 29964574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 36660768 - 36660815
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||| |||||||| || |||||||||||||||||||    
T  36660768 catttggggttgacctagtggttggtttaggatcttggagtttgctcc 36660815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 11390601 - 11390647
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| ||||    
T  11390601 atttggggttggcctagtggttggtttgagatcttggagttttctcc 11390647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 16140292 - 16140342
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| ||| || | |||||||||||||| |||||||    
T  16140292 acccatttggggttggcctagtgattagtttgggatcttggagcttgctcc 16140342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 53234092 - 53234062
Alignment:
Q  292 gtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||||    
T  53234092 gtggttggcttgggatcttggagtttgctcc 53234062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 10083999 - 10083971
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  10083999 ggttggcttgggatcttggagtttgctcc 10083971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 10190922 - 10190894
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  10190922 ggttggcttgggatcttggagtttgctcc 10190894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 33499467 - 33499519
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33499467 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 33499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 22576060 - 22576112
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22576060 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 22576112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 9238969 - 9239020
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9238969 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 9239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 12591631 - 12591682
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 12591682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 15360301 - 15360250
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15360301 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 15360250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 34147339 - 34147390
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34147339 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 34147390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 34159955 - 34160006
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34159955 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 34160006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 5360274 - 5360225
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5360274 aacccatttggagttggcctggtggttggcttgggatcttggagtttgct 5360225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 3222838 - 3222786
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  3222838 taacccatttggggttggcctagtggttggcttgggatcttgcagtttgctcc 3222786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 13753234 - 13753285
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13753234 aacccatttggggttggcctagtggttggctttggatcttggagtttgctcc 13753285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 21148715 - 21148664
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  21148715 gtaacccatttggagttggcctagtggttggcttgggatcttggagtttgct 21148664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 11448871 - 11448916
Alignment:
Q  277 tttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcc 11448916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 21982521 - 21982472
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  21982521 cccatttggggttggcctagtggttggcttgggatcttgaagtttgctcc 21982472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 28672059 - 28672112
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  28672059 gtaacccatttggggttggcctagtggttgacttgagatcttggagtttgctcc 28672112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 9843935 - 9843983
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||    
T  9843935 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 9843983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 11007158 - 11007210
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  11007158 taacccatttggggttgatctagtggttggcttgggatcttggagtttgctcc 11007210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 8479308 - 8479357
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  8479308 cccatttggggttggcctagtggttgacttgggatcttggagtgtgctcc 8479357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 9208245 - 9208297
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||  || |||||||| ||||||||||||||||||||||    
T  9208245 taacccatttggggttgttctagtggttggattgggatcttggagtttgctcc 9208297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 654349 - 654298
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||||| |||| || |||||||||||||||||||||||    
T  654349 aacccatttgggtttggcctagtggctgacttgggatcttggagtttgctcc 654298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 17081257 - 17081206
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| |||| | || ||||||||||| |||||||||||||||||||    
T  17081257 aacccatttgaggttagtctagtggttggcttaggatcttggagtttgctcc 17081206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 14212883 - 14212937
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||||| ||| |||  ||||||||| ||||||||||||||||||||    
T  14212883 tgtaactcatttgggattgacctaatggttggctcgggatcttggagtttgctcc 14212937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 33718661 - 33718615
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagttt 317  Q
    ||||||||| ||||||| || |||||||| |||||||||||||||||    
T  33718661 aacccatttagggttggtctagtggttggtttgggatcttggagttt 33718615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 28968222 - 28968194
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  28968222 ggttggcttgggatcttggagtttgctcc 28968194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 13108655 - 13108601
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13108655 tgtaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 13108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 32059644 - 32059592
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32059644 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 32059592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 22392695 - 22392746
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 22392746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 25586926 - 25586977
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25586926 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 25586977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 13038660 - 13038606
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13038660 tgtaacccatttggggttggcctagtggttggtttgggatcttggagtttgctcc 13038606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 23270725 - 23270675
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23270725 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 23270675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 4603769 - 4603822
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4603769 gtaatccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 4603822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 8484861 - 8484813
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8484861 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 8484813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 11926706 - 11926654
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11926706 taacccatttggggttggcctagtggttggtttgggatcttggagtttgctcc 11926654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 15641309 - 15641257
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  15641309 taacccatttggggttagcctagtggttggcttgggatcttggagtttgctcc 15641257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 38631161 - 38631113
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38631161 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 38631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 12317353 - 12317302
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  12317353 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcc 12317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 31288149 - 31288098
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  31288149 aacccattttgggttggcctagtggttggcttgggatcttggagtttgctcc 31288098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 36954813 - 36954863
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  36954813 acccatttggggttggcctagtggttgccttgggatcttggagtttgctcc 36954863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 15931053 - 15931102
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  15931053 aacccatttggggttggcctagtggttagcttgggatcttggagtttgct 15931102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 33025472 - 33025525
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  33025472 gtaacccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcc 33025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 33709709 - 33709653
Alignment:
Q  265 caatgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  33709709 caatttaacccatttggg-ttggcctagtggttggcttgggatcttggagtttgctcc 33709653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 1827734 - 1827682
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  1827734 taacccatttggggttgacctagtggttggcttgagatcttggagtttgctcc 1827682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 25750811 - 25750763
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  25750811 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcc 25750763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 27498935 - 27498883
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  27498935 taacccatttggggttgacctagtggttggcttggaatcttggagtttgctcc 27498883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 3715112 - 3715061
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3715112 aaccaatttggggttggcctagtggttggtttgggatcttggagtttgctcc 3715061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 30485822 - 30485873
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtttgctcc 30485873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 34049816 - 34049867
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  34049816 aacccatttggggttgggctagtagttggcttgggatcttggagtttgctcc 34049867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 34310136 - 34310187
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagtttgctcc 34310187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 19145612 - 19145563
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  19145612 cccatttggggttggcctagtggttgacttgggatcttggagtatgctcc 19145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7085829 - 7085778
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||| ||||    
T  7085829 aacccatttggggctggcttagtggttggcttgggatcttggagttttctcc 7085778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 15971321 - 15971274
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||    
T  15971321 catttagggttggcttagtggttggcttgggatcttggagtttgctcc 15971274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 37397707 - 37397758
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||| || |||||||||||| ||||||||||||||||||    
T  37397707 aacctatttggggttggtctagtggttggcttgtgatcttggagtttgctcc 37397758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 38684202 - 38684253
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  38684202 aacccacttggggttggcccagtggttgacttgggatcttggagtttgctcc 38684253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 42006791 - 42006837
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||    
T  42006791 catttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 11465111 - 11465059
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| |||||||||| ||| ||||||||  |||||||||||||||||    
T  11465111 taacccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcc 11465059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 16616112 - 16616164
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||| | ||||| | || ||||||||||||||||||||||||||||    
T  16616112 taacccatttgagattggcttagtagttggcttgggatcttggagtttgctcc 16616164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 22253345 - 22253297
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| || ||||||||||||||||||| || ||||||||    
T  22253345 ccatttggggttggtctagtggttggcttgggatctttgactttgctcc 22253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 5067295 - 5067346
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||| ||||| || ||||||| ||||||||||| |||||||||||    
T  5067295 aacccatttggagttggtctagtggttgacttgggatcttcgagtttgctcc 5067346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 6014473 - 6014434
Alignment:
Q  281 gggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  6014473 gggttggcctagtgattggcttgggatcttggagtttgct 6014434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 10869760 - 10869717
Alignment:
Q  279 tggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||    
T  10869760 tggggttggcatggtggttgacttgcgatcttggagtttgctcc 10869717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 27487755 - 27487708
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||    
T  27487755 ccatttggggttggcctagtggttgatttgggattttggagtttgctc 27487708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 40330628 - 40330678
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||| ||||||| | |||||| ||||| ||||||||||||||||||    
T  40330628 acccatttgaggttggcttagtggttagcttgagatcttggagtttgctcc 40330678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 42193478 - 42193528
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||||||||   |||||||| ||||||| |||||||||||||||||||||    
T  42193478 taacccatttattgttggcctagtggttgacttgggatcttggagtttgct 42193528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 930685 - 930637
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||  |||||||||||| ||| || |||||||||||    
T  930685 ccatttggggttggcccagtggttggcttgagattttagagtttgctcc 930637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Original strand, 7151346 - 7151374
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  7151346 ggttggcttgggatcttggagtttgctcc 7151374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 12398628 - 12398600
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcc 12398600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 15485495 - 15485443
Alignment:
Q  271 aacccatttggggttggcctggtgg-ttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| | || ||||||||||| |||||||| ||||||    
T  15485495 aacccatttggggttggcctagcgggttggcttgggaccttggagtgtgctcc 15485443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 19230469 - 19230513
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagt 315  Q
    |||||| ||||||||||||| |||||| | |||||||||||||||    
T  19230469 aacccaattggggttggcctagtggttagtttgggatcttggagt 19230513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 19456389 - 19456361
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcc 19456361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 21042729 - 21042677
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||||  | ||| |||| ||||||||||||||||||||||    
T  21042729 taactcatttggggttggtttagtgattggtttgggatcttggagtttgctcc 21042677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 25343231 - 25343275
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttgga 313  Q
    |||||||||||||||||||||| ||||||| ||||  ||||||||    
T  25343231 gtaacccatttggggttggcctagtggttgacttgaaatcttgga 25343275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 4718641 - 4718694
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4718641 gtaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 4718694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 2618184 - 2618235
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2618184 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 2618235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 3734826 - 3734775
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3734826 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 3734775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 18532105 - 18532156
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18532105 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 18532156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 34237858 - 34237807
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34237858 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 34237807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 19471608 - 19471658
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19471608 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 19471658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 19542532 - 19542582
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19542532 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 19542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 19590164 - 19590114
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19590164 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 19590114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 20305905 - 20305957
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  20305905 taacccatttggggttggcctagtggttggcttgggatcttagagtttgctcc 20305957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 21092538 - 21092590
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  21092538 taacccatttggggttggcctagtggttggcttgggatcttagagtttgctcc 21092590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 28193471 - 28193523
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  28193471 taacctatttggggttggcctagtggttggcttgggatcttggagtttgctcc 28193523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 42643322 - 42643270
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  42643322 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcc 42643270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 39349254 - 39349305
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtttgctcc 39349305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 42328004 - 42328049
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagttt 317  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  42328004 acccatttggggttggcctagtggttggcttgggatcttggagttt 42328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 27746535 - 27746487
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  27746535 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcc 27746487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7558146 - 7558095
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  7558146 aacccatttggggttggcctagtagttagcttgggatcttggagtttgctcc 7558095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 26169051 - 26169000
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  26169051 aacccatttagggttggcctagtggtttgcttgggatcttggagtttgctcc 26169000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 8042655 - 8042703
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  8042655 ccatttggggttgacctagtgcttggcttgggatcttggagtttgctcc 8042703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 264597 - 264551
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcc 264551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 651324 - 651370
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcc 651370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 837059 - 837105
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcc 837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 15259606 - 15259558
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| || |||||||| ||||||||||||| ||||||||    
T  15259606 ccatttggggttggtctagtggttggtttgggatcttggattttgctcc 15259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 34639406 - 34639358
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| | || |||||||||||||||||||||||| ||||||    
T  34639406 ccatttggggttagtctagtggttggcttgggatcttggagtgtgctcc 34639358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 34694776 - 34694728
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| || ||||||| |||| ||||||||||||||||||    
T  34694776 ccatttggggttggtctagtggttgacttgtgatcttggagtttgctcc 34694728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 3403706 - 3403655
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||| ||||||||| | ||||||| || |||||||||||||||||    
T  3403706 taacccatttgaggttggccttggggttggcctgagatcttggagtttgctc 3403655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 24018380 - 24018431
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||  || ||||||| |||||||||||||||||||||||    
T  24018380 aacctatttggggttgatctagtggttgacttgggatcttggagtttgctcc 24018431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 28088284 - 28088331
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttg 318  Q
    ||||||| |||||||||| | ||||||| |||||||||||||||||||    
T  28088284 aacccatctggggttggcttagtggttgacttgggatcttggagtttg 28088331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 32879277 - 32879324
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttg 318  Q
    ||||||||||||||||| || ||||||| ||||||||||| |||||||    
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagtttg 32879324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 8387644 - 8387598
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||||||||||||||| ||||||| |||| |||||| |||||||||    
T  8387644 ccatttggggttggcctagtggttgtcttgagatcttagagtttgct 8387598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 21603241 - 21603279
Alignment:
Q  284 ttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  21603241 ttggcctagtggttggcttgggatcttagagtttgctcc 21603279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 28964033 - 28964082
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| || |||||||| ||| |||||| |||||||||||    
T  28964033 cccatttggggttggtctagtggttggtttgagatcttagagtttgctcc 28964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 41070767 - 41070808
Alignment:
Q  279 tggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||||||||||| ||||||| |||||||||||||||| ||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgct 41070808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 2166695 - 2166746
Alignment:
Q  271 aacccatttggggttggcctggtg--gttggcttgggatcttggagtttgct 320  Q
    |||||||||||||||||||  |||  ||||| ||||||||||||||||||||    
T  2166695 aacccatttggggttggcccagtgcagttggtttgggatcttggagtttgct 2166746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Original strand, 14632975 - 14633003
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcc 14633003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 21667551 - 21667599
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| |||||| || ||||||||||||| ||||||||| |||||||    
T  21667551 ccatttgaggttggtctagtggttggcttggaatcttggaggttgctcc 21667599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 36848949 - 36848901
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| | ||||||| |||||| | ||||||||||||||    
T  36848949 ccatttggggttggcatagtggttgacttgggtttttggagtttgctcc 36848901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 8611 - 8559
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8611 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 8559  T

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Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 18044104 - 18044156
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18044104 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 18044156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 40543118 - 40543062
Alignment:
Q  266 aatgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40543118 aatgcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 40543062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 2344297 - 2344348
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2344297 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 2344348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 2751269 - 2751320
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2751269 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 2751320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7176065 - 7176014
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7176065 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 7176014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 7275275 - 7275326
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 7275326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 21218036 - 21217985
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21218036 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 21217985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 23854394 - 23854445
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 23854445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 2103054 - 2103104
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2103054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 2103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 10091183 - 10091237
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  10091183 tgtaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 10091237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 27312149 - 27312201
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  27312149 taacctatttggggttggcctagtggttggcttgggatcttggagtttgctcc 27312201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 13332622 - 13332575
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagtttgctcc 13332575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 17212051 - 17212102
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagtttgctcc 17212102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 22119890 - 22119937
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcc 22119937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 27009356 - 27009407
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27009356 taacccatttggggttggcctagtggttggcttcggatcttggagtttgctc 27009407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 31713098 - 31713047
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  31713098 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcc 31713047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 7800034 - 7799984
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagtttgctcc 7799984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 31197589 - 31197639
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  31197589 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctc 31197639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 25333417 - 25333466
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  25333417 aacccatttggggttggcttagtggttggcttgggatcttggagtttgct 25333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 28089817 - 28089865
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28089817 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 28089865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 11997847 - 11997898
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcc 11997898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 21370595 - 21370646
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  21370595 aacccatttggggttggcctagtggttggtttgggatcttggagtttactcc 21370646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 32849589 - 32849640
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  32849589 aacccatttggggttagcctagtggttgacttgggatcttggagtttgctcc 32849640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 42913716 - 42913665
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  42913716 aacccattttcggttggcctagtggttggcttgggatcttggagtttgctcc 42913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 19421230 - 19421280
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  19421230 acccatttggggttgacttagtggttggcttgggatcttggagtttgctcc 19421280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 39145857 - 39145804
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  39145857 gtaacccatttgaggttgacctagtggttgacttgggatcttggagtttgctcc 39145804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 8435895 - 8435847
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||    
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcc 8435847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 12211735 - 12211687
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtgctcc 12211687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 17197154 - 17197102
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  17197154 taacccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcc 17197102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 21835152 - 21835200
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  21835152 ccatttagggttgacctagtggttggcttgggatcttggagtttgctcc 21835200  T

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Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 28003838 - 28003885
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||    
T  28003838 catttggggttgatctagtggttggcttgggatcttggagtttgctcc 28003885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 577681 - 577727
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||    
T  577681 catttggggttggcctagtggtttgcttgggatcttagagtttgctc 577727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 21574305 - 21574255
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||||||    
T  21574305 acccatttggggttggcctagtggttggtttgggattttggagtgtgctcc 21574255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 23012707 - 23012662
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||    
T  23012707 catttagggttggcccagtggttggcttgggatcttggagtttgct 23012662  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 22299863 - 22299898
Alignment:
Q  287 gcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||||||||||||||||||||||    
T  22299863 gcctagtggttggcttgggatcttggagtttgctcc 22299898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 40332097 - 40332148
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||| ||||| || ||||||||||||  |||||||||||||||||    
T  40332097 aacccatttggagttggtctagtggttggcttgaaatcttggagtttgctcc 40332148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 43785502 - 43785451
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||  |||||||||||||||||| ||| |||||||    
T  43785502 aacccatttggggttgacctaatggttggcttgggatctttgagattgctcc 43785451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 22638290 - 22638340
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||| || ||||||| |||| |||||| ||||||||||    
T  22638290 aacccatttggggttggtctagtggttgacttgagatcttagagtttgctc 22638340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Original strand, 22703505 - 22703535
Alignment:
Q  292 gtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||||    
T  22703505 gtggttggcttgggatcttggagtttgctcc 22703535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 23330941 - 23330891
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||| |||| |||||||||||||||| || |||| ||||||    
T  23330941 acccatttggggttagcctagtggttggcttgggattttagagtgtgctcc 23330891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 33137998 - 33137949
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||||||||| || ||||||||||||  |||||||||||||    
T  33137998 aacccatttggggttggcctagt-gttggcttgggaatttggagtttgctc 33137949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 42814867 - 42814913
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||| | ||||||| |||||||||||||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcc 42814913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 28646967 - 28647016
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||| ||||||||||||||| ||| ||| |||||||||||||||| ||||    
T  28646967 aacctatttggggttggcctagtgattgacttgggatcttggagtgtgct 28647016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 3951190 - 3951142
Alignment:
Q  275 catttggggttggcctggtggttggctt-gggatcttggagtttgctcc 322  Q
    ||||||||||||| || ||||||||||| ||||||||||||| ||||||    
T  3951190 catttggggttggtctagtggttggcttggggatcttggagtgtgctcc 3951142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 9683827 - 9683875
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| ||||||||| ||||||| |||| ||||| ||||||||||||    
T  9683827 ccatttgcggttggcctagtggttgacttgagatctgggagtttgctcc 9683875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 9718187 - 9718139
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| ||||||||| ||||||||| || ||| ||||||||||||||    
T  9718187 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcc 9718139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 22696317 - 22696369
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||| ||||||||||| |||||||  ||||||||||||||| ||||||    
T  22696317 taactcattaggggttggcctagtggttgatttgggatcttggagtgtgctcc 22696369  T

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Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18976633 - 18976577
Alignment:
Q  266 aatgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18976633 aatgcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 18976577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 11941414 - 11941362
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  11941414 taacccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 11941362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 33827776 - 33827725
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggagattgctcc 33827725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 44946256 - 44946205
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 44946205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 8192553 - 8192503
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  8192553 acccatttggggttggcctagtggttggcttgggatcttggagtgtgctcc 8192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 15037953 - 15038004
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtttgctcc 15038004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 27269553 - 27269502
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  27269553 aacccatttggggttggcatagtggttggcttgggatcttcgagtttgctcc 27269502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 32845085 - 32845136
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  32845085 aacccatttggggttggcctagtagttagcttgggatcttggagtttgctcc 32845136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 44976353 - 44976306
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44976353 catttggggttggcctagtggttggcttgggatcttggggtttgctcc 44976306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 30467035 - 30466986
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatcttggagtttg 318  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  30467035 gtaacccatttggggttggcctagtggttggtttgggatattggagtttg 30466986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 4567637 - 4567589
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  4567637 ccatttggggttggcctagtagttggcttgggatcttgaagtttgctcc 4567589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 6714485 - 6714433
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||| |||||||  ||||||||||| ||||||||||||||||||    
T  6714485 taacccatttgggattggcctaatggttggcttgagatcttggagtttgctcc 6714433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 24195997 - 24196049
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||| |||||    
T  24195997 taacccatttggggttggcctagtggttggcttgggattttggggttcgctcc 24196049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 41313985 - 41314037
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| | | |||||||| ||||||||||||||||||||||    
T  41313985 taacccatttggggttgccgtagtggttggtttgggatcttggagtttgctcc 41314037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 17324764 - 17324811
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||||    
T  17324764 catttggggttggcctagtggttggtttggtatcttggagtttgctcc 17324811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 25293160 - 25293211
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| |||||| || ||||||| |||||||||||||||||||||||    
T  25293160 aacccatttgaggttggtctagtggttgacttgggatcttggagtttgctcc 25293211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 4852549 - 4852603
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| |||||||||||| ||| ||||||| ||||| |||||||||||||||||    
T  4852549 tgtaactcatttggggttgacctagtggttgacttggaatcttggagtttgctcc 4852603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 20297556 - 20297596
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatctt 310  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  20297556 taacccatttggggttggcccagtggttggcttgggatctt 20297596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 918898 - 918851
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||| |||||||||||||||| ||| ||||||||||    
T  918898 catttggggttgacctagtggttggcttgggattttgaagtttgctcc 918851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 4618880 - 4618837
Alignment:
Q  279 tggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagtatgctcc 4618837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 27290598 - 27290633
Alignment:
Q  287 gcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||||||||||||||||||||||    
T  27290598 gcctagtggttggcttgggatcttggagtttgctcc 27290633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 10582172 - 10582142
Alignment:
Q  292 gtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||||    
T  10582172 gtggttggcttgggatcttggagtttgctcc 10582142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 36390769 - 36390731
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatct 309  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  36390769 aacccatttggggttggcctagtggttggtttgggatct 36390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 40997552 - 40997502
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||| ||| || || ||||||| |||||||||||||||||||||||    
T  40997552 acccatttgaggtgggtctagtggttgacttgggatcttggagtttgctcc 40997502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 41329842 - 41329888
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| |||||| | |||||||||| |||||||||||    
T  41329842 atttggggttggcctagtggttagtttgggatcttagagtttgctcc 41329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 322
Target Start/End: Complemental strand, 1845838 - 1845809
Alignment:
Q  293 tggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||||||||||||    
T  1845838 tggttggcttgggatcttggagtttgctcc 1845809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 19054021 - 19054070
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||| ||| |||||||| ||||||||||| ||||||    
T  19054021 cccatttggggtgggcctagtgattggcttgagatcttggagtctgctcc 19054070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 322
Target Start/End: Complemental strand, 34516589 - 34516560
Alignment:
Q  293 tggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||||||||||||    
T  34516589 tggttggcttgggatcttggagtttgctcc 34516560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 28194337 - 28194285
Alignment:
Q  271 aacccatttggggttggcctggtggtt-ggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| | ||| || |||||||||||||||||| ||||||    
T  28194337 aacccatttggggttggcgtagtgatttggcttgggatcttggagtgtgctcc 28194285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 32526289 - 32526237
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| |||||| | |||||||  ||||||||||| ||||||||||    
T  32526289 taacccatttggagttggcttagtggttgatttgggatcttgaagtttgctcc 32526237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 43374505 - 43374477
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctcc 43374477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 8077640 - 8077692
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8077640 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 8077692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 24674386 - 24674438
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24674386 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 24674438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 4621440 - 4621389
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4621440 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 4621389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7197449 - 7197398
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 7197398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 34778336 - 34778387
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 34778387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 27455070 - 27455018
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  27455070 taacccatttggggttggtctagtggttggcttgggatcttggagtttgctcc 27455018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 15059605 - 15059554
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcc 15059554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 32729539 - 32729590
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcc 32729590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 46607804 - 46607855
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcc 46607855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 47091684 - 47091735
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  47091684 aacccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 29057540 - 29057491
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  29057540 aacccatttggggttggcctagtggttggtttgggatcttggagtttgct 29057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 1818730 - 1818778
Alignment:
Q  273 cccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  1818730 cccatttggggttggcctggtagttggcttaggatcttggagtttgctc 1818778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 7766931 - 7766879
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  7766931 taacccattcggggttggcctagtggttagcttgggatcttggagtttgctcc 7766879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 14258630 - 14258583
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttg 318  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  14258630 aacccatttgggcttggcctagtggttggcttgggatcttggagtttg 14258583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 168195 - 168245
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  168195 aacccatttggagttggcctagtggttggcttgggatcttagagtttgctc 168245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 46113600 - 46113554
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctcc 46113554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 1138572 - 1138624
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||    
T  1138572 taacccatttggggttgacctagtggttggcttgagatcttggagtgtgctcc 1138624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 24122016 - 24122068
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||    
T  24122016 taactcatttggggttggcttagtggttggcttgggatcttggggtttgctcc 24122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 315
Target Start/End: Original strand, 1486415 - 1486458
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagt 315  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttggagt 1486458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 2272342 - 2272389
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcc 2272389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 6776139 - 6776189
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  6776139 aacccatttggg-ttggcctagtggttggtttgggatcttggagtttgctcc 6776189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 20487393 - 20487342
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||  | |||||||||| ||||||||||||||||||||    
T  20487393 aacccatttggggttggtttagtggttggctcgggatcttggagtttgctcc 20487342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 30677170 - 30677221
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| ||| |||||||| ||||||||| ||||||||||||    
T  30677170 aacccatttggggttgacctagtggttggtttgggatctaggagtttgctcc 30677221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 40802271 - 40802220
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||||| | |||||||||||| ||| |||||||||||||    
T  40802271 taacccatttggggttggctttgtggttggcttgagatattggagtttgctc 40802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 52135127 - 52135174
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||| || ||||||| ||||||||||||||||||||||    
T  52135127 ccatttggggttggtctagtggttgacttgggatcttggagtttgctc 52135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 23232468 - 23232418
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||| ||||||| ||||||| |||||||||||| |||||||||    
T  23232468 aacccatttgggattggcctagtggttgacttgggatcttgaagtttgctc 23232418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 24216973 - 24217023
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||| ||||||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcc 24217023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 2537696 - 2537737
Alignment:
Q  269 gtaacccatttggggttggcctggtggttggcttgggatctt 310  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  2537696 gtaacccatttggggttggcctagtggttggattgggatctt 2537737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 809215 - 809267
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||| | |||||||||| |||||||| ||||||||||||||||| ||||    
T  809215 taacccatctagggttggcctcgtggttggtttgggatcttggagtttactcc 809267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 7946837 - 7946889
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||| | ||| |||||||||||| ||||||| ||||||||||    
T  7946837 taacccatttggggtcgacctagtggttggcttgagatcttgaagtttgctcc 7946889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 25496692 - 25496640
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||| |||||| |||||||| ||| ||||||||||||||||||| |||||||    
T  25496692 taacctatttggcgttggcctagtgattggcttgggatcttggagattgctcc 25496640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 1095193 - 1095154
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagt 315  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  1095193 atttggggttggtctagtggttggcttgggatcttggagt 1095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 1378892 - 1378943
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||  ||||||| | ||||||| |||||||||||||||||||||||    
T  1378892 aacccatttaaggttggcttagtggttgacttgggatcttggagtttgctcc 1378943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 18646846 - 18646896
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||| ||||||||||| ||| |||||||||||| |||||| |||||||||    
T  18646846 taacctatttggggttgacctagtggttggcttgtgatctttgagtttgct 18646896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 37351643 - 37351613
Alignment:
Q  292 gtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcc 37351613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 18533928 - 18533876
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| | | ||||||| |||| |||||| |||||||||||    
T  18533928 taacccatttggggttgacatagtggttgacttgagatcttagagtttgctcc 18533876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 23734109 - 23734161
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||  | || |||||||||||||||| || ||||||||    
T  23734109 taacccatttggggttggtttagtagttggcttgggatcttagaatttgctcc 23734161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 23741301 - 23741353
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||  | || |||||||||||||||| || ||||||||    
T  23741301 taacccatttggggttggtttagtagttggcttgggatcttagaatttgctcc 23741353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 33905690 - 33905662
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  33905690 ggttggcttgggatcttggagtttgctcc 33905662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 5285 - 5234
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5285 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 5234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 25852208 - 25852259
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25852208 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 25852259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 32986191 - 32986242
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 32986242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 40059055 - 40059004
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40059055 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 40059004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 46714386 - 46714437
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46714386 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 46714437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 54127545 - 54127494
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 54127494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 5609405 - 5609355
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5609405 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 5609355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 19660736 - 19660684
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  19660736 taacccatttggagttggcctagtggttggcttgggatcttggagtttgctcc 19660684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 20566346 - 20566394
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20566346 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcc 20566394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 33696483 - 33696431
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  33696483 taacccatttagggttggcctagtggttggcttgggatcttggagtttgctcc 33696431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 1985830 - 1985881
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagtttgctcc 1985881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 52983613 - 52983664
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  52983613 aacccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 52983664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 13873497 - 13873447
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  13873497 acccatttggggttggcctagtggtttgcttgggatcttggagtttgctcc 13873447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 35674944 - 35674894
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagtttgctc 35674894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 41621802 - 41621748
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  41621802 tgtaacccatttggggttggcctaatggttggcttgagatcttggagtttgctcc 41621748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 22625273 - 22625222
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  22625273 aacccatttgaggttggcctagtggttggcttgggatcttggagtttactcc 22625222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 27528998 - 27528947
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  27528998 aacccatctggggttggcttagtggttggcttgggatcttggagtttgctcc 27528947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 34722164 - 34722215
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  34722164 aacctatttggggttggcttagtggttggcttgggatcttggagtttgctcc 34722215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 34844961 - 34844910
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||||||    
T  34844961 aacccatttggggttggcctagtggtttgcttgagatcttggagtttgctcc 34844910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 13771686 - 13771636
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  13771686 aacccatttggggttggtctgatggttggcttgggatcttgaagtttgctc 13771636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 35229172 - 35229213
Alignment:
Q  281 gggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtttgctcc 35229213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 55961939 - 55961894
Alignment:
Q  277 tttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagtttgctcc 55961894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 33992620 - 33992671
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  33992620 aacccatttagggttgacctagtggttggtttgggatcttggagtttgctcc 33992671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 34835527 - 34835574
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||    
T  34835527 catttggggttggtctagtggttggcttgggatcttagagtttgctcc 34835574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 42245744 - 42245791
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagtttgctcc 42245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 51535611 - 51535658
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  51535611 catttagggttggcctagtggttgacttgggatcttggagtttgctcc 51535658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 44343506 - 44343559
Alignment:
Q  270 taacccatttggggttggcctggtggtt-ggcttgggatcttggagtttgctcc 322  Q
    ||||| |||||||||||| || |||||| |||||||||||||||||||||||||    
T  44343506 taacctatttggggttgggctagtggtttggcttgggatcttggagtttgctcc 44343559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 43719264 - 43719217
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||| || |||||||| ||| ||||||||||||||||||    
T  43719264 catttggggttggtctagtggttggtttgagatcttggagtttgctcc 43719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 45787902 - 45787856
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  45787902 catttggggttggcctagtggttggcttggaatcttgga-tttgctcc 45787856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 32942369 - 32942415
Alignment:
Q  276 atttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| || |||||||||||| ||||||||||||| ||||    
T  32942369 atttggggttggtctagtggttggcttgagatcttggagtttactcc 32942415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 36131714 - 36131668
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtt 316  Q
    ||||||||||||||||||| | |||||| ||||||||| ||||||||    
T  36131714 taacccatttggggttggcatagtggtttgcttgggattttggagtt 36131668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 7392143 - 7392115
Alignment:
Q  294 ggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcc 7392115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 10125783 - 10125823
Alignment:
Q  278 ttggggttggcctggtggttggcttgggatcttggagtttg 318  Q
    |||| |||||||| ||||||| |||||||||||||||||||    
T  10125783 ttggagttggcctagtggttgacttgggatcttggagtttg 10125823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 13550205 - 13550253
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| ||||||||| ||||||| |||| ||||| ||||||||||||    
T  13550205 ccatttgcggttggcctagtggttgacttgagatctgggagtttgctcc 13550253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 13584454 - 13584406
Alignment:
Q  274 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| ||||||||| ||||||||| || ||| ||||||||||||||    
T  13584454 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcc 13584406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 41848 - 41796
Alignment:
Q  270 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41848 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcc 41796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 1255 - 1208
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagtttgctcc 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 10892 - 10845
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagtttgctcc 10845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 9498 - 9451
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagtttgctcc 9451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 12199 - 12152
Alignment:
Q  275 catttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagtttgctcc 12152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 14985 - 15036
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagtttgctcc 15036  T

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Target: scaffold0070 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 40319 - 40370
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  40319 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcc 40370  T

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Target: scaffold0026 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 97569 - 97518
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  97569 aacccatttggggttggcctagtggttggcttgggatcttgtagtttgctcc 97518  T

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Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 53073 - 53023
Alignment:
Q  272 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  53073 acccatttgggattggcctagtggttggcttgggatcttggagtttgctcc 53023  T

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Target: scaffold0217 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7512 - 7461
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  7512 aacctatttggggttggcctagtagttggcttgggatcttggagtttgctcc 7461  T

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Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 66756 - 66807
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagtttgctcc 66807  T

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Target: scaffold0200 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 26746 - 26697
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgct 320  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  26746 aacccatttggggttggcctactggttggcttaggatcttggagtttgct 26697  T

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Target: scaffold0460 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 8382 - 8331
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    |||||||||||||||||  | |||||||||| ||||||||||||||||||||    
T  8382 aacccatttggggttggtttagtggttggctcgggatcttggagtttgctcc 8331  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 27770 - 27821
Alignment:
Q  271 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  27770 aacccatttggggttggtctagtggttggtttgggattttggagtttgctcc 27821  T

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Target: scaffold0240 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 12960 - 12906
Alignment:
Q  268 tgtaacccatttggggttggcctggtggttggcttgggatcttggagtttgctcc 322  Q
    ||||||| ||||||| ||||||| ||||||| ||||||||||||||||| |||||    
T  12960 tgtaacctatttgggattggcctagtggttgacttgggatcttggagttcgctcc 12906  T

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Target: scaffold0717 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 150 - 111
Alignment:
Q  282 ggttggcctggtggttggcttgggatcttggagtttgctc 321  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagtttgctc 111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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