View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15458_low_19 (Length: 294)
Name: NF15458_low_19
Description: NF15458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15458_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 13445967 - 13446229
Alignment:
| Q |
12 |
aagaatatactgacctgaagtcaatatgtgtagtctagagatatagatgtctcatcgtatttggaaaaggtaggtgccttcaaaggttttgaataacatg |
111 |
Q |
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| T |
13445967 |
aagaatatactgacctgaagtcaatatgggtagtctagagatatggatgtttcatcgtatttggaaaaggtaggtgccttcaaaggttttgaataacatg |
13446066 |
T |
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| Q |
112 |
attcaaaatagatgtactctagctcattgtggagtcattttgcaggatatgaccgaagattgtattcggtgtgtgtgaatcaatcagaaacaaccttcca |
211 |
Q |
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||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
13446067 |
attcaaaatagatgtgctctagctcatcgtggagtcattttgcaggatatgaccgaagattgtattcg--gtgtgtgaatcaatcagaaacaaccttcca |
13446164 |
T |
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| Q |
212 |
tttatttgtacattgtgatttagggcctacaaggtcgcaggtcagctgagtatttaccgacttct |
276 |
Q |
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||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
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| T |
13446165 |
tttatttctacattgtgatttagggcctacaaggtcacaggtcagctgagtctttaccgacttct |
13446229 |
T |
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