View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1545_high_49 (Length: 251)
Name: NF1545_high_49
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1545_high_49 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16491368 - 16491136
Alignment:
| Q |
1 |
tatataattgaataatattcaaacaaattgttcacaatatgtaacaggaaaaatcaagtaaggtcttgttgatcatatcttatattatactatgaaaaat |
100 |
Q |
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| T |
16491368 |
tatataattgaataatattcaaacaaattgttcacaatatgtaacaggaaaaatcaagtaaggtcttgttgatcatattttatattatactatgaaaaat |
16491269 |
T |
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| Q |
101 |
tcaggatgattttacactaaagtaagaagaacactgatacagctgcatacatatttacatttagactctaattttgtcacatattctatgtgtgagcaga |
200 |
Q |
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| T |
16491268 |
taaggatgattttacactaaagtaagaagaacactgatacagctgcatacatatttacatttagactctaattttgtcacatattctatgtgtgagcaga |
16491169 |
T |
|
| Q |
201 |
tgtggtgttcacacatgacatcagatgcctaac |
233 |
Q |
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| T |
16491168 |
tgtggtgtacacacatgacatcagatgcctaac |
16491136 |
T |
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