View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1545_high_61 (Length: 208)
Name: NF1545_high_61
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1545_high_61 |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 2567164 - 2566986
Alignment:
| Q |
12 |
aagaaaatatatgaatatttattttgtcactttattgtaaagatatttttgttagaagaaatatatatcctataccaagnnnnnnnnnattagatctcct |
111 |
Q |
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| T |
2567164 |
aagaaaatatatgaatatttattttgtcactttgttgtaaagatatttttgttagaagaaatatatatcctataccta-agtttttttattagatctcct |
2567066 |
T |
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| Q |
112 |
ataccaagttattaaagttttacatcaacttaaatcatctaaatatatttagtaaatcactcctttcaaccacatatttt |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2567065 |
ataccaagttattaaagttttacatcaacttaaatcatctaaatatatttagtaaatcactcctttcaaccacatatttt |
2566986 |
T |
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