View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1545_low_15 (Length: 495)

Name: NF1545_low_15
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1545_low_15
NF1545_low_15
[»] chr3 (43 HSPs)
chr3 (7-238)||(44000468-44000697)
chr3 (239-385)||(44000187-44000332)
chr3 (386-473)||(43999896-43999983)
chr3 (240-380)||(2135000-2135140)
chr3 (249-348)||(44116902-44117000)
chr3 (240-380)||(28675720-28675860)
chr3 (240-348)||(39052853-39052960)
chr3 (249-380)||(4851480-4851611)
chr3 (240-340)||(47958447-47958546)
chr3 (240-365)||(31883037-31883161)
chr3 (240-348)||(38213317-38213424)
chr3 (240-348)||(1344722-1344829)
chr3 (240-348)||(3864690-3864796)
chr3 (240-348)||(12349186-12349293)
chr3 (240-294)||(22484758-22484812)
chr3 (240-348)||(24571244-24571351)
chr3 (255-365)||(28624950-28625058)
chr3 (240-348)||(29584838-29584945)
chr3 (240-359)||(29646017-29646136)
chr3 (240-355)||(51925223-51925337)
chr3 (240-348)||(54622811-54622918)
chr3 (240-355)||(33364793-33364907)
chr3 (249-348)||(53557819-53557917)
chr3 (240-348)||(3695307-3695414)
chr3 (240-380)||(26282402-26282542)
chr3 (240-340)||(49748926-49749025)
chr3 (240-294)||(20609663-20609717)
chr3 (240-348)||(21221375-21221482)
chr3 (240-294)||(21373946-21374000)
chr3 (240-348)||(25860436-25860543)
chr3 (240-348)||(34026630-34026737)
chr3 (386-428)||(44000193-44000235)
chr3 (240-293)||(42636418-42636471)
chr3 (249-293)||(25927351-25927395)
chr3 (343-379)||(43999941-43999977)
chr3 (249-293)||(51259804-51259848)
chr3 (239-278)||(42547384-42547423)
chr3 (240-294)||(3964304-3964358)
chr3 (239-293)||(8648571-8648625)
chr3 (240-294)||(50678814-50678868)
chr3 (302-355)||(45690977-45691029)
chr3 (307-359)||(10747169-10747221)
chr3 (308-348)||(53046723-53046763)
[»] chr8 (37 HSPs)
chr8 (249-353)||(16595194-16595297)
chr8 (240-375)||(29672359-29672494)
chr8 (240-382)||(12753361-12753503)
chr8 (240-348)||(29563262-29563369)
chr8 (240-348)||(41709739-41709846)
chr8 (240-348)||(45446417-45446524)
chr8 (240-380)||(8673091-8673231)
chr8 (240-348)||(6386538-6386645)
chr8 (240-294)||(15001481-15001535)
chr8 (240-348)||(32020037-32020144)
chr8 (240-348)||(32303621-32303728)
chr8 (240-348)||(34063090-34063197)
chr8 (240-294)||(37664319-37664373)
chr8 (240-375)||(35225597-35225731)
chr8 (255-380)||(13406986-13407111)
chr8 (240-380)||(30543058-30543198)
chr8 (239-290)||(54189-54240)
chr8 (240-348)||(3251692-3251799)
chr8 (240-348)||(4052444-4052549)
chr8 (240-380)||(31513619-31513759)
chr8 (240-294)||(21272699-21272753)
chr8 (237-294)||(3800976-3801033)
chr8 (240-355)||(10467019-10467133)
chr8 (240-293)||(14005080-14005133)
chr8 (249-294)||(22756456-22756501)
chr8 (249-348)||(25478205-25478303)
chr8 (249-348)||(27103921-27104019)
chr8 (240-293)||(30501161-30501214)
chr8 (240-347)||(37618428-37618534)
chr8 (249-355)||(41548573-41548678)
chr8 (250-352)||(5859518-5859619)
chr8 (250-348)||(31732026-31732123)
chr8 (240-348)||(5968900-5969007)
chr8 (240-294)||(16485845-16485899)
chr8 (309-372)||(18297469-18297534)
chr8 (249-293)||(7394859-7394903)
chr8 (386-434)||(35225587-35225635)
[»] chr6 (35 HSPs)
chr6 (245-365)||(27824715-27824834)
chr6 (240-375)||(10959935-10960069)
chr6 (240-380)||(3932867-3933007)
chr6 (240-348)||(15277340-15277447)
chr6 (240-340)||(24242634-24242733)
chr6 (239-357)||(29424626-29424743)
chr6 (240-380)||(2614825-2614965)
chr6 (240-380)||(17867764-17867904)
chr6 (240-380)||(17877547-17877687)
chr6 (240-365)||(31870160-31870284)
chr6 (240-348)||(3259645-3259752)
chr6 (240-348)||(11613851-11613958)
chr6 (249-294)||(7396194-7396239)
chr6 (249-348)||(32132449-32132547)
chr6 (249-348)||(34176792-34176890)
chr6 (237-293)||(9902715-9902771)
chr6 (240-366)||(10485101-10485226)
chr6 (240-294)||(166983-167037)
chr6 (302-368)||(28068753-28068819)
chr6 (240-293)||(24203378-24203431)
chr6 (302-355)||(32614059-32614112)
chr6 (302-375)||(10552710-10552785)
chr6 (250-294)||(17443277-17443321)
chr6 (250-294)||(18057534-18057578)
chr6 (240-348)||(10324171-10324278)
chr6 (399-445)||(8342783-8342829)
chr6 (240-294)||(11279143-11279197)
chr6 (240-294)||(11382079-11382133)
chr6 (240-290)||(29054375-29054425)
chr6 (240-294)||(32409912-32409966)
chr6 (249-294)||(3379725-3379770)
chr6 (240-293)||(8177941-8177994)
chr6 (240-293)||(32860067-32860120)
chr6 (250-286)||(4494185-4494221)
chr6 (250-294)||(14925526-14925570)
[»] chr4 (52 HSPs)
chr4 (302-375)||(7001792-7001865)
chr4 (240-380)||(33552856-33552996)
chr4 (240-355)||(44324356-44324470)
chr4 (240-341)||(24002310-24002411)
chr4 (240-380)||(20802545-20802685)
chr4 (240-385)||(55065347-55065491)
chr4 (240-348)||(23521845-23521952)
chr4 (240-348)||(43641064-43641171)
chr4 (240-381)||(24210249-24210391)
chr4 (240-385)||(36743702-36743847)
chr4 (240-380)||(56154553-56154693)
chr4 (240-348)||(9512354-9512461)
chr4 (240-359)||(37695555-37695673)
chr4 (249-348)||(4325756-4325854)
chr4 (239-373)||(9435338-9435472)
chr4 (258-348)||(42869938-42870028)
chr4 (240-380)||(33177046-33177186)
chr4 (240-380)||(55593817-55593957)
chr4 (240-380)||(21579958-21580098)
chr4 (249-380)||(29616102-29616233)
chr4 (240-348)||(50727927-50728034)
chr4 (240-348)||(50735941-50736048)
chr4 (240-340)||(2725147-2725245)
chr4 (240-348)||(21202705-21202811)
chr4 (240-348)||(29785551-29785658)
chr4 (239-293)||(31445889-31445943)
chr4 (240-294)||(38812538-38812592)
chr4 (240-340)||(47642505-47642604)
chr4 (249-375)||(7554980-7555105)
chr4 (240-365)||(16320469-16320591)
chr4 (245-294)||(40792435-40792484)
chr4 (252-293)||(41720862-41720903)
chr4 (240-355)||(52949679-52949792)
chr4 (302-382)||(985214-985293)
chr4 (255-348)||(14296562-14296654)
chr4 (255-348)||(14314810-14314902)
chr4 (305-365)||(20644319-20644379)
chr4 (250-294)||(32181281-32181325)
chr4 (250-355)||(9807114-9807218)
chr4 (240-348)||(49152114-49152220)
chr4 (247-293)||(2629972-2630018)
chr4 (240-294)||(12600904-12600958)
chr4 (240-294)||(28115270-28115324)
chr4 (252-347)||(42772724-42772818)
chr4 (240-294)||(50186546-50186600)
chr4 (240-294)||(50729556-50729610)
chr4 (240-285)||(1231338-1231383)
chr4 (240-293)||(3649655-3649708)
chr4 (249-294)||(37865771-37865816)
chr4 (239-292)||(45577705-45577758)
chr4 (239-279)||(2786997-2787037)
chr4 (240-284)||(52319351-52319395)
[»] chr7 (39 HSPs)
chr7 (240-385)||(29661251-29661396)
chr7 (240-380)||(46633630-46633770)
chr7 (240-348)||(10932579-10932686)
chr7 (240-374)||(34117392-34117525)
chr7 (240-380)||(11321907-11322047)
chr7 (240-349)||(21784836-21784944)
chr7 (240-348)||(3922725-3922832)
chr7 (303-365)||(29372863-29372925)
chr7 (240-348)||(47953156-47953263)
chr7 (240-382)||(18386456-18386598)
chr7 (249-348)||(40753121-40753219)
chr7 (249-348)||(47947726-47947824)
chr7 (250-348)||(44748661-44748758)
chr7 (240-380)||(32873791-32873931)
chr7 (240-348)||(41211222-41211330)
chr7 (240-380)||(43158708-43158848)
chr7 (240-348)||(26994247-26994354)
chr7 (240-348)||(36769591-36769698)
chr7 (240-294)||(41665597-41665651)
chr7 (249-348)||(26371840-26371938)
chr7 (240-355)||(26652825-26652939)
chr7 (252-338)||(29992729-29992813)
chr7 (240-359)||(34295426-34295544)
chr7 (240-355)||(9913484-9913598)
chr7 (240-355)||(9927172-9927286)
chr7 (240-294)||(34519527-34519581)
chr7 (240-375)||(329409-329543)
chr7 (240-380)||(30849268-30849408)
chr7 (240-365)||(1363586-1363709)
chr7 (252-348)||(18470650-18470745)
chr7 (251-294)||(22724564-22724607)
chr7 (240-355)||(23349313-23349427)
chr7 (240-294)||(26910432-26910486)
chr7 (310-368)||(29455937-29455995)
chr7 (245-279)||(37967008-37967042)
chr7 (240-285)||(1870163-1870208)
chr7 (308-364)||(47316787-47316844)
chr7 (239-272)||(48894758-48894791)
chr7 (240-272)||(20127330-20127362)
[»] chr5 (31 HSPs)
chr5 (240-348)||(39788154-39788262)
chr5 (240-348)||(28090547-28090654)
chr5 (240-375)||(4818167-4818302)
chr5 (240-348)||(5571671-5571776)
chr5 (240-380)||(40182393-40182533)
chr5 (240-355)||(3735312-3735426)
chr5 (240-294)||(7523187-7523241)
chr5 (249-333)||(17031134-17031217)
chr5 (240-348)||(31770618-31770725)
chr5 (240-348)||(32528677-32528784)
chr5 (302-375)||(32313773-32313846)
chr5 (240-365)||(8561009-8561132)
chr5 (240-348)||(2351642-2351749)
chr5 (240-348)||(6284325-6284433)
chr5 (240-348)||(7208257-7208364)
chr5 (240-365)||(31644391-31644515)
chr5 (240-348)||(39918469-39918576)
chr5 (240-294)||(21739188-21739242)
chr5 (240-348)||(29241340-29241447)
chr5 (240-294)||(32093008-32093062)
chr5 (240-294)||(34794902-34794956)
chr5 (240-293)||(553413-553466)
chr5 (240-293)||(700628-700681)
chr5 (240-293)||(4689725-4689778)
chr5 (240-293)||(7770306-7770359)
chr5 (240-293)||(24036246-24036299)
chr5 (240-380)||(31880103-31880243)
chr5 (240-294)||(11963356-11963410)
chr5 (249-348)||(40489299-40489397)
chr5 (240-293)||(8136853-8136906)
chr5 (308-380)||(23091398-23091471)
[»] scaffold0169 (2 HSPs)
scaffold0169 (240-348)||(12563-12670)
scaffold0169 (240-348)||(18081-18188)
[»] chr1 (40 HSPs)
chr1 (240-348)||(16386825-16386932)
chr1 (240-348)||(844820-844927)
chr1 (240-375)||(1601116-1601251)
chr1 (305-375)||(4895337-4895407)
chr1 (240-360)||(16437321-16437440)
chr1 (240-355)||(31004096-31004210)
chr1 (240-382)||(45490971-45491113)
chr1 (240-380)||(6711142-6711282)
chr1 (240-380)||(7183856-7183996)
chr1 (240-348)||(12890209-12890316)
chr1 (240-348)||(16451098-16451205)
chr1 (240-382)||(17887883-17888026)
chr1 (240-348)||(28340399-28340506)
chr1 (240-348)||(42510496-42510603)
chr1 (240-348)||(50540315-50540422)
chr1 (240-355)||(25539819-25539933)
chr1 (302-374)||(30798848-30798920)
chr1 (238-294)||(46447688-46447744)
chr1 (240-348)||(35387407-35387514)
chr1 (240-348)||(44738138-44738244)
chr1 (240-294)||(1351531-1351585)
chr1 (240-348)||(24339735-24339840)
chr1 (252-348)||(30105788-30105883)
chr1 (240-348)||(51264466-51264573)
chr1 (249-294)||(16476260-16476305)
chr1 (249-348)||(26118320-26118418)
chr1 (240-355)||(45658785-45658899)
chr1 (240-293)||(46154925-46154978)
chr1 (240-293)||(50382499-50382552)
chr1 (249-293)||(26764900-26764944)
chr1 (240-365)||(38663086-38663210)
chr1 (239-364)||(2761651-2761774)
chr1 (386-424)||(4895337-4895375)
chr1 (240-294)||(41967945-41967999)
chr1 (310-375)||(51703327-51703393)
chr1 (240-293)||(6029397-6029450)
chr1 (239-279)||(10384406-10384446)
chr1 (249-293)||(16643287-16643331)
chr1 (239-275)||(38087091-38087127)
chr1 (249-293)||(51703268-51703312)
[»] chr2 (31 HSPs)
chr2 (240-348)||(32497877-32497984)
chr2 (240-375)||(11114807-11114941)
chr2 (240-375)||(16177904-16178036)
chr2 (240-348)||(17540676-17540784)
chr2 (240-348)||(5278855-5278962)
chr2 (240-294)||(30798510-30798564)
chr2 (240-348)||(34338772-34338879)
chr2 (240-294)||(38993092-38993146)
chr2 (240-293)||(33889259-33889312)
chr2 (240-348)||(2645107-2645214)
chr2 (240-348)||(7258858-7258966)
chr2 (239-348)||(44284591-44284699)
chr2 (240-340)||(7761594-7761693)
chr2 (240-294)||(9717239-9717293)
chr2 (240-348)||(9732951-9733058)
chr2 (240-348)||(16104236-16104343)
chr2 (240-294)||(19513710-19513764)
chr2 (240-348)||(30326352-30326459)
chr2 (240-348)||(35114747-35114854)
chr2 (240-382)||(42706285-42706428)
chr2 (240-293)||(26418939-26418992)
chr2 (245-293)||(13829454-13829502)
chr2 (240-380)||(18685765-18685905)
chr2 (240-348)||(3913481-3913588)
chr2 (302-365)||(32766587-32766650)
chr2 (240-294)||(6896183-6896237)
chr2 (240-294)||(37308670-37308724)
chr2 (307-360)||(1247105-1247158)
chr2 (240-293)||(37003889-37003942)
chr2 (249-285)||(1247171-1247207)
chr2 (308-348)||(4641478-4641518)
[»] scaffold0077 (1 HSPs)
scaffold0077 (255-362)||(7503-7610)
[»] scaffold0014 (1 HSPs)
scaffold0014 (240-348)||(101911-102018)
[»] scaffold0054 (1 HSPs)
scaffold0054 (240-348)||(23539-23644)
[»] scaffold0181 (1 HSPs)
scaffold0181 (249-348)||(19126-19224)
[»] scaffold0004 (1 HSPs)
scaffold0004 (249-348)||(373000-373098)
[»] scaffold0098 (1 HSPs)
scaffold0098 (240-374)||(51374-51508)
[»] scaffold0208 (1 HSPs)
scaffold0208 (240-294)||(2365-2419)
[»] scaffold0027 (1 HSPs)
scaffold0027 (240-347)||(15135-15241)
[»] scaffold0025 (1 HSPs)
scaffold0025 (240-293)||(5467-5520)
[»] scaffold0650 (1 HSPs)
scaffold0650 (240-294)||(1670-1724)
[»] scaffold0360 (1 HSPs)
scaffold0360 (240-294)||(15408-15462)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 8e-96; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 7 - 238
Target Start/End: Complemental strand, 44000697 - 44000468
Alignment:
Q  7 aactaggatttaggttttataggtaataatcccttaaattgctcatacatattttcaaagaaaaaatatttagcataagttgcaacccaatcaaatttta 106  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44000697 aactagggtttaggttttataggtgataatcccttaaattgctcatacatattttcaaagaaaaaatatttagcataagtttcaacccaatcaaatttta 44000598  T
Q  107 atcccaaaaaatatctatcggggaacacaacaattttttaagtactgggggtttattgtaatagttaannnnnnnnnnnctaccgccgtaaatgtaattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||           |||||||||||||||||||||    
T  44000597 atcccaaaaaatatctatcggggaacacaacaattttttaagtacggggggtttattgtaatagttaa--tttttttttctaccgccgtaaatgtaattg 44000500  T
Q  207 taacctaaacccaatatgtaaaaaataagtat 238  Q
    ||||||||||||||||||||||||||||||||    
T  44000499 taacctaaacccaatatgtaaaaaataagtat 44000468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 239 - 385
Target Start/End: Complemental strand, 44000332 - 44000187
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||||||||||||| ||||    
T  44000332 taaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagtttttt-gtccaccaaaaatcgtataagaccaaaaattattcaa 44000234  T
Q  339 tgctataaaagtttgtcttgtattgttttgtcttgtgatgtattatt 385  Q
    | | |||||||||||||||||||||||||||||||||||||||||||    
T  44000233 taccataaaagtttgtcttgtattgttttgtcttgtgatgtattatt 44000187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 386 - 473
Target Start/End: Complemental strand, 43999983 - 43999896
Alignment:
Q  386 aataccataaaagtttgtattgtgttgttttgtcttgtgatgttttgtctagtatatactcttttgctaaaacgcgcgtatgtttcat 473  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  43999983 aataccataaaagtttgtcttgtgttgttttgtcttgtgatgttttgtctagtacatactcttttgttaaaacgcacgtatgtttcat 43999896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 2135140 - 2135000
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||||||||| |||||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  2135140 aaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatag-cactttgtccctcaaaaatcgtataaaacaaaaaattactcaat 2135042  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||||||| ||||| || |||||| ||||    
T  2135041 gccataaaaaatttgtcttgtgttgttctgccttgtgttgta 2135000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 44117000 - 44116902
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  44117000 cacaactttttgtcccacgtacaagttgtctaaaatacaaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 44116902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 28675860 - 28675720
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  28675860 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 28675762  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  28675761 gccataaaaaatttgtcctgtgttgttctgccttgtgttgta 28675720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 39052853 - 39052960
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        |||| ||||||||||||||| || | ||||||||||||    
T  39052853 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacaacaaattactcaat 39052951  T
Q  340 gctataaaa 348  Q
    |||||||||    
T  39052952 gctataaaa 39052960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 380
Target Start/End: Original strand, 4851480 - 4851611
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa 347  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||||||| || |||    
T  4851480 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 4851578  T
Q  348 agtttgtcttgtattgttttgtcttgtgatgta 380  Q
    | |||||| ||| ||||| || |||||| ||||    
T  4851579 aatttgtcctgtcttgttctgccttgtgttgta 4851611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 47958447 - 47958546
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  47958447 aaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 47958545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 365
Target Start/End: Original strand, 31883037 - 31883161
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  31883037 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaat 31883135  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    |  |||||| |||||| ||| |||||    
T  31883136 gtcataaaaatttgtcctgtgttgtt 31883161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 38213424 - 38213317
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        |||| ||||||||||||||| || |||||||||||| |    
T  38213424 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata-ccattttgtcccccaaaaatcgtataaaacaaaaaattactcatt 38213326  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  38213325 gccataaaa 38213317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 1344722 - 1344829
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  1344722 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 1344820  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  1344821 gccataaaa 1344829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 3864690 - 3864796
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       |||| ||||||||| ||||| || ||||||||||||||    
T  3864690 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcc-ccaaaaatcatataaaacaaaaaattactcaat 3864787  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  3864788 gccataaaa 3864796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 12349186 - 12349293
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||| ||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  12349186 aaaccacagcacaactttatgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 12349284  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  12349285 gccataaaa 12349293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 22484758 - 22484812
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  22484758 aaactacaacacaactttttgtcccacgtataagttgtctaaaatacaaaaatag 22484812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 24571351 - 24571244
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| ||||||||||||||       |||| |||||||||| |||| || | ||||||||||||    
T  24571351 aaaccacagcacaactttttgtcccatgtacaagttgtctaaaatacaaaaatag-gattttgtcccccaaaaatcgaataaaacaacaaattactcaat 24571253  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  24571252 gccataaaa 24571244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 28624950 - 28625058
Alignment:
Q  255 tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgt 354  Q
    ||||||||| ||||| ||||||||| ||||||||||||         ||| |||||||||| |||||||| |||||||| ||||| | ||||||||||||    
T  28624950 tttttgtcctacgtataagttatctaaaatacaaaaat--cattttagtctaccaaaaatcttataagacaaaaaattattcaataccataaaagtttgt 28625047  T
Q  355 cttgtattgtt 365  Q
    ||||| |||||    
T  28625048 cttgtgttgtt 28625058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 29584945 - 29584838
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| |  ||||||||||||||    
T  29584945 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccttcaaaaatcgtataaaataaaaaattactcaat 29584847  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  29584846 gcaataaaa 29584838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 359
Target Start/End: Complemental strand, 29646136 - 29646017
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagac-caaaaattactcaa 338  Q
    |||| ||||||||||||||||||||||||||||||| | | |||||| |||||||       |||| ||||||||||||||| ||  |||||||| | ||    
T  29646136 aaaccacatcacaactttttgtcccacgtacaagttgtttaaaataccaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaaattatttaa 29646038  T
Q  339 tgctataaaagtttgtcttgt 359  Q
    ||| |||||| ||||||||||    
T  29646037 tgccataaaaatttgtcttgt 29646017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 51925223 - 51925337
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| | || ||||| ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  51925223 aaaccacaacacaactttttgtcccacgtacaagttgtttttaataccaaaata-acatttcgtcccccaaaaatcgtataaaacaaaaaattattcaat 51925321  T
Q  340 gctataaaagtttgtc 355  Q
    || |||||| ||||||    
T  51925322 gccataaaaatttgtc 51925337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 54622811 - 54622918
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||| ||| |||||| |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  54622811 aaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatag-catttcgtcccccaaaaatcgtataaaacaaaaaattattcaat 54622909  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  54622910 gccataaaa 54622918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 33364793 - 33364907
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||||||||||| |||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  33364793 aaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaat 33364891  T
Q  340 gctataaaagtttgtc 355  Q
    |  |||||| ||||||    
T  33364892 gtcataaaaatttgtc 33364907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 53557819 - 53557917
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  53557819 cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 53557917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 3695307 - 3695414
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||| |||||||        ||| |||||||| |||||| || | ||||||||||||    
T  3695307 aaaccacatcacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtatttta-tcccccaaaaattgtataaaacaacaaattactcaat 3695405  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  3695406 gccataaaa 3695414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 26282402 - 26282542
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| |||||    
T  26282402 aaaccacagcacaactttttgtcccacgtataagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 26282500  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||  |||| ||||||||| ||||    
T  26282501 gccataaaaaatttgtcatgtgctgttctgtcttgtgttgta 26282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 49748926 - 49749025
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| | |||||||| ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  49748926 aaaccacaacacaactttttgtcccacgtacaagttgttttaaataccaaaata-acatttcgtcccccaaaaatcgtataaaacaaaaaattattcaat 49749024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 20609663 - 20609717
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  20609663 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 20609717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 21221375 - 21221482
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  ||||||| |||||| || ||||||||||||||    
T  21221375 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaattgtataaaacaaaaaattactcaat 21221473  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  21221474 gccataaaa 21221482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 21374000 - 21373946
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  21374000 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 21373946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 25860436 - 25860543
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||||||||||| |||||||||||| ||| ||||||  ||||||       || | ||||||||||||||| || |||||||||||| |    
T  25860436 aaaccacatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatag-cattttgttctccaaaaatcgtataaaacaaaaaattactcatt 25860534  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  25860535 gccataaaa 25860543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 34026737 - 34026630
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||| ||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  34026737 aaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 34026639  T
Q  340 gctataaaa 348  Q
     | ||||||    
T  34026638 accataaaa 34026630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 44000235 - 44000193
Alignment:
Q  386 aataccataaaagtttgtattgtgttgttttgtcttgtgatgt 428  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  44000235 aataccataaaagtttgtcttgtattgttttgtcttgtgatgt 44000193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 42636418 - 42636471
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  42636418 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 42636471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 25927351 - 25927395
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  25927351 cacaactttttgtcccacgtacaagttgtctaaaataccaaaata 25927395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 379
Target Start/End: Complemental strand, 43999977 - 43999941
Alignment:
Q  343 ataaaagtttgtcttgtattgttttgtcttgtgatgt 379  Q
    ||||||||||||||||| |||||||||||||||||||    
T  43999977 ataaaagtttgtcttgtgttgttttgtcttgtgatgt 43999941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 51259804 - 51259848
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  51259804 cacaactttttgtcccacgtacaagttgtctaaaataccaaaata 51259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 42547384 - 42547423
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatc 278  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  42547384 taaactacaacacaactttttgtctcacgtacaagttatc 42547423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 3964358 - 3964304
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| |||||| |||||||    
T  3964358 aaaccacagcacaactttttgtcccatgtacaagttgtctaaaataccaaaatag 3964304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 8648571 - 8648625
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||||||||||||||||||||||| || |||||| || ||| |||||| ||||||    
T  8648571 taaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaata 8648625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 50678868 - 50678814
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  50678868 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 50678814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 45690977 - 45691029
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtc 355  Q
    |||| ||||||||||||||| || |||||||| |||||||||||||| ||||||    
T  45690977 gtcctccaaaaatcgtataaaac-aaaaattattcaatgctataaaaatttgtc 45691029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 10747221 - 10747169
Alignment:
Q  307 ccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgt 359  Q
    ||||||||||||||| || |||||||| ||||||  |||||| ||||||||||    
T  10747221 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcttgt 10747169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 53046723 - 53046763
Alignment:
Q  308 caaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  53046723 caaaaatcgtataaaacaaaaaattactcaatgccataaaa 53046763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 353
Target Start/End: Original strand, 16595194 - 16595297
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||       || ||||||||||||||||||||||||||||| ||||| | | ||||    
T  16595194 cacaactttttgtcccacgtacaagttatctaaaatacaaaaatag-ctttttgttcaccaaaaatcgtataagaccaaaaattattcaataccaaaaaa 16595292  T
Q  349 gtttg 353  Q
    |||||    
T  16595293 gtttg 16595297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 375
Target Start/End: Original strand, 29672359 - 29672494
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  29672359 aaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 29672457  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtg 375  Q
    || || |||| |||||| ||| ||||| |||||||||    
T  29672458 gccatgaaaaatttgtcctgtgttgttctgtcttgtg 29672494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 382
Target Start/End: Original strand, 12753361 - 12753503
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| ||||||        |||| ||||||||||||||| || | ||||||||||||    
T  12753361 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacaacaaattactcaat 12753459  T
Q  340 gctataaaa-gtttgtcttgtattgttttgtcttgtgatgtatt 382  Q
    || ||||||  |||||| ||| ||||| ||||||||| ||||||    
T  12753460 gccataaaatttttgtcatgtgttgttctgtcttgtgttgtatt 12753503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 29563262 - 29563369
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  29563262 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 29563360  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  29563361 gccataaaa 29563369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 41709846 - 41709739
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||| ||||||||||||||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  41709846 aaaccacagcacaactttttgtccaacgtacaagttatctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 41709748  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  41709747 gccataaaa 41709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 45446524 - 45446417
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  45446524 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 45446426  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  45446425 gccataaaa 45446417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 8673091 - 8673231
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||| ||||| || ||||||||||||||    
T  8673091 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaat 8673189  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||  ||||||| |||||| ||||    
T  8673190 gccataaaaattttgtcctgtgctgttttgccttgtgttgta 8673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 6386645 - 6386538
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  6386645 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 6386547  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  6386546 gccataaaa 6386538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 15001535 - 15001481
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  15001535 aaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatag 15001481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 32020037 - 32020144
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||| ||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  32020037 aaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 32020135  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  32020136 gccataaaa 32020144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 32303621 - 32303728
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||| ||||| || ||||||||||||||    
T  32303621 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaat 32303719  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  32303720 gccataaaa 32303728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 34063197 - 34063090
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| |||||    
T  34063197 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 34063099  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  34063098 gccataaaa 34063090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 37664319 - 37664373
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  37664319 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 37664373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 375
Target Start/End: Complemental strand, 35225731 - 35225597
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||||||||||| || ||||||||| ||| ||||||||||||||       |||  ||||||||| ||||| ||   |||||| |||||    
T  35225731 aaaccacatcacaactttttgtcacaagtacaagttgtctaaaatacaaaaatag-catttcgtcacccaaaaatcatataaaacaggaaattattcaat 35225633  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
     | |||||| |||||||||| ||||| |||||||||    
T  35225632 accataaaaatttgtcttgtgttgttctgtcttgtg 35225597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 380
Target Start/End: Original strand, 13406986 - 13407111
Alignment:
Q  255 tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaaagtttg 353  Q
    |||||||| |||||||||||| ||| |||||| |||||||       || | ||||||||||||||| || ||||||||||||||||||| |||| ||||    
T  13406986 tttttgtctcacgtacaagttgtctaaaataccaaaatagcatttt-gtgccccaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttg 13407084  T
Q  354 tcttgtattgttttgtcttgtgatgta 380  Q
    || ||| ||||| || |||||| ||||    
T  13407085 tcatgtgttgttctgccttgtgttgta 13407111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 30543058 - 30543198
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||| |||||||||||||||| ||| |||||| ||||||        |||| ||||||||||||||| ||  |||||||||||||    
T  30543058 aaaccacaacacaacttttcgtcccacgtacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacataaaattactcaat 30543156  T
Q  340 gctataaaa-gtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || ||||||  |||||| ||| ||||| || |||||| ||||    
T  30543157 gccataaaatatttgtcctgtgttgttctgccttgtgttgta 30543198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 54240 - 54189
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaa 290  Q
    ||||| |||||||||||||||||||||| |||||||||||  ||||||||||    
T  54240 taaaccacatcacaactttttgtcccacatacaagttatcgaaaatacaaaa 54189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 3251692 - 3251799
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||| ||| ||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || ||||||||||||||    
T  3251692 aaaccacatcacaactttttatcctacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 3251790  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  3251791 gccataaaa 3251799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 4052549 - 4052444
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| ||  |||||||||||||    
T  4052549 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaac--aaaattactcaat 4052453  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  4052452 gccataaaa 4052444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 31513619 - 31513759
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||| | ||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  31513619 aaaccacagcacaactttttgtcctaggtacaagttgtctaaaataccaaaatagcatttt-gtccttcaaaaatcgtataaaacaaaaaattactcaat 31513717  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  31513718 gccataaaaaatttgtcatgtgttgttctgccttgtgttgta 31513759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 21272753 - 21272699
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  21272753 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatag 21272699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 3800976 - 3801033
Alignment:
Q  237 attaaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    ||||||| |||||||||||||||||  ||| ||| |||||||| ||||||||||||||    
T  3800976 attaaaccacatcacaactttttgtttcacatactagttatctaaaatacaaaaatag 3801033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 10467133 - 10467019
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||| || ||    
T  10467133 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattctat 10467035  T
Q  340 gctataaaagtttgtc 355  Q
    |  |||||| ||||||    
T  10467034 gtcataaaaatttgtc 10467019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 14005080 - 14005133
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  14005080 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata 14005133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 22756456 - 22756501
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||    
T  22756456 cacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 22756501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 25478303 - 25478205
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||| ||||||||||| ||| |||||| |||||||       ||||   ||||||||||||| || |||||||||||||||| ||||||    
T  25478303 cacaactttttgtcctacgtacaagttgtctaaaataccaaaatag-tattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaa 25478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 27104019 - 27103921
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||  |||||||       ||||  |||||||| ||||| || |||||||||||||||| ||||||    
T  27104019 cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa 27103921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 30501214 - 30501161
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||||||||||||||||||||||||  || |||||||||||||    
T  30501214 aaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaata 30501161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 347
Target Start/End: Original strand, 37618428 - 37618534
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| | |||||||| |||||||       |||| |||||||| |||||| || |||||||| |||||    
T  37618428 aaaccacaacacaactttttgtctcacgtacaagttgttttaaataccaaaatag-catttcgtcccccaaaaattgtataaaacaaaaaattattcaat 37618526  T
Q  340 gctataaa 347  Q
    || |||||    
T  37618527 gccataaa 37618534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 355
Target Start/End: Complemental strand, 41548678 - 41548573
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||  ||||||        |||| ||||||||||||||| || |||||||| ||||||  ||||||    
T  41548678 cacaactttttgtcccacgtacaagttgtctaaaatatcaaaata-acattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaa 41548580  T
Q  349 gtttgtc 355  Q
     ||||||    
T  41548579 atttgtc 41548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 352
Target Start/End: Original strand, 5859518 - 5859619
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaag 349  Q
    |||||||||||||  ||||||||||||||| |||||| |||||||       |||||  ||||||| ||||||||||| ||||| ||||| | |||||||    
T  5859518 acaactttttgtcatacgtacaagttatctaaaatactaaaatag-tattttgtccataaaaaatcttataagaccaataattaatcaatacaataaaag 5859616  T
Q  350 ttt 352  Q
    |||    
T  5859617 ttt 5859619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 31732123 - 31732026
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||| ||| |||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  31732123 acaactttttgtctcacatacaagttgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 31732026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 5968900 - 5969007
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| |||||||||||| || ||| |||||| ||||||        ||||  |||||||||||||| || ||||||||||||||    
T  5968900 aaaccacagcacaactttttatcccacgtacaaattgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 5968998  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  5968999 gccataaaa 5969007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 16485845 - 16485899
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  16485845 aaaccacagcacaactttttgtcctacgtataagttttctaaaatacaaaaatag 16485899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 18297469 - 18297534
Alignment:
Q  309 aaaaatcgtataagaccaaaaattactc-aatgctataaaagtttg-tcttgtattgttttgtctt 372  Q
    ||||||||||||||||||||||||| || ||| | |||||| |||| |||||||||||||| ||||    
T  18297469 aaaaatcgtataagaccaaaaattattcaaataccataaaattttgttcttgtattgttttatctt 18297534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 7394859 - 7394903
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||||||||||||| |||||||||||| ||| |||||| ||||||    
T  7394859 cacaactttttgtctcacgtacaagttgtctaaaataccaaaata 7394903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 35225635 - 35225587
Alignment:
Q  386 aataccataaaagtttgtattgtgttgttttgtcttgtgatgttttgtc 434  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||| |||||    
T  35225635 aataccataaaaatttgtcttgtgttgttctgtcttgtgttgtgttgtc 35225587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 365
Target Start/End: Original strand, 27824715 - 27824834
Alignment:
Q  245 acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat 344  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||       ||||| |||||||| ||||||| ||||||||| ||||| | ||    
T  27824715 acatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatag-ctttttgtccaacaaaaatcatataagatcaaaaattattcaataccat 27824813  T
Q  345 aaaagtttgtcttgtattgtt 365  Q
    ||||||||||| |||||||||    
T  27824814 aaaagtttgtcatgtattgtt 27824834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 375
Target Start/End: Complemental strand, 10960069 - 10959935
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||       |||| ||||||||||||||| || ||| || | |||||    
T  10960069 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatag-cattttgtcccccaaaaatcgtataaaacaaaatatcattcaat 10959971  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    || |||||| |||||| ||| ||||| || ||||||    
T  10959970 gccataaaaatttgtcatgtgttgttctgccttgtg 10959935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 3932867 - 3933007
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || |||||||| |||||    
T  3932867 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 3932965  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||  |||||||||||||| ||||    
T  3932966 gccataaaaaatttgtcctgtgctgttttgtcttgtgttgta 3933007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 15277340 - 15277447
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||| ||||||||||||||| ||| |||||| |||||||       |||  ||||||||||||||| || | ||||||||||||    
T  15277340 aaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaatag-cattttgtcttccaaaaatcgtataaaacaacaaattactcaat 15277438  T
Q  340 gctataaaa 348  Q
    |||||||||    
T  15277439 gctataaaa 15277447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 24242733 - 24242634
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  24242733 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 24242635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 29424626 - 29424743
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    ||||| ||| ||||| |||| | || ||||||||||||||| ||||||||||||||       |||||||||||| |||| |||||||||||||| ||||    
T  29424626 taaacgacaacacaatttttagacctacgtacaagttatctaaaatacaaaaatagtttttt-gtccaccaaaaaacgtacaagaccaaaaattattcaa 29424724  T
Q  339 tgctataaaagtttgtctt 357  Q
    | | ||||||||| |||||    
T  29424725 taccataaaagttcgtctt 29424743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 2614965 - 2614825
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| |  ||||||||||||||    
T  2614965 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaataaaaaattactcaat 2614867  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  2614866 gccataaaaaatttgtcatgtgttgttctgccttgtgttgta 2614825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 17867904 - 17867764
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||||||||| || ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  17867904 aaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 17867806  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  17867805 gccataaaaaatttgtcctgtgttgttctgccttgtgttgta 17867764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 17877687 - 17877547
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||||||||| || ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  17877687 aaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 17877589  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  17877588 gccataaaaaatttgtcctgtgttgttctgccttgtgttgta 17877547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 365
Target Start/End: Original strand, 31870160 - 31870284
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||| | ||| ||| ||||||||||||||       |||| |||||| |||||||| || |||||||| |||||    
T  31870160 aaaccacaacacaactttttgtcccacgtataggttgtctaaaatacaaaaatag-catttcgtcccccaaaactcgtataaaacaaaaaattattcaat 31870258  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    || |||||| |||||| ||| |||||    
T  31870259 gccataaaaatttgtcatgtgttgtt 31870284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 3259752 - 3259645
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  3259752 aaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 3259654  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  3259653 gccataaaa 3259645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 11613851 - 11613958
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| | | |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  11613851 aaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 11613949  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  11613950 gccataaaa 11613958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 7396194 - 7396239
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||    
T  7396194 cacaactttttgtctcacgtacaagttatctaaaatacaaaaatag 7396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 32132449 - 32132547
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || | |||||||||||||| ||||||    
T  32132449 cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaa 32132547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 34176890 - 34176792
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||  ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  34176890 cacaactttttgtcccacgtacaagtagtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 34176792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 9902715 - 9902771
Alignment:
Q  237 attaaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  9902715 attaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 9902771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 366
Target Start/End: Complemental strand, 10485226 - 10485101
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  10485226 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaat 10485128  T
Q  340 gctataaaagtttgtcttgtattgttt 366  Q
    |  |||||  |||||| ||| ||||||    
T  10485127 gtcataaatatttgtcctgtgttgttt 10485101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 166983 - 167037
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  166983 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 167037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 28068819 - 28068753
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttg 368  Q
    ||||||||||| | ||||||||||||||||||  |||| |||||||||||| |||| | ||||||||    
T  28068819 gtccaccaaaagtggtataagaccaaaaattatacaatactataaaagtttctcttatgttgttttg 28068753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 24203431 - 24203378
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  24203431 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 24203378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 32614059 - 32614112
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtc 355  Q
    ||||||||||||||||||||||||||||||||   ||| | |||||||||||||    
T  32614059 gtccaccaaaaatcgtataagaccaaaaattatataataccataaaagtttgtc 32614112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 10552785 - 10552710
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactca--atgctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    |||||||||||||||||||||| ||||||||| |||  ||   ||||||||||||||| | || ||||||||||||    
T  10552785 gtccaccaaaaatcgtataagatcaaaaattattcaatatatcataaaagtttgtcttatgttattttgtcttgtg 10552710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 17443321 - 17443277
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||    
T  17443321 acaactttttgtcccacgtacaagttgtctaaaataccaaaatag 17443277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 18057578 - 18057534
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||    
T  18057578 acaactttttgtcccacgtacaagttgtctaaaataccaaaatag 18057534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 10324171 - 10324278
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| ||||||        |||| | ||||||||||||| || ||||||||||||||    
T  10324171 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaata-acattttgtccccaaaaaatcgtataaaacaaaaaattactcaat 10324269  T
Q  340 gctataaaa 348  Q
     | ||||||    
T  10324270 cccataaaa 10324278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 445
Target Start/End: Original strand, 8342783 - 8342829
Alignment:
Q  399 tttgtattgtgttgttttgtcttgtgatgttttgtctagtatatact 445  Q
    |||||||||||||||||| ||||||| ||| |||||||||| |||||    
T  8342783 tttgtattgtgttgttttttcttgtgttgtattgtctagtacatact 8342829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 11279197 - 11279143
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  11279197 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 11279143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 11382133 - 11382079
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  11382133 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 11382079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 29054425 - 29054375
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaa 290  Q
    |||| ||| |||||||||||||| |||||||||||| ||| ||||||||||    
T  29054425 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaatacaaaa 29054375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 32409912 - 32409966
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||||||||||||||||||||||  ||||||| ||| |||||| |||||||    
T  32409912 aaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatag 32409966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 3379770 - 3379725
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||| ||| |||||||| |||||||||| |||||||    
T  3379770 cacaactttttgtctcacatacaagttgtcttaaataccaaaatag 3379725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 8177941 - 8177994
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||||||||||||||||| |||||| ||| |||||| ||||||    
T  8177941 aaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaata 8177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 32860120 - 32860067
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||| ||||||| |||||||||||| ||| |||||||||||||    
T  32860120 aaaccacagcacaaccttttgtctcacgtacaagttttctaaaatacaaaaata 32860067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 4494185 - 4494221
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatac 286  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  4494185 acaactttttgtcccacgtacaagttgtctaaaatac 4494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 14925526 - 14925570
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||    
T  14925526 acaactttttgtcccacttacaagttgtctaaaataccaaaatag 14925570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 7001865 - 7001792
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||| |||||||||    
T  7001865 gtccaccaaaaatcgtataagaccaaaaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtg 7001792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 33552856 - 33552996
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  33552856 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 33552954  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| |||||||| |||||| ||||    
T  33552955 gccataaaaaatttgtcctgtgttgttttgccttgtgttgta 33552996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 44324356 - 44324470
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| | |||||||| |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  44324356 aaaccacagcacaactttttgtcccacgtacaagttgttttaaataccaaaatag-catttcgtcccccaaaaatcgtataaaacaaaaaattattcaat 44324454  T
Q  340 gctataaaagtttgtc 355  Q
    || |||||| ||||||    
T  44324455 gccataaaaatttgtc 44324470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 341
Target Start/End: Complemental strand, 24002411 - 24002310
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  24002411 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaat 24002312  T
Q  340 gc 341  Q
    ||    
T  24002311 gc 24002310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 20802545 - 20802685
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||| ||||| || ||||||||||||||    
T  20802545 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaat 20802643  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  20802644 gccataaaaaatttgtcctgtgttgttctgccttgtgttgta 20802685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 385
Target Start/End: Original strand, 55065347 - 55065491
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  55065347 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatttt-gtccttcaaaaatcgtataaaacaaaaaattactcaat 55065445  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgtgatgtattatt 385  Q
    || |||||| |||||| |||  |||| || |||||| |||| ||||    
T  55065446 gccataaaaatttgtcctgtgctgttctgccttgtgttgtactatt 55065491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 23521952 - 23521845
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  23521952 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 23521854  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  23521853 gccataaaa 23521845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 43641171 - 43641064
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  43641171 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 43641073  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  43641072 gccataaaa 43641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 381
Target Start/End: Complemental strand, 24210391 - 24210249
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  24210391 aaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaat 24210292  T
Q  340 gctataaaa-gtttgtcttgtattgttttgtcttgtgatgtat 381  Q
     | ||||||  |||||| ||| ||||| || |||||| |||||    
T  24210291 accataaaatatttgtcatgtgttgttctgccttgtgttgtat 24210249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 385
Target Start/End: Original strand, 36743702 - 36743847
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  ||||||| |||||| || | ||||||||||||    
T  36743702 aaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaattgtataaaacaacaaattactcaat 36743800  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgtattatt 385  Q
    || || |||| ||||||||||  |||| || ||| || |||||||||    
T  36743801 gccataaaaaatttgtcttgtgctgttctgccttatgttgtattatt 36743847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 56154693 - 56154553
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||| ||||| || ||||||||||||||    
T  56154693 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaat 56154595  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||| |||| || |||||| ||||    
T  56154594 gccataaaaaatttgtcatgtactgttctgccttgtgttgta 56154553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 9512354 - 9512461
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||| ||||| || ||||||||||||||    
T  9512354 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaat 9512452  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  9512453 gccataaaa 9512461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 37695555 - 37695673
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||| ||| ||| |||||  ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  37695555 aaaccacaacacaactttttgtcccacgtacaggttgtctaaaatatcaaaata-acatttcgtcccccaaaaatcgtataaaacaaaaaattattcaat 37695653  T
Q  340 gctataaaagtttgtcttgt 359  Q
    || |||||| ||||||||||    
T  37695654 gccataaaaatttgtcttgt 37695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 4325854 - 4325756
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||       |||| |||||||||| |||| || |||||||||||| ||| ||||||    
T  4325854 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaaaaatcgcataaaacaaaaaattactcattgccataaaa 4325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 373
Target Start/End: Complemental strand, 9435472 - 9435338
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaa-gttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactca 337  Q
    ||||| |||||||||||||||| || |  ||||| ||||||| ||||||||||||||       ||| ||||||||| |||||||||||||||| | |||    
T  9435472 taaaccacatcacaactttttgaccaatatacaaagttatctaaaatacaaaaatagcttttt-gtctaccaaaaatggtataagaccaaaaataattca 9435374  T
Q  338 atgctataaaagtttgtcttgtattgttttgtcttg 373  Q
    ||   ||||||||||||| ||| ||||| |||||||    
T  9435373 atatcataaaagtttgtcgtgtgttgttctgtcttg 9435338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 42870028 - 42869938
Alignment:
Q  258 ttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||| ||||| ||| ||||||||||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  42870028 ttgtcccacgtataagttgtctaaaatacaaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 42869938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 33177046 - 33177186
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||| ||||||| ||| |||||| ||||||        |||| ||||||||||||||| ||  |||||||||||||    
T  33177046 aaaccacaacacaactttttgtcccacgcacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacataaaattactcaat 33177144  T
Q  340 gctataaaa-gtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || ||||||  |||||| | | ||||| ||||||||| ||||    
T  33177145 gccataaaatatttgtcctttgttgttctgtcttgtgttgta 33177186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 55593957 - 55593817
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || ||||||||||||||    
T  55593957 aaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 55593859  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| ||||| ||| |||||| || |||||| ||||    
T  55593858 gccataaaaaatttgttttgcattgttctgccttgtgttgta 55593817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 21580098 - 21579958
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||||||||||| ||||||||| || ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  21580098 aaaccacatcacaactttttgtctcacgtacaaattgtctaaaataccaaaatag-catgttgtccctcaaaaatcgtataaaactaaaaattactcaat 21580000  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
     | || |||| |||||| ||| ||||| || |||||| ||||    
T  21579999 accataaaaaatttgtcctgtgttgttctgccttgtgttgta 21579958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 380
Target Start/End: Complemental strand, 29616233 - 29616102
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa 347  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||        ||||   ||||||||||||| || |||||||||||||||| || |||    
T  29616233 cacaactttttgtcccacgtacaaattgtctaaaataccaaaata-acattttgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaaa 29616135  T
Q  348 agtttgtcttgtattgttttgtcttgtgatgta 380  Q
    | |||||| ||| ||||| ||||||||| ||||    
T  29616134 aatttgtcatgtgttgttctgtcttgtgttgta 29616102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 50727927 - 50728034
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || |||||||| |||||    
T  50727927 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 50728025  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  50728026 gccataaaa 50728034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 50735941 - 50736048
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || |||||||| |||||    
T  50735941 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 50736039  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  50736040 gccataaaa 50736048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 2725147 - 2725245
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||| ||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  2725147 aaaccacatcacaactttttgt-ccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 2725244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 21202811 - 21202705
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||||||| |    
T  21202811 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcc-ccaaaaatcgtataaaacaaaaaattactcatt 21202714  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  21202713 gccataaaa 21202705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 29785551 - 29785658
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||| |||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| |||||    
T  29785551 aaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 29785649  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  29785650 gccataaaa 29785658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 31445889 - 31445943
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||| |||||||||||||||| | ||||||||| |||||| |||||||||||||    
T  31445889 taaacaacatcacaactttttgccacacgtacaaattatctaaaatacaaaaata 31445943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 38812592 - 38812538
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  38812592 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 38812538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 47642505 - 47642604
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  47642505 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaat 47642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 375
Target Start/End: Original strand, 7554980 - 7555105
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||| |||||||||||| ||| |||  | |||||||       | || ||||||||||||||| || |||||||| ||||||| ||||||    
T  7554980 cacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagcatttcgg-cctccaaaaatcgtataaaacaaaaaattattcaatgccataaaa 7555078  T
Q  349 gtttgtcttgtattgttttgtcttgtg 375  Q
     |||||| |||  |||| |||||||||    
T  7555079 atttgtcgtgtgatgttctgtcttgtg 7555105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 365
Target Start/End: Complemental strand, 16320591 - 16320469
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||| |||  || ||||||||||||||        ||| |||||| |||||||| ||  ||||||| |||||    
T  16320591 aaaccacaacacaactttttgtcccacgtacaggttgcctaaaatacaaaaatagaatttca-tcccccaaaactcgtataaaac--aaaattattcaat 16320495  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    || |||||| |||||||||| |||||    
T  16320494 gccataaaaatttgtcttgtgttgtt 16320469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 40792484 - 40792435
Alignment:
Q  245 acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||||||  || ||||||||||||| ||||||||||||||    
T  40792484 acatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatag 40792435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 41720903 - 41720862
Alignment:
Q  252 aactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  41720903 aactttttgtcccacgtacaaattatctaaaatacaaaaata 41720862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 52949792 - 52949679
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| | ||||||||| |||||    
T  52949792 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataa-aacaaaaattattcaat 52949695  T
Q  340 gctataaaagtttgtc 355  Q
    |  |||||| ||||||    
T  52949694 gtcataaaaatttgtc 52949679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 382
Target Start/End: Complemental strand, 985293 - 985214
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtgatgtatt 382  Q
    ||||| |||||||| ||||||||||||||||| ||||  | |||||| |||||||| |  |||||||||||||| ||||||    
T  985293 gtccagcaaaaatcatataagaccaaaaattattcaa-accataaaaatttgtcttatgatgttttgtcttgtgttgtatt 985214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 14296654 - 14296562
Alignment:
Q  255 tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||| ||| |||||| ||||||        |||  ||||||||||||||| || |||||||||||||||| ||||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaa 14296562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 14314902 - 14314810
Alignment:
Q  255 tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||| ||| |||||| ||||||        |||  ||||||||||||||| || |||||||||||||||| ||||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaa 14314810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 20644319 - 20644379
Alignment:
Q  305 caccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgtt 365  Q
    ||||||||||||||||| | ||||||||| ||||||| |||||||| |||| ||| |||||    
T  20644319 caccaaaaatcgtataaaatcaaaaattattcaatgcgataaaagtgtgtcatgtgttgtt 20644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 32181325 - 32181281
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||    
T  32181325 acaactttttgtcccacgtacaagttgtctaaaataccaaaatag 32181281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 355
Target Start/End: Complemental strand, 9807218 - 9807114
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaag 349  Q
    |||||||||||||| ||||||||||| ||| |||||| |||||||       |||| ||||||||||||||| ||  ||||||| ||||||| ||| ||     
T  9807218 acaactttttgtcctacgtacaagttgtctaaaataccaaaatag-catttcgtcctccaaaaatcgtataaaacataaaattattcaatgccatacaaa 9807120  T
Q  350 tttgtc 355  Q
    ||||||    
T  9807119 tttgtc 9807114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 49152114 - 49152220
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||| ||| ||| || ||||||        ||||| |||||||||||||| || ||||||||||||||    
T  49152114 aaaccacaacacaactttttatcccacgtacaagttgtctaaaa-accaaaata-acattttgtccatcaaaaatcgtataaaacaaaaaattactcaat 49152211  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  49152212 gccataaaa 49152220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 2629972 - 2630018
Alignment:
Q  247 atcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||||||||||||||| |||||||||||| ||| |||||| ||||||    
T  2629972 atcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 2630018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 12600958 - 12600904
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  12600958 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 12600904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 28115324 - 28115270
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| |||||||    
T  28115324 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatag 28115270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 347
Target Start/End: Complemental strand, 42772818 - 42772724
Alignment:
Q  252 aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaa 347  Q
    |||||||||||||||||| ||||||||| |||||| ||||||         ||| ||||||||| ||||| || |||||||||||||||| |||||    
T  42772818 aactttttgtcccacgtataagttatctaaaataccaaaata-acattttttcctccaaaaatcatataaaacaaaaaattactcaatgccataaa 42772724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 50186600 - 50186546
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  50186600 aaaccacaacacaactttttatcccacatacaagttgtctaaaatacaaaaatag 50186546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 50729556 - 50729610
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  50729556 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 50729610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 1231383 - 1231338
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaata 285  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||    
T  1231383 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 1231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 3649708 - 3649655
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| || ||||||    
T  3649708 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 3649655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 37865816 - 37865771
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    ||||||||||||||||| ||||||||| ||| |||||| |||||||    
T  37865816 cacaactttttgtcccatgtacaagttgtctaaaataccaaaatag 37865771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 45577705 - 45577758
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaat 292  Q
    ||||| ||| |||||||||||||||||||| |||||| ||| |||||| |||||    
T  45577705 taaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaat 45577758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 2787037 - 2786997
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatct 279  Q
    ||||| ||||||||| |||||||||||||||||| ||||||    
T  2787037 taaaccacatcacaaatttttgtcccacgtacaaattatct 2786997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 52319395 - 52319351
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaat 284  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  52319395 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaat 52319351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 385
Target Start/End: Complemental strand, 29661396 - 29661251
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||||||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  29661396 aaaccacagcacaactttttatcccacgtacaagttatctaaaataccaaaatagcatttt-gtcccacaaaaatcgtataaaacaaaaaattactcaat 29661298  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgtattatt 385  Q
    ||||| |||| |||||||||| ||||| || |||||| |||| ||||    
T  29661297 gctataaaaaatttgtcttgtgttgttctgccttgtgttgtactatt 29661251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 46633770 - 46633630
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  46633770 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 46633672  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||||||| ||||| || |||||| ||||    
T  46633671 gccataaaaaatttgtcttgtgttgttctgccttgtgttgta 46633630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 10932579 - 10932686
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  10932579 aaactacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 10932677  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  10932678 gccataaaa 10932686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 374
Target Start/End: Complemental strand, 34117525 - 34117392
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||| ||||||| ||| ||||||||| ||| |||| | |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  34117525 aaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttc-gtcccccaaaaatcgtataaaacgaaaaattattcaat 34117427  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgt 374  Q
    || |||||| |||||||||| ||||| ||||||||    
T  34117426 gccataaaaatttgtcttgtgttgttctgtcttgt 34117392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 11321907 - 11322047
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  11321907 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 11322005  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||| |||| || |||||| ||||    
T  11322006 gccataaaaaatttgtcatgtactgttctgccttgtgttgta 11322047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 349
Target Start/End: Complemental strand, 21784944 - 21784836
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       |||| ||||||||||||||| ||  |||||||||||||    
T  21784944 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcctccaaaaatcgtataaaacataaaattactcaat 21784846  T
Q  340 gctataaaag 349  Q
    || |||||||    
T  21784845 gccataaaag 21784836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 3922725 - 3922832
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||       ||||  |||||||||||||| || ||||| ||||||||    
T  3922725 aaaccacagcacaactttttgtcccacgtacaagttatctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaaatactcaat 3922823  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  3922824 gccataaaa 3922832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 29372863 - 29372925
Alignment:
Q  303 tccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgtt 365  Q
    ||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||    
T  29372863 tccaccaaaaatcatataagaccaaaaattatttaataccataaaagtttgtcttgtattgtt 29372925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 47953263 - 47953156
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  47953263 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 47953165  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  47953164 gccataaaa 47953156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 382
Target Start/End: Complemental strand, 18386598 - 18386456
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  18386598 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 18386500  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgtatt 382  Q
    |  || |||| |||||| ||| ||||| || |||||| ||||||    
T  18386499 gtcataaaaaatttgtcatgtgttgttctgccttgtgttgtatt 18386456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 40753219 - 40753121
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  40753219 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 40753121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 47947824 - 47947726
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 47947726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 44748758 - 44748661
Alignment:
Q  250 acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||       |||| ||||||||||||||| || |||||||||||| ||| ||||||    
T  44748758 acaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaa 44748661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 32873791 - 32873931
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  32873791 aaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 32873889  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||| ||||| || |||||| ||||    
T  32873890 gccataaaaaatttgtcatgtgttgttctgccttgtgttgta 32873931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 41211222 - 41211330
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||        |||   ||||||||||||| || ||||||||||||||    
T  41211222 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttttatccctaaaaaatcgtataaaacaaaaaattactcaat 41211321  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  41211322 gccataaaa 41211330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 43158708 - 43158848
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| |  |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  43158708 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaacatcaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaat 43158806  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||| |||| ||||||||| ||||    
T  43158807 gccataaaaaatttgtcctgtactgttctgtcttgtgttgta 43158848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 26994247 - 26994354
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||   ||||||||||||| || ||||||||||||||    
T  26994247 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctaaaaaatcgtataaaacaaaaaattactcaat 26994345  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  26994346 gccataaaa 26994354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 36769591 - 36769698
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       |||   |||||||||||||| || ||||||||||||||    
T  36769591 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtctctcaaaaatcgtataaaacaaaaaattactcaat 36769689  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  36769690 gccataaaa 36769698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 41665597 - 41665651
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  41665597 aaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatag 41665651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 26371840 - 26371938
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| ||||||| ||||||    
T  26371840 cacaactttttgtcccacgtacaagttgtctaaaatactaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa 26371938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 26652939 - 26652825
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||||||||| || |||||||| |||||    
T  26652939 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccgccaaaaatcgtataaaacaaaaaattattcaat 26652841  T
Q  340 gctataaaagtttgtc 355  Q
    |  |||||| ||||||    
T  26652840 gtcataaaaatttgtc 26652825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 29992729 - 29992813
Alignment:
Q  252 aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    ||||||||||| |||||||||||||||| ||||||||||  |        |||||||||||||||||||||||||||||||| ||||    
T  29992729 aactttttgtctcacgtacaagttatctaaaatacaaaataa--ttttttgtccaccaaaaatcgtataagaccaaaaattattcaa 29992813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 34295426 - 34295544
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       |||| ||||||||| ||||| || |||||||| |||||    
T  34295426 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcatataaaacaaaaaattattcaat 34295524  T
Q  340 gctataaaagtttgtcttgt 359  Q
    |  |||||| ||||||||||    
T  34295525 gtcataaaaatttgtcttgt 34295544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 9913598 - 9913484
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||| ||||||||||| ||| ||| |||||| ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  9913598 aaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaata-acatttcgtcccccaaaaatcgtataaaactaaaaattattcaat 9913500  T
Q  340 gctataaaagtttgtc 355  Q
     | |||||| ||||||    
T  9913499 tccataaaaatttgtc 9913484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 9927286 - 9927172
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||| ||||||||||| ||| ||| |||||| ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  9927286 aaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaata-acatttcgtcccccaaaaatcgtataaaactaaaaattattcaat 9927188  T
Q  340 gctataaaagtttgtc 355  Q
     | |||||| ||||||    
T  9927187 tccataaaaatttgtc 9927172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 34519581 - 34519527
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  34519581 aaaccacaacacaactttttgtcccaggtacaagttgtctaaaatacaaaaatag 34519527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 375
Target Start/End: Complemental strand, 329543 - 329409
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||||||||||||||||||||||||  || ||| || |||||||       |||| ||||||||| ||||| || | |||||| |||||    
T  329543 aaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatag-cattttgtcccccaaaaatcatataaaacaagaaattattcaat 329445  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
     | |||||| |||||| |||| |||| || ||||||    
T  329444 accataaaaatttgtcatgtactgttatgccttgtg 329409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 30849268 - 30849408
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||  |||||||| | | |||||| ||||||        |||| ||||||||||||||| || ||||||||||||||    
T  30849268 aaaccacaacacaactttttgtcccatatacaagttgtataaaataccaaaata-acattttgtcccccaaaaatcgtataaaacaaaaaattactcaat 30849366  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || ||||  ||||| ||| ||||| ||||||||| ||||    
T  30849367 gccataaaaaaattgtcctgtgttgttctgtcttgtgttgta 30849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 365
Target Start/End: Complemental strand, 1363709 - 1363586
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| |||||||||||||||||| |||||||| ||| ||  ||||||||||||||       || | |||||||| |||||| || |||||||| |||||    
T  1363709 aaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatag-catttcgtac-ccaaaaattgtataaaacaaaaaattattcaat 1363612  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    || |||||| |||||| ||| |||||    
T  1363611 gccataaaaatttgtcatgtgttgtt 1363586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 18470745 - 18470650
Alignment:
Q  252 aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||| ||||| || |||||||||||||||| ||||||    
T  18470745 aactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa 18470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 22724564 - 22724607
Alignment:
Q  251 caactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||    
T  22724564 caactttatgtcccacgtacaagttgtctaaaatacaaaaatag 22724607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 23349313 - 23349427
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| ||||| |       |||| |||| ||||||| || || |||||||| |||||    
T  23349313 aaaccacaacacaactttttgtcccacatacaagttgtctaaaatactaaaat-gacatttcgtcccccaacaatcgtagaaaacaaaaaattattcaat 23349411  T
Q  340 gctataaaagtttgtc 355  Q
    | ||||||| ||||||    
T  23349412 gttataaaaatttgtc 23349427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 26910432 - 26910486
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||  ||||||||||||||    
T  26910432 aaaccacaacacaactttttgtcacacgtacaagttgtcaaaaatacaaaaatag 26910486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 29455937 - 29455995
Alignment:
Q  310 aaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttg 368  Q
    |||||| |||||||||||| |||| ||||| | ||||||||||||| ||| ||||||||    
T  29455937 aaaatcatataagaccaaatattattcaataccataaaagtttgtcatgtgttgttttg 29455995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 37967042 - 37967008
Alignment:
Q  245 acatcacaactttttgtcccacgtacaagttatct 279  Q
    ||||||||||||||||| |||||||||||||||||    
T  37967042 acatcacaactttttgttccacgtacaagttatct 37967008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 1870208 - 1870163
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaata 285  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||    
T  1870208 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaata 1870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 47316787 - 47316844
Alignment:
Q  308 caaaaatcgtataagaccaaaaattactcaatgctat-aaaagtttgtcttgtattgt 364  Q
    |||||||||||||| || |||||||||||||||| || |||| |||||||||| ||||    
T  47316787 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgt 47316844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 48894791 - 48894758
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaa 272  Q
    ||||| ||||||||||||||||||||||||||||    
T  48894791 taaaccacatcacaactttttgtcccacgtacaa 48894758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 20127362 - 20127330
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaa 272  Q
    |||| ||||||||||||||||||||||||||||    
T  20127362 aaaccacatcacaactttttgtcccacgtacaa 20127330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 39788262 - 39788154
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||        |||| ||||||||||||||| || ||||||||||||||    
T  39788262 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacatttttgtcccccaaaaatcgtataaaacaaaaaattactcaat 39788163  T
Q  340 gctataaaa 348  Q
     | ||||||    
T  39788162 accataaaa 39788154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 28090547 - 28090654
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||        ||||  |||||||||||||| || ||||||||||||||    
T  28090547 aaactacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 28090645  T
Q  340 gctataaaa 348  Q
      |||||||    
T  28090646 aatataaaa 28090654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 375
Target Start/End: Original strand, 4818167 - 4818302
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||   ||||||||||||| || ||||||||||||||    
T  4818167 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctaaaaaatcgtataaaacaaaaaattactcaat 4818265  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtg 375  Q
    || || |||| |||||||||| ||||| || ||||||    
T  4818266 gccataaaaaatttgtcttgtgttgttctgccttgtg 4818302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 5571671 - 5571776
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||| ||||||||||| ||| |||||| |||||||       |||| ||||||||||||||| || ||||||||||||||    
T  5571671 aaaccacaacacaactttttgtccaacgtacaagttgtctaaaataccaaaatag---cattgtcccccaaaaatcgtataaaacaaaaaattactcaat 5571767  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  5571768 gccataaaa 5571776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 40182533 - 40182393
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||| ||||||||| ||| |||||| |||||||       |||   |||||||||||||| || ||||||||||||||    
T  40182533 aaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatag-cattttgtctctcaaaaatcgtataaaacaaaaaattactcaat 40182435  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||  ||||||| |||||| ||||    
T  40182434 gccataaaaaatttgtcatgtgctgttttgccttgtgttgta 40182393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 3735426 - 3735312
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  3735426 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtcctccaaaaatcgtataaaacaaaaaattattcaat 3735328  T
Q  340 gctataaaagtttgtc 355  Q
    |  |||||| ||||||    
T  3735327 gtcataaaaatttgtc 3735312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 7523241 - 7523187
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  7523241 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 7523187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 17031217 - 17031134
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaatta 333  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||       |||||| ||||||| |||||||||||||||||    
T  17031217 cacaacttttcgtcccacgtacaagttatttaaaatacaaaaatag-ctttttgtccacaaaaaatcatataagaccaaaaatta 17031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 31770618 - 31770725
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||| ||||| || ||||||||||||||    
T  31770618 aaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaat 31770716  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  31770717 gccataaaa 31770725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 32528784 - 32528677
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| |||||    
T  32528784 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 32528686  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  32528685 gccataaaa 32528677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 32313846 - 32313773
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    ||||| |||||||||||||||| ||||||||| ||||| ||||| || |||||| ||| ||||| |||||||||    
T  32313846 gtccagcaaaaatcgtataagatcaaaaattaatcaatactatacaaatttgtcatgtgttgttctgtcttgtg 32313773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 365
Target Start/End: Original strand, 8561009 - 8561132
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||| ||| ||||||||| ||| |||||| ||||||        |||| ||||||||||||||| || |||||||| |||||    
T  8561009 aaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaata-acatttcgtcc-ccaaaaatcgtataaaacaaaaaattaatcaat 8561106  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    || |||||| |||||| ||| |||||    
T  8561107 gccataaaaatttgtcatgttttgtt 8561132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 2351749 - 2351642
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  ||||||||||| || || ||||||||||||||    
T  2351749 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtacaaaacaaaaaattactcaat 2351651  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  2351650 gccataaaa 2351642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 6284325 - 6284433
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatac-aaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    |||| ||| ||||||||||||||||||||||||||| ||  |||||| ||||||||       ||||  |||||||||||||| || |||||||||||||    
T  6284325 aaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaa 6284423  T
Q  339 tgctataaaa 348  Q
    ||| ||||||    
T  6284424 tgccataaaa 6284433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 7208257 - 7208364
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||        |||  |||||||||||||| || ||||||||||||||    
T  7208257 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgttcc-tcaaaaatcgtataaaacaaaaaattactcaat 7208355  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  7208356 gccataaaa 7208364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 365
Target Start/End: Complemental strand, 31644515 - 31644391
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       |||| | ||||||| ||||| ||  ||||||| |||||    
T  31644515 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccctaaaaatcatataaaacataaaattattcaat 31644417  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    |  |||||| |||||||||| |||||    
T  31644416 gtcataaaaatttgtcttgtgttgtt 31644391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 39918576 - 39918469
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| ||||||        |||| ||||||||||||||| ||  |||||||||||||    
T  39918576 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacataaaattactcaat 39918478  T
Q  340 gctataaaa 348  Q
     ||||||||    
T  39918477 actataaaa 39918469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 21739188 - 21739242
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  21739188 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 21739242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 29241447 - 29241340
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||||||||||||  || |||||  |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  29241447 aaaccacagcacaactttttgtcccacgtacaagttggctaaaatatcaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaat 29241349  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  29241348 gccataaaa 29241340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 32093008 - 32093062
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||||||||||||| |||||| |||||| |||||||    
T  32093008 aaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatag 32093062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 34794956 - 34794902
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||||||||||||||||||||||||| ||||| ||| |||||| |||||||    
T  34794956 aaaccacatcacaactttttgtcccacgtataagttgtctaaaataccaaaatag 34794902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 553466 - 553413
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  553466 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata 553413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 700628 - 700681
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||||||||||| |||||||||||||||| |||||| ||||||    
T  700628 aaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaata 700681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 4689725 - 4689778
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||||||||||||||||||||||||  || |||||||||||||    
T  4689725 aaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaata 4689778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 7770306 - 7770359
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||||||||||||||||||||||||  || |||||||||||||    
T  7770306 aaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaata 7770359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 24036299 - 24036246
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||||||||||||||| ||||||||||||||| ||| |||||| ||||||    
T  24036299 aaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaata 24036246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 31880103 - 31880243
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||| ||||||| ||||||||||| ||| |||||| |||||||       |||| |||| |||||||||| || |||||||| |||||    
T  31880103 aaaccacatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaacaatcgtataatacaaaaaattattcaat 31880201  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    |  || |||| |||||| |||| |||| || |||||| ||||    
T  31880202 gtcataaaaaatttgtcatgtactgttctgccttgtgttgta 31880243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 11963410 - 11963356
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||||||||| |||||| ||| |||||| |||||||    
T  11963410 aaaccacagcacaactttttgtcccacgtgcaagttgtctaaaataccaaaatag 11963356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 40489397 - 40489299
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||||||| |||||||| ||| |||||| ||||||        ||||  ||||||| |||||| || |||||||||||||||| ||||||    
T  40489397 cacaactttttgtcccacatacaagttgtctaaaataccaaaata-acattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaa 40489299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 8136906 - 8136853
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||| ||||||||||| ||| |||||| ||||||    
T  8136906 aaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaaaata 8136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 23091398 - 23091471
Alignment:
Q  308 caaaaatcgtataagaccaaaaattactcaatgctataa-aagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    |||||||||||||| || ||| |||||||||||| |||| || |||||||||| ||||| | ||||||| ||||    
T  23091398 caaaaatcgtataaaacaaaacattactcaatgccataagaaatttgtcttgtgttgttctatcttgtgttgta 23091471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 12563 - 12670
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  12563 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 12661  T
Q  340 gctataaaa 348  Q
    |||||||||    
T  12662 gctataaaa 12670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 18081 - 18188
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  18081 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 18179  T
Q  340 gctataaaa 348  Q
    |||||||||    
T  18180 gctataaaa 18188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 16386932 - 16386825
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  16386932 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 16386834  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  16386833 gccataaaa 16386825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 844820 - 844927
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  844820 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 844918  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  844919 gccataaaa 844927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 375
Target Start/End: Complemental strand, 1601251 - 1601116
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| |||||||       ||||||||||||||||| || || |||||||||||| |    
T  1601251 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcatttt-gtccaccaaaaatcgtacaaaacaaaaaattactcatt 1601153  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtg 375  Q
    || || |||| |||||||||| ||||| || ||||||    
T  1601152 gccataaaaaatttgtcttgtgttgttctgccttgtg 1601116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 375
Target Start/End: Complemental strand, 4895407 - 4895337
Alignment:
Q  305 caccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    |||||||||||||||||||| |||| ||| ||||| ||||||| |||||| |||| |||||||||||||||    
T  4895407 caccaaaaatcgtataagactaaaacttattcaatactataaacgtttgtattgtgttgttttgtcttgtg 4895337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 16437440 - 16437321
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  16437440 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatttt-gtccttcaaaaatcgtataaaacaaaaaattactcaat 16437342  T
Q  340 gctataaaagtttgtcttgta 360  Q
    || |||||| |||||| ||||    
T  16437341 gccataaaaatttgtcctgta 16437321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 31004210 - 31004096
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       |||| ||||||||| ||||| || |||||||| |||||    
T  31004210 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-tatttcgtcccccaaaaatcctataaaacaaaaaattattcaat 31004112  T
Q  340 gctataaaagtttgtc 355  Q
    || |||||| ||||||    
T  31004111 gccataaaaatttgtc 31004096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 382
Target Start/End: Original strand, 45490971 - 45491113
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  45490971 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 45491069  T
Q  340 gctata-aaagtttgtcttgtattgttttgtcttgtgatgtatt 382  Q
    || ||| ||| |||||| |||  |||| || |||||| ||||||    
T  45491070 gccatacaaaatttgtcatgtgctgttctgccttgtgttgtatt 45491113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 6711142 - 6711282
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||| ||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  6711142 aaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 6711240  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| ||||||||||  |||| || |||||| ||||    
T  6711241 gccataaaaaatttgtcttgtgctgttctgccttgtgttgta 6711282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 7183996 - 7183856
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||| ||||||||||| ||| |||||| || ||||       |||   |||||||||||||| || ||||||||||||||    
T  7183996 aaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaatatagtatttt-gtctctcaaaaatcgtataaaacaaaaaattactcaat 7183898  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| ||||||||| ||||||||| ||||    
T  7183897 gccataaaaaatttgtcctgtattgttctgtcttgtgttgta 7183856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 12890316 - 12890209
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| | |||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  12890316 aaaccacagcacaactttttgtcccacgtacaagttgtctaagataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 12890218  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  12890217 gccataaaa 12890209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 16451205 - 16451098
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  16451205 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 16451107  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  16451106 gccataaaa 16451098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 382
Target Start/End: Complemental strand, 17888026 - 17887883
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||          || ||||||||||||||| || | ||||||||||||    
T  17888026 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccccccaaaaatcgtataaaacaacaaattactcaat 17887927  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgtatt 382  Q
    || || |||| |||||| ||| ||||| || |||||| ||||||    
T  17887926 gccataaaaaatttgtcatgtgttgttctgccttgtgttgtatt 17887883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 28340399 - 28340506
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  28340399 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 28340497  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  28340498 gccataaaa 28340506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 42510603 - 42510496
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| |||||    
T  42510603 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 42510505  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  42510504 gccataaaa 42510496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 50540422 - 50540315
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||       |||| ||||||||| ||||| || | ||||||||||||    
T  50540422 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaaaaatcatataaaacaacaaattactcaat 50540324  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  50540323 gccataaaa 50540315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 25539933 - 25539819
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| | |||||||| |||||||       |||| ||||||||||||||| || |||||||| ||||     
T  25539933 aaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatag-catttcgtcccccaaaaatcgtataaaacaaaaaattattcaaa 25539835  T
Q  340 gctataaaagtttgtc 355  Q
    || |||||| ||||||    
T  25539834 gccataaaaatttgtc 25539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 30798848 - 30798920
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgt 374  Q
    |||||||||||||||||||||||||||||||| |||||   |||||| |||||  | ||||||| ||||||||    
T  30798848 gtccaccaaaaatcgtataagaccaaaaattattcaatatcataaaattttgttatatattgttctgtcttgt 30798920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 46447744 - 46447688
Alignment:
Q  238 ttaaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||  |||||||    
T  46447744 ttaaattacatcacaactttttgttccacgtacaagttatctaaaatatcaaaatag 46447688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 35387407 - 35387514
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||| ||||||||||||| ||| |||||| |||||||        |||  |||||||||||||| || ||||||||||||||    
T  35387407 aaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcatttta-tccctcaaaaatcgtataaaacaaaaaattactcaat 35387505  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  35387506 gccataaaa 35387514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 44738138 - 44738244
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||  |||||||        | |  |||||||||||||| || ||||||||||||||    
T  44738138 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaatagcaaaatagttttta--ttcctcaaaaatcgtataaaacaaaaaattactcaat 44738235  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  44738236 gccataaaa 44738244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 1351531 - 1351585
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  1351531 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 1351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 24339735 - 24339840
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||| ||||||||||||||| ||| |||||| |||||||       |||| ||||| ||||||||| || |||||||| |||||    
T  24339735 aaaccacaacacaactttttttcccacgtacaagttgtctaaaataccaaaatag---cattgtcccccaaacatcgtataaaacaaaaaattattcaat 24339831  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  24339832 gccataaaa 24339840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 30105788 - 30105883
Alignment:
Q  252 aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||| ||||| ||||||    
T  30105788 aactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattacttaatgccataaaa 30105883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 51264573 - 51264466
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| | | |||||| |||||||       ||||   ||||||||||||| || ||||||||||||||    
T  51264573 aaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatag-cattttgtcctttaaaaatcgtataaaacaaaaaattactcaat 51264475  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  51264474 gccataaaa 51264466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 16476260 - 16476305
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  16476260 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 16476305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 26118320 - 26118418
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||| ||||||| ||||||    
T  26118320 cacaactttttgtcccacgtaaaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa 26118418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 355
Target Start/End: Complemental strand, 45658899 - 45658785
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| | |||||||| |||||||       |||| ||||||||| ||||| || |||||||| ||||     
T  45658899 aaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatag-catttcgtcccccaaaaatcatataaaacaaaaaattattcaaa 45658801  T
Q  340 gctataaaagtttgtc 355  Q
    || |||||| ||||||    
T  45658800 gccataaaaatttgtc 45658785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 46154978 - 46154925
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||||| ||||||    
T  46154978 aaactacagcacaactttttgtcccacttacaagttgtctaaaataccaaaata 46154925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 50382499 - 50382552
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| |||||||||    
T  50382499 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaata 50382552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 26764900 - 26764944
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  26764900 cacaactttttgtcccacgtacaagttgtctaaaataccaaaata 26764944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 365
Target Start/End: Complemental strand, 38663210 - 38663086
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  ||||||        ||||  |||||||||||||| || |||||||| |||||    
T  38663210 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 38663112  T
Q  340 gctataaaagtttgtcttgtattgtt 365  Q
    |  |||||| |||||| ||| |||||    
T  38663111 gtcataaaaatttgtcctgtgttgtt 38663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 364
Target Start/End: Original strand, 2761651 - 2761774
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    ||||| ||| ||||| |||||||| || |||||| |||||| ||||||||||||||       ||| || ||||||| ||||| ||||||||||| ||||    
T  2761651 taaaccacaacacaattttttgtctcaagtacaaattatctaaaatacaaaaatagattttt-gtcaac-aaaaatcatataaaaccaaaaattattcaa 2761748  T
Q  339 tgctataaaagtttgtcttgtattgt 364  Q
    | |||||||||| |||| ||| ||||    
T  2761749 tactataaaagtctgtcatgtgttgt 2761774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 4895375 - 4895337
Alignment:
Q  386 aataccataaaagtttgtattgtgttgttttgtcttgtg 424  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  4895375 aatactataaacgtttgtattgtgttgttttgtcttgtg 4895337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 41967945 - 41967999
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  41967945 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 41967999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 375
Target Start/End: Original strand, 51703327 - 51703393
Alignment:
Q  310 aaaatcgtataagaccaaaaattactcaatgctat-aaaagtttgtcttgtattgttttgtcttgtg 375  Q
    ||||| |||||| || |||||||||||||||| || |||| |||||| |||||||||||| ||||||    
T  51703327 aaaatggtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgttttgccttgtg 51703393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 6029397 - 6029450
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| || ||||||    
T  6029397 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 6029450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 10384446 - 10384406
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatct 279  Q
    ||||| ||| |||||||||||||||||||||||| ||||||    
T  10384446 taaaccacagcacaactttttgtcccacgtacaaattatct 10384406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 16643287 - 16643331
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||||||||||||||||| |||| ||| ||| |||||||||||||    
T  16643287 cacaactttttgtcccacatacaggttgtctaaaatacaaaaata 16643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 38087091 - 38087127
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagtt 275  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  38087091 taaaccacatcacaactttttgtcccaagtacaagtt 38087127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 51703268 - 51703312
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||||||||||||||||| |||| ||| ||| |||||||||||||    
T  51703268 cacaactttttgtcccacctacatgttgtctaaaatacaaaaata 51703312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 32497984 - 32497877
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || ||||||||||||||    
T  32497984 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccttcaaaaatcgtataaaacaaaaaattactcaat 32497886  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  32497885 gccataaaa 32497877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 375
Target Start/End: Complemental strand, 11114941 - 11114807
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||| ||||||| ||| |||| | |||||||       |||| | || |||||||||| || |||||||| |||||    
T  11114941 aaaccacatcacaactttttgtcccacgcacaagttgtctaaaattccaaaatag-tatttcgtccgctaacaatcgtataaaacgaaaaattattcaat 11114843  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    || |||||| ||| |||| ||||||| |||||||||    
T  11114842 gccataaaaatttttcttatattgttctgtcttgtg 11114807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 375
Target Start/End: Original strand, 16177904 - 16178036
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| ||||| |       |||| ||||||||||||||| ||  ||||||| |||||    
T  16177904 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaat-ggaatttcgtcccccaaaaatcgtataaaac--aaaattattcaat 16178000  T
Q  340 gctataaaagtttgtcttgtattgttttgtcttgtg 375  Q
    ||||||||| |||||| ||| ||||| | |||||||    
T  16178001 gctataaaaatttgtcgtgtgttgttctatcttgtg 16178036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 17540784 - 17540676
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaata-caaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||||| |||||||||       ||||  |||||||||||||| || |||||||||||||    
T  17540784 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 17540686  T
Q  339 tgctataaaa 348  Q
    ||| ||||||    
T  17540685 tgccataaaa 17540676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 5278855 - 5278962
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||| ||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  5278855 aaaccacagcacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccttcaaaaatcgtataaaacaaaaaattactcaat 5278953  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  5278954 gccataaaa 5278962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 30798510 - 30798564
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  30798510 aaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatag 30798564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 34338879 - 34338772
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||| ||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  34338879 aaaccacagcacaactttttgtcccacgcacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 34338781  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  34338780 gccataaaa 34338772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 38993092 - 38993146
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  38993092 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatag 38993146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 33889312 - 33889259
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  33889312 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 33889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 2645107 - 2645214
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| |||||||        |||  |||||||||||||| || ||||||||||||||    
T  2645107 aaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcc-tcaaaaatcgtataaaacaaaaaattactcaat 2645205  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  2645206 gccataaaa 2645214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 7258966 - 7258858
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| ||||||        ||||  ||||||| |||||| || ||||||||||||||    
T  7258966 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacatttttgtccctcaaaaattgtataaaacaaaaaattactcaat 7258867  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  7258866 gccataaaa 7258858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 44284699 - 44284591
Alignment:
Q  239 taaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa 338  Q
    ||||| ||| |||||||||||||| |||||||||||| ||| |||||  |||||||       ||||  |||||||||||||| || |||||||||||||    
T  44284699 taaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaa 44284601  T
Q  339 tgctataaaa 348  Q
    ||| ||||||    
T  44284600 tgccataaaa 44284591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 7761594 - 7761693
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  7761594 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 7761692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 9717293 - 9717239
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  9717293 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 9717239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 9732951 - 9733058
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       ||||  |||||||||||||| || |||||||| |||||    
T  9732951 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 9733049  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  9733050 gccataaaa 9733058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 16104343 - 16104236
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| ||||||||| || ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  16104343 aaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaat 16104245  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  16104244 gccataaaa 16104236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 19513710 - 19513764
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  19513710 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 19513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 30326352 - 30326459
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  30326352 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 30326450  T
Q  340 gctataaaa 348  Q
     | ||||||    
T  30326451 tccataaaa 30326459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 35114854 - 35114747
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||| ||||||||||||||||||||| ||| |||||| |||||||       ||||  |||||||||||||| || |||||||||||| |    
T  35114854 aaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcatt 35114756  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  35114755 gccataaaa 35114747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 382
Target Start/End: Complemental strand, 42706428 - 42706285
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagac-caaaaattactcaa 338  Q
    |||| ||| |||||||||||||||||| |||||||| ||| |||||| |||||||       ||||  |||||||||||||| ||  |||||||||||||    
T  42706428 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaaattactcaa 42706330  T
Q  339 tgctat-aaaagtttgtcttgtattgttttgtcttgtgatgtatt 382  Q
    ||| || |||| |||||| |||  |||| ||||||||| ||||||    
T  42706329 tgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtatt 42706285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 26418992 - 26418939
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||    
T  26418992 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 26418939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 13829502 - 13829454
Alignment:
Q  245 acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||||    
T  13829502 acatcacaactttttgtcccaggtacaagttatctaaaacaccaaaata 13829454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 18685905 - 18685765
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  ||||||        ||||  |||||||| ||||| || ||||||||||||||    
T  18685905 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatattaaaata-acattttgtccctcaaaaatcctataaaacaaaaaattactcaat 18685807  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgtgatgta 380  Q
    || || |||| |||||| |||  |||| ||||||||| ||||    
T  18685806 gccataaaaaatttgtcctgtgctgttctgtcttgtgttgta 18685765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 348
Target Start/End: Original strand, 3913481 - 3913588
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||| ||||||||||||| ||| |||||| |||||||        ||| ||||||||||||||| || ||| |||| |||||    
T  3913481 aaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgctcc-ccaaaaatcgtataaaacaaaatattattcaat 3913579  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  3913580 gccataaaa 3913588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 32766587 - 32766650
Alignment:
Q  302 gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgtt 365  Q
    |||| ||||||||||||||| || |||||||| ||||||| |||||| |||||| ||| |||||    
T  32766587 gtcctccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgtt 32766650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 6896237 - 6896183
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| || |||||||    
T  6896237 aaacaacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 6896183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 37308724 - 37308670
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| |||||||||||||||||||||||| || ||| |||||| |||||||    
T  37308724 aaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaatag 37308670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 1247158 - 1247105
Alignment:
Q  307 ccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgta 360  Q
    ||||||||||||||| |  |||||||| ||||||| |||||| |||||||||||    
T  1247158 ccaaaaatcgtataaaataaaaaattattcaatgccataaaaatttgtcttgta 1247105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 37003889 - 37003942
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| ||| |||||||||||||||||||||||| || ||| |||||| ||||||    
T  37003889 aaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaata 37003942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 1247207 - 1247171
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaata 285  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  1247207 cacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 4641518 - 4641478
Alignment:
Q  308 caaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    |||||||||||||| || ||||||||||||||| |||||||    
T  4641518 caaaaatcgtataaaacaaaaaattactcaatggtataaaa 4641478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 7503 - 7610
Alignment:
Q  255 tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgt 354  Q
    |||||||| ||||||| |||| ||| |||||| |||||||       |||||  ||||||  ||||||||||||||||| ||||| ||||||||||||||    
T  7503 tttttgtctcacgtacgagttgtctaaaataccaaaatagattttttgtccattaaaaattatataagaccaaaaattattcaatactataaaagtttgt 7602  T
Q  355 cttgtatt 362  Q
    ||||||||    
T  7603 cttgtatt 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 102018 - 101911
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||       ||||   ||||||||||||| || ||||||||||||||    
T  102018 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctaaaaaatcgtataaaacaaaaaattactcaat 101920  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  101919 gccataaaa 101911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 23644 - 23539
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || ||||||||||||||    
T  23644 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata---acattgtccctcaaaaatcgtataaaacaaaaaattactcaat 23548  T
Q  340 gctataaaa 348  Q
    || ||||||    
T  23547 gccataaaa 23539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 19126 - 19224
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  19126 cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 19224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 373000 - 373098
Alignment:
Q  249 cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa 348  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||        ||||  |||||||||||||| || |||||||||||||||| ||||||    
T  373000 cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-tcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa 373098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 374
Target Start/End: Complemental strand, 51508 - 51374
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||  |||||||       ||||  |||||||||||||| || ||||||||||||||    
T  51508 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 51410  T
Q  340 gctat-aaaagtttgtcttgtattgttttgtcttgt 374  Q
    |  || |||| ||||||||||  |||| ||||||||    
T  51409 gtcataaaaaatttgtcttgtgctgttctgtcttgt 51374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 2365 - 2419
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  2365 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 2419  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 347
Target Start/End: Complemental strand, 15241 - 15135
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaat 339  Q
    |||| ||| |||||||||||||| |||||||||||| ||| |||||| |||||||       |||| ||||||||| ||||| || | ||||||||||||    
T  15241 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatag-tattttgtcccccaaaaatcttataaaacaacaaattactcaat 15143  T
Q  340 gctataaa 347  Q
    || |||||    
T  15142 gccataaa 15135  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 5467 - 5520
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata 293  Q
    |||| |||||||||||||||||||||| ||||||||  || |||||||||||||    
T  5467 aaaccacatcacaactttttgtcccacatacaagttgcctaaaatacaaaaata 5520  T

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Target: scaffold0650 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 1670 - 1724
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| || |||||||    
T  1670 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatag 1724  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 15408 - 15462
Alignment:
Q  240 aaactacatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag 294  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| |||||| |||||||    
T  15408 aaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatag 15462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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