View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1545_low_2 (Length: 873)

Name: NF1545_low_2
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1545_low_2
NF1545_low_2
[»] chr6 (15 HSPs)
chr6 (533-869)||(27648425-27648760)
chr6 (533-851)||(27708610-27708927)
chr6 (533-851)||(27728436-27728753)
chr6 (676-829)||(27597646-27597799)
chr6 (242-316)||(27708201-27708275)
chr6 (242-316)||(27728027-27728101)
chr6 (198-280)||(27694308-27694390)
chr6 (199-280)||(27616182-27616263)
chr6 (47-164)||(27708014-27708131)
chr6 (47-164)||(27727840-27727957)
chr6 (218-280)||(27596239-27596301)
chr6 (169-210)||(27708159-27708200)
chr6 (169-210)||(27727985-27728026)
chr6 (397-501)||(27708495-27708595)
chr6 (397-501)||(27728321-27728421)
[»] scaffold0349 (5 HSPs)
scaffold0349 (533-851)||(7015-7332)
scaffold0349 (242-316)||(6606-6680)
scaffold0349 (47-164)||(6419-6536)
scaffold0349 (169-210)||(6564-6605)
scaffold0349 (397-501)||(6900-7000)
[»] chr8 (2 HSPs)
chr8 (198-280)||(29263737-29263819)
chr8 (178-235)||(24855563-24855619)
[»] chr2 (1 HSPs)
chr2 (178-237)||(20547124-20547182)
[»] chr7 (2 HSPs)
chr7 (198-236)||(6894364-6894402)
chr7 (116-162)||(26741773-26741819)
[»] chr5 (2 HSPs)
chr5 (199-237)||(3147193-3147231)
chr5 (118-161)||(32704479-32704522)
[»] chr1 (1 HSPs)
chr1 (198-235)||(32029796-32029833)


Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 533 - 869
Target Start/End: Original strand, 27648425 - 27648760
Alignment:
Q  533 tacttacattgccagtacaaagttctgccaaagatgcatccaagggaccagatatcaatcttcttgtcatatgaaatcccgagaataagctcaggagcac 632  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27648425 tacttacattgccggtacaaagttctgccaa-gatgcatccaagggaccagatatcaatcttcttgtcatatgaaagcccgagaataacctcaggagcac 27648523  T
Q  633 gataggacctggactgaacatatgagcaaaggtgatctgtctcaaaacaactacctccaagatgaatgaccttcacctcacatcggctgtagcttttaac 732  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||||    
T  27648524 gataggacctcgactgaacatatgagcaaaggtgatctgtctcaaaacaactacttccaagatcaatgaccttcacctcacatcggtcgtagcttttaac 27648623  T
Q  733 caaaatattctccggcttcaagtaacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaagatttaatggtaattgactgcaataacaaa 832  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  27648624 caaaatattctccggcttcaagtcgcaatgtgttagtccaaggttatgtaagtactgaagtgcttccaaacattgaatggtaattgattgcaataacaaa 27648723  T
Q  833 tcaagacaagtttctaatgagacaatagtataatcta 869  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  27648724 tcaagacaagtttctaatgagacagtagtagaatcta 27648760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 533 - 851
Target Start/End: Original strand, 27708610 - 27708927
Alignment:
Q  533 tacttacattgccagtacaaagttctgccaaagatgcatccaagggaccagatatcaatcttcttgtcatatgaaatcccgagaataagctcaggagcac 632  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  27708610 tacttacattgccagtacaaagttctgccaa-gatgcatccaagggaccagatatcaatcttcttgtcgtatgaaagcccgagaataacctcgggagcac 27708708  T
Q  633 gataggacctggactgaacatatgagcaaaggtgatctgtctcaaaacaactacctccaagatgaatgaccttcacctcacatcggctgtagcttttaac 732  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27708709 tataggacctagactgaacatatgagcaaaggtgatctgtctcaaaacaactacttccaagatcaatgaccttcacctcacatcggctgtagcttttaac 27708808  T
Q  733 caaaatattctccggcttcaagtaacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaagatttaatggtaattgactgcaataacaaa 832  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  27708809 caaaatattctccggcttcaagtcacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaacattgaatggtaattgactgcaaaaacaaa 27708908  T
Q  833 tcaagacaagtttctaatg 851  Q
    ||||||||||||| |||||    
T  27708909 tcaagacaagtttataatg 27708927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 533 - 851
Target Start/End: Original strand, 27728436 - 27728753
Alignment:
Q  533 tacttacattgccagtacaaagttctgccaaagatgcatccaagggaccagatatcaatcttcttgtcatatgaaatcccgagaataagctcaggagcac 632  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  27728436 tacttacattgccagtacaaagttctgccaa-gatgcatccaagggaccagatatcaatcttcttgtcgtatgaaagcccgagaataacctcgggagcac 27728534  T
Q  633 gataggacctggactgaacatatgagcaaaggtgatctgtctcaaaacaactacctccaagatgaatgaccttcacctcacatcggctgtagcttttaac 732  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27728535 tataggacctagactgaacatatgagcaaaggtgatctgtctcaaaacaactacttccaagatcaatgaccttcacctcacatcggctgtagcttttaac 27728634  T
Q  733 caaaatattctccggcttcaagtaacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaagatttaatggtaattgactgcaataacaaa 832  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  27728635 caaaatattctccggcttcaagtcacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaacattgaatggtaattgactgcaaaaacaaa 27728734  T
Q  833 tcaagacaagtttctaatg 851  Q
    ||||||||||||| |||||    
T  27728735 tcaagacaagtttataatg 27728753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 676 - 829
Target Start/End: Original strand, 27597646 - 27597799
Alignment:
Q  676 aaaacaactacctccaagatgaatgaccttcacctcacatcggctgtagcttttaaccaaaatattctccggcttcaagtaacaatgtattagtccaagg 775  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27597646 aaaacaactacttccaagatcaatgaccttcacctcacatcggctgtagcttttaaccaaaatattctccggcttcaagtcacaatgtattagtccaagg 27597745  T
Q  776 ttatgtaaatactgaagtgcttccaaagatttaatggtaattgactgcaataac 829  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  27597746 ttatgtaaatactgaagtgcttcctaatattgaatggtaattgactgcaataac 27597799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 27708201 - 27708275
Alignment:
Q  242 atcattttcacatgtaaaatacacttcatcagtttatttaagtggaacaaaaatggaatgaaatgggacagcttg 316  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  27708201 atcattttcacatgtaaaatacacttcatcagttcatttgagtggaacacaaatggaatgaaatgggacagcttg 27708275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 27728027 - 27728101
Alignment:
Q  242 atcattttcacatgtaaaatacacttcatcagtttatttaagtggaacaaaaatggaatgaaatgggacagcttg 316  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  27728027 atcattttcacatgtaaaatacacttcatcagttcatttgagtggaacacaaatggaatgaaatgggacagcttg 27728101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 27694308 - 27694390
Alignment:
Q  198 gttcaaattccactacgctatagccgctatttaacaacacccaaatcattttcacatgtaaaatacacttcatcagtttattt 280  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  27694308 gttcaaattctgctacgttatagccgctatttaacaacacccaaatcattttcaaatttaaaatatacttcatcagtttattt 27694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 27616182 - 27616263
Alignment:
Q  199 ttcaaattccactacgctatagccgctatttaacaacacccaaatcattttcacatgtaaaatacacttcatcagtttattt 280  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||| || |||||||||    
T  27616182 ttcaaattccgctacgttatagccgctatttaacaacacccaaatcattttcaaatttaaaatatactttattagtttattt 27616263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 27708014 - 27708131
Alignment:
Q  47 aatagattaagacaacatgttctgttctactttaaatatagttccactacagctacaaagaaactaactagtgttgtcaatcgtggacagcagaaaacag 146  Q
    |||||||||||| ||||||| |||||||||| |  |||||||||||||| | | ||| ||||||||||| || ||  ||||| | || ||||||||| ||    
T  27708014 aatagattaagataacatgtcctgttctactgtccatatagttccactaaaacaacacagaaactaacttgttttcccaatcatagatagcagaaaatag 27708113  T
Q  147 tggtttgttcaaattctg 164  Q
    ||||||||||||||||||    
T  27708114 tggtttgttcaaattctg 27708131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 27727840 - 27727957
Alignment:
Q  47 aatagattaagacaacatgttctgttctactttaaatatagttccactacagctacaaagaaactaactagtgttgtcaatcgtggacagcagaaaacag 146  Q
    |||||||||||| ||||||| |||||||||| |  |||||||||||||| | | ||| ||||||||||| || ||  ||||| | || ||||||||| ||    
T  27727840 aatagattaagataacatgtcctgttctactgtccatatagttccactaaaacaacacagaaactaacttgttttcccaatcatagatagcagaaaatag 27727939  T
Q  147 tggtttgttcaaattctg 164  Q
    ||||||||||||||||||    
T  27727940 tggtttgttcaaattctg 27727957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 27596239 - 27596301
Alignment:
Q  218 tagccgctatttaacaacacccaaatcattttcacatgtaaaatacacttcatcagtttattt 280  Q
    ||||| |||||||||||||||||||||||||||| || ||||||| |||| ||||||| ||||    
T  27596239 tagccactatttaacaacacccaaatcattttcaaatttaaaatatacttaatcagttaattt 27596301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 27708159 - 27708200
Alignment:
Q  169 cagcgataatgcagaacaatggtgatttcgttcaaattccac 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  27708159 cagcgataatgcataacaatggtgatttcgttcaaattccac 27708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 27727985 - 27728026
Alignment:
Q  169 cagcgataatgcagaacaatggtgatttcgttcaaattccac 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  27727985 cagcgataatgcataacaatggtgatttcgttcaaattccac 27728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 27708495 - 27708595
Alignment:
Q  397 tttcaggctaaattagacctgatgcattagagaggaaaactagagca-ttttatctacctcgagcacgaaatttgacatgaatgaatcttaacatgttta 495  Q
    |||||| ||||||||||||| ||| |||||||| ||||||| ||||| |||||| |||||| | |||| ||||||||    ||||||||||||||| |||    
T  27708495 tttcagtctaaattagacctaatgtattagagaagaaaacttgagcatttttatgtacctccaacacg-aatttgac----atgaatcttaacatgctta 27708589  T
Q  496 agtttg 501  Q
    ||||||    
T  27708590 agtttg 27708595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 27728321 - 27728421
Alignment:
Q  397 tttcaggctaaattagacctgatgcattagagaggaaaactagagca-ttttatctacctcgagcacgaaatttgacatgaatgaatcttaacatgttta 495  Q
    |||||| ||||||||||||| ||| |||||||| ||||||| ||||| |||||| |||||| | |||| ||||||||    ||||||||||||||| |||    
T  27728321 tttcagtctaaattagacctaatgtattagagaagaaaacttgagcatttttatgtacctccaacacg-aatttgac----atgaatcttaacatgctta 27728415  T
Q  496 agtttg 501  Q
    ||||||    
T  27728416 agtttg 27728421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 259; Significance: 1e-144; HSPs: 5)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 533 - 851
Target Start/End: Original strand, 7015 - 7332
Alignment:
Q  533 tacttacattgccagtacaaagttctgccaaagatgcatccaagggaccagatatcaatcttcttgtcatatgaaatcccgagaataagctcaggagcac 632  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  7015 tacttacattgccagtacaaagttctgccaa-gatgcatccaagggaccagatatcaatcttcttgtcgtatgaaagcccgagaataacctcgggagcac 7113  T
Q  633 gataggacctggactgaacatatgagcaaaggtgatctgtctcaaaacaactacctccaagatgaatgaccttcacctcacatcggctgtagcttttaac 732  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  7114 aataggacctagactgaacatatgagcaaaggtgatctgtctcaaaacaactacttccaagatcaatgaccttcacctcacatcggctgtagcttttaac 7213  T
Q  733 caaaatattctccggcttcaagtaacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaagatttaatggtaattgactgcaataacaaa 832  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  7214 caaaatattctccggcttcaagtcacaatgtattagtccaaggttatgtaaatactgaagtgcttccaaacattgaatggtaattgactgcaaaaacaaa 7313  T
Q  833 tcaagacaagtttctaatg 851  Q
    ||||||||||||| |||||    
T  7314 tcaagacaagtttataatg 7332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 6606 - 6680
Alignment:
Q  242 atcattttcacatgtaaaatacacttcatcagtttatttaagtggaacaaaaatggaatgaaatgggacagcttg 316  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  6606 atcattttcacatgtaaaatacacttcatcagttcatttgagtggaacacaaatggaatgaaatgggacagcttg 6680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 6419 - 6536
Alignment:
Q  47 aatagattaagacaacatgttctgttctactttaaatatagttccactacagctacaaagaaactaactagtgttgtcaatcgtggacagcagaaaacag 146  Q
    |||||||||||| ||||||| |||||||||| |  |||||||||||||| | | ||| ||||||||||| || ||  ||||| | || ||||||||| ||    
T  6419 aatagattaagataacatgtcctgttctactgtccatatagttccactaaaacaacacagaaactaacttgttttcccaatcatagatagcagaaaatag 6518  T
Q  147 tggtttgttcaaattctg 164  Q
    ||||||||||||||||||    
T  6519 tggtttgttcaaattctg 6536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 6564 - 6605
Alignment:
Q  169 cagcgataatgcagaacaatggtgatttcgttcaaattccac 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  6564 cagcgataatgcataacaatggtgatttcgttcaaattccac 6605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 6900 - 7000
Alignment:
Q  397 tttcaggctaaattagacctgatgcattagagaggaaaactagagca-ttttatctacctcgagcacgaaatttgacatgaatgaatcttaacatgttta 495  Q
    |||||| ||||||||||||| ||| |||||||| ||||||| ||||| |||||| |||||| | |||| ||||||||    ||||||||||||||| |||    
T  6900 tttcagtctaaattagacctaatgtattagagaagaaaacttgagcatttttatgtacctccaacacg-aatttgac----atgaatcttaacatgctta 6994  T
Q  496 agtttg 501  Q
    ||||||    
T  6995 agtttg 7000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 29263737 - 29263819
Alignment:
Q  198 gttcaaattccactacgctatagccgctatttaacaacacccaaatcattttcacatgtaaaatacacttcatcagtttattt 280  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||||||||    
T  29263737 gttcaaattcagctacgttatagccgctatttaacaacacccaaatcattttcaaaattaaaatatacttcatcagtttattt 29263819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 24855563 - 24855619
Alignment:
Q  178 tgcagaacaatggtgatttcgttcaaattccactacgctatagccgctatttaacaac 235  Q
    ||||||||||| ||||||| ||||||||||| |||||||||  ||||||||| |||||    
T  24855563 tgcagaacaatagtgattt-gttcaaattccgctacgctatgaccgctatttgacaac 24855619  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 20547124 - 20547182
Alignment:
Q  178 tgcagaacaatggtgatttcgttcaaattccactacgctatagccgctatttaacaacac 237  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||    
T  20547124 tgcagaacaatggcgatttc-ttcaaattccacaaccctatagccgctatttaacaacac 20547182  T

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Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 6894364 - 6894402
Alignment:
Q  198 gttcaaattccactacgctatagccgctatttaacaaca 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6894364 gttcaaattccactacgctatagccgctatttaacaaca 6894402  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 26741773 - 26741819
Alignment:
Q  116 agtgttgtcaatcgtggacagcagaaaacagtggtttgttcaaattc 162  Q
    ||||||||||| ||||||  | |||||||||||||||||||||||||    
T  26741773 agtgttgtcaaccgtggatcggagaaaacagtggtttgttcaaattc 26741819  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 3147193 - 3147231
Alignment:
Q  199 ttcaaattccactacgctatagccgctatttaacaacac 237  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  3147193 ttcaaattccactacgctatagccgctatttgacaacac 3147231  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 32704522 - 32704479
Alignment:
Q  118 tgttgtcaatcgtggacagcagaaaacagtggtttgttcaaatt 161  Q
    |||||||||||||||| || |||||| |||||||||||||||||    
T  32704522 tgttgtcaatcgtggatagtagaaaatagtggtttgttcaaatt 32704479  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 32029796 - 32029833
Alignment:
Q  198 gttcaaattccactacgctatagccgctatttaacaac 235  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  32029796 gttcgaattccactacgctatagccgctatttgacaac 32029833  T

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