View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1545_low_37 (Length: 320)
Name: NF1545_low_37
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1545_low_37 |
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Alignment Details
Target: chr6 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 9468353 - 9468655
Alignment:
| Q |
1 |
ataattcaaactcagattctttcattttgaactatttattattaactgaacctcatagacacttgacatctaaaatttgagttgcaaattttacaacgct |
100 |
Q |
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||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |
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| T |
9468353 |
ataattcaaactcagattctttcggttccaactatttattattaactgaaccttatagacacttgacatctaaaatttgagttgcatattttccaacgct |
9468452 |
T |
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| Q |
101 |
cctacctaaattattgtcactaatttcagttttctagtatactttgtaaatagtgctataaagttcccaataagtatcaaaagttagaaatcatagctat |
200 |
Q |
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||| |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
9468453 |
cctctctaaattattctcactaattttagttttctagtatactttgtaaatagtgttataaagttcccaataaatatcaaaagttagaaatcatagctat |
9468552 |
T |
|
| Q |
201 |
aataataggcagcacacctaaatttgagatcttgtcattttatcaggaaaacaaagtttacaaattggcacaatattattcaagacatatccatggaggg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
9468553 |
aataataggcagcacacctaaatttgagatcttgtcattttatcaggaaaacaaagtttacaaattggcacaatattattcaagacatatccatgtaggg |
9468652 |
T |
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| Q |
301 |
ttc |
303 |
Q |
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||| |
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| T |
9468653 |
ttc |
9468655 |
T |
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