View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1545_low_5 (Length: 608)
Name: NF1545_low_5
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1545_low_5 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 485; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 16 - 520
Target Start/End: Original strand, 21151586 - 21152090
Alignment:
| Q |
16 |
aattcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151586 |
aattcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgca |
21151685 |
T |
|
| Q |
116 |
gatcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttg |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151686 |
gatcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttg |
21151785 |
T |
|
| Q |
216 |
gtgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151786 |
gtgcatttcttcttgaggttgtttgtggtaggaggcctataggtcatgtcggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaa |
21151885 |
T |
|
| Q |
316 |
aagaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacat |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151886 |
aagaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatatgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacat |
21151985 |
T |
|
| Q |
416 |
tccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttg |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
21151986 |
tccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcacttagtttatcttcttctg |
21152085 |
T |
|
| Q |
516 |
gttta |
520 |
Q |
| |
|
||||| |
|
|
| T |
21152086 |
gttta |
21152090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 567 - 599
Target Start/End: Original strand, 21152092 - 21152124
Alignment:
| Q |
567 |
cttctgtgtctattgctgaatctgttctctctg |
599 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
21152092 |
cttctgtgtctattgctgaatctgttctctctg |
21152124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 476; Significance: 0; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 16 - 599
Target Start/End: Complemental strand, 22808748 - 22808165
Alignment:
| Q |
16 |
aattcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgca |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22808748 |
aattcatcgagacataaaggctagtaatgtgttgttagattctgaatttaatgctaggttgggagattttggtctttcaaggttgtatgaccatggtgca |
22808649 |
T |
|
| Q |
116 |
gatcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttg |
215 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22808648 |
gatcctcacacaactcatttggttggaactattggttatcttgcccctgagcatattagaacaggtaaggctactaaattttctgatgtgttttcttttg |
22808549 |
T |
|
| Q |
216 |
gtgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22808548 |
gtgcatttcttcttgaggttgtttgtggtcggaggcctataggtcgtgtgggagaaaatgagagtctaattctagttgattatgtgtttgaatgttggaa |
22808449 |
T |
|
| Q |
316 |
aagaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacat |
415 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22808448 |
aagaggtgaaattcttgaggcaaaagatgtatatttaggaacaaattatgtgtctgaagaggttgaattggtgttgaaacttggcttgttgtgtttgcat |
22808349 |
T |
|
| Q |
416 |
tccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttg |
515 |
Q |
| |
|
|| |||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22808348 |
tcagagcctctggttagaccaagtatgagacaagttgtgcagtatttggagagggatatagctttgccagatttgtcttcgcttagtttatcttcttctg |
22808249 |
T |
|
| Q |
516 |
gtttaacttttgggtacaaagaatgtgttgaggacaagacaatgccatatacttctgtgtctattgctgaatctgttctctctg |
599 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22808248 |
gtttaacttttgggtaccaagaatgtgttgaagacaagacaatgccatatacttctgtgtctattgctgagtctgttctctctg |
22808165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 20 - 599
Target Start/End: Complemental strand, 22804460 - 22803881
Alignment:
| Q |
20 |
catagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcagatc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22804460 |
catagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgctgatc |
22804361 |
T |
|
| Q |
120 |
ctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttggtgc |
219 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22804360 |
ctcacactactcatttggttggaacttttggttatcttgctcctgatcatattagaacaggtaaggctactaaattttctgatgtgttttcttttggtgc |
22804261 |
T |
|
| Q |
220 |
atttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaaaga |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
22804260 |
atttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtaggagagaatgagagtctagttctagttgatcatgtgtttgaatgtttgaaaaga |
22804161 |
T |
|
| Q |
320 |
ggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacattccg |
419 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
22804160 |
ggtgaaattcttgaggctaaagatgtatatttaggaacaaattatgtgtctgaagaggtggaattggtgttgaaacttggcttgatgtgttcacattcag |
22804061 |
T |
|
| Q |
420 |
agcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttggttt |
519 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||| | ||| || |
|
|
| T |
22804060 |
agcctttggctagaccaagtatgagacaagttgtgcagtatttggagagggatttacctttaccagatttgtcattgcttagtttatcttcctatggatt |
22803961 |
T |
|
| Q |
520 |
aacttttgggtacaaagaatgtgttgaggacaagacaatgccatatacttctgtgtctattgctgaatctgttctctctg |
599 |
Q |
| |
|
|||||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22803960 |
aacttttgggcaccaagaacttgttgaggacaagacagtgccatatacttctgtgtctattgctgaatctgttctctctg |
22803881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 20 - 599
Target Start/End: Complemental strand, 22839176 - 22838597
Alignment:
| Q |
20 |
catagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcagatc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22839176 |
catagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgctgatc |
22839077 |
T |
|
| Q |
120 |
ctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttggtgc |
219 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22839076 |
ctcacactactcatttggttggaacttttggttatcttgctcctgatcatattagaacaggtaaggctactaaattttctgatgtgttttcttttggtgc |
22838977 |
T |
|
| Q |
220 |
atttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaaaga |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
22838976 |
atttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtaggagaatatgagagtctaattctagttgattgtgtgtttgagtgttggaaaaga |
22838877 |
T |
|
| Q |
320 |
ggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacattccg |
419 |
Q |
| |
|
||||| ||||||||||||||||||| | |||| || ||| | || ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| | |
|
|
| T |
22838876 |
ggtgatattcttgaggcaaaagatgtaaatttggggacagattatgtgtctgaagaggtggagttggtgttgaaacttggattgttgtgttctcattcag |
22838777 |
T |
|
| Q |
420 |
agcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttggttt |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22838776 |
agcctttggctagaccaagtatgaggcaagttgtgcagtatttggagacggatataccctttccagatttgtcttcgcttagtttatctacttttggttt |
22838677 |
T |
|
| Q |
520 |
aacttttgggtacaaagaatgtgttgaggacaagacaatgccatatacttctgtgtctattgctgaatctgttctctctg |
599 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22838676 |
aacttttgggtaccaagaatgtgttgaggacaagacaatgccgtatacttctgtgtctattgctgaatccgttctctctg |
22838597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 17 - 597
Target Start/End: Complemental strand, 22888425 - 22887845
Alignment:
| Q |
17 |
attcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcag |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
22888425 |
attcatagagacataaaggctagtaatgtgttgttagattctggatttaatgctagattgggagattttggtctttcaaggttgcatgatcatggtgctg |
22888326 |
T |
|
| Q |
117 |
atcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttgg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22888325 |
atcctcacacaactcatttggctggaactattggttatcttgctcctgaacatattagaagaggtaaggctactaaattttctgatgtgttttcttttgg |
22888226 |
T |
|
| Q |
217 |
tgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaa |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
22888225 |
tgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtaggagacaatgagagtctaattctagttgattctgtgtttgaatgttggcaa |
22888126 |
T |
|
| Q |
317 |
agaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacatt |
416 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888125 |
agaggtgagattcttgaggcaaaagatgttcatttaggaacaaattatgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacatt |
22888026 |
T |
|
| Q |
417 |
ccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttgg |
516 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
22888025 |
cagagcctttggctagaccaagtatgagacaagttgtacagtatttggagagggatacacctttgccagatttttcttcgcttagtttatcttcttctgg |
22887926 |
T |
|
| Q |
517 |
tttaacttttgggtacaaagaatgtgttgaggacaagacaatgccatatacttctgtgtctattgctgaatctgttctctc |
597 |
Q |
| |
|
|||||||||||||||| || || ||||||||||| || ||||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
22887925 |
tttaacttttgggtaccaattatttgttgaggacaggagaatgccatatacttcagcgttaattgctgaatctgttctctc |
22887845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 17 - 599
Target Start/End: Complemental strand, 22830158 - 22829576
Alignment:
| Q |
17 |
attcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcag |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22830158 |
attcatagagacataaaggctagtaatgtgttgttagattctgaatttaattcaagattgggagattttggtctttcaaggttgtatgatcacggtgcag |
22830059 |
T |
|
| Q |
117 |
atcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttgg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
22830058 |
atcctcacacaactcatttggctggaactattggttatcttgctcctgaacatattagaacaggtaaggctacaaaattttctgatgtgttttcttttgg |
22829959 |
T |
|
| Q |
217 |
tgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaa |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22829958 |
tgcatttcttcttgaggttgtttgtggtaggaggcctctaggccgtgtaggagacaatgagagtctaattctagttgattatgtgtttgaatgttggcaa |
22829859 |
T |
|
| Q |
317 |
agaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacatt |
416 |
Q |
| |
|
|||||||| ||||||||||||||||||| | |||| || || | || |||||||| ||||| || ||||||||||||||||| |||||||||||||||| |
|
|
| T |
22829858 |
agaggtgagattcttgaggcaaaagatgtaaatttgggcactgattatgtgtctgaggaggtcgagttggtgttgaaacttggattgttgtgttcacatt |
22829759 |
T |
|
| Q |
417 |
ccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttgg |
516 |
Q |
| |
|
| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |
|
|
| T |
22829758 |
cagaacctttggctagaccaggtatgagacaagttgtgcagtatttggagagggatatacctttgccatatttgttttcgcttagtttatcttcttctgg |
22829659 |
T |
|
| Q |
517 |
tttaacttttgggtacaaagaatgtgttgaggacaagacaatgccatatacttctgtgtctattgctgaatctgttctctctg |
599 |
Q |
| |
|
|||| |||||||||| ||| || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
22829658 |
tttattttttgggtaccaagtatctgttgaggacaagacaatgccgtatacttctgtatctattgctgagtctgttctctctg |
22829576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 17 - 597
Target Start/End: Complemental strand, 22875055 - 22874475
Alignment:
| Q |
17 |
attcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcag |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
22875055 |
attcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgcatgatcatggtgctg |
22874956 |
T |
|
| Q |
117 |
atcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttgg |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22874955 |
atcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaactggtaaggctactaaattttctgatgtgttttcttttgg |
22874856 |
T |
|
| Q |
217 |
tgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaa |
316 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||| | ||| || || || || || ||||| | ||||||| ||| ||||| ||||||||| |
|
|
| T |
22874855 |
tgcatttcttcttgaggttgcttgtggtagaaggcctattgccaatgtaggggaaaatgaatgtgtaattttggttgattgtgtatttgagtgttggaaa |
22874756 |
T |
|
| Q |
317 |
agaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacatt |
416 |
Q |
| |
|
|||||||| ||||||||||||||||||| | |||| || ||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |
|
|
| T |
22874755 |
agaggtgatattcttgaggcaaaagatgtaaattttgggacaaattatgtgtctgaagaggtggaattggttttgaaacttggattgttgtgttctcatt |
22874656 |
T |
|
| Q |
417 |
ccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttgg |
516 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22874655 |
cagagcctttggctagaccaagcatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttttcttcgcttagtttatcttcttttgg |
22874556 |
T |
|
| Q |
517 |
tttaacttttgggtacaaagaatgtgttgaggacaagacaatgccatatacttctgtgtctattgctgaatctgttctctc |
597 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |
|
|
| T |
22874555 |
tttaacttttgggtaccaagaatgtgttgaggacaagacaatgccgtatacttctgtgtctatttctgaatccgttctctc |
22874475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 16 - 550
Target Start/End: Complemental strand, 22893081 - 22892547
Alignment:
| Q |
16 |
aattcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22893081 |
aattcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgaccatggtgca |
22892982 |
T |
|
| Q |
116 |
gatcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttg |
215 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22892981 |
gatcatcacacgactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaattttctgatgtgttttcttttg |
22892882 |
T |
|
| Q |
216 |
gtgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaa |
315 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| | ||| || || || || ||| ||||| | ||||||| ||| ||||| |||||||| |
|
|
| T |
22892881 |
gtgcatttcttcttgaggttgcttgtggtagaaggcctatttctaatgttggggaaaatgaaagtgtaattttggttgattgtgtatttgagtgttggaa |
22892782 |
T |
|
| Q |
316 |
aagaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacat |
415 |
Q |
| |
|
||||||||| ||||||||||||||||||| | |||| || ||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
22892781 |
aagaggtgatattcttgaggcaaaagatgtaaatttggggacaaactttgtgtctgaagaggtggagttggtgttgaaacttggattgttgtgttcacat |
22892682 |
T |
|
| Q |
416 |
tccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttg |
515 |
Q |
| |
|
|| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
22892681 |
tcagaacctttggctagaccatgtatgagacaagttgtgcagtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttcttctg |
22892582 |
T |
|
| Q |
516 |
gtttaacttttgggtacaaagaatgtgttgaggac |
550 |
Q |
| |
|
| ||||||||||||||| |||||| | |||||||| |
|
|
| T |
22892581 |
gattaacttttgggtaccaagaattttttgaggac |
22892547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 20 - 550
Target Start/End: Complemental strand, 22814151 - 22813621
Alignment:
| Q |
20 |
catagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcagatc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22814151 |
catagagacataaaagctagtaatgtgttattagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgaccatggtgcagatc |
22814052 |
T |
|
| Q |
120 |
ctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttggtgc |
219 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| |
|
|
| T |
22814051 |
ctcacacaactcatttggctggaacaattggttatcttgctcctgaacatattagaacaggtaaggccactaaattttctgatatgttttcttttggtgc |
22813952 |
T |
|
| Q |
220 |
atttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaaaga |
319 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||| | ||| || || || || ||| ||||| | ||||||| ||| ||||| |||||||||||| |
|
|
| T |
22813951 |
atttcttcttgaggttgcttgtggtagaaggcctatttctaatgttggggaaaatgaaagtgtaattttggttgattgtgtatttgagtgttggaaaaga |
22813852 |
T |
|
| Q |
320 |
ggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacattccg |
419 |
Q |
| |
|
||||| ||||||||||||||||||| | |||| || ||||| || |||||||||||||| || ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
22813851 |
ggtgatattcttgaggcaaaagatgtaaatttggggacaaattatgtgtctgaagaggttgagttggtgttgaaacttggtttgttgtgttcacattcag |
22813752 |
T |
|
| Q |
420 |
agcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttggttt |
519 |
Q |
| |
|
| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| || |
|
|
| T |
22813751 |
aacctttggctagaccaggtatgagacaagttgtgcagtatttggagcgggatatacctttgccagatttgccttcgcttagtttatcttcttctggatt |
22813652 |
T |
|
| Q |
520 |
aacttttgggtacaaagaatgtgttgaggac |
550 |
Q |
| |
|
||||||||||||| |||||| | |||||||| |
|
|
| T |
22813651 |
aacttttgggtaccaagaatattttgaggac |
22813621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 17 - 550
Target Start/End: Complemental strand, 22897396 - 22896863
Alignment:
| Q |
17 |
attcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcag |
116 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| |||||| |||||| |||| |||||| ||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
22897396 |
attcatagagacataaaggctagcaatgtgttattagatggtgaattgaatggtagattaggagattttggtcttgcaaggttgtatgatcatggtgctg |
22897297 |
T |
|
| Q |
117 |
atcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttgg |
216 |
Q |
| |
|
||||||||||||||||||||| ||||||| | || ||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22897296 |
atcctcacacaactcatttggttggaactgtagggtatctagcacctgaacatactagaacaggtaaggctactaaattttctgatgtgttttcttttgg |
22897197 |
T |
|
| Q |
217 |
tgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgttggaaa |
316 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |||||||| | ||| | || || || | ||||| | ||||||| ||| ||||| ||||||||| |
|
|
| T |
22897196 |
tgcatttcttctcgaggttgcttgtggtagaaggcctattgaaaatgtagcggaaaatgaatgcgtaattttggttgattgtgtctttgagtgttggaaa |
22897097 |
T |
|
| Q |
317 |
agaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacatt |
416 |
Q |
| |
|
|| ||| | ||||||||||||||||||| | |||| || ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22897096 |
aggggtaatattcttgaggcaaaagatgtaaatttggggacaaactatgtgtctgaagaggttgaattggtgttgaaacttggtttgttgtgttcacatt |
22896997 |
T |
|
| Q |
417 |
ccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttcttttgg |
516 |
Q |
| |
|
| || ||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
22896996 |
cagaacctttggctagaccaggtatgagacaagttgtacagtatttggaaagggatatacctttaccagatttgtctttgcttagtttatcttcttctgg |
22896897 |
T |
|
| Q |
517 |
tttaacttttgggtacaaagaatgtgttgaggac |
550 |
Q |
| |
|
|||||||||||||||| |||||| | |||||||| |
|
|
| T |
22896896 |
tttaacttttgggtaccaagaattttttgaggac |
22896863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 112 - 535
Target Start/End: Complemental strand, 22879669 - 22879246
Alignment:
| Q |
112 |
tgcagatcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttct |
211 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
22879669 |
tgcagatcctcacaaaactcatttggctggaactattggttatcttgctcatgaacatattagaacaggtaaggcgactaaattttctgatatgttttct |
22879570 |
T |
|
| Q |
212 |
tttggtgcatttcttcttgaggttgtttgtggtaggaggcctataggtcgtgtgggagacaacgagagtctaattctagttgattatgtgtttgaatgtt |
311 |
Q |
| |
|
||||||||||||||||||||||||| |||||| || ||||||| | | ||| || || || || || ||||| | |||||| ||||||||| |||| |
|
|
| T |
22879569 |
tttggtgcatttcttcttgaggttgcttgtggaagagggcctattgctaatgtaggggaaaatgaatgtgtaattttggttgatagtgtgtttgagtgtt |
22879470 |
T |
|
| Q |
312 |
ggaaaagaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttc |
411 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | |||| || ||| | || ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22879469 |
ggaaaagaggtgatattcttgaggcaaaagatgtaaatttggggacagattatgtgtctgaagaggtggaattggtgttgaaacttggtttgttgtgttc |
22879370 |
T |
|
| Q |
412 |
acattccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcgcttagtttatcttct |
511 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
22879369 |
acattcagaacctttggctagaccaggtatgagacaagttgtgcagtatttggagagggatatacctttgccagatttgtctttgcctagtttatcttct |
22879270 |
T |
|
| Q |
512 |
tttggtttaacttttgggtacaaa |
535 |
Q |
| |
|
| ||| |||||||||||| ||||| |
|
|
| T |
22879269 |
tctggattaacttttgggaacaaa |
22879246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 366 - 599
Target Start/End: Complemental strand, 22870612 - 22870379
Alignment:
| Q |
366 |
tgtctgaagaggtggaattggtgttgaaacttggcttgttgtgttcacattccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttgga |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22870612 |
tgtctgaagaggtggaattggtgttgaaacttggcttgatgtgttcacattcagagcctttggctagaccaagtatgagacaagttgtgcagtatttgga |
22870513 |
T |
|
| Q |
466 |
gagggatatacctttgccagatttgtcttcgcttagtttatcttcttttggtttaacttttgggtacaaagaatgtgttgaggacaagacaatgccatat |
565 |
Q |
| |
|
||||||||||||||| |||| |||||| | ||||||||||||||| | ||| |||||||||||| || ||||| |||||||||||||||| |||||||| |
|
|
| T |
22870512 |
gagggatatacctttaccagctttgtcattgcttagtttatcttcctatggattaacttttgggcaccaagaacttgttgaggacaagacagtgccatat |
22870413 |
T |
|
| Q |
566 |
acttctgtgtctattgctgaatctgttctctctg |
599 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
22870412 |
acttctgtgtctattgctgaatctgttctctctg |
22870379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 472
Target Start/End: Complemental strand, 22912792 - 22912331
Alignment:
| Q |
17 |
attcatagagacataaaagctagtaatgtgttgttagattctgaatttaatgctagattgggagattttggtctttcaaggttgtatgatcatggtgcag |
116 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||||| |||| | |||| |||||| || ||||||||| | ||||| || ||||||||||| | | |
|
|
| T |
22912792 |
attcatagagacattaaagctagtaatgttttattagatggtgaaatgaatggtagattaggtgattttggtttatcaagattatatgatcatggaactg |
22912693 |
T |
|
| Q |
117 |
atcctcacacaactcatttggctggaactattggttatcttgctccggaacatattagaacaggtaaggctactaaatcttctgatgtgttttcttttgg |
216 |
Q |
| |
|
||||||| ||||| ||| | | |||||| |||||||| | || || ||||||| ||||||||||| ||||| | | ||||||||||| ||||||||| |
|
|
| T |
22912692 |
atcctcaaacaacacatgttgttggaacacttggttatttagcaccagaacatacaagaacaggtaaagctacaacaagttctgatgtgtattcttttgg |
22912593 |
T |
|
| Q |
217 |
tgcatttcttcttgaggttgtttgtggtaggaggcctataggtc--gtgtggga----gacaacgagagtctaattctagttgattatgtgtttgaatgt |
310 |
Q |
| |
|
||||||| | |||||||| |||||||||| || ||||| | | || |||| || | |||||| ||||| | ||||||||||| | ||| ||| |
|
|
| T |
22912592 |
tgcatttttacttgaggtagtttgtggtaaaagacctattgaacaagtaagggaatgtgagagtgagagtataattttggttgattatgtttatgattgt |
22912493 |
T |
|
| Q |
311 |
tggaaaagaggtgaaattcttgaggcaaaagatgcatatttaggaacaaaatacgtgtctgaagaggtggaattggtgttgaaacttggcttgttgtgtt |
410 |
Q |
| |
|
|||||||||||||| ||| ||||||| ||||||| ||||||| | || ||| |||||| || |||||||| ||||||||||| ||||| |||| |
|
|
| T |
22912492 |
tggaaaagaggtgagattattgaggctaaagatgtgaatttaggtgtggattatgtggttgaagaagttgaattggttttgaaacttggtttgttatgtt |
22912393 |
T |
|
| Q |
411 |
cacattccgagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagagggat |
472 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| |||||| || |||||||||||||||| |
|
|
| T |
22912392 |
cacattgtgaggctttggctagaccaagtatgagacaagttttgaggtatttggagagggat |
22912331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 22879716 - 22879667
Alignment:
| Q |
20 |
catagagacataaaagctagtaatgtgttgttagattctgaatttaatgc |
69 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22879716 |
catagagacataaaagctagtaatgtgttgttagattctgaattcaatgc |
22879667 |
T |
|
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