View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1545_low_55 (Length: 255)
Name: NF1545_low_55
Description: NF1545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1545_low_55 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 40624074 - 40623840
Alignment:
| Q |
14 |
atatgtgttgactgtaatttgcattttgttaactgaattaacccgttaacaagtgttttaataatcttgttaaggattgtgcttttacctcttcttatga |
113 |
Q |
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| T |
40624074 |
atatatgttgactgtaatttgcattttgttaactgaattaacccgttaacaagtgttttaataatcttgttaaggattgtgcttttacctcttcttatga |
40623975 |
T |
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| Q |
114 |
aggctaaattaagattctaaaaataataaaaagcaattagctagaatacttatgaagttagcatgaataataggaatacatgcacataatttagaagttt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40623974 |
aggctaaattaagattctaaaaataataaaaagcaattagctagaatacttatgaagttagcatgaataataggaatacatgcacataatttagaagttt |
40623875 |
T |
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| Q |
214 |
aataggtacaataaacaaatgcattaattaagagg |
248 |
Q |
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| T |
40623874 |
actaggtacaataaacaaatgcattaattaagagg |
40623840 |
T |
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