View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15461_high_14 (Length: 285)
Name: NF15461_high_14
Description: NF15461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15461_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 15073654 - 15073925
Alignment:
| Q |
1 |
cctatgatgtcactcgttgctcctactagcaacannnnnnncagtaataataattgttgttatgaaatcagaataatctttcggtgattataagtttggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15073654 |
cctatgatgtcactcgttgctcctactagcaacattttttgcagtaataataattgttgttatgaaatcagaataatctttcggtgattataagtttggt |
15073753 |
T |
|
| Q |
101 |
tttgttgtaattgaagagaattgttatttgttatgttattcagtttcttttggcctgatttgaaatattattaactaccttgttgacttgttgatccatt |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15073754 |
tttgttgtaattgtagagaattgttatttgttatgttattcagtttcttttggcctgatttgaaatattattaactaccttgttgacttgttgatccatt |
15073853 |
T |
|
| Q |
201 |
cattgtgtagcataaagtaatgtgtggaaatggaattgacttactttaacttttgaaattatgagctatatt |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15073854 |
cattgtgtagcataaagtaatgtgtggaaatggaattgacttactttaacttttgaaattatgagctatatt |
15073925 |
T |
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