View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15462_high_7 (Length: 240)
Name: NF15462_high_7
Description: NF15462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15462_high_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4922307 - 4922068
Alignment:
| Q |
1 |
aataaaaggcaagaagaacataaagagaggcaagggaatcgagaattggacattttaggcgatccctagaaaatactcatcgacaaaaggtaaggtgtgt |
100 |
Q |
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| T |
4922307 |
aataaaaggcaagaagaacataaagagaggcaagggaatcgagaattggacattttaggcgatccctagaaaatactcatcgacaaaaggtaaggtgtgt |
4922208 |
T |
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| Q |
101 |
agaggttacccatcaaaattgacattaataaaaataatttatttgccttcctattgttgatggataaataagaatgcaccataaaaatagtttaataaaa |
200 |
Q |
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| T |
4922207 |
agaggttacccatcaaaattgacattaataaaaataatttatttgccttcctattattgatggataaataagaatgcaccataaaaatagtttaataaaa |
4922108 |
T |
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| Q |
201 |
tttaacactttaccacaaatcgtgttgacttcaattggtt |
240 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| |
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| T |
4922107 |
tttaacactttaccacaaatcgcgttgacttcaattggtt |
4922068 |
T |
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