View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15463_low_12 (Length: 250)

Name: NF15463_low_12
Description: NF15463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15463_low_12
NF15463_low_12
[»] chr7 (42 HSPs)
chr7 (1-240)||(22073182-22073419)
chr7 (1-213)||(16219358-16219571)
chr7 (11-164)||(16056604-16056757)
chr7 (33-240)||(12255409-12255614)
chr7 (33-217)||(2279756-2279941)
chr7 (15-213)||(47832088-47832287)
chr7 (1-213)||(16324272-16324485)
chr7 (11-204)||(9389346-9389541)
chr7 (1-193)||(44014439-44014633)
chr7 (1-186)||(68011-68198)
chr7 (47-195)||(21064822-21064971)
chr7 (49-194)||(810790-810936)
chr7 (37-194)||(12756378-12756535)
chr7 (51-194)||(18005963-18006101)
chr7 (49-201)||(15143691-15143844)
chr7 (34-164)||(44116804-44116933)
chr7 (33-194)||(17061621-17061783)
chr7 (43-194)||(38227788-38227940)
chr7 (100-217)||(2529615-2529733)
chr7 (124-201)||(28504955-28505033)
chr7 (98-191)||(14045187-14045281)
chr7 (98-191)||(14355217-14355311)
chr7 (42-194)||(9509495-9509649)
chr7 (120-201)||(16385912-16385994)
chr7 (120-201)||(40443762-40443844)
chr7 (121-201)||(15754541-15754622)
chr7 (98-181)||(12901768-12901852)
chr7 (98-191)||(14036637-14036731)
chr7 (98-191)||(14346667-14346761)
chr7 (99-191)||(1867650-1867743)
chr7 (120-201)||(27847498-27847580)
chr7 (121-193)||(3564026-3564099)
chr7 (42-91)||(26212302-26212351)
chr7 (50-142)||(35366540-35366631)
chr7 (50-89)||(9177431-9177470)
chr7 (121-194)||(12699218-12699292)
chr7 (40-90)||(15008263-15008313)
chr7 (15-88)||(12901609-12901682)
chr7 (101-181)||(15008118-15008199)
chr7 (42-91)||(40443695-40443744)
chr7 (146-201)||(11995712-11995768)
chr7 (101-206)||(17017040-17017146)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-240)||(32802-33039)
scaffold0034 (121-194)||(51545-51619)
[»] scaffold0556 (2 HSPs)
scaffold0556 (21-240)||(8302-8519)
scaffold0556 (1-194)||(7076-7271)
[»] chr6 (38 HSPs)
chr6 (11-240)||(23019683-23019910)
chr6 (20-213)||(25644607-25644801)
chr6 (1-213)||(27332926-27333139)
chr6 (1-213)||(27393666-27393879)
chr6 (50-201)||(22080391-22080543)
chr6 (53-204)||(25956272-25956424)
chr6 (1-194)||(4667874-4668068)
chr6 (1-194)||(4674721-4674915)
chr6 (1-186)||(19652460-19652647)
chr6 (1-194)||(4185484-4185678)
chr6 (1-194)||(4189222-4189416)
chr6 (34-194)||(18457014-18457174)
chr6 (49-194)||(29808544-29808691)
chr6 (99-217)||(9098087-9098206)
chr6 (49-194)||(28496134-28496280)
chr6 (120-194)||(20360632-20360707)
chr6 (42-194)||(29060847-29061000)
chr6 (42-194)||(19303202-19303355)
chr6 (120-201)||(20637948-20638030)
chr6 (121-201)||(1561689-1561770)
chr6 (98-217)||(20109578-20109698)
chr6 (15-90)||(19668653-19668728)
chr6 (42-161)||(25629050-25629169)
chr6 (120-201)||(18821484-18821566)
chr6 (121-194)||(22779888-22779962)
chr6 (1-91)||(31155163-31155253)
chr6 (120-201)||(16920298-16920380)
chr6 (50-88)||(17106048-17106086)
chr6 (121-194)||(18409488-18409562)
chr6 (42-91)||(11185808-11185857)
chr6 (42-91)||(16920399-16920448)
chr6 (55-88)||(18177438-18177471)
chr6 (55-88)||(18204400-18204433)
chr6 (50-91)||(18821585-18821626)
chr6 (42-91)||(20360726-20360775)
chr6 (50-162)||(16830111-16830223)
chr6 (100-164)||(19023814-19023878)
chr6 (99-204)||(19668812-19668918)
[»] scaffold0078 (1 HSPs)
scaffold0078 (11-217)||(10804-11011)
[»] chr5 (29 HSPs)
chr5 (15-240)||(26011652-26011875)
chr5 (33-240)||(22144348-22144553)
chr5 (1-213)||(21329137-21329351)
chr5 (1-217)||(5888813-5889031)
chr5 (1-217)||(21741181-21741399)
chr5 (5-194)||(22959194-22959385)
chr5 (33-194)||(21565842-21566004)
chr5 (1-93)||(21501917-21502008)
chr5 (88-213)||(21498659-21498785)
chr5 (33-194)||(11580906-11581068)
chr5 (1-201)||(21871225-21871426)
chr5 (1-201)||(21875505-21875706)
chr5 (33-201)||(1096765-1096934)
chr5 (42-194)||(21985808-21985961)
chr5 (33-204)||(36154479-36154651)
chr5 (1-194)||(19669164-19669360)
chr5 (44-194)||(23390157-23390309)
chr5 (100-217)||(20026501-20026619)
chr5 (98-206)||(22177792-22177901)
chr5 (120-201)||(21292635-21292717)
chr5 (42-194)||(24529527-24529681)
chr5 (121-201)||(19660491-19660572)
chr5 (121-184)||(9078338-9078402)
chr5 (50-88)||(25744036-25744074)
chr5 (42-91)||(9078259-9078308)
chr5 (42-91)||(21292736-21292785)
chr5 (42-91)||(22075325-22075374)
chr5 (121-201)||(22119847-22119928)
chr5 (41-89)||(20469654-20469702)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-217)||(7695-7912)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-213)||(6878-7092)
scaffold0333 (1-213)||(14258-14472)
[»] chr3 (48 HSPs)
chr3 (37-217)||(2050839-2051018)
chr3 (33-240)||(52523345-52523550)
chr3 (15-205)||(324515-324706)
chr3 (15-213)||(14234770-14234969)
chr3 (1-201)||(15471190-15471391)
chr3 (17-217)||(1465047-1465249)
chr3 (33-194)||(17247947-17248109)
chr3 (34-217)||(42386710-42386894)
chr3 (34-194)||(53070360-53070520)
chr3 (1-194)||(12933971-12934166)
chr3 (1-186)||(16097595-16097782)
chr3 (49-194)||(32307983-32308128)
chr3 (98-205)||(605941-606049)
chr3 (42-184)||(40213392-40213535)
chr3 (17-90)||(37250932-37251005)
chr3 (49-184)||(49667754-49667890)
chr3 (1-91)||(12171869-12171960)
chr3 (54-194)||(9513228-9513370)
chr3 (54-194)||(9521203-9521345)
chr3 (20-183)||(14572873-14573037)
chr3 (100-206)||(23275106-23275213)
chr3 (100-214)||(23412814-23412929)
chr3 (42-194)||(25476046-25476199)
chr3 (98-206)||(43927543-43927652)
chr3 (122-194)||(49389305-49389378)
chr3 (49-186)||(1644352-1644489)
chr3 (100-212)||(14501564-14501677)
chr3 (50-194)||(11424424-11424569)
chr3 (121-201)||(14179708-14179789)
chr3 (98-195)||(12378359-12378457)
chr3 (100-212)||(45797608-45797721)
chr3 (121-194)||(18438920-18438994)
chr3 (120-201)||(20698101-20698183)
chr3 (42-194)||(26687193-26687347)
chr3 (42-194)||(14973161-14973314)
chr3 (99-164)||(37250804-37250869)
chr3 (123-194)||(16104168-16104240)
chr3 (121-183)||(14576505-14576568)
chr3 (121-183)||(17488243-17488306)
chr3 (121-183)||(17499725-17499788)
chr3 (98-204)||(22109926-22110033)
chr3 (50-88)||(606135-606173)
chr3 (121-201)||(12340138-12340219)
chr3 (50-87)||(13210096-13210133)
chr3 (42-91)||(20698202-20698251)
chr3 (121-184)||(13442660-13442724)
chr3 (50-90)||(22110116-22110156)
chr3 (42-86)||(23083132-23083176)
[»] chr4 (36 HSPs)
chr4 (1-217)||(15099615-15099833)
chr4 (1-213)||(39705930-39706143)
chr4 (1-204)||(15190582-15190787)
chr4 (33-240)||(52242811-52243016)
chr4 (33-217)||(15464567-15464752)
chr4 (64-217)||(43198226-43198380)
chr4 (50-204)||(13844854-13845009)
chr4 (1-193)||(8846639-8846834)
chr4 (33-186)||(44928592-44928746)
chr4 (100-217)||(15868273-15868391)
chr4 (1-194)||(12774264-12774458)
chr4 (34-194)||(21814964-21815124)
chr4 (34-194)||(21815293-21815453)
chr4 (34-194)||(21818386-21818546)
chr4 (100-212)||(32851816-32851929)
chr4 (98-213)||(13415-13532)
chr4 (121-195)||(16597031-16597106)
chr4 (120-195)||(3097017-3097093)
chr4 (42-164)||(15091203-15091326)
chr4 (98-164)||(12287825-12287891)
chr4 (42-194)||(14038955-14039109)
chr4 (33-91)||(44102508-44102566)
chr4 (99-164)||(53081789-53081854)
chr4 (49-89)||(13616-13656)
chr4 (120-183)||(12903131-12903195)
chr4 (120-201)||(14052967-14053049)
chr4 (44-91)||(7089185-7089232)
chr4 (121-194)||(16239653-16239728)
chr4 (44-91)||(17047838-17047885)
chr4 (121-194)||(6190819-6190893)
chr4 (120-181)||(7089251-7089313)
chr4 (42-91)||(3096949-3096998)
chr4 (42-91)||(7799003-7799052)
chr4 (42-91)||(12903063-12903112)
chr4 (121-201)||(15552199-15552280)
chr4 (121-201)||(24029127-24029208)
[»] scaffold0138 (1 HSPs)
scaffold0138 (15-201)||(13220-13407)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-204)||(15481-15686)
[»] scaffold0116 (2 HSPs)
scaffold0116 (50-201)||(43438-43590)
scaffold0116 (50-201)||(47358-47510)
[»] chr8 (38 HSPs)
chr8 (11-217)||(39834107-39834315)
chr8 (11-213)||(6520644-6520847)
chr8 (17-213)||(38854893-38855090)
chr8 (11-126)||(21285874-21285989)
chr8 (1-186)||(21673970-21674157)
chr8 (1-186)||(23760509-23760695)
chr8 (49-181)||(19801101-19801234)
chr8 (33-194)||(41598482-41598644)
chr8 (1-186)||(26355367-26355554)
chr8 (100-207)||(13507657-13507765)
chr8 (100-207)||(13597189-13597297)
chr8 (99-217)||(20499024-20499143)
chr8 (42-164)||(22875372-22875494)
chr8 (42-201)||(20536514-20536675)
chr8 (125-204)||(21491382-21491462)
chr8 (20-194)||(23406665-23406841)
chr8 (124-201)||(5865931-5866009)
chr8 (42-194)||(6759563-6759717)
chr8 (124-201)||(17141302-17141380)
chr8 (120-195)||(45130691-45130767)
chr8 (98-206)||(17266565-17266674)
chr8 (121-194)||(18878898-18878972)
chr8 (98-206)||(982975-983084)
chr8 (98-184)||(17439100-17439187)
chr8 (169-240)||(21286656-21286724)
chr8 (121-201)||(21918664-21918745)
chr8 (98-184)||(24353463-24353550)
chr8 (34-195)||(21414887-21415049)
chr8 (121-194)||(7373135-7373209)
chr8 (121-194)||(18818071-18818145)
chr8 (49-91)||(21918766-21918808)
chr8 (125-194)||(22627125-22627195)
chr8 (120-201)||(31971629-31971711)
chr8 (42-91)||(18818175-18818224)
chr8 (121-201)||(21255605-21255686)
chr8 (98-184)||(37116787-37116874)
chr8 (120-164)||(25362843-25362887)
chr8 (50-90)||(37116664-37116704)
[»] chr2 (25 HSPs)
chr2 (33-217)||(23708257-23708441)
chr2 (33-201)||(25176140-25176309)
chr2 (20-204)||(23076726-23076910)
chr2 (20-194)||(23660307-23660482)
chr2 (42-194)||(298476-298629)
chr2 (15-90)||(23207559-23207634)
chr2 (1-184)||(28406244-28406429)
chr2 (124-201)||(23071617-23071695)
chr2 (98-217)||(18786446-18786566)
chr2 (42-164)||(22337422-22337544)
chr2 (125-194)||(22133878-22133948)
chr2 (98-181)||(22412733-22412817)
chr2 (121-194)||(22730894-22730968)
chr2 (125-194)||(22737841-22737911)
chr2 (120-201)||(23654064-23654146)
chr2 (37-90)||(22412900-22412953)
chr2 (98-181)||(23207717-23207801)
chr2 (120-201)||(23286235-23286317)
chr2 (121-194)||(27753961-27754035)
chr2 (42-194)||(32451590-32451744)
chr2 (120-195)||(37787-37863)
chr2 (33-90)||(20519957-20520014)
chr2 (120-164)||(20309479-20309523)
chr2 (98-181)||(20519790-20519874)
chr2 (50-86)||(31756232-31756268)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-186)||(130172-130359)
scaffold0010 (33-90)||(60479-60536)
scaffold0010 (98-181)||(60312-60396)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-194)||(3197-3392)
[»] chr1 (39 HSPs)
chr1 (1-217)||(28194086-28194304)
chr1 (1-201)||(22921521-22921723)
chr1 (1-194)||(52927642-52927836)
chr1 (1-217)||(35981325-35981542)
chr1 (11-194)||(33681284-33681469)
chr1 (1-164)||(20637115-20637279)
chr1 (87-204)||(43697712-43697830)
chr1 (1-191)||(20248542-20248734)
chr1 (11-194)||(22237905-22238089)
chr1 (40-194)||(433312-433467)
chr1 (49-194)||(21754350-21754495)
chr1 (42-183)||(50209885-50210027)
chr1 (100-217)||(21861132-21861250)
chr1 (33-90)||(26065238-26065295)
chr1 (42-193)||(34510087-34510239)
chr1 (100-217)||(21895870-21895989)
chr1 (100-217)||(16759091-16759209)
chr1 (120-201)||(22355839-22355921)
chr1 (120-201)||(22357525-22357607)
chr1 (100-217)||(21342513-21342631)
chr1 (100-217)||(21347378-21347496)
chr1 (43-194)||(22532577-22532729)
chr1 (98-181)||(26065357-26065441)
chr1 (1-84)||(49261606-49261690)
chr1 (120-201)||(27250394-27250476)
chr1 (37-83)||(35260852-35260898)
chr1 (98-164)||(50687031-50687097)
chr1 (98-184)||(16367881-16367968)
chr1 (124-184)||(20918990-20919051)
chr1 (33-89)||(16758949-16759005)
chr1 (98-181)||(35260729-35260813)
chr1 (120-194)||(20846891-20846966)
chr1 (98-204)||(41049619-41049726)
chr1 (120-201)||(38801056-38801138)
chr1 (49-91)||(38801157-38801199)
chr1 (52-89)||(21861335-21861372)
chr1 (42-91)||(22354338-22354387)
chr1 (100-164)||(16093508-16093572)
chr1 (50-162)||(24087730-24087842)
[»] scaffold0243 (1 HSPs)
scaffold0243 (2-217)||(5760-5976)
[»] scaffold0530 (1 HSPs)
scaffold0530 (2-217)||(666-888)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-194)||(19531-19726)
[»] scaffold1984 (1 HSPs)
scaffold1984 (11-194)||(405-590)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-186)||(2313-2499)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-194)||(9342-9536)
[»] scaffold0012 (2 HSPs)
scaffold0012 (92-184)||(227849-227942)
scaffold0012 (33-97)||(225705-225769)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-194)||(45450-45646)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-184)||(6801-6987)
scaffold0621 (49-89)||(8784-8824)
[»] scaffold0320 (1 HSPs)
scaffold0320 (68-217)||(12329-12478)
[»] scaffold0839 (1 HSPs)
scaffold0839 (33-184)||(1748-1900)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-194)||(160950-161145)
[»] scaffold0228 (3 HSPs)
scaffold0228 (42-194)||(4814-4968)
scaffold0228 (42-194)||(12396-12550)
scaffold0228 (42-194)||(22348-22502)
[»] scaffold0028 (1 HSPs)
scaffold0028 (49-194)||(132967-133113)
[»] scaffold0023 (2 HSPs)
scaffold0023 (11-164)||(39864-40018)
scaffold0023 (122-194)||(101781-101854)
[»] scaffold0503 (1 HSPs)
scaffold0503 (34-194)||(12228-12388)
[»] scaffold0555 (2 HSPs)
scaffold0555 (11-113)||(10283-10385)
scaffold0555 (135-195)||(10228-10289)
[»] scaffold0150 (1 HSPs)
scaffold0150 (49-194)||(32397-32543)
[»] scaffold0165 (4 HSPs)
scaffold0165 (98-216)||(27281-27400)
scaffold0165 (48-89)||(27485-27526)
scaffold0165 (120-201)||(3855-3937)
scaffold0165 (120-201)||(7919-8001)
[»] scaffold0142 (1 HSPs)
scaffold0142 (33-194)||(17078-17240)
[»] scaffold0076 (1 HSPs)
scaffold0076 (98-206)||(24169-24279)
[»] scaffold0031 (1 HSPs)
scaffold0031 (34-194)||(20087-20247)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-90)||(7841-7930)
scaffold0218 (125-200)||(28935-29011)
[»] scaffold0122 (1 HSPs)
scaffold0122 (42-194)||(25726-25879)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-194)||(28470-28665)
[»] scaffold0021 (6 HSPs)
scaffold0021 (87-194)||(62913-63021)
scaffold0021 (15-90)||(136132-136207)
scaffold0021 (15-90)||(144840-144915)
scaffold0021 (98-204)||(135942-136049)
scaffold0021 (98-204)||(144650-144757)
scaffold0021 (42-91)||(124891-124940)
[»] scaffold0016 (2 HSPs)
scaffold0016 (44-194)||(2159-2311)
scaffold0016 (127-206)||(119200-119280)
[»] scaffold0278 (1 HSPs)
scaffold0278 (108-194)||(5966-6053)
[»] scaffold0056 (3 HSPs)
scaffold0056 (42-194)||(16876-17029)
scaffold0056 (122-201)||(79016-79096)
scaffold0056 (34-78)||(79107-79151)
[»] scaffold0413 (2 HSPs)
scaffold0413 (49-194)||(15276-15422)
scaffold0413 (98-214)||(13007-13124)
[»] scaffold0292 (2 HSPs)
scaffold0292 (42-194)||(649-802)
scaffold0292 (43-184)||(3777-3920)
[»] scaffold0235 (2 HSPs)
scaffold0235 (100-214)||(14004-14119)
scaffold0235 (120-201)||(11178-11260)
[»] scaffold0217 (1 HSPs)
scaffold0217 (43-194)||(16260-16413)
[»] scaffold0145 (1 HSPs)
scaffold0145 (42-194)||(39067-39219)
[»] scaffold0075 (3 HSPs)
scaffold0075 (98-213)||(53113-53230)
scaffold0075 (49-89)||(53314-53354)
scaffold0075 (121-201)||(7948-8029)
[»] scaffold0357 (3 HSPs)
scaffold0357 (33-88)||(15866-15921)
scaffold0357 (98-164)||(13570-13636)
scaffold0357 (98-195)||(3133-3231)
[»] scaffold0080 (2 HSPs)
scaffold0080 (15-90)||(19649-19724)
scaffold0080 (21-91)||(40198-40268)
[»] scaffold0040 (2 HSPs)
scaffold0040 (98-204)||(103234-103341)
scaffold0040 (15-90)||(103403-103478)
[»] scaffold0022 (2 HSPs)
scaffold0022 (98-184)||(80701-80788)
scaffold0022 (50-90)||(128735-128775)
[»] scaffold0628 (1 HSPs)
scaffold0628 (49-194)||(2464-2609)
[»] scaffold0627 (1 HSPs)
scaffold0627 (42-186)||(211-356)
[»] scaffold0175 (2 HSPs)
scaffold0175 (124-201)||(34509-34587)
scaffold0175 (42-91)||(13398-13447)
[»] scaffold0161 (1 HSPs)
scaffold0161 (124-201)||(2099-2177)
[»] scaffold0011 (3 HSPs)
scaffold0011 (42-194)||(52218-52372)
scaffold0011 (125-201)||(167644-167721)
scaffold0011 (42-91)||(167745-167794)
[»] scaffold0876 (1 HSPs)
scaffold0876 (121-201)||(2739-2820)
[»] scaffold0395 (2 HSPs)
scaffold0395 (50-163)||(8185-8298)
scaffold0395 (123-194)||(623-695)
[»] scaffold0130 (2 HSPs)
scaffold0130 (98-214)||(1344-1461)
scaffold0130 (123-194)||(28924-28996)
[»] scaffold0120 (3 HSPs)
scaffold0120 (43-195)||(32619-32772)
scaffold0120 (43-195)||(46233-46386)
scaffold0120 (121-184)||(16473-16537)
[»] scaffold0647 (1 HSPs)
scaffold0647 (123-194)||(5782-5854)
[»] scaffold0601 (1 HSPs)
scaffold0601 (100-217)||(7095-7213)
[»] scaffold0598 (2 HSPs)
scaffold0598 (120-201)||(717-799)
scaffold0598 (42-91)||(818-867)
[»] scaffold0456 (1 HSPs)
scaffold0456 (120-195)||(10097-10173)
[»] scaffold0100 (1 HSPs)
scaffold0100 (48-194)||(20425-20572)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-194)||(1962-2157)
[»] scaffold0305 (1 HSPs)
scaffold0305 (50-194)||(20717-20863)
[»] scaffold0123 (1 HSPs)
scaffold0123 (98-184)||(25545-25632)
[»] scaffold0718 (1 HSPs)
scaffold0718 (120-201)||(4796-4878)
[»] scaffold0427 (1 HSPs)
scaffold0427 (120-201)||(13869-13951)
[»] scaffold0358 (4 HSPs)
scaffold0358 (120-201)||(310-392)
scaffold0358 (120-201)||(5086-5168)
scaffold0358 (43-91)||(243-291)
scaffold0358 (43-91)||(5019-5067)
[»] scaffold0352 (1 HSPs)
scaffold0352 (122-195)||(17668-17742)
[»] scaffold0266 (1 HSPs)
scaffold0266 (121-194)||(18619-18693)
[»] scaffold0098 (1 HSPs)
scaffold0098 (123-212)||(29149-29239)
[»] scaffold1842 (2 HSPs)
scaffold1842 (125-201)||(714-791)
scaffold1842 (42-91)||(815-864)
[»] scaffold0351 (1 HSPs)
scaffold0351 (124-204)||(16657-16738)
[»] scaffold0261 (2 HSPs)
scaffold0261 (124-194)||(16047-16118)
scaffold0261 (101-212)||(17909-18021)
[»] scaffold1419 (1 HSPs)
scaffold1419 (50-86)||(338-374)
[»] scaffold0121 (1 HSPs)
scaffold0121 (121-184)||(8203-8267)
[»] scaffold0114 (1 HSPs)
scaffold0114 (119-204)||(15127-15213)
[»] scaffold0737 (1 HSPs)
scaffold0737 (19-90)||(1562-1633)
[»] scaffold0540 (1 HSPs)
scaffold0540 (42-184)||(684-827)
[»] scaffold0109 (1 HSPs)
scaffold0109 (101-217)||(35508-35625)
[»] scaffold0005 (1 HSPs)
scaffold0005 (101-164)||(268094-268157)
[»] scaffold0484 (1 HSPs)
scaffold0484 (120-201)||(1288-1370)
[»] scaffold0403 (1 HSPs)
scaffold0403 (120-201)||(5222-5304)
[»] scaffold0389 (1 HSPs)
scaffold0389 (124-201)||(13262-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (120-201)||(32438-32520)
[»] scaffold0088 (1 HSPs)
scaffold0088 (120-201)||(21275-21357)
[»] scaffold0026 (2 HSPs)
scaffold0026 (121-194)||(39592-39666)
scaffold0026 (121-184)||(40242-40306)
[»] scaffold0141 (1 HSPs)
scaffold0141 (42-91)||(39783-39832)
[»] scaffold0049 (1 HSPs)
scaffold0049 (42-91)||(74980-75029)
[»] scaffold0309 (1 HSPs)
scaffold0309 (43-91)||(6917-6965)
[»] scaffold0064 (1 HSPs)
scaffold0064 (120-201)||(47360-47442)
[»] scaffold0042 (1 HSPs)
scaffold0042 (121-184)||(23973-24037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (120-183)||(51953-52017)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22073182 - 22073419
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22073182 tgcgacaaggatcgcatttaacctaacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactccc 22073281  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  22073282 aaaaatccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaaaacctctaaggtccaa 22073381  T
Q  200 cttaaggggcaaaactactacgaaaccatgtcgactctctg 240  Q
    |||||||||||||   |||||||||||||||||||||||||    
T  22073382 cttaaggggcaaa---actacgaaaccatgtcgactctctg 22073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 16219571 - 16219358
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||  ||||||||||||||||||| | ||||||||||| |  |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16219571 tgcgacaaagatcgcatttaacctaacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgtgtaactccc 16219472  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtccaa 199  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |  |||| || ||||||||||| |||||||| |||    
T  16219471 aaaaattcattcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatctaaggttcaa 16219372  T
Q  200 cttaaggggcaaaa 213  Q
    ||||| || |||||    
T  16219371 cttaaaggtcaaaa 16219358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 16056604 - 16056757
Alignment:
Q  11 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 110  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16056604 atcgcatttaacctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaattcccaaaaatccat 16056703  T
Q  111 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||    
T  16056704 tcttaaactattccaggttcaatctcaatctaaaatctttcctattcattatta 16056757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 12255614 - 12255409
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12255614 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaactattccaggttcaa 12255515  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 231  Q
    ||||| |||||||||||| ||||||||||||| | | ||||| |||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  12255514 tctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 12255418  T
Q  232 gactctctg 240  Q
    |||||||||    
T  12255417 gactctctg 12255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 2279941 - 2279756
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    ||||| ||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2279941 attctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggtgtaacacccaaaaatccattcttaaactattacaggttcaa 2279842  T
Q  133 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    ||||| |||| ||||||| |||||||||||||  ||| |||||||||||||||| | |||||    ||||||||||  |||||||||    
T  2279841 tctcaatctaaaatctttcctaatcattattatgcat-gttcaggcactcaaaatcatctaaatatcaacttaaggatcaaaactac 2279756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 47832088 - 47832287
Alignment:
Q  15 catttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 113  Q
    |||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||||||| ||||||||| | ||||| | ||||    
T  47832088 catttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaactctc-aaaattcgttct 47832186  T
Q  114 taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 212  Q
    ||||||||||||| |||||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| || ||||    
T  47832187 taaactattccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 47832286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 16324272 - 16324485
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||| ||||||||||||||| | |||||||||||||| |  |||| |||||| |||||||||||||||||||||||||   | |||||| |    
T  16324272 tgcgacaaggatcacatttaacctaacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttccaatctaactctc 16324371  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
    |||||| | ||||||||||||||||||||||||||||  ||  ||||||| ||||||||||||| | | ||||| |||||||||||| |  ||||| |||    
T  16324372 aaaaattcgttcttaaactattccaggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaaaacattcaaggttcaa 16324471  T
Q  200 cttaaggggcaaaa 213  Q
    ||||| || |||||    
T  16324472 cttaaaggtcaaaa 16324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 9389541 - 9389346
Alignment:
Q  11 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 109  Q
    ||||| |||||||||| ||| | ||||||||||||  || ||||||||||||  |||||||||||||||||||||||||| |||||||| || |||| |     
T  9389541 atcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagttcagctgtaactcacataaattcg 9389442  T
Q  110 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| |  ||| ||| ||||||||||| || ||||| ||||||||    
T  9389441 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaaaaacatccaaggttcaacttaa 9389346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 44014439 - 44014633
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | |||||||||| || || ||||||||||||  |||||||||| |||||||||||||||||| ||||      
T  44014439 tgcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactaa 44014538  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 193  Q
    ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| ||||||    
T  44014539 caaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaag 44014633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 68011 - 68198
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| |||||||||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||||||||||  |||||||||    
T  68011 tgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcatctgtaactcc 68110  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaac 186  Q
    || || |   |||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||  ||||| ||||||||||| |||||    
T  68111 cacaagtttgttcttaaattattccaggttcaatctcaatctccaatctttcctaatcattattagacata-ttcaggcactcgaaaac 68198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 21064971 - 21064822
Alignment:
Q  47 taactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 146  Q
    |||||| ||||||||  ||||||||||||||||||||||| ||||  ||| | |||||||||||||| | ||||||||| |||||||||||||||| |||    
T  21064971 taactcacgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaat 21064872  T
Q  147 cttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 195  Q
     ||| |||||||||||  ||||| |||||||| |||| |||| ||||||||    
T  21064871 atttcctaatcattattgtacat-gttcaggccctcataaacatctaaggt 21064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 810936 - 810790
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    |||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||| |||||| ||    ||||||||||||||| |||||  |||||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggtacagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatct 810837  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || ||||||||||||| ||| |||||||||||||||||| |||||||    
T  810836 ttcctaatcattattagatatgttcaggcactcaaaaacatctaagg 810790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 12756535 - 12756378
Alignment:
Q  37 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatct 135  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||| ||||||||||  | || ||||||| | |||||||||| || ||||||||||||||    
T  12756535 tgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggt-cagcttccaaaaagttcattcttaaa-taatccaggttcaatct 12756438  T
Q  136 cattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12756437 cattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 12756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 18005963 - 18006101
Alignment:
Q  51 tcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttt 150  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||||||| || | | |||||||||||||  |||||||||||||      |||||||    
T  18005963 tcgcgaggcgagggcctctagtcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattttaggttcaatctca------aatcttt 18006056  T
Q  151 tctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
      |||||||||||| | | |||||||||||||||||| |||||||    
T  18006057 cataatcattattagacatgttcaggcactcaaaaacatctaagg 18006101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 15143844 - 15143691
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    |||||||||||||  |||||| ||||||||||||||| |||||   | || ||||| | |||||| |||   |||||||||||||||||||||| |||||    
T  15143844 actcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatct 15143745  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    || ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  15143744 ttcctaatcattattagacatgttcaggcactcaaaggcatctaaggtacaact 15143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 44116804 - 44116933
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 133  Q
    ||||||||||| || |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| || || |||| ||||||||    
T  44116804 ttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaatct-ttccgggttcaat 44116902  T
Q  134 ctcattctagaatcttttctaatcattatta 164  Q
    ||||||||| | ||||| |||||||||||||    
T  44116903 ctcattctacattctttcctaatcattatta 44116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 17061783 - 17061621
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 131  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||| ||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17061783 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctat-ccaggttca 17061685  T
Q  132 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17061684 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 38227788 - 38227940
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 141  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||| |||| |  |||||| || || |||||||||||||||||||||    
T  38227788 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatct-ttccaggttcaatctcattct 38227886  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  38227887 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 38227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 2529733 - 2529615
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||| |  ||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  2529733 caaaaatccatttttaaactttgtcaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 2529635  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||||||||| |||||||||    
T  2529634 aacttaagggacaaaactac 2529615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 28505033 - 28504955
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  28505033 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 28504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14045187 - 14045281
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 191  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14045187 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14045281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14355217 - 14355311
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 191  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14355217 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 9509495 - 9509649
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  9509495 ctgggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 9509594  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  9509595 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 16385994 - 16385912
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  16385994 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 16385912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 40443762 - 40443844
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  40443762 attccaggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 40443844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 15754622 - 15754541
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 15754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 12901768 - 12901852
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  12901768 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 12901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14036637 - 14036731
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 191  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14036637 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14036731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14346667 - 14346761
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 191  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14346667 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 1867743 - 1867650
Alignment:
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 191  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||| |||||| ||||    
T  1867743 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactaaaaaacatcta 1867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 27847580 - 27847498
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| |||||||| |||| | | |||||||||||||||| | |||||||| |||||    
T  27847580 attccaggttcaatctcatcctaaattctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttcaact 27847498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 3564099 - 3564026
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 193  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  3564099 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 3564026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 26212302 - 26212351
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  26212302 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 35366540 - 35366631
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 142  Q
    ||||||||||||  ||||| |||||||| ||||||||  |||  ||| | ||| |||||||||| | ||||||||| ||||||||||||||||    
T  35366540 ctcgcgaggcgagagcctc-actcgccacggcgagttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattcta 35366631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 9177470 - 9177431
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9177470 ctcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 12699218 - 12699292
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12699218 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 12699292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 15008313 - 15008263
Alignment:
Q  40 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||| ||||||||||||||  |||||||||||| |||| |||||||||    
T  15008313 aactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 12901609 - 12901682
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 88  Q
    ||||||||||||||| |  || ||||| |||  |||||| |||||||  |||||||||||| ||||||||||||    
T  12901609 catttaacctaacaaggtgttttgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttca 12901682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 15008199 - 15008118
Alignment:
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    ||||||||||| | ||||| | ||||||||||||||| |||| ||  || |||||||||||||| | | |||||||||||||    
T  15008199 aaaaatccattttaaaactttcccaggttcaatctcaatctaaaaaattgtctaatcattattatacatgttcaggcactca 15008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 40443695 - 40443744
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  40443695 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 11995768 - 11995712
Alignment:
Q  146 tcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 11995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 17017146 - 17017040
Alignment:
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtcca 198  Q
    ||||||||||| ||||||| |  |  ||||||||||| |||| || |||  ||||||||||||  ||||| ||||||||||||||| | ||||| || ||    
T  17017146 aaaaatccatttttaaactttctcttgttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaagttca 17017048  T
Q  199 acttaagg 206  Q
    ||||||||    
T  17017047 acttaagg 17017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32802 - 33039
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||  ||||||||||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32802 tgcgacaaagatcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactccc 32901  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||| || | ||||| || |||    
T  32902 aaaaatccattcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactcagaatcatctaaagttcaa 33001  T
Q  200 cttaaggggcaaaactactacgaaaccatgtcgactctctg 240  Q
    |||||||  ||||   ||||||||| ||||| |||||||||    
T  33002 cttaaggaccaaa---actacgaaatcatgttgactctctg 33039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 51619 - 51545
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  51619 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 51545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 8302 - 8519
Alignment:
Q  21 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaacta 120  Q
    ||||||||||| ||| |||||||||  |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8302 acctaacaaagcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaacta 8401  T
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactacta 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||| ||| ||||||| | |||||| ||||||||||| ||||   ||||    
T  8402 ttccaggttcaatctcaatctagaatcttttctaatcattattacacatattcagacacccaaaaacatttaaggttcaacttaagggtcaaa---acta 8498  T
Q  220 cgaaaccatgtcgactctctg 240  Q
    ||||| ||||| |||||||||    
T  8499 cgaaatcatgttgactctctg 8519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 7076 - 7271
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| |||||||||||||||| ||| | ||||||||||| | || ||||| ||||||  ||||||||||||||||||||||||||||  |  ||     
T  7076 tgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggttcagttca 7175  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  7176 caaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 23019683 - 23019910
Alignment:
Q  11 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 110  Q
    ||||||||||||||||| ||| ||| ||||| |||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||    
T  23019683 atcgcatttaacctaaccaagcattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagttcaggtgtaactcccaaaaattcat 23019782  T
Q  111 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 209  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||| ||| | |||||||||||||||| | |||||||| ||||||||||| |    
T  23019783 tcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatctaaggttcaacttaagggtc 23019882  T
Q  210 aaaactactacgaaaccatgtcgactctctg 240  Q
    |||   ||||||||| ||||| |||||||||    
T  23019883 aaa---actacgaaatcatgttgactctctg 23019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 25644607 - 25644801
Alignment:
Q  20 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 119  Q
    |||||||  ||| |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25644607 aacctaaacaagcattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgagttcgggtgtaactcccaaaaatccattcttaaact 25644706  T
Q  120 attccaggttcaatctcattctagaatcttttctaatca---ttattacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 213  Q
    ||| |||||||||||||| |||| ||||||| |||||||   ||| ||||| |  ||||||||||||||| |||||||| |||||||| || |||||    
T  25644707 atttcaggttcaatctcaatctaaaatctttcctaatcaacgtta-tacat-gaacaggcactcaaaaacatctaaggttcaacttaaaggtcaaaa 25644801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 27333139 - 27332926
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  27333139 tgcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcac 27333040  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
    |||| | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||| | |||||||| |||    
T  27333039 aaaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttcaa 27332940  T
Q  200 cttaaggggcaaaa 213  Q
    ||||| || |||||    
T  27332939 cttaaaggtcaaaa 27332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 27393879 - 27393666
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  27393879 tgcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcac 27393780  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
    |||| | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||| | |||||||| |||    
T  27393779 aaaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttcaa 27393680  T
Q  200 cttaaggggcaaaa 213  Q
    ||||| || |||||    
T  27393679 cttaaaggtcaaaa 27393666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 201
Target Start/End: Complemental strand, 22080543 - 22080391
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| | |||  ||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatctt 22080444  T
Q  150 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||| | | |||||| ||||||||||| |||||||| |||||    
T  22080443 ttctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaact 22080391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 204
Target Start/End: Complemental strand, 25956424 - 25956272
Alignment:
Q  53 gcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttc 152  Q
    |||||||||  |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggtgtaactccaaaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttc 25956325  T
Q  153 taatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
     |||| | |||| | | |||||||||||||||||  |||||| | ||||||||    
T  25956324 caatcgtaattagacatgttcaggcactcaaaaatatctaagattcaacttaa 25956272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4668068 - 4667874
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || |    
T  4668068 tgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcac 4667969  T
Q  101 aaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 194  Q
    |||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4667968 aaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4674915 - 4674721
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||| ||||  |  || |    
T  4674915 tgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagttaaggttcagttcac 4674816  T
Q  101 aaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 194  Q
    |||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4674815 aaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4674721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 19652460 - 19652647
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||| ||||| ||| | ||| ||||||| | || | ||||||||||  ||||||||||||||||||||||||||||  || ||     
T  19652460 tgcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttcaggtacaattca 19652559  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    ||||||| |||||| ||    |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  19652560 caaaaattcattctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaaaaac 19652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4185678 - 4185484
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    |||| |||| ||||||||||||||| ||| | ||||| ||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || |    
T  4185678 tgcggcaaggatcgcatttaacctagcaaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcac 4185579  T
Q  101 aaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 194  Q
    |||||| ||||| ||||||  ||||||||||||||||| |||| | |||||  ||||| |||||| | | ||||| |||||||||| | |||||||    
T  4185578 aaaaattcattc-taaactctttccaggttcaatctcactctacattctttcataatcgttattagacttgttcatgcactcaaaagcatctaagg 4185484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4189222 - 4189416
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||  ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||| ||||  |  || |    
T  4189222 tgcgacaacgatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtttaggttcagttcac 4189321  T
Q  101 aaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 194  Q
    |||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4189322 aaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4189416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 18457014 - 18457174
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 132  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||| |||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  18457014 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 18457111  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18457112 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 18457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 29808691 - 29808544
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatc 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || |||||||||||||||||||| | ||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T
Q  148 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||| | | |||||||||||||||| | |||||||    
T  29808591 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 29808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 9098206 - 9098087
Alignment:
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat-agttcaggcactcaaaaacctctaaggtcc 197  Q
    ||||||||||||| ||||||| | ||||||||||| ||| ||||||| ||| |||||||||||||| ||  ||||||||||||| || | ||||| || |    
T  9098206 ccaaaaatccatttttaaactttcccaggttcaatatcaatctagaaacttgtctaatcattattatatctgttcaggcactcagaatcatctaaagttc 9098107  T
Q  198 aacttaaggggcaaaactac 217  Q
     ||||||||| |||||||||    
T  9098106 gacttaagggtcaaaactac 9098087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 28496280 - 28496134
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatc 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||   | || ||||| |  |||||| |  || |||||||||||||||||||||| | ||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtct-ttccaggttcaatctcattctacattc 28496182  T
Q  148 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||| | | |||||||||||||||| | |||||||    
T  28496181 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 28496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 20360707 - 20360632
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  20360707 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 20360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 29060847 - 29061000
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  29060847 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 29060946  T
Q  142 agaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 194  Q
    | | || || ||||||||||||  |||| |||||||||||||||| | |||||||    
T  29060947 acattccttcctaatcattattggacat-gttcaggcactcaaaagcatctaagg 29061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 19303355 - 19303202
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||| ||||||||||||||||    
T  19303355 ctgggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaatcttttc-aggttcaatctcattc 19303257  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  19303256 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 19303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 20638030 - 20637948
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  20638030 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 20637948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 1561689 - 1561770
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 20109578 - 20109698
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    ||||| |||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| ||     
T  20109578 cccaataatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagtt 20109677  T
Q  197 caacttaaggggcaaaactac 217  Q
    ||||||||||  |||||||||    
T  20109678 caacttaaggatcaaaactac 20109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19668653 - 19668728
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||||| |  |||||||| |||  | ||||||||||||  |||||||||||| ||||||||||||||    
T  19668653 catttaacctaacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 25629169 - 25629050
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||| ||||||| ||||||| |||||   | || ||||| |  ||||| |||   |||||||||||||||||||||    
T  25629169 ctgggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattct 25629070  T
Q  142 agaatcttttctaatcatta 161  Q
    | ||| ||| ||||||||||    
T  25629069 acaatatttcctaatcatta 25629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 18821566 - 18821484
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  18821566 attccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggttcaact 18821484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 22779962 - 22779888
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22779962 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22779888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31155253 - 31155163
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||||||| | ||||||||||||||||| | ||  |||||  ||||| ||||||||||||  |||||| |||||||||| |||| |||||    
T  31155253 tgcgacaaggaccgcatttaacctaacaaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagtacaggt 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 16920380 - 16920298
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||| |||||| || ||| | ||||||||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  16920380 attccaggtacaatcttatcctacattcttttctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 16920298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 17106048 - 17106086
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttca 88  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  17106048 ctcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 18409562 - 18409488
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||| |||||||||||| | |||||||    
T  18409562 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggcactcaaaagcatctaagg 18409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 11185808 - 11185857
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||| |||||||| ||||||| |||||| ||||||||||||||    
T  11185808 ctgggtcactcacgaggcgagggcctctgctcgccgtggcgagttcaggt 11185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 16920448 - 16920399
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||| ||||||  |||||| |||||||||||||||||||||    
T  16920448 ctgggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggt 16920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  55 gaggcgatggcctctactcgccatggcgagttca 88  Q
    ||||||| ||||||||||||||||||||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  55 gaggcgatggcctctactcgccatggcgagttca 88  Q
    ||||||| ||||||||||||||||||||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 18821626 - 18821585
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 20360775 - 20360726
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||||    
T  20360775 ctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggt 20360726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 16830111 - 16830223
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||||||  |||||||||||||| |||||||| ||||  ||| | ||| |||||||||| |  |  ||||  |||||||||||||||| ||  ||    
T  16830111 ctcgcgaggcgagagcctctactcgccacggcgagttaaggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 16830210  T
Q  150 ttctaatcattat 162  Q
      |||||||||||    
T  16830211 gcctaatcattat 16830223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 19023814 - 19023878
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    |||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||||||    
T  19023814 caaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattatta 19023878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 19668812 - 19668918
Alignment:
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||| |||| |||||||   ||||||||||||||| | || || ||| ||||||||||||  ||||| |||||| |||||| |||| ||||||||     
T  19668812 ccaaaaattcatttttaaacttccccaggttcaatctcaatataaaaacttgtctaatcattatgatacat-gttcagacactcagaaacatctaaggtt 19668910  T
Q  197 caacttaa 204  Q
    | ||||||    
T  19668911 cgacttaa 19668918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 10804 - 11011
Alignment:
Q  11 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 110  Q
    ||||||||||||||||||| | ||| || |||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||| |||    
T  10804 atcgcatttaacctaacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcacaaaaattcat 10903  T
Q  111 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 209  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||| | ||||||||||  |    
T  10904 tcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaaaacatctaagattcaacttaaggatc 11003  T
Q  210 aaaactac 217  Q
    ||||||||    
T  11004 aaaactac 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 26011875 - 26011652
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 114  Q
    ||||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26011875 catttaacctaacaaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 26011776  T
Q  115 aaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 213  Q
    ||||||||||||||||||||||| | ||||||||||  |||||||||||||| | ||| || |||||| || | ||||| || ||||||||||  ||||     
T  26011775 aaactattccaggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactcataatcatctaaagttcaacttaaggatcaaa- 26011677  T
Q  214 ctactacgaaaccatgtcgactctctg 240  Q
      ||||||||| ||||| |||||||||    
T  26011676 --actacgaaatcatgttgactctctg 26011652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 22144348 - 22144553
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22144348 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttcaa 22144447  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 231  Q
    ||||| |||||||||||| ||||||||| ||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  22144448 tctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 22144544  T
Q  232 gactctctg 240  Q
    |||||||||    
T  22144545 gactctctg 22144553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 21329351 - 21329137
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | ||||||||||| ||||| |||||||||||  |||||||||||| |||||||||||| ||| ||||||    
T  21329351 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagtgcaactcc 21329252  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    ||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||| | || | | |||||||||||||||||| |||||||| ||    
T  21329251 caaaaattcattcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatctaaggttca 21329152  T
Q  199 acttaaggggcaaaa 213  Q
    |||||| || |||||    
T  21329151 acttaaaggtcaaaa 21329137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5889031 - 5888813
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| |||||     
T  5889031 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 5888932  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||| || |||||||||||||||||| ||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||| | |    
T  5888931 caaagattcattcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaagcttc 5888833  T
Q  198 aacttaaggggcaaaactac 217  Q
     |||||| || |||||||||    
T  5888832 gacttaaaggtcaaaactac 5888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21741399 - 21741181
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||| ||||||||||  |||| ||| ||||||||| || ||| ||||||||  ||||||||||||||||||||||||||||| |||||     
T  21741399 tgcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 21741300  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    || |||| | |||||||||||||||||||||||||||| |||| ||||||| ||| |||| ||  |||| ||||||||||||||||||  |||||||| |    
T  21741299 cataaattcgttcttaaactattccaggttcaatctcaatctataatctttcctattcatcatcataca-agttcaggcactcaaaaatatctaaggttc 21741201  T
Q  198 aacttaaggggcaaaactac 217  Q
     |||||| || |||||||||    
T  21741200 gacttaaaggtcaaaactac 21741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 194
Target Start/End: Complemental strand, 22959385 - 22959194
Alignment:
Q  5 acaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaa 103  Q
    ||||| |||||||||||||||| ||| | ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||||  |  || ||||    
T  22959385 acaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaa 22959286  T
Q  104 aatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||| ||||| |||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  22959285 aattcattc-taaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 22959194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 21565842 - 21566004
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    ||||||||||| | || ||| ||||||||  |||||| |||||||||||||||||||||  || || | ||||| |||||| |||   ||||||||||||    
T  21565842 attctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaatctttccaggttcaa 21565941  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  21565942 tctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 21566004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21502008 - 21501917
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt 93  Q
    |||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  21502008 tgcgacaaatatcgcatttaacccaacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgt 21501917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 21498785 - 21498659
Alignment:
Q  88 aggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    ||||||||||| |||||||  |||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||| | | ||||||||||||||||||    
T  21498785 aggtgtaactctcaaaaatttattcttcaactattccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaac 21498686  T
Q  187 ctctaaggtccaacttaaggggcaaaa 213  Q
     || ||||| |||||||| || |||||    
T  21498685 atccaaggttcaacttaaaggtcaaaa 21498659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 11581068 - 11580906
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 131  Q
    ||||||||| ||||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  11581068 attctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 11580970  T
Q  132 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  11580969 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcttctaagg 11580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 21871426 - 21871225
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||| |||||   | || |    
T  21871426 tgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcac 21871327  T
Q  101 aaaaatccatt-cttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||| |||||| | ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | |||||||||||||||| | |||||||| ||    
T  21871326 aaaagtccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttca 21871228  T
Q  199 act 201  Q
    |||    
T  21871227 act 21871225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 21875706 - 21875505
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||| |||||   | || |    
T  21875706 tgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcac 21875607  T
Q  101 aaaaatccatt-cttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||| |||||| | ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | |||||||||||||||| | |||||||| ||    
T  21875606 aaaagtccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttca 21875508  T
Q  199 act 201  Q
    |||    
T  21875507 act 21875505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 1096765 - 1096934
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||| |||||    
T  1096765 attctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaa 1096864  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1096865 tctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1096934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 21985961 - 21985808
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| ||||||||||||| ||||||| || ||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  21985961 ctgggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 21985863  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  21985862 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 21985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 36154651 - 36154479
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 131  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  36154651 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 36154553  T
Q  132 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
    |||||| |||| | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||  ||||||||    
T  36154552 atctcactctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaacttaa 36154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 19669164 - 19669360
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc- 98  Q
    ||||||||| ||| |||||| ||||| ||| | ||||||||||| | || || | |||||||  |||||||| |||||||||||||||||||  || ||     
T  19669164 tgcgacaagaatcacatttatcctaaacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggtacaattca 19669263  T
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | |||||| |||||| ||    ||||| ||||||||||||||   ||||||| ||||||||||||| | | |||||| ||||||||||| |||||||    
T  19669264 caaaaaattcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactcaaaaacatctaagg 19669360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 194
Target Start/End: Complemental strand, 23390309 - 23390157
Alignment:
Q  44 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 142  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  23390309 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 23390210  T
Q  143 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23390209 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 20026619 - 20026501
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| |  |     
T  20026619 caaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagatcg 20026520  T
Q  199 acttaaggggcaaaactac 217  Q
    ||||||||| |||||||||    
T  20026519 acttaagggtcaaaactac 20026501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 22177901 - 22177792
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||| ||||||| |  ||||||||| |||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||| |||    
T  22177901 cccaaaaatccatttttaaactttctcaggttcaaactcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctagggt 22177803  T
Q  196 ccaacttaagg 206  Q
     ||||||||||    
T  22177802 tcaacttaagg 22177792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 21292717 - 21292635
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||| |||||    
T  21292717 attccaggttcaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggttcaact 21292635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 24529527 - 24529681
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||||| |   | | |||||| |  ||||||  |||  |||||||||||||||||| |    
T  24529527 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcc 24529626  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | ||||||||||| |||| | |||||||    
T  24529627 tacattctttcctaatcattattagacatgttcaggcactgaaaagcatctaagg 24529681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 19660572 - 19660491
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||| |||||||||| | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  19660572 ttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 19660491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 9078338 - 9078402
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||||||||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  9078338 ttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggcactcaaaa 9078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttca 88  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 9078259 - 9078308
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  9078259 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 9078308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 21292785 - 21292736
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  21292785 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 21292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 22075325 - 22075374
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  22075325 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 22119928 - 22119847
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  22119928 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 22119847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 20469702 - 20469654
Alignment:
Q  41 actgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    |||| |||||||||||||||||   |||||||||| |||||||||||||    
T  20469702 actgagtaactcgcgaggcgatccactctactcgctatggcgagttcag 20469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7912 - 7695
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||  ||||||||||||||| ||| | |||||| |||  |||||||||||||||||  |||||||||||| |||||||||||||||||||| |||    
T  7912 tgcgacaaagatcgcatttaacctagcaaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaaccccc 7813  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
    |||||| |||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||| | |||||| ||||||||||| |||||||| |||    
T  7812 aaaaattcattcttaaactattctaggttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaaaacatctaaggttcaa 7713  T
Q  200 cttaaggggcaaaactac 217  Q
    |||||||  |||||||||    
T  7712 cttaaggatcaaaactac 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6878 - 7092
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  6878 tgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattcc 6977  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| ||    
T  6978 caaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttca 7077  T
Q  199 acttaaggggcaaaa 213  Q
    |||||| || |||||    
T  7078 acttaaaggtcaaaa 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14258 - 14472
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  14258 tgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattcc 14357  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| ||    
T  14358 caaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttca 14457  T
Q  199 acttaaggggcaaaa 213  Q
    |||||| || |||||    
T  14458 acttaaaggtcaaaa 14472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 37 - 217
Target Start/End: Complemental strand, 2051018 - 2050839
Alignment:
Q  37 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctc 136  Q
    |||||||||| ||||| ||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2051018 tgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcccaaaaatccattcttaaactattc--ggttcaatctc 2050921  T
Q  137 attctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    | |||||||||||| ||||||||||||||| | ||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  2050920 aatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacatctaaggttcaacttaagggtcaaaactac 2050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 52523550 - 52523345
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52523550 attctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactgttccaggttcaa 52523451  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 231  Q
    | |||  ||||||||||| ||||| ||||||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  52523450 tatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaatcatctaaataccaacttaaggaccaaa---actacgaaatcatgtt 52523354  T
Q  232 gactctctg 240  Q
    |||||||||    
T  52523353 gactctctg 52523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 324515 - 324706
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 114  Q
    ||||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  324515 catttaacctaacaaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgcaactcccaaaaattcattctt 324614  T
Q  115 aaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaag 205  Q
    |||||||||   |||||||||||||||| ||||||| |||||||||||  |||||| ||||||||||||||| | ||||| || |||||||||    
T  324615 aaactattctcagttcaatctcattctacaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaagttcaacttaag 324706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 14234770 - 14234969
Alignment:
Q  15 catttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 113  Q
    |||||||||||| ||| | ||||||||||||| || || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14234770 catttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcccaaaaattcattct 14234869  T
Q  114 taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 212  Q
    | ||||||| | |||||||||||| |||| ||||||| |||||||| |||| | | |||||||||||||||||  |||||||| |||||||| || ||||    
T  14234870 t-aactatttcgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaaaaaaatctaaggttcaacttaaaggtcaaa 14234968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 15471190 - 15471391
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||||| |||||||||||||| |  || |||||||| ||||||||||||||||||||||||||||||||||||     
T  15471190 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 15471289  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    | ||||| | |||||||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | ||||||| |||||||||| |||||||| ||    
T  15471290 c-aaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaacatctaaggttca 15471388  T
Q  199 act 201  Q
    |||    
T  15471389 act 15471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 1465249 - 1465047
Alignment:
Q  17 tttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctta 115  Q
    |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||| |||||||||| ||||| || |||| | ||||||    
T  1465249 tttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggtgcaactcacacaaattcgttctta 1465150  T
Q  116 aactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 213  Q
    || ||||||||||||||||||| |||| |||||||  ||||||| ||  |||| ||||||||||||||||||| |||||||| | |||||| || |||||    
T  1465149 aattattccaggttcaatctcaatctacaatctttcataatcatcatcataca-agttcaggcactcaaaaacatctaaggttcgacttaaaggtcaaaa 1465051  T
Q  214 ctac 217  Q
    ||||    
T  1465050 ctac 1465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 17248109 - 17247947
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  17248109 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 17248010  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  17248009 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 17247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 42386710 - 42386894
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaa 132  Q
    |||||||| |||| ||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||| |||||||||    
T  42386710 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattctt-aactatttcaggttcaa 42386808  T
Q  133 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    || || |||| | ||||  |||||||||||||  ||| ||||| ||||||| ||||  ||||||| |||||||| || |||||||||    
T  42386809 tcacagtctaaagtcttgcctaatcattattatgcat-gttcatgcactcataaacaactaaggttcaacttaaaggtcaaaactac 42386894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 53070520 - 53070360
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 132  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  53070520 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 53070423  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  53070422 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 53070360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 12934166 - 12933971
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| ||| ||||||||      |||||||||||||  | |||| |||||||||||||||||||||  |  ||     
T  12934166 tgcgacaaagatcgcatttaacctaaacaaggaagtctgtaacacaagtactcgcgaggcgagagtctctgctcgccatggcgagttcaggttcagttca 12934067  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||| | |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  12934066 caaaatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 12933971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 16097595 - 16097782
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||| |||  |||| ||| ||||||| | || ||||||||||||  |||||||||| |||||||||||||||||  || ||     
T  16097595 tgcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaattca 16097694  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    ||||||| |||||| |||   || ||||||||||||||||||  ||||||| ||||| ||||||| | | |||||| |||||||||||    
T  16097695 caaaaattcattctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaaaaac 16097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 32307983 - 32308128
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  |||||||| || ||||| ||| | |||| |||||||||||||||||  ||||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcccaaaattc-attct-aaagtcttcctaggttcaatctcattctccaatc 32308080  T
Q  148 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  32308081 tttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 606049 - 605941
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||  ||  ||||||||||||| | |  ||||||||||||||| | ||||||||     
T  606049 cccaaaaatccatttttaaacttttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaatcatctaaggtt 605950  T
Q  197 caacttaag 205  Q
    |||||||||    
T  605949 caacttaag 605941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 40213535 - 40213392
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||||||| | ||||||  ||   |||||||||||||||||| ||    
T  40213535 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcct 40213436  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  40213435 acattctttcctaatcattattagacatgttcaggcactcaaaa 40213392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 37251005 - 37250932
Alignment:
Q  17 tttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  37251005 tttaacctaacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 49667890 - 49667754
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||| | | |||||| |||   |||||||||||||||||||||  |||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatct 49667791  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaa 184  Q
    || ||||||||||||| | | |||||||| |||||||    
T  49667790 ttcctaatcattattagacatgttcaggcgctcaaaa 49667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12171960 - 12171869
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||||||| |||||||||||||||| ||| | ||||||||||| | ||  |||||||||||  |||||||||||||||||| |||||||||    
T  12171960 tgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 9513228 - 9513370
Alignment:
Q  54 cgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttc 152  Q
    ||||||||  |||||| |||||||||| |||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| |    
T  9513228 cgaggcgagagcctctgctcgccatggtgagttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcc 9513327  T
Q  153 taatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||| | | |||||||||||||||| | |||||||    
T  9513328 taatcattattagacatgttcaggcactcaaaagcatctaagg 9513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 9521203 - 9521345
Alignment:
Q  54 cgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttc 152  Q
    ||||||||  |||||| |||||||||| |||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| |    
T  9521203 cgaggcgagagcctctgctcgccatggtgagttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcc 9521302  T
Q  153 taatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||| | | |||||||||||||||| | |||||||    
T  9521303 taatcattattagacatgttcaggcactcaaaagcatctaagg 9521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 14572873 - 14573037
Alignment:
Q  20 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaa-aatccattcttaaac 118  Q
    |||||||||| | | |||||  || ||| |||||||||||||  ||||||||||||||||||||||||||||   | | |||||   | |||||| |  |    
T  14572873 aacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtc 14572972  T
Q  119 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 183  Q
    | |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||    
T  14572973 t-ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 14573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 23275106 - 23275213
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  23275106 caaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 23275204  T
Q  198 aacttaagg 206  Q
    |||||||||    
T  23275205 aacttaagg 23275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 23412929 - 23412814
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||| | |||||| |||||||| |||| || |||  ||||||||| |||  |||| ||||||||||||||| | |||||||| |    
T  23412929 caaaaatccatttttaaactttcccaggtccaatctcaatctaaaaacttgcctaatcatttttatacata-ttcaggcactcaaaatcatctaaggttc 23412831  T
Q  198 aacttaaggggcaaaac 214  Q
    |||||||||| ||||||    
T  23412830 aacttaagggacaaaac 23412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 25476199 - 25476046
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | ||| |||  | |||||| |||   |||||||||| ||||||||||    
T  25476199 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcgatctcattct 25476100  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | |||||  |||||||||||| | | ||||||| |||||||||| |||||||    
T  25476099 acattctttcataatcattattagacatgttcaggtactcaaaaacatctaagg 25476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 43927543 - 43927652
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| ||||||| | |||||||||| |||| |||| || ||| |||||||||||||| | | |||||||||||||||| | ||||| ||     
T  43927543 cccaaaaatccatttttaaactttcccaggttcaaactcaatctaaaaacttgtctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 43927642  T
Q  197 caacttaagg 206  Q
    | ||||||||    
T  43927643 cgacttaagg 43927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 49389378 - 49389305
Alignment:
Q  122 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  49389378 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 49389305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 1644489 - 1644352
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattc-caggttcaatctcattctagaatc 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||| | ||| ||||||||||||||||||  ||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aaagtcttctcaggttcaatctcattctctaatc 1644392  T
Q  148 ttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    ||| ||||||||||| | | | ||||||||||||||||||    
T  1644391 tttcctaatcattatcagacatgttcaggcactcaaaaac 1644352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 14501564 - 14501677
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14501564 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaccttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14501662  T
Q  198 aacttaaggggcaaa 212  Q
    |||||||||| ||||    
T  14501663 aacttaagggacaaa 14501677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 11424569 - 11424424
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatct 148  Q
    ||||||||||||  ||||||||||||| ||||||||||||||   | | | |||| |  |||||| || || |||||||||||||||||||||| | | |    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatct-ttccaggttcaatctcattctacattat 11424471  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || ||||||||||||| | | |||||||||||||||| | |||||||    
T  11424470 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 11424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 14179708 - 14179789
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||| |||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 14179789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 12378359 - 12378457
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || | |  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  12378359 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacatgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 12378457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 45797608 - 45797721
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||| || |    
T  45797608 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaagttc 45797706  T
Q  198 aacttaaggggcaaa 212  Q
    |||||||||| ||||    
T  45797707 aacttaagggacaaa 45797721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 18438920 - 18438994
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||||| || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18438920 ttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 20698183 - 20698101
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  20698183 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 20698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 26687193 - 26687347
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  26687193 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 26687292  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  26687293 tacattctttcctaatcattattagacatgtttaggcactcaaaagcatctaagg 26687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 14973161 - 14973314
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| ||| |||||||||  |||||| |||||| ||||||||||||||   | | |||||| | | |||| |||   || | |||| |||||||||||    
T  14973161 ctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttttctggtttaatctcattct 14973260  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  14973261 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 14973314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 37250869 - 37250804
Alignment:
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  37250869 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 37250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 16104168 - 16104240
Alignment:
Q  123 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||| ||||||||  ||||||| ||||||||||||| | | ||||||||||||| |||| |||||||    
T  16104168 ccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactcagaaacatctaagg 16104240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 14576568 - 14576505
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 183  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| | | |||||||||||||||    
T  14576568 ttccaggttcaatgtcattctacattcttttctaatcataattagacatgttcaggcactcaaa 14576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 17488243 - 17488306
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 183  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17488243 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17488306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 17499725 - 17499788
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 183  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 22110033 - 22109926
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| | ||||  |  ||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||||| ||||| ||     
T  22110033 cccaaaaatccattttcaaacactcacaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaaacatctaaagtt 22109934  T
Q  197 caacttaa 204  Q
    ||||||||    
T  22109933 caacttaa 22109926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 606173 - 606135
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttca 88  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  606173 ctcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 12340138 - 12340219
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  12340138 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 12340219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 13210133 - 13210096
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttc 87  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 20698251 - 20698202
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  20698251 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20698202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 13442660 - 13442724
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  13442660 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 22110156 - 22110116
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 23083176 - 23083132
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagtt 86  Q
    |||||| | |||||||||||  |||||||||||||||||||||||    
T  23083176 ctgggtcattcgcgaggcgagagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15099615 - 15099833
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||| ||||||||||  |||| ||||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||     
T  15099615 tgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 15099714  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||||| |    
T  15099715 caaaaattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaaggttc 15099813  T
Q  198 aacttaaggggcaaaactac 217  Q
     |||||| || |||||||||    
T  15099814 gacttaaaggtcaaaactac 15099833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39706143 - 39705930
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||||| |||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||     
T  39706143 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 39706044  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    | ||||| | |||||||||||||||||||||||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| ||    
T  39706043 c-aaaattcgttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 39705945  T
Q  199 acttaaggggcaaaa 213  Q
    |||||| || |||||    
T  39705944 acttaaaggtcaaaa 39705930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15190582 - 15190787
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||||||| ||| |||||| ||    
T  15190582 tgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagtacagatgtaacgcc 15190681  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||| | | |||||||||||||||||| |||||||| |     
T  15190682 caaaaatccattcttaaactattccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcg 15190781  T
Q  199 acttaa 204  Q
    ||||||    
T  15190782 acttaa 15190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 52243016 - 52242811
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  52243016 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaacaatgcattcttaaactattccaggttcaa 52242917  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 231  Q
    |||||||||||||||||| || |||||||||| | | |||||||||||| ||| | |||||   ||||||||| |  ||||   ||||||||| |||||     
T  52242916 tctcattctagaatctttcctgatcattattatacatgttcaggcactcgaaatcatctaaataccaacttaaagatcaaa---actacgaaatcatgtt 52242820  T
Q  232 gactctctg 240  Q
    |||||||||    
T  52242819 gactctctg 52242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 15464752 - 15464567
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15464752 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaatccattcttaaactatttcaggttcaa 15464653  T
Q  133 tctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    ||||| |||| ||||||| |||||||||||  |||||| ||||||||||||||| | |||||    ||||||||||| |||||||||    
T  15464652 tctcaatctaaaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaatatcaacttaagggtcaaaactac 15464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 64 - 217
Target Start/End: Complemental strand, 43198380 - 43198226
Alignment:
Q  64 gcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt 163  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaatcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattatt 43198281  T
Q  164 acata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    ||| | |||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  43198280 acacatgttcaggcactcaaaaacatctaaggtttaacttaagggtcaaaactac 43198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 13844854 - 13845009
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  13844854 ctcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaatccattcttaaactattccaggttaaatcttgatctagaatctt 13844953  T
Q  150 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
    |||||||||| |||| | | |||||| ||||||||||| |||||||| ||||||||    
T  13844954 ttctaatcataattagacatgttcagacactcaaaaacatctaaggttcaacttaa 13845009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 8846639 - 8846834
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc- 98  Q
    ||||||||  |||||||||||| |||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||||| ||||| |||||     
T  8846639 tgcgacaaagatcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggtgcaactca 8846738  T
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 193  Q
    | |||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||| |||||||||| ||||||    
T  8846739 caaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaaaaacatctaag 8846834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 44928746 - 44928592
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||||||| |||   | |||||||  | |||||| |||   ||||||||||||    
T  44928746 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaa 44928647  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    |||||||||| | ||||| ||||||||||||| ||| ||||||||||||||||||    
T  44928646 tctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaac 44928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 15868391 - 15868273
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||| ||| ||||||| | ||||||||||||||| |||| || |||| |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  15868391 caaaaatctatttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 15868293  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||||||||| |||||||||    
T  15868292 aacttaagggacaaaactac 15868273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 12774264 - 12774458
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| |||||||||||||||| ||| | | ||||||||      |||||||||||||  |||||| |||||||||||||||||||||  |  ||     
T  12774264 tgcgacaaggatcgcatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttca 12774363  T
Q  100 caaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||| || ||||| ||  | | ||||||||||||||||||||  ||||||||||||||||||||| | | |||||||||||||||||| |||||||    
T  12774364 caaaattc-attct-aacgtctctccaggttcaatctcattctccaatcttttctaatcattattagacatgttcaggcactcaaaaacatctaagg 12774458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 21815124 - 21814964
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 132  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21815124 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815027  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815026 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21814964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 21815453 - 21815293
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 132  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || ||||||||||     
T  21815453 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815356  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | |||||||| | | ||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815355 tatcattctaaattatttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 21818546 - 21818386
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 132  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21818546 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21818449  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21818448 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 32851816 - 32851929
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  32851816 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 32851914  T
Q  198 aacttaaggggcaaa 212  Q
    |||||||||| ||||    
T  32851915 aacttaagggacaaa 32851929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 13532 - 13415
Alignment:
Q  98 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  13532 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 13433  T
Q  196 ccaacttaaggggcaaaa 213  Q
     ||||||||||| |||||    
T  13432 tcaacttaagggtcaaaa 13415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 16597031 - 16597106
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 16597106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 3097017 - 3097093
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||| ||||| ||||||||    
T  3097017 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcgaaaacatctaaggt 3097093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 15091203 - 15091326
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | ||||||  | |||||| |||   ||||||||||||||||||||    
T  15091203 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattc 15091302  T
Q  141 tagaatcttttctaatcattatta 164  Q
    || | ||||| ||||||| |||||    
T  15091303 tacattctttcctaatcaatatta 15091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 12287891 - 12287825
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  12287891 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 12287825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 14038955 - 14039109
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||| |||   | | |||||| |  |||||| |||   ||| ||||||||||||||||    
T  14038955 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattc 14039054  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| | ||||||||||| | | |||||||||||||||| | |||||||    
T  14039055 tacattctttccaaatcattattagacatgttcaggcactcaaaagcatctaagg 14039109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 44102508 - 44102566
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||    
T  44102508 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 44102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 53081854 - 53081789
Alignment:
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| || |||   ||||||||||||    
T  53081854 ccaaaaatccatttttaaacttttccaggttcaatctcaatctaaaaacttgcttaatcattatta 53081789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 13656 - 13616
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  13656 actcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 12903131 - 12903195
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 183  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  12903131 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 12903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 14053049 - 14052967
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  14053049 attccaagttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 14052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 7089185 - 7089232
Alignment:
Q  44 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  7089185 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 16239728 - 16239653
Alignment:
Q  121 ttccaggttcaatctcattctaga-atcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||||||| |  ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16239728 ttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 17047885 - 17047838
Alignment:
Q  44 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  17047885 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 6190819 - 6190893
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 6190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 7089251 - 7089313
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||    
T  7089251 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactca 7089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 3096949 - 3096998
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  3096949 ctgggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggt 3096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 7799003 - 7799052
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  7799003 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 7799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 12903063 - 12903112
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| ||||||||||||   ||||||||||||| ||||||||||||||    
T  12903063 ctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggt 12903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 15552199 - 15552280
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | | |||||| |||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaact 15552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 24029127 - 24029208
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||||| ||| | |||||  |||||| ||||| | | ||||||||||||||| || |||||||| |||||    
T  24029127 ttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacatctaaggttcaact 24029208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 13220 - 13407
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 114  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  13220 catttaacctaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaaaattcattctt 13319  T
Q  115 aaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  13320 aaactattccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15686 - 15481
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||| |||||||| ||| ||| | ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  15686 tgcgacaaagatcacatttaacataaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaattcc 15587  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
     ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| ||    
T  15586 gaaaaatccattcttaaactattccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttca 15487  T
Q  199 acttaa 204  Q
    ||||||    
T  15486 acttaa 15481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 50 - 201
Target Start/End: Complemental strand, 43590 - 43438
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43590 ctcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 43491  T
Q  150 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  43490 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 43438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 201
Target Start/End: Complemental strand, 47510 - 47358
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47510 ctcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 47411  T
Q  150 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  47410 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 47358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 39834107 - 39834315
Alignment:
Q  11 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 109  Q
    |||||||||||| ||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| |||| || ||    
T  39834107 atcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattca 39834206  T
Q  110 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 207  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||  |||| |||| |||||||||||||| |||||||| | |||||| ||    
T  39834207 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcataca-agtttaggcactcaaaaacatctaaggttcgacttaaagg 39834305  T
Q  208 gcaaaactac 217  Q
     |||||||||    
T  39834306 tcaaaactac 39834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 6520644 - 6520847
Alignment:
Q  11 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 110  Q
    ||||||||||||||||||||| ||||||||| |||| |  | ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  6520644 atcgcatttaacctaacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactctcaaaaatccat 6520743  T
Q  111 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 209  Q
    |||||||||||| |||||||| ||| | |||  ||||||| ||||| ||||||| | | |||||| ||||||||||| |||||||| |||||||| || |    
T  6520744 tcttaaactatttcaggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacatctaaggttcaacttaaaggtc 6520843  T
Q  210 aaaa 213  Q
    ||||    
T  6520844 aaaa 6520847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 38855090 - 38854893
Alignment:
Q  17 tttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctta 115  Q
    |||||||||| ||| | |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  38855090 tttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc-aaaattcgttctta 38854992  T
Q  116 aactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 213  Q
    |||||||||||||| ||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| || |||||    
T  38854991 aactattccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaaa 38854893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 21285874 - 21285989
Alignment:
Q  11 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 110  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||    
T  21285874 atcgcatttaacctaacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggtgtaactcccaaaaattcat 21285973  T
Q  111 tcttaaactattccag 126  Q
    ||||||||||||||||    
T  21285974 tcttaaactattccag 21285989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 21673970 - 21674157
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||| ||||| ||| | ||||||||||  |  || ||||||||||| |||||||||||||||||||||||||||||| |||||     
T  21673970 tgcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 21674069  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    |||| || |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  21674070 caaatattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 21674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 23760695 - 23760509
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||  |||||||||| |||||||| | ||| ||||||| |  || ||||||||||| |||||||||||||| |||| ||||||||| ||||||||    
T  23760695 tgcgacaaagatcgcatttatcctaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaagttcaggtataactccc 23760596  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    | || | | |||||||||||||||||||||||||||| | |  ||| ||| ||||||||||||| | | ||||||| ||||||||||    
T  23760595 acaagttcgttcttaaactattccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaaaac 23760509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 19801234 - 19801101
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| |||||  | |||    
T  19801234 actcgcgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtct 19801135  T
Q  149 tttctaatcattattacata-gttcaggcactca 181  Q
    || ||||||||||||| | | |||||||||||||    
T  19801134 ttcctaatcattattagacatgttcaggcactca 19801101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 41598482 - 41598644
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    ||||||||||| ||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  41598482 attctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 41598581  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||| | |||||  |||||||||||| | | |||||||||||||||| | |||||||    
T  41598582 tctcattctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaagg 41598644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 26355554 - 26355367
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||| ||| ||| | ||||||||||| | || |||| |||||||  |||||||||||||||||| |||||||||  || ||     
T  26355554 tgcgacaaagatcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattca 26355455  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    ||||||| |||||| ||    ||||||||||||||||| |||  ||||| | ||||||||||||| | | ||||||||||||||||||    
T  26355454 caaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaaaaac 26355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 13507765 - 13507657
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13507765 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13507667  T
Q  198 aacttaaggg 207  Q
    ||||||||||    
T  13507666 aacttaaggg 13507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 13597297 - 13597189
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13597297 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13597199  T
Q  198 aacttaaggg 207  Q
    ||||||||||    
T  13597198 aacttaaggg 13597189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 20499024 - 20499143
Alignment:
Q  99 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcc 197  Q
    ||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| || |    
T  20499024 ccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaatcatctaaagttc 20499123  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||| ||||| |||||||||    
T  20499124 aactcaagggtcaaaactac 20499143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 22875372 - 22875494
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||| |||| ||||||||||||||||   | |||||||  | |||||| |||   |||||||||||| ||| ||||    
T  22875372 ctgggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttct 22875471  T
Q  142 agaatcttttctaatcattatta 164  Q
    | ||||||| |||||||||||||    
T  22875472 acaatctttcctaatcattatta 22875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 20536514 - 20536675
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |    
T  20536514 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcc 20536613  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    || | ||||| ||||||||||| | | | |||||||||||||||| | |||||||| |||||    
T  20536614 tacattctttcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttcaact 20536675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 21491382 - 21491462
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  21491382 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 21491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 23406665 - 23406841
Alignment:
Q  20 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaac 118  Q
    |||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||     
T  23406665 aacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 23406764  T
Q  119 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
      |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23406765 ctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 5866009 - 5865931
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5866009 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5865931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 6759563 - 6759717
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| |||   ||||| ||||||||||||||    
T  6759563 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattc 6759662  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||    
T  6759663 tacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaagg 6759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 17141302 - 17141380
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  17141302 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 17141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 45130767 - 45130691
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  45130767 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 45130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 17266674 - 17266565
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||| ||||||| |   ||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||| ||    
T  17266674 cccaaaaatccatttttaaactttcgtaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatctaaagt 17266576  T
Q  196 ccaacttaagg 206  Q
     | ||||||||    
T  17266575 tcgacttaagg 17266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 18878972 - 18878898
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18878972 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18878898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 983084 - 982975
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||| ||||||| || || | | |||||| ||||||||| | ||||| ||     
T  983084 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaactttcctaatcactaatatacatgttcagacactcaaaatcatctaaagtt 982985  T
Q  197 caacttaagg 206  Q
    ||||||||||    
T  982984 caacttaagg 982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 17439187 - 17439100
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 184  Q
    |||||||||||||| ||||||| | |||||||||||| || |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  17439187 cccaaaaatccatttttaaactttcccaggttcaatcccaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaa 17439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 21286656 - 21286724
Alignment:
Q  169 gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 240  Q
    ||||||||||| |||||| |||||||| ||||||||||| ||||   ||||||||| ||||| |||||||||    
T  21286656 gttcaggcacttaaaaacatctaaggttcaacttaagggtcaaa---actacgaaatcatgttgactctctg 21286724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 21918745 - 21918664
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||| | ||| | ||||||||||||||||||| | | |||||||||||| ||| | |||||||| |||||    
T  21918745 ttccaggttcaatctcttcctacattcttttctaatcattattagacatgttcaggcactccaaagcatctaaggttcaact 21918664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 24353463 - 24353550
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 184  Q
    ||||||||||||||  |||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  24353463 cccaaaaatccatttataaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 24353550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 21415049 - 21414887
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 133  Q
    |||||||| |||  ||||||||||||||  | |||||||||||||||||||||  |||  ||  | ||  | |||||| | || ||| |||  |||||||    
T  21415049 ttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattttgaagctaatccgagttcaat 21414950  T
Q  134 ctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||| ||||||| ||||||||||   | |||  ||||||||||||||||| ||||||||    
T  21414949 ctcattctacaatctttcctaatcattagtgtgcat-cttcaggcactcaaaaacatctaaggt 21414887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 7373135 - 7373209
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  7373135 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 7373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 18818145 - 18818071
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18818145 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18818071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 21918808 - 21918766
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 22627125 - 22627195
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22627125 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 31971629 - 31971711
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||| ||||| | |||||||| |||||    
T  31971629 attccaggttcaatctcatcctacatcctttcctaatcattattagacatgttcaggcacacaaaagcatctaaggttcaact 31971711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 18818224 - 18818175
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  18818224 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 18818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 21255605 - 21255686
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||  ||||||||||| | |||||||| |||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaact 21255686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 37116787 - 37116874
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 184  Q
    |||||||||||||| ||| ||| |  |||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  37116787 cccaaaaatccatttttatactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 37116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 25362887 - 25362843
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  25362887 attccaggttcaatctcatcctacattctttcctaatcattatta 25362843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 23708441 - 23708257
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  23708441 attctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-gattcaa 23708343  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    ||||| ||||  | |||| |||||||||| |||||| |||||| ||||||||||| ||||| |  ||||| ||||| |||||||||    
T  23708342 tctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacatctaaagatcaactcaagggtcaaaactac 23708257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 25176140 - 25176309
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    |||||||||||| | |  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  25176140 attctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactctcaaaaatctgttcttaaactattccaggttcaa 25176239  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||| |||  || |||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  25176240 tctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 25176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 23076726 - 23076910
Alignment:
Q  20 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 119  Q
    |||||||||| | | |||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||   | | |||||  | |||||| || ||    
T  23076726 aacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattctaaatct 23076825  T
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
     |||||||| ||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||  ||||||||    
T  23076826 -ttccaggtccaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggatcaacttaa 23076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 23660307 - 23660482
Alignment:
Q  20 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 119  Q
    |||||||||| | | |||||  |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | ||| |||  | |||||| |||      
T  23660307 aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatc 23660406  T
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
     |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23660407 tttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 298629 - 298476
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| || |  |||||| || || |||||||||||||||||| |    
T  298629 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatct-ttccaggttcaatctcatcc 298531  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  298530 tatattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 23207559 - 23207634
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||||| |  ||||||||||||| ||||||| ||||||  |||||||||||| ||||||||||||||    
T  23207559 catttaacctaacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 28406244 - 28406429
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| |||||||||||||||| ||| | ||| ||||||      ||| |||||||||  ||||||||||||||||||||||||||||  |  ||     
T  28406244 tgcgacaaggatcgcatttaacctaaacaaggcattatgtaacacaagtacttgcgaggcgagagcctctactcgccatggcgagttcaggttcagttca 28406343  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    ||||| |  ||||| |||   || ||||||||||||||||||  ||||||| ||||| ||||||| | | ||||||||||||||||    
T  28406344 caaaattttattctaaaatctttacaggttcaatctcattctccaatctttcctaattattattagacatgttcaggcactcaaaa 28406429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 23071695 - 23071617
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  23071695 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 23071617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 18786566 - 18786446
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||| || || |   |||||||||||||||| | ||||| ||     
T  18786566 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcaataatatacgtgttcaggcactcaaaatcatctaaagtt 18786467  T
Q  197 caacttaaggggcaaaactac 217  Q
    ||||||||||| |||||||||    
T  18786466 caacttaagggtcaaaactac 18786446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 22337422 - 22337544
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt-gtaactcccaaaaatccattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  ||||||||||||| |||||| |||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  22337422 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 22337520  T
Q  141 tagaatcttttctaatcattatta 164  Q
    || | ||||| |||||||||||||    
T  22337521 tacattctttcctaatcattatta 22337544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 22133948 - 22133878
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22133948 aggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22133878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 22412817 - 22412733
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 181  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  ||||| |||||||||||||    
T  22412817 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatcatacat-gttcaggcactca 22412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 22730968 - 22730894
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22730968 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22730894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 22737911 - 22737841
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||| ||| | ||||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  22737911 aggttcaatctcatcctacattctttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 22737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 23654146 - 23654064
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||| |||||| | |||||||| |||||    
T  23654146 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttcaact 23654064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  37 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    |||||||||| ||||| ||||||||  |||||||||||| ||||||||||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 23207717 - 23207801
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  23207717 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 23207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 23286235 - 23286317
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  23286235 attccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 23286317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 27753961 - 27754035
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  27753961 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttgaggcactcaaaagcatctaagg 27754035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 32451744 - 32451590
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| ||  | ||||||  ||   ||||| |||||||||||| |    
T  32451744 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcc 32451645  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  32451644 tacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 32451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 37863 - 37787
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttc-taatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| | | |||||||||||||||| | ||||||||    
T  37863 attccaggttcaatctcatcctaca-tcttttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 20520014 - 20519957
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||| || ||||||||||||||  |||||||| ||| ||||||| ||||||    
T  20520014 attctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 20309479 - 20309523
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  20309479 attccaggttcaatctcatcctacattctttcctaatcattatta 20309523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 20519874 - 20519790
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    |||||||||||||| || |||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  20519874 cccaaaaatccattttttaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 20519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 31756232 - 31756268
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagtt 86  Q
    ||||||||||||  |||||||||||||||||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 130172 - 130359
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||| ||||| ||| | ||| ||||||| | || ||||||||||||  |||||| |||||||||||||||| |||||||| |||    
T  130172 tgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtttaggtgtaattcc 130271  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || | | ||||||||||||||||||    
T  130272 caaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaac 130359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 60536 - 60479
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  60536 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 60396 - 60312
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  60396 cccaaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 60312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 3197 - 3392
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | ||||||||||| |  || || |||||||| ||||||||||||||||||||||||||||| |||||||    
T  3197 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataactcc 3296  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || || | | |||||||||||||||||||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  3297 cacaagttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 3392  T

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Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28194304 - 28194086
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||||| ||||||||  |||| ||| ||||| |||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||||     
T  28194304 tgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaactca 28194205  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||| || ||||||||||||||| |||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || ||||| |    
T  28194204 caaagattcattcttaaactatttcaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatccaaggttc 28194106  T
Q  198 aacttaaggggcaaaactac 217  Q
     |||||| || |||||||||    
T  28194105 gacttaaaggtcaaaactac 28194086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22921723 - 22921521
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||||||||||| || ||| | ||||||||||| || |  |||||||||||  ||||||||||||||||||||||||| || ||||||     
T  22921723 tgcgacaaagatcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagtctaactct 22921624  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    ||||||| | ||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| ||    
T  22921623 caaaaattcgttcttaaactattcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 22921524  T
Q  199 act 201  Q
    |||    
T  22921523 act 22921521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 52927836 - 52927642
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||  ||||||||||||||||||| | |||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||| |||||       
T  52927836 tgcgacaaagatcgcatttaacctaacaaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtctaacttta 52927737  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||| |||||  |||   |||||||||||||||||||||  |||||||  |||||||||||| | | |||||||||||||||||| |||||||    
T  52927736 aaaaattcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaaaacatctaagg 52927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 35981542 - 35981325
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||| |||||||||| ||| | ||||||||||| | || ||||||||||||  |||||||||| |||||||||||||||||| |||||     
T  35981542 tgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactca 35981443  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    || |||| | |||||||||||| ||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || ||||| |    
T  35981442 cataaattcgttcttaaactatcccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatc-aaggttc 35981345  T
Q  198 aacttaaggggcaaaactac 217  Q
     |||||| || |||||||||    
T  35981344 gacttaaaggtcaaaactac 35981325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 33681284 - 33681469
Alignment:
Q  11 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 109  Q
    |||||||||||| ||| ||| | | ||||||||||||||| |||||||||||  |||||| |||||||||||||||||||||| ||||| ||||||| ||    
T  33681284 atcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattca 33681383  T
Q  110 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 194  Q
    |||| |||   |||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||| |||||||||| |||||||    
T  33681384 ttctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacata-ttcaggaactcaaaaacatctaagg 33681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20637115 - 20637279
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||||| ||||||||||  |||| ||||||||||||  || ||||||||||||  ||||||||||||||||||||||||||||| |||||     
T  20637115 tgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 20637214  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||| | |||||||||||||||||||||||||| | |||  ||||||| |||||||| ||||    
T  20637215 caaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcatta 20637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 43697712 - 43697830
Alignment:
Q  87 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 185  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | || | | |||||||||||||||||    
T  43697712 caggtgtaactcccgaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaa 43697811  T
Q  186 cctctaaggtccaacttaa 204  Q
    | |||||||| ||||||||    
T  43697812 catctaaggttcaacttaa 43697830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 20248542 - 20248734
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| ||||||||||||||||  |||  ||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||  |  ||     
T  20248542 tgcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttcaggttcagttca 20248641  T
Q  100 caaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctcta 191  Q
    ||||||| ||||| |||| | | ||||||||||||||||||||   |||||| ||||||||||||| | | |||||||||||||||||| ||||    
T  20248642 caaaaattcattc-taaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaacatcta 20248734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 22237905 - 22238089
Alignment:
Q  11 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 109  Q
    |||||||||||||||| ||| | ||||||||||| |  || ||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||| || |    
T  22237905 atcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaagtgcaactcacaaaattc-a 22238003  T
Q  110 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||  |||   ||||||||| |||||||||||  ||||||| |||| |||||||| | | |||||||||||||||||  |||||||    
T  22238004 ttccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaaaatatctaagg 22238089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 194
Target Start/End: Original strand, 433312 - 433467
Alignment:
Q  40 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcatt 139  Q
    |||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   |||||||||||||||||||    
T  433312 aactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcatt 433411  T
Q  140 ctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||| | ||||| |||||||||| || | | |||||| ||||||||| | |||||||    
T  433412 ctacattctttcctaatcattaatagacatgttcagacactcaaaagcatctaagg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 21754350 - 21754495
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||| | |||| |||||||||||| ||||  ||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aaagtcttcccaggttcaatctctttctccaatc 21754447  T
Q  148 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  21754448 tttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 21754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 50210027 - 50209885
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  50210027 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 50209929  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaa 183  Q
    || | ||||| ||||||||||||| | | |||||||||||||||    
T  50209928 tacattctttcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 21861250 - 21861132
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcca 198  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| |  ||    
T  21861250 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcagaatcatctaaagatca 21861151  T
Q  199 acttaaggggcaaaactac 217  Q
    ||||||||| |||||||||    
T  21861150 acttaagggtcaaaactac 21861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 26065238 - 26065295
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  26065238 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 34510087 - 34510239
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| ||||| |||||||  |||||| |||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  34510087 ctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 34510186  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 193  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  34510187 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 34510239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 21895989 - 21895870
Alignment:
Q  100 caaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| || ||||| | ||||||||||||||| |||| || |||| ||||||||||||| | | ||||||||||||| || | ||||| |  |    
T  21895989 caaaaatccattttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactcataatcatctaaagatc 21895890  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||||||||| |||||||||    
T  21895889 aacttaagggtcaaaactac 21895870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 16759091 - 16759209
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 198  Q
    |||||||||||  ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| |   ||| |||||||||||||| |||||||| |     
T  16759091 caaaaatccatctttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacgtgtttaggcactcaaaaacatctaaggttcg 16759190  T
Q  199 acttaaggggcaaaactac 217  Q
    ||||||||| |||||||||    
T  16759191 acttaagggtcaaaactac 16759209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 22355921 - 22355839
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22355921 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 22357607 - 22357525
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22357607 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 21342513 - 21342631
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21342513 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21342611  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||||||||| |||||||||    
T  21342612 aacttaagggtcaaaactac 21342631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 21347378 - 21347496
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21347378 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21347476  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||||||||| |||||||||    
T  21347477 aacttaagggtcaaaactac 21347496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 22532577 - 22532729
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 142  Q
    ||||| |||||||||||||  |||||| ||| || ||||||||||| ||   | | |||||| | ||||||  ||   |||||||||||||||||| |||    
T  22532577 tgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatccta 22532676  T
Q  143 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22532677 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 26065357 - 26065441
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  26065357 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 26065441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 49261606 - 49261690
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 84  Q
    ||||||||  ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  ||||||| |||||||||||||    
T  49261606 tgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 27250476 - 27250394
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  27250476 attccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 27250394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 35260898 - 35260852
Alignment:
Q  37 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 83  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  35260898 tgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 50687031 - 50687097
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  50687031 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 50687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 16367968 - 16367881
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 184  Q
    |||||||||||||  ||||||| ||||||||||| ||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  16367968 cccaaaaatccatctttaaacttttccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 16367881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 20918990 - 20919051
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  20918990 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 20919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 16758949 - 16759005
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    ||||||||||| || ||||||||||| || |||||||||| || |||||||||||||    
T  16758949 attctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 35260813 - 35260729
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 181  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  35260813 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 35260729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 20846966 - 20846891
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||||| ||| | ||||  ||||||||||||| | | |||||||||||||||| | |||||||    
T  20846966 attccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaagcatctaagg 20846891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 41049726 - 41049619
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    ||||||||| |||| | ||||| | ||||||||||||||| |||| || |||  |||| |||||||| | | ||||||||||||| |||| ||||||||     
T  41049726 cccaaaaattcattttcaaactttcccaggttcaatctcaatctaaaaacttgcctaaccattattatacatgttcaggcactcagaaacatctaaggtt 41049627  T
Q  197 caacttaa 204  Q
    | ||||||    
T  41049626 cgacttaa 41049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 38801138 - 38801056
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | ||||||||||||||| || ||||| || |||||    
T  38801138 attccaggttcaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaagacatctaaagttcaact 38801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 38801199 - 38801157
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  38801199 actcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 21861372 - 21861335
Alignment:
Q  52 cgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  21861372 cgcgaggcgagggcctctactcgctatggcgagttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 22354387 - 22354338
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| ||| |||||||||  ||||||||||||| ||||||||||||||    
T  22354387 ctgggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggt 22354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 16093572 - 16093508
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    |||||||||||| || |||| ||||||||||||||||| |||| || |||  | |||||||||||    
T  16093572 caaaaatccattttttaacttttccaggttcaatctcaatctaaaaacttgccaaatcattatta 16093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 24087730 - 24087842
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||||||  |||||||||||||| ||||||||  |||  ||| | ||| |||||||||| |  |||||||  ||||||||||| |||| ||  ||    
T  24087730 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctattccgagttcaatctcagtctaaaacttt 24087829  T
Q  150 ttctaatcattat 162  Q
      |||||||||||    
T  24087830 gcctaatcattat 24087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 5976 - 5760
Alignment:
Q  2 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    |||||||  |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| || || |    
T  5976 gcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaaatcac 5877  T
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 199  Q
     ||||||||| ||||||||||| | |||||||||||| |||| ||| ||| ||||||||||||| | | ||||||| |||||||||| |||||| | |||    
T  5876 -aaaatccatccttaaactattactggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaaaaacatctaagattcaa 5778  T
Q  200 cttaaggggcaaaactac 217  Q
    ||||| || |||| ||||    
T  5777 cttaaaggtcaaatctac 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 888 - 666
Alignment:
Q  2 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    |||||||  |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| ||||| |    
T  888 gcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaactcac 789  T
Q  101 aaaaatccattcttaaactattccaggt------tcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 193  Q
     ||||||||| ||||||||||| |||||      ||||||||| |||| ||||||| ||||||||||||| | | |||||||||||||||||| ||||||    
T  788 -aaaatccatccttaaactattacaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggcactcaaaaacatctaag 690  T
Q  194 gtccaacttaaggggcaaaactac 217  Q
     | |||||||| || |||| ||||    
T  689 attcaacttaaaggtcaaatctac 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 19531 - 19726
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| |||||||||||| |||  |||| ||||||||||||||| | |||||||||||  |||||| |||||||||||||||||||||| ||| |     
T  19531 tgcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacaca 19630  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
     |||||| |||||| |||   |||||||||||||||||||||  |||| || ||||||||||||| | | |||||||||||||||||| |||||||    
T  19631 taaaaattcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 19726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 405 - 590
Alignment:
Q  11 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 109  Q
    |||||||||||| |||  |||| ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||| ||||| ||||||| ||    
T  405 atcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattca 504  T
Q  110 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||| |||   ||||| |||||||||||||||  ||||||| ||||||||||||| | | ||| |||||||||||||  |||||||    
T  505 ttctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaaaaagtctaagg 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2499 - 2313
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||| ||||| ||| | ||||||||||| |  || ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  2499 tgcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcgagttcaggtataactcc 2400  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    || || | | ||||| ||||| |||||||||||||||| |||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  2399 cacaagtacgttctt-aactaatccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 9342 - 9536
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 100  Q
    ||||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || |    
T  9342 tgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcac 9441  T
Q  101 aaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 194  Q
    |||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  9442 aaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 9536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 227849 - 227942
Alignment:
Q  92 gtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | ||| ||||||||||||    
T  227849 gtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 225705 - 225769
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 97  Q
    |||||||||||  |||||||||||||| | |||||||||| |  ||||||| |||||||||||||    
T  225705 attctgtaactatgtaactcgcgaggcaagggcctctacttgttatggcgatttcaggtgtaact 225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 45646 - 45450
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc- 98  Q
    ||||||||  |||||||||| |||||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||||  || ||     
T  45646 tgcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtacaattca 45547  T
Q  99 ccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 194  Q
    | |||||| ||||| |||| | || ||||||||||||||||||   ||||||| ||||||||||||  ||||| ||||||||||||||||| |||||||    
T  45546 caaaaaattcattc-taaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacata-ttcaggcactcaaaaacatctaagg 45450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6801 - 6987
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||| ||||| ||| | ||| ||||||| |  || |||||||| || |||||| |||||||||||||||||||||| |||||||    
T  6801 tgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggtataactcc 6900  T
Q  100 ca-aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    || ||  | | |||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||| | | || |||||||||||||    
T  6901 cacaagtttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactcaaaa 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 8784 - 8824
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  8784 actcgcgaggcgagggcctctactcgctatggcgagttcag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 12329 - 12478
Alignment:
Q  68 ctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat 167  Q
    |||||||| ||||| | ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||| |     
T  12329 ctactcgctatggcaaattcagttgtaactccaaaaaatccattcttaa-ctattccaggttcaatctcaatctaaaatctttcctaatcattattatac 12427  T
Q  168 a-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 217  Q
    | |||||| ||||||||| | |||||    ||||||||||  |||||||||    
T  12428 atgttcagacactcaaaatcatctaaatatcaacttaaggatcaaaactac 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 1900 - 1748
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 132  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||| |||||||   | | |||||  | |||||| |||   ||||||||||||    
T  1900 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagatttccaaagtttcattctaaaatctttccaggttcaa 1801  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  1800 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 160950 - 161145
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  ||| |||||| |||||| |||| ||||||||||| | || |||| |||| ||  |||||||||||||||||||| |||||||  |  ||     
T  160950 tgcgacaaagatcacatttatcctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcgacttcaggttcagttca 161049  T
Q  100 caaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||| |||||| ||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  161050 caaaaattcattct-aaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 161145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 4814 - 4968
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 140  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  4814 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 4913  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  4914 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 12396 - 12550
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 140  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  12396 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 12495  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  12496 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 22348 - 22502
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 140  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  22348 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 22447  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  22448 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 22502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 132967 - 133113
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  |||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatct 133066  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  133067 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 40018 - 39864
Alignment:
Q  11 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 109  Q
    ||||||||||||||||  |||  ||| ||||||| | || ||||||||||||  ||||||||| |||||||| ||||||||| ||||||||| || | |     
T  40018 atcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggtataactcccacaagttcg 39919  T
Q  110 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    |||||||||||||||||||| ||| ||| |||  ||||||| |||| ||||||||    
T  39918 ttcttaaactattccaggttgaatgtcaatctccaatctttcctaaccattatta 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 101781 - 101854
Alignment:
Q  122 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  101781 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacttctaagg 101854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 12228 - 12388
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 133  Q
    |||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||||     ||| |||| | ||||||| || || ||||||||||||    
T  12228 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattctt-aattaatccaggttcaat 12326  T
Q  134 ctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 194  Q
    ||||||||| | ||||| ||||||||||||  ||||| ||||| ||||||||| | |||||||    
T  12327 ctcattctacattctttcctaatcattattaaacata-ttcagacactcaaaagcatctaagg 12388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 10385 - 10283
Alignment:
Q  11 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 110  Q
    ||||||||||||||||||| | | | |||||| ||  ||||||||||||||  ||||||||||||  ||||||||||||||||||||| ||||||| |||    
T  10385 atcgcatttaacctaacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggtgtaactcacaaaaattcat 10286  T
Q  111 tct 113  Q
    |||    
T  10285 tct 10283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 10289 - 10228
Alignment:
Q  135 tcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    |||||||| ||||||| ||||||||||||| | | |||||||||||||||||| ||||||||    
T  10289 tcattctaaaatctttactaatcattattagacatgttcaggcactcaaaaacatctaaggt 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 32397 - 32543
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    |||||||||| ||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  |||||    
T  32397 actcgcgaggtgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatct 32496  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  32497 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 32543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 27400 - 27281
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||||||||| | | |||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||     
T  27400 cccaaaaatccattcttaaaatttcccaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 27301  T
Q  197 caacttaaggggcaaaacta 216  Q
    ||||||||||| ||||||||    
T  27300 caacttaagggtcaaaacta 27281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 27526 - 27485
Alignment:
Q  48 aactcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  27526 aactcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 3855 - 3937
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  3855 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 7919 - 8001
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  7919 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 8001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 17078 - 17240
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 131  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17078 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctat-ccaggttca 17176  T
Q  132 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17177 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 24279 - 24169
Alignment:
Q  98 cccaaaaatcc-attcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||| |    
T  24279 cccaaaaatcccatttttaaactattccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaatcatctaagct 24180  T
Q  196 ccaacttaagg 206  Q
     ||||||||||    
T  24179 tcaacttaagg 24169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 20247 - 20087
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 132  Q
    |||||||| | || |||| |||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  20247 ttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 20150  T
Q  133 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||| | ||||| ||| ||||||||| | | ||||||| |||||||| | |||||||    
T  20149 tctcattctacattctttcctactcattattaaacatgttcaggaactcaaaagcatctaagg 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7930 - 7841
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||  |||||||||| |||||||| | ||| |||||||||| ||||||||||||||  |||| ||||||| ||||||||||||||    
T  7930 tgcgacaaagatcgcatttaccctaacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 29011 - 28935
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 200  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||    
T  29011 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaac 28935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 25879 - 25726
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||||| ||||||  ||   || ||||||||||||||| ||    
T  25879 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcct 25780  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  25779 acattctttcctaatcattattagacatgttcaggcactcaaaaccatctaagg 25726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 28665 - 28470
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||  |||||||||||||||| ||| | ||||||||||      |||||||||||||  |||||| |||||||||||||||||||||  |  ||     
T  28665 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttca 28566  T
Q  100 caaaaatccattcttaaactattcc-aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||| | |||||| ||| | |||  |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  28565 caaaatttcattct-aaagtcttcgtaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 28470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 45; Significance: 9e-17; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 62913 - 63021
Alignment:
Q  87 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 185  Q
    |||||| ||||| ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||| |||||||||||    
T  62913 caggtgcaactcacaaaaattcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaaa 63012  T
Q  186 cctctaagg 194  Q
    | |||||||    
T  63013 catctaagg 63021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 136207 - 136132
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||||||||    
T  136207 catttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 144915 - 144840
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||||||||    
T  144915 catttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 136049 - 135942
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  136049 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 135950  T
Q  197 caacttaa 204  Q
    | ||||||    
T  135949 cgacttaa 135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 144757 - 144650
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  144757 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 144658  T
Q  197 caacttaa 204  Q
    | ||||||    
T  144657 cgacttaa 144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 124891 - 124940
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  124891 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 194
Target Start/End: Original strand, 2159 - 2311
Alignment:
Q  44 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 142  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  2159 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 2258  T
Q  143 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  2259 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 119280 - 119200
Alignment:
Q  127 gttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaagg 206  Q
    ||||||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | ||||| || ||||||||||    
T  119280 gttcaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaatgttcaacttaagg 119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 5966 - 6053
Alignment:
Q  108 cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||| |   |||||||||||||||||| |||||||    
T  5966 cattcttaaactattccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacatctaagg 6053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 17029 - 16876
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| ||| || ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  17029 ctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 16931  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16930 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 79096 - 79016
Alignment:
Q  122 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||||| | || || ||||||||||||| | | ||||| |||||||||| | |||||||| |||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaact 79016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 79151 - 79107
Alignment:
Q  34 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccat 78  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||    
T  79151 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 15422 - 15276
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttcaatctcattctagaatc 147  Q
    |||||||||||||  |||||| ||||| |||||||||||||||   | |||||||  | |||||| ||| |||| |||| ||||||||||||||| | ||    
T  15422 actcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctat-ccagattcaatctcattctacattc 15324  T
Q  148 ttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 194  Q
    ||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  15323 tttcctaatcattattaaacata-ttcaggcactcaaaagcatctaagg 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 13007 - 13124
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||| || | | | |||||||||||||| | ||||| ||     
T  13007 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattaatatacatggtcaggcactcaaaatcatctaaagtt 13106  T
Q  197 caacttaaggggcaaaac 214  Q
    ||||||||||| ||||||    
T  13107 caacttaagggtcaaaac 13124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 649 - 802
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||||||||||  ||||||||||| |   | ||| |||  | |||||| ||    ||| |||||||||||||||||    
T  649 ctgggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattct 748  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  749 acattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 3777 - 3920
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcc-attcttaaactattccaggttcaatctcattct 141  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |   |||||  ||  ||||||||||||||||||| ||    
T  3777 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcct 3876  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    | | ||||| ||||||||||||| | | |||||| |||||||||    
T  3877 acattctttcctaatcattattagacatgttcagacactcaaaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 14004 - 14119
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14004 caaaaatccatttttaaacattaccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14102  T
Q  198 aacttaaggggcaaaac 214  Q
    |||||||||| ||||||    
T  14103 aacttaagggacaaaac 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 11260 - 11178
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||   |||||||| |||||    
T  11260 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttcaact 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 194
Target Start/End: Complemental strand, 16413 - 16260
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 141  Q
    ||||| |||||||||||||  |||||| |||||||||||||||||||||   | | |||||  |  |||||  |||   |||||||||||||||||||||    
T  16413 tgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattct 16314  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16313 aaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 39067 - 39219
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||  ||  | |||||  || || |||||||||||||||||||||    
T  39067 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattcaaaatct-ttccaggttcaatctcattct 39165  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  39166 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 39219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 53230 - 53113
Alignment:
Q  98 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  53230 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 53131  T
Q  196 ccaacttaaggggcaaaa 213  Q
     ||||||||||| |||||    
T  53130 tcaacttaagggtcaaaa 53113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 53354 - 53314
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcag 89  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  53354 actcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 8029 - 7948
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  8029 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 15921 - 15866
Alignment:
Q  33 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 88  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  15921 attctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 13570 - 13636
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  13570 cccaaaaatccattcttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 3133 - 3231
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 195  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  3133 cccaaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 3231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 19724 - 19649
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||||| |  ||||||||||||| ||||| ||||||||  |||||||||| | ||||||||||||||    
T  19724 catttaacctaacaaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 40198 - 40268
Alignment:
Q  21 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  40198 acctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 103341 - 103234
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || ||||||||||     
T  103341 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcctctaaggtt 103242  T
Q  197 caacttaa 204  Q
    | ||||||    
T  103241 cgacttaa 103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 103478 - 103403
Alignment:
Q  15 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||||| |  |||||||| |||  |||||| |||||||  |||||||||||| ||||||||||||||    
T  103478 catttaacctaacaaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 80701 - 80788
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||||||    
T  80701 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 80788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 2609 - 2464
Alignment:
Q  49 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 148  Q
    |||||||||||||  |||||||||||||||||||||||||||| | | | |  ||| | |||||| |||   || ||||||||| ||||||||  |||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggt-tcagttcacaaatttcattctaaaatctttacaggttcaaactcattctccaatct 2511  T
Q  149 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || ||||||||||||| | | ||||||| |||||||| | |||||||    
T  2510 ttcctaatcattattagacatgttcaggtactcaaaagcatctaagg 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 211 - 356
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattc 140  Q
    |||||| ||||||| |||||  ||||||||||||  ||||||||||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  211 ctgggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 309  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaac 186  Q
    || | ||||| ||||||||||||| | | ||||||||||||||||||    
T  310 tacattctttcctaatcattattagacatgttcaggcactcaaaaac 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 34509 - 34587
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  34509 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 34587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 13398 - 13447
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  13398 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 2177 - 2099
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2177 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 52218 - 52372
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  52218 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 52317  T
Q  141 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  52318 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 52372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 167721 - 167644
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  167721 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 167644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 167794 - 167745
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  167794 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 2820 - 2739
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 8298 - 8185
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 149  Q
    ||||||||| ||  |||||||||||||| ||||| ||  |||  ||| | ||| |||||||||| | ||||||||| |||||||||||||||| || |||    
T  8298 ctcgcgaggtgagagcctctactcgccacggcgatttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattctaaaacctt 8199  T
Q  150 ttctaatcattatt 163  Q
      ||||||||||||    
T  8198 gcctaatcattatt 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 695 - 623
Alignment:
Q  123 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||| ||||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  695 ccaggttcaatctcgttctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 1461 - 1344
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 196  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || ||| ||||||||||| || | | |||||||||||||||| | ||| | ||     
T  1461 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgtctaatcattaatatacatgttcaggcactcaaaatcatctgaagtt 1362  T
Q  197 caacttaaggggcaaaac 214  Q
    |||||| |||| ||||||    
T  1361 caactttagggtcaaaac 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 28924 - 28996
Alignment:
Q  123 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||||| | ||||| ||||||||||||| | | ||||||| |||||||| | |||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaagg 28996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 195
Target Start/End: Complemental strand, 32772 - 32619
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 142  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  32772 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 32673  T
Q  143 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  32672 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 32619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 195
Target Start/End: Original strand, 46233 - 46386
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 142  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  46233 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 46332  T
Q  143 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  46333 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 46386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 16473 - 16537
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||| | ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  16473 ttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaa 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 5854 - 5782
Alignment:
Q  123 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||| ||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  5854 ccaggttcaatctcatcctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 7095 - 7213
Alignment:
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 197  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||| ||||||||| | |||||  | |    
T  7095 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcagtcactcaaaatcatctaaaattc 7193  T
Q  198 aacttaaggggcaaaactac 217  Q
    |||||||||  |||||||||    
T  7194 aacttaaggttcaaaactac 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 799 - 717
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  799 attccaggttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 867 - 818
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  867 ctgggttactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 818  T

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Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 10173 - 10097
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  10173 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 10097  T

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Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 20425 - 20572
Alignment:
Q  48 aactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 146  Q
    ||||||||||||||  |||||| |||| | ||||||| ||||||   |||||| |||  | |||||| || || ||||||||||||||| |||||| | |    
T  20425 aactcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatct-ttccaggttcaatcttattctacatt 20523  T
Q  147 cttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20524 ctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20572  T

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Target: scaffold1137 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 2157 - 1962
Alignment:
Q  1 tgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcc 99  Q
    ||||||||| |||||||||||||||| ||| | ||||||||||      |||||||||||||  |||||| || ||||||||||||||||||  |  ||     
T  2157 tgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgcttgccatggcgagttcaggttcagttca 2058  T
Q  100 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||||| | |||||| ||    ||  | |||||||||||||||  ||||||| ||||||||||||| | | ||||||  |||||||||| |||||||    
T  2057 caaaatttcattctaaagtctttttatgttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaaaaacatctaagg 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 20717 - 20863
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattct-taaactattccaggttcaatctcattctagaatc 147  Q
    ||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  |||||| ||| || |||||||||||||||||| ||| | ||    
T  20717 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatct-ttccaggttcaatctcatcctacattc 20815  T
Q  148 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20816 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 25545 - 25632
Alignment:
Q  98 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||| ||||||| ||||| ||||||||||| |||| || |||  ||||||||||||| | |  |||||||||||||||    
T  25545 cccaaaaatccatttttaaacttttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

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Target: scaffold0718 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 4878 - 4796
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  4878 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaact 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 13869 - 13951
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13869 attccaggttcaatctcatgctacatcctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 310 - 392
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  310 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 392  T

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Target: scaffold0358; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 5086 - 5168
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5086 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 243 - 291
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  243 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 5019 - 5067
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  5019 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 17742 - 17668
Alignment:
Q  122 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 195  Q
    ||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  17742 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 18693 - 18619
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 29149 - 29239
Alignment:
Q  123 ccaggttcaatctcattctagaatcttttctaatcattattacatag-ttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 212  Q
    |||||| |||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||||| ||||||||||| ||||    
T  29149 ccaggtccaatctcaatctaaaaacttgcctaatcattattatatatattcaggcactcaaaatcatctaaggttcaacttaagggacaaa 29239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 791 - 714
Alignment:
Q  125 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  791 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 864 - 815
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  864 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 16657 - 16738
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
    ||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  16657 caggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 16738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 16047 - 16118
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 194  Q
    ||||||||||||||||||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  16047 caggttcaatctcattctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaagg 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 18021 - 17909
Alignment:
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 198  Q
    ||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| |||| ||||||||||   |||||||| ||    
T  18021 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcatgcactcaaaattatctaaggttca 17923  T
Q  199 acttaaggggcaaa 212  Q
    ||||||||| ||||    
T  17922 acttaagggacaaa 17909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 338 - 374
Alignment:
Q  50 ctcgcgaggcgatggcctctactcgccatggcgagtt 86  Q
    |||||||||||| ||||||||||||||||||||||||    
T  338 ctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 8267 - 8203
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 15213 - 15127
Alignment:
Q  119 tattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaacttaa 204  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| || |||||||||||| | |||| ||| ||||||||    
T  15213 tattccaggttcaatctcatcctacattctttcctaatcattattagacata-ttaaggcactcaaaagcatctacggttcaacttaa 15127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 1633 - 1562
Alignment:
Q  19 taacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 90  Q
    ||||||||||| |  |||||||| |||| | ||| ||||||||  |||||||||||| ||||||||||||||    
T  1633 taacctaacaaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgagttcagg 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 827 - 684
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 141  Q
    |||||| |||||||||||||  |||||  ||| || ||||||||||||||   | | |||||| | ||||||  ||   || ||| ||||||||||||||    
T  827 ctgggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattcaatctcattct 728  T
Q  142 agaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  727 acattctttcctaatcattattagacatgttcaggcactcaaaa 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 35625 - 35508
Alignment:
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcca 198  Q
    ||||||||| | ||||||| |  ||||| | |||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | | |||||| ||    
T  35625 aaaaatccacttttaaactttctcaggtccgatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatttaaggttca 35527  T
Q  199 acttaaggggcaaaactac 217  Q
    ||||||||| |||||||||    
T  35526 acttaagggacaaaactac 35508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 268094 - 268157
Alignment:
Q  101 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 164  Q
    ||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  268094 aaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 268157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 1288 - 1370
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatta-catagttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||  |  |||||||||||||||  | |||||||| |||||    
T  1288 attccaggttcaatctcatcctacattctttcctaatcattattagtaatgttcaggcactcaaaggcatctaaggttcaact 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 5222 - 5304
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | |  |||| |||||||||| | |||||||| |||||    
T  5222 attccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaact 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 13340 - 13262
Alignment:
Q  124 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    |||| |||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13340 caggctcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13262  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 32438 - 32520
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| | | | ||||| ||| ||||||||| | | |||||||||||||||| | |||||||| |||||    
T  32438 attccaggttcaatctcatcccacattctttcctagtcattattagacatgttcaggcactcaaaagcatctaaggttcaact 32520  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 21275 - 21357
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||| ||||||||| ||| | |||||  |||||||||||| | | ||||||||||| |||||| |||||||| |||||    
T  21275 attccaggtacaatctcatcctacattctttcataatcattattagacatgttcaggcactaaaaaacatctaaggttcaact 21357  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 39666 - 39592
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 194  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||||||| |||||||| | |||||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaagg 39592  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 40242 - 40306
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||||| ||  | ||||| ||||||||||||| | | ||||||||||||||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggcactcaaaa 40306  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 39783 - 39832
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  39783 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 75029 - 74980
Alignment:
Q  42 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  75029 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

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Target: scaffold0309 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 6917 - 6965
Alignment:
Q  43 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 91  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  6917 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 47360 - 47442
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 201  Q
    ||||||||||||||||||| ||| | || || ||||||||||||  ||||| ||||| ||||||||| | |||||||| |||||    
T  47360 attccaggttcaatctcatcctacattcattcctaatcattattagacata-ttcagacactcaaaagcatctaaggttcaact 47442  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 24037 - 23973
Alignment:
Q  121 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 184  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  24037 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 23973  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 51953 - 52017
Alignment:
Q  120 attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaa 183  Q
    ||||||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  51953 attccaggttcaatctcgtcctacattctttcctaatcattattagacttgttcaggcactcaaa 52017  T

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