View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15463_low_14 (Length: 230)

Name: NF15463_low_14
Description: NF15463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15463_low_14
NF15463_low_14
[»] chr2 (19 HSPs)
chr2 (1-214)||(14486776-14486978)
chr2 (1-66)||(8192396-8192460)
chr2 (1-61)||(35171894-35171953)
chr2 (1-61)||(11941254-11941313)
chr2 (1-59)||(19174858-19174915)
chr2 (1-66)||(12543232-12543296)
chr2 (1-66)||(18708565-18708630)
chr2 (1-61)||(44976197-44976257)
chr2 (1-61)||(3943834-3943893)
chr2 (1-61)||(15038053-15038112)
chr2 (1-61)||(28668967-28669026)
chr2 (1-61)||(30466874-30466933)
chr2 (1-61)||(33827617-33827676)
chr2 (1-61)||(44946097-44946156)
chr2 (1-58)||(4567481-4567537)
chr2 (1-61)||(5394111-5394170)
chr2 (1-61)||(19849927-19849986)
chr2 (1-33)||(28194182-28194214)
chr2 (1-45)||(36242356-36242400)
[»] chr7 (29 HSPs)
chr7 (1-66)||(28647061-28647126)
chr7 (7-66)||(23330789-23330848)
chr7 (1-66)||(21574146-21574211)
chr7 (1-61)||(17196994-17197053)
chr7 (1-61)||(21835249-21835308)
chr7 (1-61)||(22119986-22120045)
chr7 (1-61)||(40542954-40543013)
chr7 (1-61)||(2103153-2103212)
chr7 (1-61)||(2751369-2751428)
chr7 (1-61)||(3851855-3851914)
chr7 (1-61)||(7275375-7275434)
chr7 (1-61)||(29861768-29861827)
chr7 (1-61)||(654749-654807)
chr7 (1-61)||(7175906-7175965)
chr7 (1-61)||(10091286-10091345)
chr7 (1-61)||(11997947-11998006)
chr7 (18-58)||(22696419-22696459)
chr7 (1-61)||(22703584-22703643)
chr7 (1-61)||(23012552-23012611)
chr7 (1-61)||(23092194-23092253)
chr7 (16-66)||(35476433-35476483)
chr7 (1-66)||(1766188-1766252)
chr7 (5-61)||(18044205-18044260)
chr7 (1-61)||(21217877-21217936)
chr7 (1-61)||(21373808-21373867)
chr7 (1-45)||(22638401-22638445)
chr7 (1-61)||(31197688-31197747)
chr7 (1-61)||(41907557-41907616)
chr7 (1-45)||(42913557-42913601)
[»] chr8 (28 HSPs)
chr8 (1-58)||(18128613-18128670)
chr8 (1-61)||(4718743-4718802)
chr8 (1-61)||(39349354-39349413)
chr8 (5-66)||(13749147-13749209)
chr8 (9-66)||(28908915-28908972)
chr8 (1-61)||(2618284-2618343)
chr8 (1-61)||(8765570-8765629)
chr8 (1-61)||(20306006-20306065)
chr8 (1-61)||(21092639-21092698)
chr8 (1-57)||(21603332-21603387)
chr8 (1-61)||(34237699-34237758)
chr8 (6-61)||(15259455-15259509)
chr8 (1-46)||(2639455-2639500)
chr8 (1-66)||(34639252-34639316)
chr8 (1-61)||(3734667-3734726)
chr8 (1-61)||(6953051-6953110)
chr8 (1-61)||(20470015-20470074)
chr8 (1-45)||(24999347-24999391)
chr8 (1-61)||(28193572-28193631)
chr8 (1-61)||(42643162-42643221)
chr8 (14-61)||(22200617-22200664)
chr8 (1-63)||(13579947-13580009)
chr8 (1-61)||(19471707-19471767)
chr8 (1-61)||(19542631-19542691)
chr8 (1-61)||(19590005-19590065)
chr8 (1-45)||(10292167-10292211)
chr8 (1-61)||(28088384-28088443)
chr8 (1-61)||(42328102-42328161)
[»] chr6 (21 HSPs)
chr6 (1-66)||(9208340-9208405)
chr6 (1-61)||(11448965-11449024)
chr6 (1-65)||(17225756-17225819)
chr6 (1-61)||(21982364-21982423)
chr6 (1-61)||(654190-654249)
chr6 (1-61)||(12390519-12390578)
chr6 (1-61)||(15360142-15360201)
chr6 (1-61)||(34147440-34147499)
chr6 (1-61)||(34160056-34160115)
chr6 (5-66)||(10377803-10377865)
chr6 (1-61)||(17081098-17081157)
chr6 (1-64)||(17149500-17149563)
chr6 (1-66)||(14504126-14504191)
chr6 (1-61)||(1345029-1345088)
chr6 (1-61)||(3222680-3222738)
chr6 (30-66)||(3419276-3419312)
chr6 (1-61)||(9239069-9239128)
chr6 (1-61)||(9690682-9690741)
chr6 (1-61)||(9844032-9844091)
chr6 (1-29)||(11007290-11007318)
chr6 (1-61)||(21148555-21148613)
[»] chr4 (25 HSPs)
chr4 (1-66)||(9646260-9646325)
chr4 (1-61)||(32990529-32990588)
chr4 (1-61)||(34844802-34844861)
chr4 (1-61)||(40058896-40058955)
chr4 (1-61)||(52983713-52983772)
chr4 (1-61)||(19660576-19660635)
chr4 (1-61)||(20078028-20078087)
chr4 (1-61)||(54127386-54127445)
chr4 (1-61)||(5609246-5609305)
chr4 (1-61)||(20566444-20566503)
chr4 (1-61)||(27528839-27528898)
chr4 (1-61)||(32986291-32986350)
chr4 (1-61)||(33696323-33696382)
chr4 (1-61)||(34723893-34723952)
chr4 (1-61)||(44343608-44343667)
chr4 (1-61)||(45787748-45787807)
chr4 (1-61)||(46714487-46714546)
chr4 (2-61)||(35674786-35674844)
chr4 (7-61)||(33992720-33992773)
chr4 (1-66)||(10125908-10125972)
chr4 (1-66)||(13716494-13716559)
chr4 (25-66)||(39288947-39288987)
chr4 (1-61)||(22488072-22488131)
chr4 (1-61)||(51535711-51535774)
chr4 (1-61)||(53787101-53787161)
[»] chr1 (22 HSPs)
chr1 (1-66)||(9926190-9926255)
chr1 (1-61)||(24674487-24674546)
chr1 (2-66)||(1486506-1486572)
chr1 (1-66)||(16539696-16539760)
chr1 (1-66)||(16899591-16899656)
chr1 (1-66)||(32729633-32729697)
chr1 (1-61)||(4621281-4621340)
chr1 (1-61)||(7766771-7766830)
chr1 (1-61)||(8077741-8077800)
chr1 (1-61)||(17935863-17935922)
chr1 (1-61)||(24122117-24122176)
chr1 (5-62)||(1138671-1138728)
chr1 (5-66)||(25237037-25237098)
chr1 (1-66)||(37047080-37047145)
chr1 (1-45)||(8254796-8254840)
chr1 (1-61)||(15059446-15059505)
chr1 (1-60)||(12876980-12877038)
chr1 (1-58)||(34778436-34778492)
chr1 (11-66)||(1095055-1095112)
chr1 (1-61)||(9500399-9500458)
chr1 (38-66)||(19034467-19034495)
chr1 (1-61)||(30677270-30677329)
[»] scaffold1175 (1 HSPs)
scaffold1175 (1-61)||(2470-2529)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-61)||(7353-7412)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-61)||(40419-40478)
[»] chr5 (24 HSPs)
chr5 (1-61)||(15641149-15641208)
chr5 (1-61)||(32059484-32059543)
chr5 (1-66)||(19145456-19145520)
chr5 (1-66)||(24158210-24158275)
chr5 (1-62)||(36895517-36895578)
chr5 (1-61)||(8484705-8484764)
chr5 (1-61)||(27498775-27498834)
chr5 (1-61)||(35425107-35425166)
chr5 (1-61)||(7085670-7085729)
chr5 (1-61)||(18207301-18207360)
chr5 (1-61)||(19456255-19456313)
chr5 (1-61)||(21236406-21236465)
chr5 (1-45)||(23290705-23290749)
chr5 (1-61)||(30485922-30485981)
chr5 (1-61)||(34049905-34049964)
chr5 (1-31)||(13038499-13038529)
chr5 (1-31)||(13108494-13108524)
chr5 (1-31)||(22693058-22693088)
chr5 (1-31)||(31287990-31288020)
chr5 (1-61)||(11926545-11926605)
chr5 (1-61)||(4603871-4603930)
chr5 (1-61)||(6014324-6014383)
chr5 (5-45)||(22392797-22392837)
chr5 (1-61)||(38684302-38684360)
[»] chr3 (35 HSPs)
chr3 (1-61)||(18176931-18176990)
chr3 (1-61)||(25289758-25289817)
chr3 (1-61)||(34492619-34492678)
chr3 (1-61)||(35493005-35493064)
chr3 (1-61)||(40133493-40133552)
chr3 (1-61)||(53233954-53234013)
chr3 (1-61)||(8097323-8097382)
chr3 (1-61)||(8456194-8456253)
chr3 (1-61)||(10190786-10190845)
chr3 (1-61)||(21363037-21363096)
chr3 (1-61)||(25379855-25379914)
chr3 (1-61)||(26108386-26108445)
chr3 (1-61)||(45272460-45272519)
chr3 (1-61)||(45529798-45529857)
chr3 (1-61)||(46576442-46576501)
chr3 (1-61)||(48977482-48977541)
chr3 (1-61)||(49258306-49258365)
chr3 (1-43)||(26158922-26158964)
chr3 (1-59)||(33398512-33398569)
chr3 (5-61)||(1242067-1242122)
chr3 (1-61)||(10083863-10083922)
chr3 (1-61)||(15566544-15566602)
chr3 (1-61)||(24165759-24165817)
chr3 (1-61)||(25344101-25344160)
chr3 (1-61)||(26174207-26174266)
chr3 (5-61)||(30257718-30257773)
chr3 (1-61)||(39041896-39041955)
chr3 (1-56)||(32151523-32151577)
chr3 (1-59)||(54475777-54475834)
chr3 (1-43)||(55371338-55371380)
chr3 (1-66)||(1178260-1178324)
chr3 (1-62)||(4252440-4252501)
chr3 (1-61)||(30807196-30807256)
chr3 (1-66)||(30695289-30695358)
chr3 (1-61)||(52821680-52821738)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-61)||(5126-5185)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-61)||(161903-161962)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-61)||(1100-1159)
[»] scaffold0366 (1 HSPs)
scaffold0366 (1-61)||(9343-9402)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-45)||(66863-66907)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-61)||(97410-97469)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-31)||(39215-39245)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-58)||(52915-52971)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-61)||(2-61)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-61)||(41688-41747)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-61)||(32382-32441)


Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 14486978 - 14486776
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgcccaataatttcaaatcttatttgctcataaatcactt 100  Q
    ||||||||||||||||||| |||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14486978 aatcccaccgcccacttgcaggggccccgttct-----------aagctctgtatggacttgcccaataatttcaaatcttatttgctcataaatcaatt 14486890  T
Q  101 aaaagtgtttctcaaaccttaaaaattattctgttgcacaggacccatttttccttatattgcttgcatctaaaggccacatagtaagagatcaaaggat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  14486889 aaaagtgtttctcaaaccttaaaaattattctgttgcacaggacccatttttctttatattgcttgcatctaaaggccacatagtaagagatcaaagaat 14486790  T
Q  201 taaataacaattaa 214  Q
    ||||||||||||||    
T  14486789 taaataacaattaa 14486776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8192396 - 8192460
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||||||||| ||| || ||||| ||||||||||||||||| ||||||||||||||    
T  8192396 aatcccaccgcccacttgcgaggggcc-gttctaagccagagcaaagctctatatggacttgccca 8192460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35171953 - 35171894
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  35171953 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 35171894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11941254 - 11941313
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  11941254 aatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatggactt 11941313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19174915 - 19174858
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggac 59  Q
    |||||||||||||| || ||||| | ||||||| |||||||||||||||||||||||||    
T  19174915 aatcccaccgcccatttacgggg-ctccgttctaagccagagcaaagctctgtatggac 19174858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12543296 - 12543232
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||  ||||||||||||||||  |||| | | ||||||||||||||||||||||||||||    
T  12543296 aatcccaccatccacttgcgggggccct-ttctaaactagagcaaagctctgtatggacttgccca 12543232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18708630 - 18708565
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||| ||| ||||||||| |||||| | || ||||||||||||||||||| || ||||||    
T  18708630 aatcccaccgtccatttgcgggggtcccgttttaagtcagagcaaagctctgtatgaacatgccca 18708565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44976197 - 44976257
Alignment:
Q  1 aatcccaccgcccacttgcgggg-gccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||| ||||||||||||||    
T  44976197 aatcccaccgcccacttgcggggagccccgtttaaagccagagcaaa-ctctgtatggactt 44976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3943893 - 3943834
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||| |||||||||||| ||||||||   ||||||||| |||||||||||||||||    
T  3943893 aatcccaccacccacttgcgggagccccgtttaaagccagagc-aagctctgtatggactt 3943834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15038112 - 15038053
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||| |||||   ||||| ||| |||||||||||||||||    
T  15038112 aatcccaccgcccacttgcgggggctccgtttaaagccaaagc-aagctctgtatggactt 15038053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28669026 - 28668967
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||| ||||||||||||   ||||| ||| |||||||||||||||||    
T  28669026 aatcccaccgcccacttgtgggggccccgtttaaagccaaagc-aagctctgtatggactt 28668967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30466874 - 30466933
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||| |||||||||||||||||| |||   ||||||||| |||||||||||||||||    
T  30466874 aatcccactgcccacttgcgggggcccggtttaaagccagagc-aagctctgtatggactt 30466933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33827617 - 33827676
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||| |||| ||||||   ||||||||| |||||||||||||||||    
T  33827617 aatcccaccgcccacttgcaggggtcccgtttaaagccagagc-aagctctgtatggactt 33827676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44946097 - 44946156
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| ||| |||||||||||||    
T  44946097 aatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagttctgtatggactt 44946156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4567481 - 4567537
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatgga 58  Q
    |||||||||||||||||| ||||||||||||   ||||||| | ||||||||||||||    
T  4567481 aatcccaccgcccacttgtgggggccccgtttaaagccagaac-aagctctgtatgga 4567537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5394170 - 5394111
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||| |||||| ||   || ||||||||| ||||||||||||||    
T  5394170 aatcccaccgcccacttgcggcggccccatttaaagtcagagcaaa-ctctgtatggactt 5394111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19849986 - 19849927
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| |||||||||||||||||||||| |||   ||||||||| ||||||||||| |||||    
T  19849986 aatctcaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatagactt 19849927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28194182 - 28194214
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  28194182 aatcccaccgcctacttgcgggggccccgttct 28194214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36242356 - 36242400
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    ||||||||||||||||||||||| |||||||   |||||||||||    
T  36242356 aatcccaccgcccacttgcggggaccccgtttaaagccagagcaa 36242400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28647126 - 28647061
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||||||| |||||||||||| | |||||||||||| |||||||| ||||||||||    
T  28647126 aatcccaccgcccacttgtgggggccccgttataagccagagcaaaactctgtattgacttgccca 28647061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 23330789 - 23330848
Alignment:
Q  7 accgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||    
T  23330789 accgcccacttgcggaggtcccgttttaagccagagcaaagctctgtatggacttgccca 23330848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21574146 - 21574211
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||| ||||||| ||||| |||||||||||||| |||| | |||||||||||||||||||||||||    
T  21574146 aatctcaccgcctacttgtgggggccccgttctaagcctgggcaaagctctgtatggacttgccca 21574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17196994 - 17197053
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  17196994 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 17197053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21835308 - 21835249
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  21835308 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 21835249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22120045 - 22119986
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  22120045 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 22119986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40542954 - 40543013
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  40542954 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 40543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2103212 - 2103153
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  2103212 aatcccaccgcccacttgcgggggccccatttaaagccagagc-aagctctgtatggactt 2103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2751428 - 2751369
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||| ||||||||||||||||   ||||||||| |||||||||||||||||    
T  2751428 aatcccaccgcccatttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 2751369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3851914 - 3851855
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| ||||||| |||||||||    
T  3851914 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctatatggactt 3851855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7275434 - 7275375
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||||| |||   ||||||||| |||||||||||||||||    
T  7275434 aatcccaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatggactt 7275375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29861827 - 29861768
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| ||| |||||||||||||    
T  29861827 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagttctgtatggactt 29861768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 654749 - 654807
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  654749 aatcccaccgcccacttgcggggg-cccgtttaaagccagagc-aagctctgtatggactt 654807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7175906 - 7175965
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| || |||   ||||||||| |||||||||||||||||    
T  7175906 aatcccaccgcccacttgcgggggtcctgtttaaagccagagc-aagctctgtatggactt 7175965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10091345 - 10091286
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||| |||| ||   ||||||||| |||||||||||||||||    
T  10091345 aatcccaccgcccacttgcggggaccccatttaaagccagagc-aagctctgtatggactt 10091286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11998006 - 11997947
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||||| |||   ||||||||| ||||| |||||||||||    
T  11998006 aatcccaccgcccacttgcgggggcccagtttaaagccagagc-aagctatgtatggactt 11997947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 22696459 - 22696419
Alignment:
Q  18 gcgggggccccgttcttagccagagcaaagctctgtatgga 58  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  22696459 gcgggggcctcgttctaagccagagcaaagctctgtatgga 22696419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22703643 - 22703584
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| ||||| |||||||||||    
T  22703643 aatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctttgtatggactt 22703584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23012552 - 23012611
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||| ||||||||| ||   ||||||||| |||||||||||||||||    
T  23012552 aatcccaccgcccacttgtgggggccccatttaaagccagagc-aagctctgtatggactt 23012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23092253 - 23092194
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||| ||||||||||||||||   ||||||||| |||||||||||||||||    
T  23092253 aatcccaccgtccatttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 23092194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 35476483 - 35476433
Alignment:
Q  16 ttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||| |||| |||||||| |||||||||||||||||||||| |||| ||||    
T  35476483 ttgcaggggtcccgttctaagccagagcaaagctctgtatgaacttaccca 35476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1766188 - 1766252
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||| |||||||||||| |||| ||||||||| |||||  |||||| ||||||||||||| ||||    
T  1766188 aatccaaccgcccacttgtgggg-ccccgttctaagccaaggcaaagttctgtatggacttaccca 1766252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 18044260 - 18044205
Alignment:
Q  5 ccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||| |||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  18044260 ccaccacccacttgtgggggccccgtttaaagccagagc-aagctctgtatggactt 18044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21217877 - 21217936
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||| ||||| ||||||   ||| ||||| |||||||||||||||||    
T  21217877 aatcccaccgcccacttgtggggggcccgtttaaagctagagc-aagctctgtatggactt 21217936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21373867 - 21373808
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| ||||| ||||||||||||||||||||   ||||||||| ||||||||||| |||||    
T  21373867 aatctcaccgtccacttgcgggggccccgtttaaagccagagc-aagctctgtatagactt 21373808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22638445 - 22638401
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    ||||||||||||||||||||| |||||||||   |||||||||||    
T  22638445 aatcccaccgcccacttgcggaggccccgtttaaagccagagcaa 22638401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31197747 - 31197688
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||||||||||||||||   ||| ||||| ||| |||||||||||||    
T  31197747 aatcccaccgaccacttgcgggggccccgtttaaagcaagagc-aagatctgtatggactt 31197688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41907557 - 41907616
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||| |||||||||||||||| ||||   ||||||||| || ||||||||||||||    
T  41907557 aatcccaccacccacttgcgggggccacgtttaaagccagagc-aacctctgtatggactt 41907616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42913557 - 42913601
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||||||||| ||||||||||||||||||||   |||||||||||    
T  42913557 aatcccaccgtccacttgcgggggccccgtttaaagccagagcaa 42913601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18128670 - 18128613
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatgga 58  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  18128670 aatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctctttatgga 18128613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4718802 - 4718743
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  4718802 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 4718743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39349413 - 39349354
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  39349413 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 39349354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13749209 - 13749147
Alignment:
Q  5 ccaccgcccacttgcggggg-ccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||    
T  13749209 ccactgcccacttgcggggggccccgttctaagccagagcaaagctttgtatgaacttgccca 13749147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 28908972 - 28908915
Alignment:
Q  9 cgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||| ||||||||   ||||||| ||||||||||||||||||||||||    
T  28908972 cgcccacttgcgggagccccgtttaaagccagaacaaagctctgtatggacttgccca 28908915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2618343 - 2618284
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  2618343 aatcccaccgcccacttgcgggggctccgtttaaagccagagc-aagctctgtatggactt 2618284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8765570 - 8765629
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||| ||||||||   ||||||||| |||||||||||||||||    
T  8765570 aatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatggactt 8765629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20306065 - 20306006
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  20306065 aatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatggactt 20306006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21092698 - 21092639
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  21092698 aatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatggactt 21092639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21603387 - 21603332
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatgg 57  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||    
T  21603387 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatgg 21603332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34237699 - 34237758
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||| |||||||||||||||||||   ||||||||| |||||||||||||||||    
T  34237699 aatcccaccgctcacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 34237758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 15259455 - 15259509
Alignment:
Q  6 caccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  15259455 caccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 15259509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2639455 - 2639500
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaa 46  Q
    |||||||||||||||||||||||||||||||   ||||||||||||    
T  2639455 aatcccaccgcccacttgcgggggccccgtttaaagccagagcaaa 2639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34639252 - 34639316
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||| |||| |||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||    
T  34639252 aatcctaccgtccacttgcagaggccc-gttctaagccagagcaaagctctgtatggacttaccca 34639316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3734667 - 3734726
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||| ||||| ||||||||||||||||   ||||||||| |||||||||||||||||    
T  3734667 aatcccactgcccatttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 3734726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6953051 - 6953110
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||| |||||||||||||| |||   ||||||||| |||||||||||||||||    
T  6953051 aatcccaccgccaacttgcgggggccctgtttaaagccagagc-aagctctgtatggactt 6953110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20470074 - 20470015
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||| | |||   ||||||||| |||||||||||||||||    
T  20470074 aatcccaccgcccacttgcgggggctctgtttaaagccagagc-aagctctgtatggactt 20470015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24999391 - 24999347
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  24999391 aatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 24999347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28193631 - 28193572
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||  |||||||||||   ||||||||| |||||||||||||||||    
T  28193631 aatcccaccgcccacttgtaggggccccgtttaaagccagagc-aagctctgtatggactt 28193572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42643162 - 42643221
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||| |||||||   || |||||| |||||||||||||||||    
T  42643162 aatcccaccgcccacttgcggggcccccgtttcaagacagagc-aagctctgtatggactt 42643221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 22200617 - 22200664
Alignment:
Q  14 acttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||    
T  22200617 acttgcaggggctccgttctaagccagagcaaagctctgtatgaactt 22200664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13579947 - 13580009
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgc 63  Q
    |||| ||||| ||||||| |||||| ||||||| ||| |||||||||||| ||||| ||||||    
T  13579947 aatctcaccgtccacttgtgggggctccgttctaagctagagcaaagctcggtatgaacttgc 13580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19471767 - 19471707
Alignment:
Q  1 aatcccaccgcccacttgcg-ggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| |||||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  19471767 aatcccatcgcccacttgcggggggccccgtttaaagccagagc-aagctctgtatggactt 19471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19542691 - 19542631
Alignment:
Q  1 aatcccaccgcccacttgcg-ggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| |||||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  19542691 aatcccatcgcccacttgcggggggccccgtttaaagccagagc-aagctctgtatggactt 19542631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19590005 - 19590065
Alignment:
Q  1 aatcccaccgcccacttgc-gggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| ||||||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  19590005 aatcccatcgcccacttgcggggggccccgtttaaagccagagc-aagctctgtatggactt 19590065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10292211 - 10292167
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||||||||||||||||| ||||||||||||   |||||||||||    
T  10292211 aatcccaccgcccacttgtgggggccccgtttaaagccagagcaa 10292167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28088443 - 28088384
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||| |||||| ||   || |||||| |||||||||||||||||    
T  28088443 aatcccaccgcccacttgcggaggccccatttaaagtcagagc-aagctctgtatggactt 28088384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42328161 - 42328102
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| || ||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  42328161 aatcccatcgtccacttgtgggggccccgtttaaagccagagc-aagctctgtatggactt 42328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9208405 - 9208340
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||||||||||||||||| ||   ||||| ||||| ||||||||||||||||||||    
T  9208405 aatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatggacttgccca 9208340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11449024 - 11448965
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  11449024 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 11448965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17225819 - 17225756
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccc 65  Q
    |||||||||||||| |||||||| ||||||||| | | |||||||||||||||||||||||||||    
T  17225819 aatcccaccgcccatttgcgggg-ccccgttctaaacgagagcaaagctctgtatggacttgccc 17225756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21982364 - 21982423
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  21982364 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 21982423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 654190 - 654249
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||| ||||||||   ||||||||| |||||||||||||||||    
T  654190 aatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatggactt 654249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12390578 - 12390519
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||||| |||   ||||||||| |||||||||||||||||    
T  12390578 aatcccaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatggactt 12390519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15360142 - 15360201
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||| ||||||||||||||||   ||||||||| |||||||||||||||||    
T  15360142 aatcccaccgcccatttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 15360201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34147499 - 34147440
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  34147499 aatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatggactt 34147440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34160115 - 34160056
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  34160115 aatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatggactt 34160056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 10377865 - 10377803
Alignment:
Q  5 ccaccgcccacttgcggggg-ccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||| ||||| ||||||| | || |||||||||||| ||||||||||||||||    
T  10377865 ccaccgcccacttgtggggggccccgttttaagtcagagcaaagctatgtatggacttgccca 10377803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17081098 - 17081157
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||| ||   || |||||| |||||||||||||||||    
T  17081098 aatcccaccgcccacttgcgggggccccatttaaagtcagagc-aagctctgtatggactt 17081157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17149500 - 17149563
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgcc 64  Q
    ||||||||||  |||||||||||||||| ||   ||||| ||||| ||||||||||||||||||    
T  17149500 aatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatggacttgcc 17149563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14504126 - 14504191
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||||||||||||||||| |||| ||   | |||||||||| | |||||||||||| ||||    
T  14504126 aatcccaccgcccacttgcggggaccccatttaaaaccagagcaaaacactgtatggacttaccca 14504191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1345088 - 1345029
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||||||||| ||||||   ||||||||| ||||| |||||||||||    
T  1345088 aatcccaccgtccacttgcggggggcccgtttaaagccagagc-aagctttgtatggactt 1345029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3222680 - 3222738
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||| |||||||||||   || |||||| |||||||||||||||||    
T  3222680 aatcccaccgcccacttgc-ggggccccgtttaaagacagagc-aagctctgtatggactt 3222738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 3419276 - 3419312
Alignment:
Q  30 ttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||| |||||||||||||||||||||| |||||||||    
T  3419276 ttctaagccagagcaaagctctgtatgaacttgccca 3419312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9239128 - 9239069
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||| ||   ||||| ||| ||||||| |||||||||    
T  9239128 aatcccaccgcccacttgcgggggccccatttaaagccaaagc-aagctctatatggactt 9239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9690682 - 9690741
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||| | ||||||||||   ||||||||| |||||||||||||||||    
T  9690682 aatcccaccgtccacttgtgagggccccgtttaaagccagagc-aagctctgtatggactt 9690741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9844091 - 9844032
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| ||||||||||||| ||||||||||||   ||||||| | |||||||||||||||||    
T  9844091 aatctcaccgcccacttgagggggccccgtttaaagccagaac-aagctctgtatggactt 9844032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 11007318 - 11007290
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccg 29  Q
    |||||||||||||||||||||||||||||    
T  11007318 aatcccaccgcccacttgcgggggccccg 11007290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21148555 - 21148613
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||| |||||||||||   || |||||| |||||||||||||||||    
T  21148555 aatcccaccgcccacttgc-ggggccccgtttaaagtcagagc-aagctctgtatggactt 21148613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9646260 - 9646325
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||| |||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||    
T  9646260 aatcccactgcccacttgcggtggcccggttctaagccagagcaaagcactgtatgaacttgccca 9646325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32990588 - 32990529
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  32990588 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 32990529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34844802 - 34844861
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  34844802 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 34844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40058896 - 40058955
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  40058896 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 40058955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 52983772 - 52983713
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  52983772 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 52983713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19660576 - 19660635
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||||| |||   ||||||||| |||||||||||||||||    
T  19660576 aatcccaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatggactt 19660635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20078028 - 20078087
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||| |||||||||||||   ||||||||| |||||||||||||||||    
T  20078028 aatcccaccgcccacttacgggggccccgtttaaagccagagc-aagctctgtatggactt 20078087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54127386 - 54127445
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| ||||||||||| |||||    
T  54127386 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatagactt 54127445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5609246 - 5609305
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  5609246 aatcccaccgtccacttgcgggggccccatttaaagccagagc-aagctctgtatggactt 5609305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20566503 - 20566444
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| ||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  20566503 aatcccagcgcccacttgcgggggctccgtttaaagccagagc-aagctctgtatggactt 20566444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27528839 - 27528898
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| |||||||||||||||||||||||||    ||||||||| |||||||||||||||||    
T  27528839 aatctcaccgcccacttgcgggggccccgtataaagccagagc-aagctctgtatggactt 27528898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32986350 - 32986291
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||| ||   || |||||| |||||||||||||||||    
T  32986350 aatcccaccgcccacttgcgggggccccatttaaagtcagagc-aagctctgtatggactt 32986291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33696323 - 33696382
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| ||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  33696323 aatctcaccgcccacttgcgggggccccatttaaagccagagc-aagctctgtatggactt 33696382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34723952 - 34723893
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||| |||||||||||||||||||||   ||||||||| ||||| |||||||||||    
T  34723952 aatcccaccacccacttgcgggggccccgtttaaagccagagc-aagctttgtatggactt 34723893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44343667 - 44343608
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||| ||||||||   || |||||| |||||||||||||||||    
T  44343667 aatcccaccgcccacttgcgggagccccgtttaaagtcagagc-aagctctgtatggactt 44343608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45787748 - 45787807
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| |||||||||||||||| |||   ||||||||| |||||||||||||||||    
T  45787748 aatcccaccgtccacttgcgggggccctgtttaaagccagagc-aagctctgtatggactt 45787807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46714546 - 46714487
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||| || || |||||||||||||||||    
T  46714546 aatcccaccgcccacttgcgggggccccgtttaaagcaagggc-aagctctgtatggactt 46714487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 35674786 - 35674844
Alignment:
Q  2 atcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  35674786 atccaaccgcccacttgcgggggccccgtttaaaggcagagc-aagctctgtatggactt 35674844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33992773 - 33992720
Alignment:
Q  7 accgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||   ||||||||| ||||| |||||||||||    
T  33992773 accgcccacttgcgggggccccgtttaaagccagagc-aagctatgtatggactt 33992720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10125972 - 10125908
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||| |||||||||| ||| |||||||   ||| ||||||||||||||||||| ||||||||    
T  10125972 aatcccactgcccacttgcaggg-ccccgtttaaagctagagcaaagctctgtatggccttgccca 10125908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13716494 - 13716559
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||||||||| |||||| |||   || || ||||||| || |||||||||||||||    
T  13716494 aatcccaccgcccacttgcgagggccctgtttaaagacatagcaaagttccgtatggacttgccca 13716559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 39288987 - 39288947
Alignment:
Q  25 ccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  39288987 ccccgttctaagccagagcaa-gctctgtatggacttgccca 39288947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22488072 - 22488131
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||| ||||||||||||||||   ||||||| | ||||||| |||||||||    
T  22488072 aatcccaccgcccatttgcgggggccccgtttaaagccagaac-aagctctatatggactt 22488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51535774 - 51535711
Alignment:
Q  1 aatcccaccgcccacttgc-gggggccccgttcttagccagagc--aaagctctgtatggactt 61  Q
    ||||||||||||||||||| ||||||||||||   |||||||||   |||||||||||||||||    
T  51535774 aatcccaccgcccacttgctgggggccccgtttaaagccagagctgcaagctctgtatggactt 51535711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53787101 - 53787161
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||| |||||||||| |||||   |||||||||| ||||| | ||||||||    
T  53787101 aatcccaccgcccatttgcgggggctccgtttaaagccagagcatagctccgcatggactt 53787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9926190 - 9926255
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||| || |||||||| |||||||    
T  9926190 aatcccaccgcccagttgcgggggctccgttctaagccagagcaaaactttgtatggatttgccca 9926255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24674546 - 24674487
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  24674546 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 24674487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 1486572 - 1486506
Alignment:
Q  2 atcccaccgcccacttgcggggg--ccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||| |||||||||||||  ||||||||| || |||||||||||||||||||||||| ||||    
T  1486572 atcccaccgtccacttgcgggggggccccgttctaagtcagagcaaagctctgtatggacttaccca 1486506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16539760 - 16539696
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||| ||||||| | ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  16539760 aatcccaccacccacttacaggg-ccccgttctaagccagcgcaaagctctgtatggacttgccca 16539696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16899656 - 16899591
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||| ||||| |||||||| ||||||||||||| | ||||||||||||| |||||||||| |||||    
T  16899656 aatctcaccgtccacttgcaggggccccgttctaaaccagagcaaagctttgtatggactggccca 16899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32729697 - 32729633
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||||||||||||||||| |||| ||   ||||||||| ||||||||||||||||||||||    
T  32729697 aatcccaccgcccacttgcggggaccccatttaaagccagagc-aagctctgtatggacttgccca 32729633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4621281 - 4621340
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||| |||||||   ||||||||| |||||||||||||||||    
T  4621281 aatcccaccgcccacttgcggggaccccgtttaaagccagagc-aagctctgtatggactt 4621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7766771 - 7766830
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  7766771 aatcccaccgcccacttgcgggggccccgtttaaagtcagagc-aagctctgtatggactt 7766830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8077800 - 8077741
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||||| |||   ||||||||| |||||||||||||||||    
T  8077800 aatcccaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatggactt 8077741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17935922 - 17935863
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| |||||||||||||||||||||||   |||||||||||| ||||||||||||||    
T  17935922 aatcccatcgcccacttgcgggggccccgtttaaagccagagcaaa-ctctgtatggactt 17935863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24122176 - 24122117
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||| ||||||||   ||||||||| |||||||||||||||||    
T  24122176 aatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatggactt 24122117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 1138728 - 1138671
Alignment:
Q  5 ccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttg 62  Q
    |||| ||||||||||  |||||| ||||| || |||||||||||||||||||||||||    
T  1138728 ccactgcccacttgcaagggccctgttctaagtcagagcaaagctctgtatggacttg 1138671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 25237037 - 25237098
Alignment:
Q  5 ccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||| |||||||||| ||| || |||| || ||||||||| |||||||||||||||||||    
T  25237037 ccaccgtccacttgcggaggcaccattctaagtcagagcaaaactctgtatggacttgccca 25237098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37047145 - 37047080
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||| ||||||| ||||||||| ||   ||| |||||||||||||||||||||| |||||    
T  37047145 aatcccaccgtccacttgtgggggccccatttaaagctagagcaaagctctgtatggactagccca 37047080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8254796 - 8254840
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  8254796 aatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 8254840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15059446 - 15059505
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| |||||||||||||||||| |||||||   ||||||||| |||||||||||||||||    
T  15059446 aatctcaccgcccacttgcggggaccccgtttaaagccagagc-aagctctgtatggactt 15059505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12876980 - 12877038
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggact 60  Q
    |||||||||| ||||||||||||||||||||   ||| ||||| ||||||||||||||||    
T  12876980 aatcccaccgtccacttgcgggggccccgtttaaagctagagc-aagctctgtatggact 12877038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34778492 - 34778436
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatgga 58  Q
    |||||||||| ||||||||||||||||||||   ||||| |||||| |||||||||||    
T  34778492 aatcccaccgtccacttgcgggggccccgtttaaagccaaagcaaa-ctctgtatgga 34778436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 1095055 - 1095112
Alignment:
Q  11 cccacttgcgggggccccgttcttagccagagc---aaagctctgtatggacttgccca 66  Q
    ||||||||||||| ||||||||| |||||||||   ||||||||||||| |||||||||    
T  1095055 cccacttgcgggg-ccccgttctaagccagagctgcaaagctctgtatgtacttgccca 1095112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9500399 - 9500458
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| ||||||||||||| |||||| |||||   ||||||||| |||||||||||||||||    
T  9500399 aatctcaccgcccacttgtgggggctccgtttaaagccagagc-aagctctgtatggactt 9500458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Original strand, 19034467 - 19034495
Alignment:
Q  38 cagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||||||||||||||||||    
T  19034467 cagagcaaagctctgtatggacttgccca 19034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30677329 - 30677270
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||| ||   ||||| ||| |||||||||||||||||    
T  30677329 aatcccaccgcccacttgcgggggtcccatttaaagccaaagc-aagctctgtatggactt 30677270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2470 - 2529
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  2470 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7353 - 7412
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||    
T  7353 aatcccaccgcccacttgcgggggccccgtttaaagccagag-aaagctctgtatggactt 7412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40478 - 40419
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  40478 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 40419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15641149 - 15641208
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  15641149 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 15641208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32059484 - 32059543
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  32059484 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 32059543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19145456 - 19145520
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||||||||||    
T  19145456 aatcccaccgcccacttgcgggggaccatttaa-agccagagcaaagctctgtatggacttgccca 19145520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24158210 - 24158275
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    |||| |||||||||||||| | ||||||||||| |||||||| |||||| ||||||||||| ||||    
T  24158210 aatctcaccgcccacttgcagaggccccgttctaagccagagtaaagctatgtatggacttaccca 24158275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36895578 - 36895517
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttg 62  Q
    |||||| |||||||||||||| |||  |||||| ||||||||||||||| ||||||||||||    
T  36895578 aatccccccgcccacttgcggcggctacgttctaagccagagcaaagctttgtatggacttg 36895517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8484705 - 8484764
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||| ||||    
T  8484705 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatgaactt 8484764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27498775 - 27498834
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| ||||| |||||||||||    
T  27498775 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctatgtatggactt 27498834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35425166 - 35425107
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   |||||||||  ||||||||||||||||    
T  35425166 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-gagctctgtatggactt 35425107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7085670 - 7085729
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||| |||||||   || |||||| |||||||||||||||||    
T  7085670 aatcccaccgcccacttgcggggaccccgtttaaagtcagagc-aagctctgtatggactt 7085729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18207360 - 18207301
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||| ||||   ||||||| | |||||||||||||||||    
T  18207360 aatcccaccgcccacttgcgggggcctcgtttaaagccagaac-aagctctgtatggactt 18207301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19456255 - 19456313
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  19456255 aatcccaccgcccacttgc-ggggccccgtttaaagccagagc-aagctctgtatggactt 19456313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21236406 - 21236465
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   || ||||| ||| ||||||||||||||    
T  21236406 aatcccaccgcccacttgcgggggccccgtttaaagtcagag-aaaactctgtatggactt 21236465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23290749 - 23290705
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||    
T  23290749 aatctcaccgcccacttgcgggggctccgttctaagccagagcaa 23290705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30485981 - 30485922
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||  ||||   ||||||||| |||||||||||||||||    
T  30485981 aatcccaccgcccacttgcgggggcatcgtttaaagccagagc-aagctctgtatggactt 30485922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34049964 - 34049905
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||| |||| ||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  34049964 aatcctaccgaccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 34049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 13038499 - 13038529
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgtt 31  Q
    |||||||||||||||||||||||||||||||    
T  13038499 aatcccaccgcccacttgcgggggccccgtt 13038529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 13108494 - 13108524
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgtt 31  Q
    |||||||||||||||||||||||||||||||    
T  13108494 aatcccaccgcccacttgcgggggccccgtt 13108524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 22693088 - 22693058
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgtt 31  Q
    |||||||||||||||||||||||||||||||    
T  22693088 aatcccaccgcccacttgcgggggccccgtt 22693058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31287990 - 31288020
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgtt 31  Q
    |||||||||||||||||||||||||||||||    
T  31287990 aatcccaccgcccacttgcgggggccccgtt 31288020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11926545 - 11926605
Alignment:
Q  1 aatcccaccgcccacttgc-gggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||| ||||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  11926545 aatcccaccacccacttgcggggggccccgtttaaagccagagc-aagctctgtatggactt 11926605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4603930 - 4603871
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| |||||||| |||||||||||   |||||||||  ||||||||||||||||    
T  4603930 aatcccaccgtccacttgcaggggccccgtttaaagccagagc-gagctctgtatggactt 4603871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6014324 - 6014383
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||| ||||||||||||||| || |||||||   ||||||||| |||||||||||||||||    
T  6014324 aatctcaccgcccacttgcgtggaccccgtttaaagccagagc-aagctctgtatggactt 6014383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 22392837 - 22392797
Alignment:
Q  5 ccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  22392837 ccaccgcccacttgcgggggccccgtttaaagccagagcaa 22392797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38684360 - 38684302
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||| |||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  38684360 aatcccaccgctcacttgcggggg-cccgtttaaagccagagc-aagctctgtatggactt 38684302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18176931 - 18176990
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  18176931 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 18176990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25289758 - 25289817
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  25289758 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 25289817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34492619 - 34492678
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  34492619 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 34492678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35493064 - 35493005
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  35493064 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 35493005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40133493 - 40133552
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  40133493 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 40133552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53233954 - 53234013
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  53233954 aatcccaccgcccacttgcgggggccccgtttagagccagagc-aagctctgtatggactt 53234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8097323 - 8097382
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| | |||||||||||||||    
T  8097323 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-atgctctgtatggactt 8097382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8456194 - 8456253
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||| ||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  8456194 aatcccactgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 8456253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10190786 - 10190845
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  10190786 aatcccaccgtccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 10190845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21363096 - 21363037
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  21363096 aatcccaccgcccacttgcgggggctccgtttaaagccagagc-aagctctgtatggactt 21363037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25379914 - 25379855
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||| |||||||||||||||||   ||||||||| |||||||||||||||||    
T  25379914 aatcccaccgcccgcttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 25379855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26108445 - 26108386
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||| ||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  26108445 aatcccacagcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 26108386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45272460 - 45272519
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||| ||||||||||    
T  45272460 aatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctccgtatggactt 45272519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45529798 - 45529857
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  45529798 aatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatggactt 45529857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46576501 - 46576442
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  46576501 aatccgaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 46576442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48977541 - 48977482
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  48977541 aatcccaccgcccacttgcaggggccccgtttaaagccagagc-aagctctgtatggactt 48977482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49258306 - 49258365
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  49258306 aatcccaccgcccacttgtgggggccccgtttaaagccagagc-aagctctgtatggactt 49258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26158964 - 26158922
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagc 43  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  26158964 aatcccaccgcccacttgcgggggctccgttctaagccagagc 26158922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33398512 - 33398569
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggac 59  Q
    |||||||||||||||||||||||||||||||   ||| ||||| |||||||||||||||    
T  33398512 aatcccaccgcccacttgcgggggccccgtttaaagctagagc-aagctctgtatggac 33398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 1242122 - 1242067
Alignment:
Q  5 ccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||  |||||||   |||||||||||||||||||||||||||    
T  1242122 ccaccgcccacttgcggga-ccccgtttaaagccagagcaaagctctgtatggactt 1242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10083863 - 10083922
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  10083863 aatcccaccgtccacttgtgggggccccgtttaaagccagagc-aagctctgtatggactt 10083922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15566544 - 15566602
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  15566544 aatcccaccgcccacttgcggggg-cccgtttaaagccagagc-aagctctgtatggactt 15566602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24165759 - 24165817
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  24165759 aatcccaccgcccacttgc-ggggccccgtttaaagccagagc-aagctctgtatggactt 24165817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25344101 - 25344160
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||| |||||||| ||||||||||||||   |||||||||||| ||||||||||||||    
T  25344101 aatcccatcgcccactagcgggggccccgtttaaagccagagcaaa-ctctgtatggactt 25344160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26174266 - 26174207
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||  ||   ||||||||| |||||||||||||||||    
T  26174266 aatcccaccgcccacttgcgggggccctatttaaagccagagc-aagctctgtatggactt 26174207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30257773 - 30257718
Alignment:
Q  5 ccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  30257773 ccaccgcccacttgcgggggccccatttaaagccagagc-aagctctgtatggactt 30257718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39041896 - 39041955
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||| |||||||||||||||||||||   ||||||||| |||||||| ||||||||    
T  39041896 aatcccaccacccacttgcgggggccccgtttaaagccagagc-aagctctgcatggactt 39041955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32151577 - 32151523
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatg 56  Q
    |||| ||||||||||||||||||||||||||   ||||||||| ||||||||||||    
T  32151577 aatctcaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 32151523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 54475834 - 54475777
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggac 59  Q
    ||||||||||||||||||||| |||||||||   ||||| ||| |||||||||||||||    
T  54475834 aatcccaccgcccacttgcggtggccccgtttaaagccaaagc-aagctctgtatggac 54475777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 55371338 - 55371380
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagc 43  Q
    |||||||||||||||||||| |||||||||| | |||||||||    
T  55371338 aatcccaccgcccacttgcgagggccccgttttaagccagagc 55371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1178324 - 1178260
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttgccca 66  Q
    ||||||||||||||| || |||| |||| ||   ||||||||||||| ||||||||||||||||||    
T  1178324 aatcccaccgcccacgtgtgggg-ccccatttaaagccagagcaaagttctgtatggacttgccca 1178260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4252440 - 4252501
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggacttg 62  Q
    |||||||||| ||||||| |||||  ||||||| | |||||| |||||| ||||||||||||    
T  4252440 aatcccaccgtccacttgtgggggggccgttctaaaccagagtaaagctttgtatggacttg 4252501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30807196 - 30807256
Alignment:
Q  1 aatcccaccgcccacttgc-gggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||| ||||||||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  30807196 aatcctaccgcccacttgcggggggccccgtttaaagccagagc-aagctctgtatggactt 30807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30695289 - 30695358
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccag----agcaaagctctgtatggacttgccca 66  Q
    ||||||| ||||||||||||  ||| ||||||| ||||||    ||||||||||||||| ||||||||||    
T  30695289 aatcccatcgcccacttgcgaaggcaccgttctaagccagccgaagcaaagctctgtatagacttgccca 30695358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52821680 - 52821738
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||||| | |||||||||||   ||||||||| |||||||||||||||||    
T  52821680 aatcccaccgcccacttac-ggggccccgtttaaagccagagc-aagctctgtatggactt 52821738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5126 - 5185
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||| ||||||||||||||||   ||||||||| |||||||||||||||||    
T  5126 aatcccaccgcccatttgcgggggccccgtttaaagccagagc-aagctctgtatggactt 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 161962 - 161903
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  161962 aatcccaccgcccacttgcgggggccccattaaaagccagagc-aagctctgtatggactt 161903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1100 - 1159
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  1100 aatcccaccgtccacttgcgggggccccatttaaagccagagc-aagctctgtatggactt 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9343 - 9402
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||| ||||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  9343 aatcccaccgtccacttgcgggggccccatttaaagccagagc-aagctctgtatggactt 9402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 66907 - 66863
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaa 45  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  66907 aatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 66863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 97410 - 97469
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||||||||||||||||||| ||||||   || |||||| |||||||||||||||||    
T  97410 aatcccaccgcccacttgcgggggtcccgtttaaagtcagagc-aagctctgtatggactt 97469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 39245 - 39215
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgtt 31  Q
    |||||||||||||||||||||||||||||||    
T  39245 aatcccaccgcccacttgcgggggccccgtt 39215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52915 - 52971
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatgga 58  Q
    ||||| ||||||||| |||||||||||||||   ||||||||| ||||||||||||||    
T  52915 aatcctaccgcccacctgcgggggccccgtttaaagccagagc-aagctctgtatgga 52971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2 - 61
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||||||||| || ||||||||||||   ||| |||||||| ||||||||||||||    
T  2 aatcccaccgcccacatgtgggggccccgtttaaagctagagcaaa-ctctgtatggactt 61  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41688 - 41747
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    |||||||  |||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  41688 aatcccattgcccacttgcaggggccccgtttaaagccagagc-aagctctgtatggactt 41747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32441 - 32382
Alignment:
Q  1 aatcccaccgcccacttgcgggggccccgttcttagccagagcaaagctctgtatggactt 61  Q
    ||||||||| |||||||||||||||| | ||   ||||||||| |||||||||||||||||    
T  32441 aatcccaccacccacttgcgggggccacatttaaagccagagc-aagctctgtatggactt 32382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University