View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15464_low_10 (Length: 290)
Name: NF15464_low_10
Description: NF15464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15464_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 32850859 - 32851118
Alignment:
| Q |
16 |
caataagttcctccacaaggtttcaagatgctaagcatcttcgccatcactcatgctgacatgactatcgatataaaactccgttgaggaatcaacatcg |
115 |
Q |
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| T |
32850859 |
caataagttactccacaaggtttcaagatgctaagcatcttcgccatcactcatgctgacatgactatcgatataaaactccgttgaggaatcaacatcg |
32850958 |
T |
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| Q |
116 |
tcaacaatccttcctctgttgtatgtatcaacatatgcaagatatgcacgataagtgttaaacactagatacaatgtgtaactaatttgttttaaccaag |
215 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32850959 |
tcaacaatccttcctctgttgtttgtatcaacatatgcaagatatgcacgataagtgttaaacactagatacaatgtgtaactaaattgttttaaccaag |
32851058 |
T |
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| Q |
216 |
atatagtgactacataatatgaaaataacaaaatacctttcaagaacaaacttcccttcc |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32851059 |
atatagtgactacataatatgaaaataacaaaatacctttcaagaacaaacttcccttcc |
32851118 |
T |
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