View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15464_low_13 (Length: 219)
Name: NF15464_low_13
Description: NF15464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15464_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 11028573 - 11028773
Alignment:
| Q |
1 |
tcttaaagagagtctgctgctctcacatgaaaagagcagccaccatataacgaaaaaccacccgacctaaaataaccaaaacaggatattacgagactga |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11028573 |
tcttaaagagagtctgctgctctcgcatgaaaagagcagccaccatataacgaaaaaccacccgacctaaaataaccaaaacaggatattacgagactga |
11028672 |
T |
|
| Q |
101 |
aaattgcagcaagatacaattatcaactcagcaaagccttgagacagtcacagcaaaataacaccaaccgctctgactccttgtacgtgggacgtagact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
11028673 |
aaattgcagcaagatacaattatcaactcagcaaagccttgagacagtcacagcaaaataacaccaaccgctctgactccttgtacgtgggacgttgact |
11028772 |
T |
|
| Q |
201 |
c |
201 |
Q |
| |
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| |
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|
| T |
11028773 |
c |
11028773 |
T |
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