View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15465_high_37 (Length: 401)
Name: NF15465_high_37
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15465_high_37 |
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Alignment Details
Target: chr8 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 3464547 - 3464936
Alignment:
| Q |
1 |
agacagtcaagtcggtgttgtgtgaattttatacaacaatacgtaatttactttatatagaaacttgaccaagactttatcttggttcttcattcagtgc |
100 |
Q |
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| T |
3464547 |
agacagtcaagtcggtgttgtgtgaattttatacaacaatacgtaatttactttatatagaaacttgaccaagactttatcttggttcttcattcagtgc |
3464646 |
T |
|
| Q |
101 |
tggaatacattcatgttttaggttacacttgccgtgaatcactcatatggtctcaattcacagttgtacaccttttcttttcggaaaccttattgaaaaa |
200 |
Q |
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| T |
3464647 |
tggaatacattcatgttttaggttacacttgccgtgaatcacacatatggtctcaattcacagttgtacaccttttcttttcggaaaccttattgaaaaa |
3464746 |
T |
|
| Q |
201 |
tgttagtcgatttgggcgataaattgctaagggacgacgcgttcattttgtgtcaggtgtgtgttgttcgtcgtcttatagagtttgagtgtttgtcgtc |
300 |
Q |
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| T |
3464747 |
tgttaatcgatttgggcgataaattgctaagggacaacgcgttcattttgtgtcaggtgtgtgttgttcgtcgtcttgtagagtttgagtgtctgtcgtc |
3464846 |
T |
|
| Q |
301 |
tcgtaatatccatgacttaaatgaattaaatagaacatgatgtaaattaatcataaataaactctgtttcgtagtatctaactagttctt |
390 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
3464847 |
tcgtaatatccatgacttaaatgaattaaatagaacatgatgtaaattaatcataaataaactctttttcgtagtatctaactagttctt |
3464936 |
T |
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