View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15465_high_81 (Length: 258)
Name: NF15465_high_81
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15465_high_81 |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 15037519 - 15037313
Alignment:
| Q |
19 |
atttcctacctatatttgcaataaacaaaaatactttaaaatttcatattttcttactcataacatgtatcttactacaattattcatatcattgtgaga |
118 |
Q |
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| T |
15037519 |
atttcctacctatatttgcaataaacaaaaatactttaaaatttcatattttcttactcataacatttatcttactacaattattcatatcattgtgatg |
15037420 |
T |
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| Q |
119 |
cttgtttctaccttaatgataataaaaataaatatgatacttactttttagaaggaatgtgctaaattatttcta--atgatcgtttcaaacactttcag |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
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| T |
15037419 |
cttgtttctaccttaatgataataaaaataaatatgatacttactttttagaaggaatgtgctaaattatttctaatatgatcgtttcaaacacttttag |
15037320 |
T |
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| Q |
217 |
cattagt |
223 |
Q |
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||||||| |
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| T |
15037319 |
cattagt |
15037313 |
T |
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