View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15465_high_85 (Length: 252)
Name: NF15465_high_85
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15465_high_85 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 233
Target Start/End: Complemental strand, 30192805 - 30192580
Alignment:
| Q |
8 |
agagaagaaacaagacataattaataaggagaaaagaaaccaaccacaaaaattagatacaatcaatggcaaaacaagatgaacgacttcaattgaacat |
107 |
Q |
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| T |
30192805 |
agagaagaaacaagacataattaataaggagaaaagaaaccaaccacaaaaattagatacaatcaatggcaaaacaagatgaacgacttcaattgaacat |
30192706 |
T |
|
| Q |
108 |
ttatgtattatattgatttgagaaaaattaaatcacaacgaattacccttatatatcatataactagatcagcgtgacaaaccaaataaattataacaat |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
30192705 |
ttatgtattatattgatttgagaaaaattaaatcacaacgaattacccttatatatcatataaccagatcagcgtgacaaaccaaataaattataacaat |
30192606 |
T |
|
| Q |
208 |
gaaagagaggctagaagagacgtgtg |
233 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
30192605 |
gaaagagaggctagaagagacgtgtg |
30192580 |
T |
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