View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15465_low_112 (Length: 225)
Name: NF15465_low_112
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15465_low_112 |
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Alignment Details
Target: chr4 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 52070961 - 52071150
Alignment:
| Q |
17 |
gaagtgaaataatgaaggttgttagtcacatttttctcatcaacaaagctacattctgtccagttcttgagaatctcatccgaaaacataggagtctggt |
116 |
Q |
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| T |
52070961 |
gaagtaaaataatgaaggttgttagtcacatttttctcatcaacaaaactacattctgtccagttcttgagaatctcatccgaaaacataggagtctggt |
52071060 |
T |
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| Q |
117 |
cagaacaaggtgacaataactcattgtaatcaaaattgcatgcagttgaaaaatccgagttcaaaagttcggataagctaatatcatgat |
206 |
Q |
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| T |
52071061 |
cagaacaaggtgacaataactcattgtaatcaaaattgcatgcagttgaaaaatccgagttcaaaagttcggataagctaatatcatgat |
52071150 |
T |
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