View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15465_low_24 (Length: 489)
Name: NF15465_low_24
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15465_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 21 - 473
Target Start/End: Original strand, 2636610 - 2637062
Alignment:
| Q |
21 |
aaaaaagtgtagggtagttactagttatgttccaagttttattttattttatctagaggtagttatttttataggtagttatgttccaagttgcatagca |
120 |
Q |
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| T |
2636610 |
aaaacagtgtagggtagttactagttatgttccaagttttattttattttatctagaggtagttatttttataggtagttatgttccaagttgcatagca |
2636709 |
T |
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| Q |
121 |
ttatcaaaataaattaaatgcataatgtagaccgtacgatcagatctcatgtggctcacatcactgatgataatgaaccgacaccacgtgtcagataatt |
220 |
Q |
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| T |
2636710 |
ttataaaaataaattaaatgcataatgtagaccgtacgatcagatctcatgtggctcacatcactgatgataatgaaccgacaccacgtgtcagatagtt |
2636809 |
T |
|
| Q |
221 |
gtttgtcaaaataaggacaactctttagtaatgggtgtacccaataaatgtttcacccaaaccccattcacattcattactctataaataccctacattc |
320 |
Q |
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| T |
2636810 |
gtttgtcaaaataaggacaactctttagtaatgggtgtacccaataaatgtttcacccaaaccccattcacattcattactctataaataccctacattc |
2636909 |
T |
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| Q |
321 |
attctaacttgatcccacatctcctcattaatatctcatttggttctctcttacctacaaagagagtttttccaaatctagaggtgctacaatggccatg |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2636910 |
attctaacttgatcccacatctcctcattaatatctcatttggttctctcttacctacaaagagagtttttccaaatctagaggtgctacaatggccatg |
2637009 |
T |
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| Q |
421 |
actaagttctttgcttctttcatcttagcactcattgcaatttccatgcttca |
473 |
Q |
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| T |
2637010 |
actaagttctttgcttctttgatcttagcactcattgcaatttccatgcttca |
2637062 |
T |
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