View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15465_low_27 (Length: 480)
Name: NF15465_low_27
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15465_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 447; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 1 - 455
Target Start/End: Complemental strand, 37135566 - 37135112
Alignment:
| Q |
1 |
acgagcttcaagaccggtgagaacaaaaatgccggaaccgacaactgcaccgattccgaaccaaataagatcccaaccattcagagttttcttcatttgg |
100 |
Q |
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| T |
37135566 |
acgagcttcaagaccggtgagaacaaaaatgccggaaccgacaactgcgccgattccgaaccaaataagatcccaaccattcagagttttcttcatttgg |
37135467 |
T |
|
| Q |
101 |
tggctgcttctagctttcatctccacaatttccatgtaatcttttgatcgtgtaaacattctatctttcaacctgtatggtgttttcatgaatgcttttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37135466 |
tggctgcttctagctttcatctccacaatttccatgtaatcttttgatcgtgtaaacattctatctttcaacctgtatggtgttttcatgaatgcttttc |
37135367 |
T |
|
| Q |
201 |
cataatcacctaaacttttgaatgaatcttctgggaaaaactcatttcttgctccactgttttctgttcccatgtcctgattcatataatttaatttgat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37135366 |
cataatcacctaaacttttgaatgaatcttctgggaaaaactcatttcttgctccactgttttctgttcccatgtcctgattcatataatttaatttgat |
37135267 |
T |
|
| Q |
301 |
caatgcaacaacatgcaatgctgttgtaaaaatataatatagtttaaaccaatcttaagagtctataggggagaacaagaattaatatgtgtatgtgcta |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37135266 |
caatgcaacaacatgcaatgctgttgtaaaaatataatatagtttaaaccaatcttaagagtctataggggagaacaagaattaatatgtgtatgtgcta |
37135167 |
T |
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| Q |
401 |
tgagagaatgtgtgtggaatctcttttgagagtgtgagattcttgtgtaatttat |
455 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37135166 |
tgagagaatgtgtgtggaatctattttgagagtgtgagattcttgtgtaatttat |
37135112 |
T |
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