View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15465_low_73 (Length: 296)

Name: NF15465_low_73
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15465_low_73
NF15465_low_73
[»] chr6 (25 HSPs)
chr6 (156-293)||(5334503-5334640)
chr6 (117-241)||(5351834-5351957)
chr6 (117-229)||(5100512-5100625)
chr6 (117-227)||(5398510-5398615)
chr6 (117-241)||(5242145-5242268)
chr6 (47-118)||(5334630-5334701)
chr6 (117-229)||(5135613-5135726)
chr6 (153-241)||(5687575-5687661)
chr6 (175-248)||(5155768-5155839)
chr6 (197-241)||(5255884-5255928)
chr6 (184-241)||(5180539-5180596)
chr6 (67-110)||(13114393-13114436)
chr6 (184-230)||(23127164-23127210)
chr6 (66-106)||(10344049-10344089)
chr6 (66-105)||(29942461-29942500)
chr6 (47-105)||(8237975-8238033)
chr6 (66-104)||(14585348-14585386)
chr6 (47-105)||(31851758-31851816)
chr6 (67-108)||(3593591-3593632)
chr6 (70-107)||(14328668-14328705)
chr6 (70-107)||(14421678-14421715)
chr6 (75-108)||(24387788-24387821)
chr6 (67-103)||(13114644-13114680)
chr6 (66-106)||(13639508-13639548)
chr6 (61-93)||(26141486-26141518)
[»] chr3 (35 HSPs)
chr3 (128-241)||(47985062-47985175)
chr3 (128-241)||(47994349-47994462)
chr3 (128-241)||(48003636-48003749)
chr3 (128-241)||(48012921-48013034)
chr3 (47-108)||(47115561-47115622)
chr3 (65-105)||(27497799-27497839)
chr3 (47-107)||(49880736-49880796)
chr3 (47-105)||(5205116-5205175)
chr3 (47-105)||(5205353-5205412)
chr3 (47-108)||(7118084-7118146)
chr3 (47-105)||(36867856-36867914)
chr3 (47-105)||(49872949-49873006)
chr3 (61-102)||(8827438-8827479)
chr3 (47-104)||(29313789-29313846)
chr3 (48-93)||(35460657-35460702)
chr3 (65-105)||(6510215-6510255)
chr3 (47-103)||(14154782-14154837)
chr3 (65-105)||(20737510-20737550)
chr3 (50-105)||(34314848-34314904)
chr3 (61-105)||(37050018-37050062)
chr3 (47-105)||(30586162-30586221)
chr3 (65-115)||(14248831-14248881)
chr3 (65-103)||(22949248-22949286)
chr3 (67-105)||(48044747-48044785)
chr3 (67-105)||(51460782-51460820)
chr3 (47-107)||(3526537-3526598)
chr3 (65-102)||(5417283-5417320)
chr3 (47-88)||(13041380-13041421)
chr3 (47-88)||(13049457-13049498)
chr3 (48-105)||(14241214-14241271)
chr3 (65-110)||(23626254-23626299)
chr3 (67-108)||(26769918-26769959)
chr3 (70-107)||(54567765-54567802)
chr3 (75-111)||(38344412-38344448)
chr3 (47-106)||(52839297-52839357)
[»] scaffold0031 (1 HSPs)
scaffold0031 (47-106)||(1826-1885)
[»] chr7 (29 HSPs)
chr7 (47-108)||(38193193-38193254)
chr7 (66-109)||(19979647-19979690)
chr7 (47-104)||(13797610-13797667)
chr7 (66-105)||(24555919-24555958)
chr7 (65-108)||(39580183-39580226)
chr7 (48-106)||(3951602-3951660)
chr7 (47-107)||(5864442-5864503)
chr7 (67-108)||(13279436-13279477)
chr7 (67-104)||(21298015-21298052)
chr7 (65-110)||(31534176-31534221)
chr7 (61-105)||(6269528-6269572)
chr7 (61-105)||(32946286-32946330)
chr7 (49-105)||(35158501-35158557)
chr7 (65-108)||(3307693-3307736)
chr7 (47-106)||(5766637-5766696)
chr7 (47-105)||(20041134-20041193)
chr7 (67-106)||(23371448-23371487)
chr7 (47-102)||(39065386-39065440)
chr7 (66-108)||(5909710-5909752)
chr7 (47-105)||(9915651-9915708)
chr7 (47-105)||(9923563-9923620)
chr7 (47-105)||(12005264-12005322)
chr7 (48-105)||(13797416-13797474)
chr7 (67-105)||(19272468-19272506)
chr7 (47-105)||(24478024-24478081)
chr7 (67-105)||(48945184-48945222)
chr7 (47-108)||(2300819-2300880)
chr7 (68-105)||(23784584-23784621)
chr7 (67-107)||(48104747-48104787)
[»] scaffold0142 (1 HSPs)
scaffold0142 (47-107)||(34826-34885)
[»] chr2 (31 HSPs)
chr2 (47-106)||(28149666-28149724)
chr2 (47-105)||(17328092-17328150)
chr2 (47-105)||(34635706-34635764)
chr2 (47-105)||(38128078-38128136)
chr2 (65-105)||(6468058-6468098)
chr2 (47-106)||(19641445-19641504)
chr2 (47-106)||(19840038-19840097)
chr2 (48-103)||(32449689-32449744)
chr2 (67-105)||(3364580-3364618)
chr2 (67-108)||(29835099-29835140)
chr2 (47-104)||(38210865-38210922)
chr2 (65-105)||(37147551-37147591)
chr2 (66-105)||(19052191-19052230)
chr2 (65-108)||(20182511-20182554)
chr2 (67-106)||(22846012-22846051)
chr2 (54-105)||(27866194-27866245)
chr2 (65-104)||(38385936-38385975)
chr2 (67-105)||(776611-776649)
chr2 (67-105)||(3364327-3364365)
chr2 (67-105)||(19493467-19493505)
chr2 (67-105)||(20182264-20182302)
chr2 (67-105)||(22116155-22116193)
chr2 (47-105)||(38127763-38127821)
chr2 (66-108)||(43301877-43301919)
chr2 (67-105)||(45464630-45464668)
chr2 (48-105)||(758745-758802)
chr2 (65-105)||(18555576-18555617)
chr2 (66-103)||(30371614-30371651)
chr2 (67-108)||(33641129-33641170)
chr2 (47-106)||(5513482-5513542)
chr2 (66-102)||(29098022-29098058)
[»] scaffold0769 (1 HSPs)
scaffold0769 (47-105)||(4150-4208)
[»] chr8 (28 HSPs)
chr8 (47-105)||(12936167-12936225)
chr8 (47-105)||(29309565-29309623)
chr8 (65-105)||(4482045-4482085)
chr8 (65-105)||(29309791-29309831)
chr8 (67-115)||(43945159-43945207)
chr8 (65-108)||(27543642-27543685)
chr8 (67-105)||(39451505-39451543)
chr8 (65-106)||(960514-960555)
chr8 (54-105)||(24970963-24971015)
chr8 (65-105)||(25277723-25277763)
chr8 (47-106)||(32684560-32684620)
chr8 (67-110)||(2873784-2873827)
chr8 (67-105)||(4482299-4482338)
chr8 (58-105)||(6952912-6952959)
chr8 (66-105)||(34985340-34985379)
chr8 (66-105)||(43400671-43400710)
chr8 (73-111)||(1600071-1600109)
chr8 (47-105)||(12330333-12330391)
chr8 (67-105)||(14329619-14329657)
chr8 (47-108)||(25277469-25277531)
chr8 (66-108)||(29726103-29726145)
chr8 (47-105)||(34227327-34227385)
chr8 (47-105)||(38711939-38711997)
chr8 (65-103)||(40652621-40652659)
chr8 (47-104)||(8315982-8316038)
chr8 (47-88)||(18367259-18367300)
chr8 (65-105)||(9513828-9513868)
chr8 (67-107)||(16009865-16009904)
[»] chr5 (28 HSPs)
chr5 (47-105)||(11721583-11721641)
chr5 (47-105)||(22642321-22642380)
chr5 (54-105)||(29104444-29104495)
chr5 (47-105)||(10976747-10976804)
chr5 (65-109)||(2870901-2870945)
chr5 (47-107)||(12399585-12399645)
chr5 (67-110)||(12823732-12823775)
chr5 (47-106)||(36992982-36993041)
chr5 (47-109)||(39418950-39419013)
chr5 (47-105)||(12148225-12148283)
chr5 (47-108)||(16504716-16504778)
chr5 (47-105)||(17886020-17886078)
chr5 (47-105)||(21039865-21039923)
chr5 (67-105)||(22551522-22551560)
chr5 (47-108)||(26524619-26524681)
chr5 (47-104)||(33658871-33658929)
chr5 (47-115)||(11721255-11721324)
chr5 (67-108)||(30916480-30916521)
chr5 (66-110)||(31861744-31861789)
chr5 (47-108)||(31920057-31920118)
chr5 (65-106)||(34648727-34648768)
chr5 (47-88)||(41123161-41123202)
chr5 (65-105)||(4413927-4413967)
chr5 (47-106)||(6897101-6897161)
chr5 (65-105)||(8855699-8855739)
chr5 (47-103)||(24329516-24329572)
chr5 (65-105)||(31861491-31861531)
chr5 (70-106)||(34407915-34407951)
[»] chr4 (29 HSPs)
chr4 (47-105)||(24215740-24215798)
chr4 (47-105)||(32682488-32682546)
chr4 (61-105)||(37273408-37273452)
chr4 (66-105)||(50727590-50727629)
chr4 (66-105)||(50735604-50735643)
chr4 (47-105)||(11563516-11563574)
chr4 (47-105)||(16493518-16493576)
chr4 (67-105)||(22272930-22272968)
chr4 (47-108)||(21798565-21798625)
chr4 (47-104)||(27579743-27579800)
chr4 (47-108)||(49300734-49300795)
chr4 (65-105)||(20125435-20125475)
chr4 (65-105)||(35539797-35539837)
chr4 (67-106)||(550672-550711)
chr4 (47-105)||(18454192-18454251)
chr4 (56-103)||(27579516-27579563)
chr4 (47-106)||(46094239-46094298)
chr4 (66-105)||(51396159-51396198)
chr4 (75-105)||(9001444-9001474)
chr4 (61-107)||(20125216-20125262)
chr4 (67-105)||(21780122-21780160)
chr4 (47-105)||(31226498-31226556)
chr4 (67-105)||(50138488-50138526)
chr4 (65-106)||(51965371-51965412)
chr4 (65-105)||(2032748-2032788)
chr4 (47-106)||(5401997-5402056)
chr4 (61-105)||(18509983-18510027)
chr4 (65-105)||(29104159-29104199)
chr4 (65-105)||(50773621-50773661)
[»] scaffold0022 (1 HSPs)
scaffold0022 (47-108)||(63348-63409)
[»] chr1 (33 HSPs)
chr1 (47-108)||(5330417-5330478)
chr1 (47-105)||(5932279-5932337)
chr1 (47-105)||(22604661-22604719)
chr1 (47-105)||(24987608-24987665)
chr1 (70-108)||(51470126-51470164)
chr1 (47-108)||(5348160-5348221)
chr1 (48-105)||(13545579-13545636)
chr1 (54-107)||(35034301-35034354)
chr1 (66-111)||(47021831-47021876)
chr1 (67-107)||(7112492-7112532)
chr1 (65-105)||(18458819-18458859)
chr1 (47-107)||(42736821-42736880)
chr1 (48-108)||(44826078-44826138)
chr1 (66-105)||(10027995-10028034)
chr1 (66-105)||(30659426-30659465)
chr1 (67-105)||(4646757-4646795)
chr1 (66-104)||(7112739-7112777)
chr1 (47-105)||(16698869-16698927)
chr1 (47-105)||(28797360-28797418)
chr1 (67-105)||(47022088-47022126)
chr1 (67-108)||(15336372-15336413)
chr1 (66-103)||(21853418-21853455)
chr1 (47-108)||(21853557-21853618)
chr1 (47-104)||(27265704-27265761)
chr1 (67-108)||(46136083-46136124)
chr1 (67-104)||(47220913-47220950)
chr1 (66-102)||(2059444-2059480)
chr1 (73-105)||(8928815-8928847)
chr1 (48-92)||(13738462-13738506)
chr1 (47-103)||(21853998-21854054)
chr1 (67-111)||(28410908-28410952)
chr1 (67-99)||(29018615-29018647)
chr1 (64-92)||(40091720-40091748)
[»] scaffold0384 (1 HSPs)
scaffold0384 (67-110)||(4446-4489)
[»] scaffold0095 (1 HSPs)
scaffold0095 (67-105)||(10355-10393)
[»] scaffold0032 (1 HSPs)
scaffold0032 (47-105)||(91050-91107)
[»] scaffold0092 (1 HSPs)
scaffold0092 (48-104)||(44392-44447)
[»] scaffold0010 (1 HSPs)
scaffold0010 (67-107)||(26306-26346)
[»] scaffold0740 (1 HSPs)
scaffold0740 (47-106)||(3646-3704)
[»] scaffold0450 (2 HSPs)
scaffold0450 (66-105)||(7859-7898)
scaffold0450 (66-110)||(8113-8157)
[»] scaffold1122 (1 HSPs)
scaffold1122 (47-107)||(290-350)


Alignment Details
Target: chr6 (Bit Score: 134; Significance: 9e-70; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 5334640 - 5334503
Alignment:
Q  156 attagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaaatggaaaacaattgatttgctcagccac 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5334640 attagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaaatggaaaacaattgatttgctcagccac 5334541  T
Q  256 cgatgacttttaccatctttcatagattcatttcactc 293  Q
    |||||||||||||||||||||||||||||||| |||||    
T  5334540 cgatgacttttaccatctttcatagattcattccactc 5334503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 5351957 - 5351834
Alignment:
Q  117 ttaaatggtacatgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaac 216  Q
    |||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  5351957 ttaaatagtacatgacatggaacaattgtaacagaacaaattagaatctttcaccactctttgtgaata-aaaaattcaacatggataaaatcaagaaac 5351859  T
Q  217 ttcagccaaaaatggaaaacaattg 241  Q
    | |||||||||||||||||||||||    
T  5351858 tacagccaaaaatggaaaacaattg 5351834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 5100512 - 5100625
Alignment:
Q  117 ttaaatggtacatgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaac 216  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  5100512 ttaaatggtatatgacatggaagaattgtaacagaacaaattagaatctttcagaactctttgtgaatacaaaaattcaccaaggataaaatctagaaac 5100611  T
Q  217 ttcag-ccaaaaat 229  Q
    | ||| ||||||||    
T  5100612 tacagaccaaaaat 5100625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 5398615 - 5398510
Alignment:
Q  117 ttaaatggtacatgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaac 216  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||    |||||| ||||||||||||||||||||||||||||||    
T  5398615 ttaaatagtacatgacatggaagaattgtaacagaacaaattagaatctttcaccactc----tgaata-aaaaattcaccatggataaaatctagaaac 5398521  T
Q  217 ttcagccaaaa 227  Q
    || ||||||||    
T  5398520 ttaagccaaaa 5398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 5242145 - 5242268
Alignment:
Q  117 ttaaatggtacatgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaac 216  Q
    ||||||||||||||||||| ||||||| || || | |||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  5242145 ttaaatggtacatgacatgaaagaattataacataacaaattagaaactttcaccactctctgtcaata-aaaaattcaccatggataaaatctagaaac 5242243  T
Q  217 ttcagccaaaaatggaaaacaattg 241  Q
    | |||  ||| ||||||||||||||    
T  5242244 tacagaaaaagatggaaaacaattg 5242268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 5334701 - 5334630
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaattagaatctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5334701 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccagattagaatctt 5334630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 5135613 - 5135726
Alignment:
Q  117 ttaaatggtacatgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaac 216  Q
    |||||||||| || |||||||||||||||| |||| |||||||||||||||||  ||||||| ||||||||||||||||||| | |||||||||||||||    
T  5135613 ttaaatggtatataacatggaagaattgtaacagaacaaattagaatctttcagaactctttttgaatacaaaaattcaccaagaataaaatctagaaac 5135712  T
Q  217 ttcag-ccaaaaat 229  Q
    | ||| ||||||||    
T  5135713 tacagaccaaaaat 5135726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 5687661 - 5687575
Alignment:
Q  153 caaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaaatggaaaacaattg 241  Q
    |||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||||||||    
T  5687661 caaattagaatctttcaaaactctttgtgaatacaaaaattcacc--ggataaaatctagaaactgcagccaaaattggaaaacaattg 5687575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 5155768 - 5155839
Alignment:
Q  175 ctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaaatggaaaacaattgatttgct 248  Q
    ||||||||||| ||||||| |||||||||||  || |||||||||||||||||||||| |||||||||||||||    
T  5155768 ctttgtgaatataaaaatttaccatggataa--tcaagaaacttcagccaaaaatggagaacaattgatttgct 5155839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 5255884 - 5255928
Alignment:
Q  197 catggataaaatctagaaacttcagccaaaaatggaaaacaattg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5255884 catggataaaatctagaaacttcagccaaaaatggaaaacaattg 5255928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 5180539 - 5180596
Alignment:
Q  184 tacaaaaattcaccatggataaaatctagaaacttcagccaaaaatggaaaacaattg 241  Q
    |||||||| | | ||||||||||||||| ||||||||||| |||||||||||||||||    
T  5180539 tacaaaaacttagcatggataaaatctaaaaacttcagccgaaaatggaaaacaattg 5180596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 13114436 - 13114393
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  13114436 aaatgacctatattacagggggtaaagacctattaacccaaatt 13114393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 23127164 - 23127210
Alignment:
Q  184 tacaaaaattcaccatggataaaatctagaaacttcagccaaaaatg 230  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||    
T  23127164 tacaaaaatttaccatgcataaaatctagaaacttcatccaaaaatg 23127210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 10344089 - 10344049
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  10344089 gaaatgacctatattacagggggtaaagacctattaaccca 10344049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 29942461 - 29942500
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  29942461 gaaatgacctatattacagggggtaaagacctattaaccc 29942500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 8237975 - 8238033
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||  || ||| ||||||||| |||||||||||||||||||  ||||||||||    
T  8237975 tttacagggtggaaaaccggaaatgacctatattacagggggtaaaacactattaaccc 8238033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 14585386 - 14585348
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  14585386 gaaatgatttatattacaggggataaaaacctattaacc 14585348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 31851816 - 31851758
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| | ||||||| ||||||||||||| |||| ||||||||||||    
T  31851816 tttacaggggggaaaaccgaaaatgacctatattacaggggataaagacctattaaccc 31851758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 3593591 - 3593632
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  3593591 aaatgacatatattacagagggtaaagacctattaacccaaa 3593632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 14328668 - 14328705
Alignment:
Q  70 tgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  14328668 tgacctatattacagggggtaaagacctattaacccaa 14328705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 14421678 - 14421715
Alignment:
Q  70 tgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  14421678 tgacctatattacagggggtaaagacctattaacccaa 14421715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 24387788 - 24387821
Alignment:
Q  75 tatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||||||||||| |||||||||||||||    
T  24387788 tatattacagggggtaaagacctattaacccaaa 24387821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 13114644 - 13114680
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaac 103  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  13114644 aaatgacatatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 13639548 - 13639508
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||| |||||||||||||||||| ||||| |||||||    
T  13639548 gaaatgacctatattacagggggtaaagacctactaaccca 13639508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 26141486 - 26141518
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaa 93  Q
    ||||||||||||||||||||||||||| |||||    
T  26141486 aactggaaatgacttatattacaggggataaaa 26141518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 47985062 - 47985175
Alignment:
Q  128 atgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaa 227  Q
    ||||| ||||||||||||| || | ||||||  |||||||||||  |||||  || |||||||||| |||||| ||||||||||||||||||||||||||    
T  47985062 atgacgtggaagaattgtaacataacaaattgtaatctttcacctatctttaggattacaaaaatttaccatgaataaaatctagaaacttcagccaaaa 47985161  T
Q  228 atggaaaacaattg 241  Q
     |||||||||||||    
T  47985162 ttggaaaacaattg 47985175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 47994349 - 47994462
Alignment:
Q  128 atgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaa 227  Q
    ||||| ||||||||||||| || | ||||||  |||||||||||  |||||  || |||||||||| |||||| ||||||||||||||||||||||||||    
T  47994349 atgacgtggaagaattgtaacataacaaattgtaatctttcacctatctttaggattacaaaaatttaccatgaataaaatctagaaacttcagccaaaa 47994448  T
Q  228 atggaaaacaattg 241  Q
     |||||||||||||    
T  47994449 ttggaaaacaattg 47994462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 48003636 - 48003749
Alignment:
Q  128 atgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaa 227  Q
    ||||| ||||||||||||| || | ||||||  |||||||||||  |||||  || |||||||||| |||||| ||||||||||||||||||||||||||    
T  48003636 atgacgtggaagaattgtaacataacaaattgtaatctttcacctatctttaggattacaaaaatttaccatgaataaaatctagaaacttcagccaaaa 48003735  T
Q  228 atggaaaacaattg 241  Q
     |||||||||||||    
T  48003736 ttggaaaacaattg 48003749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 48012921 - 48013034
Alignment:
Q  128 atgacatggaagaattgtagcagaccaaattagaatctttcaccactctttgtgaatacaaaaattcaccatggataaaatctagaaacttcagccaaaa 227  Q
    ||||| ||||||||||||| || | ||||||  |||||||||||  |||||  || |||||||||| |||||| ||||||||||||||||||||||||||    
T  48012921 atgacgtggaagaattgtaacataacaaattgtaatctttcacctatctttaggattacaaaaatttaccatgaataaaatctagaaacttcagccaaaa 48013020  T
Q  228 atggaaaacaattg 241  Q
     |||||||||||||    
T  48013021 ttggaaaacaattg 48013034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 47115561 - 47115622
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| ||||| ||| | ||||||| |||||||||||||||||| |||||||||||||||    
T  47115561 tttacagaggagaaaaccgaaaatgacctatattacagggggtaaagacctattaacccaaa 47115622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 27497839 - 27497799
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  27497839 ggaaatgacttatattacagggggtaaagacctattaaccc 27497799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 49880736 - 49880796
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||||||||| |  ||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  49880736 tttacagggggggaaaccggaaatgacctatattacagggggtaaagacctattaacccaa 49880796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 5205175 - 5205116
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||| |||||||||||||||||||||    
T  5205175 tttacaggggggaaaaccggaaatgacctatattacaggggggtaaaaacctattaaccc 5205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 5205353 - 5205412
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattaca-gggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  5205353 tttacaggggggaaaaccggaaatgacctatattacaggggggtaaaaacctattaaccc 5205412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 7118146 - 7118084
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggg-gtaaaaacctattaacccaaa 108  Q
    |||||||||| || ||| ||||||||| ||||||||||||| ||||| |||||||||||||||    
T  7118146 tttacaggggggaaaaccggaaatgacctatattacaggggtgtaaagacctattaacccaaa 7118084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 36867856 - 36867914
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| ||| ||||||||| ||||||| |||||||||| | ||||||||||    
T  36867856 tttacaggggagaaaaccggaaatgacctatattatagggggtaaagatctattaaccc 36867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 49872949 - 49873006
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  49872949 tttacagggg-gaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 49873006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 8827438 - 8827479
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaa 102  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  8827438 aactggaaatgacctatattacagggggtaaagacctattaa 8827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 29313846 - 29313789
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||||||||| ||| | ||||||| ||||||||||| |||||| |||||||||||    
T  29313846 tttacaggggagaaaaccgaaaatgacctatattacaggaggtaaagacctattaacc 29313789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 35460702 - 35460657
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaa 93  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||    
T  35460702 ttacaggggagaaaactagaaatgacctatattacagggggtaaaa 35460657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 6510255 - 6510215
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  6510255 ggaaatgacctatattacagggggtaaagacctattaaccc 6510215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 14154837 - 14154782
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||  ||||||||    
T  14154837 tttacagggg-gaaaacaggaaatgacttatattacagggggtaaaacactattaac 14154782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 20737550 - 20737510
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  20737550 ggaaatgacctatattatagggggtaaaaacctattaaccc 20737510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 34314848 - 34314904
Alignment:
Q  50 acaggggagataactggaaatgacttatattacagg-gggtaaaaacctattaaccc 105  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||  ||||||||||    
T  34314848 acaggggagaaaaccggaaatgacttatattacaggtgggtaaaacactattaaccc 34314904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 37050062 - 37050018
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||    
T  37050062 aactggaaatgacttatattacatggggtaaaacactattaaccc 37050018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 30586221 - 30586162
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||| |||||||| ||||||||||||    
T  30586221 tttacaggggtgaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 30586162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 14248831 - 14248881
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaattagaat 115  Q
    ||||||||| ||| |||| ||||||||| |||||||||||||||| |||||    
T  14248831 ggaaatgacctattttacggggggtaaagacctattaacccaaataagaat 14248881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 22949286 - 22949248
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  22949286 ggaaatgacctatattacagggggtaaagacctattaac 22949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 48044747 - 48044785
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  48044747 aaatgacttatattgcagggggtaaaagcctattaaccc 48044785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 51460782 - 51460820
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  51460782 aaatgacctatattacagggggtaaagacctattaaccc 51460820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 3526598 - 3526537
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaac-ctattaacccaa 107  Q
    |||| ||||| || ||| ||||||||| ||||||||||||| ||||||| ||||||||||||    
T  3526598 tttataggggcgaaaaccggaaatgacatatattacaggggttaaaaacactattaacccaa 3526537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 5417283 - 5417320
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaa 102  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  5417283 ggaaatgacctatattacaggaggtaaaaacctattaa 5417320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 13041421 - 13041380
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacaggggg 88  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  13041421 tttacaggggggaaaaccggaaatgacttatattacaggggg 13041380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 13049498 - 13049457
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacaggggg 88  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  13049498 tttacaggggggaaaaccggaaatgacttatattacaggggg 13049457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 14241271 - 14241214
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| | || ||| ||||||||| |||||||||||||||||| |||||| |||||    
T  14241271 ttacaggtgggaaaaccggaaatgacctatattacagggggtaaagacctataaaccc 14241214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 23626254 - 23626299
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    ||||||||| |||||||||||||||||||  |||||||||| ||||    
T  23626254 ggaaatgacctatattacagggggtaaaacactattaaccccaatt 23626299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 26769959 - 26769918
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||||||||||||  |||||||||||||    
T  26769959 aaatgacctatattacagggggtaaaacactattaacccaaa 26769918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 54567765 - 54567802
Alignment:
Q  70 tgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  54567765 tgacctatattacagggggtaaagacctattaacccaa 54567802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 38344412 - 38344448
Alignment:
Q  75 tatattacagggggtaaaaacctattaacccaaatta 111  Q
    ||||||||||||||||||  |||||||||||||||||    
T  38344412 tatattacagggggtaaatgcctattaacccaaatta 38344448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 52839357 - 52839297
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccca 106  Q
    |||||||||| || ||  |||||||||||||||||||| |||||||||  |||||||||||    
T  52839357 tttacaggggggaaaatcggaaatgacttatattacaggggggtaaaagactattaaccca 52839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 1885 - 1826
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  1885 tttacaggggagaaaactggaaatgacctatattacagggggtaaagacctattaaccca 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 38193193 - 38193254
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||||||| |||  |||||||| |||||||||||||||||| |||||||||||||||    
T  38193193 tttacaggggagaaaaccagaaatgacctatattacagggggtaaagacctattaacccaaa 38193254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 19979690 - 19979647
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacccaaat 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  19979690 gaaatgacttatattacagggggtaaagacctattaacccaaat 19979647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 13797610 - 13797667
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||||||||| ||  ||||||||| |||||||||||||||||| |||||||||||    
T  13797610 tttacaggggagaaaatcggaaatgacctatattacagggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 24555919 - 24555958
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  24555919 gaaatgacctatattacagggggtaaaaacctattaaccc 24555958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 39580183 - 39580226
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  39580183 ggaaatgacctatattacagggggtaaagacctattaacccaaa 39580226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 3951602 - 3951660
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||||||| ||| ||||||||| ||||||| ||| |||||| |||||||||||||    
T  3951602 ttacaggggagaaaaccggaaatgacatatattataggaggtaaagacctattaaccca 3951660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 5864503 - 5864442
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaacccaa 107  Q
    ||||||||||  | |||||||||||||||||||||||| |||||||||  ||||||||||||    
T  5864503 tttacagggggaaaaactggaaatgacttatattacaggggggtaaaagactattaacccaa 5864442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 13279436 - 13279477
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  13279436 aaatgacctatattacagggggtaaagacctattaacccaaa 13279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 21298052 - 21298015
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacc 104  Q
    |||||||||||||||||||||||||| |||||||||||    
T  21298052 aaatgacttatattacagggggtaaagacctattaacc 21298015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 31534176 - 31534221
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||    
T  31534176 ggaaatgacttatattacagggtgtaaaacactattaacccaaatt 31534221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 6269572 - 6269528
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  6269572 aactgaaaatgacctatattacagggggtaaagacctattaaccc 6269528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 32946330 - 32946286
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||    
T  32946330 aactggaaatgacctatattacagggggtaaaatactattaaccc 32946286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 35158501 - 35158557
Alignment:
Q  49 tacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| || ||| | |||||||||||||||||||||||||||  ||||||||||    
T  35158501 tacaggggggaaaaccgaaaatgacttatattacagggggtaaaagactattaaccc 35158557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 3307693 - 3307736
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||| |||||||||||||||||| || ||||||||||||    
T  3307693 ggaaatgacctatattacagggggtaaagacttattaacccaaa 3307736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 5766696 - 5766637
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||  | ||| ||||||||| |||||||||||||||||| || ||||||||||    
T  5766696 tttacagggggaaaaaccggaaatgacctatattacagggggtaaagacatattaaccca 5766637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 20041134 - 20041193
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattaca-gggggtaaaaacctattaaccc 105  Q
    |||||||||  || ||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  20041134 tttacagggtggaaaaccggaaatgacctatattacaggggggtaaaaacctattaaccc 20041193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 23371487 - 23371448
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  23371487 aaatgacctatattacagggggtaaagacctattaaccca 23371448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 39065440 - 39065386
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaa 102  Q
    ||||||||||| | ||| ||||||||| |||||||||||||||||| |||||||||    
T  39065440 tttacaggggaaa-aaccggaaatgacctatattacagggggtaaagacctattaa 39065386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 5909752 - 5909710
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||| ||||||||| |||||||| |||||||||||||||    
T  5909752 gaaatgacctatattacatggggtaaagacctattaacccaaa 5909710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 9915708 - 9915651
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||||| |||| || |||||||||||||||||| ||||||||||||    
T  9915708 tttacaggggaaa-aactgaaaataacctatattacagggggtaaagacctattaaccc 9915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 9923620 - 9923563
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||||| |||| || |||||||||||||||||| ||||||||||||    
T  9923620 tttacaggggaaa-aactgaaaataacctatattacagggggtaaagacctattaaccc 9923563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 12005322 - 12005264
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||| ||| || ||||||||||| | |||||||||||||||||||  ||||||||||    
T  12005322 tttacaagggggaaaactggaaatggcctatattacagggggtaaaacactattaaccc 12005264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 13797474 - 13797416
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    ||||| ||| || ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13797474 ttacaagggggaaaaccggaaatgacttatattacaggggggtaaagacctattaaccc 13797416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 19272468 - 19272506
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  19272468 aaatgacctatattacagggggtaaagacctattaaccc 19272506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 24478081 - 24478024
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||| ||||||||| |||||||||||||||||||  ||||||||||    
T  24478081 tttacaggggaaa-aaccggaaatgacctatattacagggggtaaaacactattaaccc 24478024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 48945222 - 48945184
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  48945222 aaatgacctatattacagagggtaaaaacctattaaccc 48945184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 2300880 - 2300819
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||| ||| || ||| ||||||||| |||||||||||||||| ||  |||||||||||||    
T  2300880 tttacaagggggaaaaccggaaatgacctatattacagggggtagaacactattaacccaaa 2300819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 23784621 - 23784584
Alignment:
Q  68 aatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  23784621 aatgacctatattacagggggtaaagacctattaaccc 23784584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 48104747 - 48104787
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    ||||||| ||||||||||| |||||| ||||||||||||||    
T  48104747 aaatgacctatattacaggaggtaaagacctattaacccaa 48104787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 34826 - 34885
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||||||||| || ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  34826 tttacagggg-gaaaactggaaatgacctatattacagggggtaaagacctattaacccaa 34885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 28149666 - 28149724
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||||| || ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  28149666 tttacagggg-gaaaaccggaaatgacctatattacagggggtaaaaacctattaaccca 28149724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 17328150 - 17328092
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  17328150 tttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 17328092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 34635764 - 34635706
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  34635764 tttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 34635706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 38128078 - 38128136
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||  ||||||||||    
T  38128078 tttacaggggggaaaactggaaataacttatattacagggggtaaaagactattaaccc 38128136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 6468098 - 6468058
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  6468098 ggaaatgacttatattacagggggtaaaaacttattaaccc 6468058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 19641504 - 19641445
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||||  || ||| ||||||||| |||||||||||||||||| |||||||||||||    
T  19641504 tttacagggtggaaaaccggaaatgacctatattacagggggtaaagacctattaaccca 19641445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 19840097 - 19840038
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||||  || ||| ||||||||| |||||||||||||||||| |||||||||||||    
T  19840097 tttacagggtggaaaaccggaaatgacctatattacagggggtaaagacctattaaccca 19840038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 32449744 - 32449689
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    |||||||||||| ||| ||||||||| ||||||| |||||||||| ||||||||||    
T  32449744 ttacaggggagaaaaccggaaatgacctatattaaagggggtaaagacctattaac 32449689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 3364580 - 3364618
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3364580 aaatgacttatattacagggggtaaagacctattaaccc 3364618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 29835140 - 29835099
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  29835140 aaatgacctatattacagggggtaaagacctattaacccaaa 29835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 38210922 - 38210865
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||||||||| |||  ||||| || |||||||||||||||||| |||||||||||    
T  38210922 tttacaggggagaaaaccagaaattacctatattacagggggtaaagacctattaacc 38210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 37147591 - 37147551
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  37147591 ggaaatgacctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 19052191 - 19052230
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  19052191 gaaatgacatatattacagggggtaaagacctattaaccc 19052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 20182511 - 20182554
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||    
T  20182511 ggaaatgacctatattacggggggtaaagacctattaacccaaa 20182554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 22846051 - 22846012
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  22846051 aaatgacttatattacagggggtaaaacactattaaccca 22846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 27866245 - 27866194
Alignment:
Q  54 gggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||| ||| ||||||||| |||||||||||||||||| || |||||||||    
T  27866245 gggagaaaaccggaaatgacgtatattacagggggtaaagacttattaaccc 27866194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 38385975 - 38385936
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  38385975 ggaaatgacctatattacagggggtaaagacctattaacc 38385936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 776611 - 776649
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  776611 aaatgacttatattacagggggtaaaactctattaaccc 776649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 3364365 - 3364327
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  3364365 aaatgacttatattacaggggataaagacctattaaccc 3364327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 19493467 - 19493505
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  19493467 aaatgacctatattacagggggtaaagacctattaaccc 19493505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 20182302 - 20182264
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  20182302 aaatgacctatattacaggggataaaaacctattaaccc 20182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 22116193 - 22116155
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  22116193 aaatgacctatattacagggggtaaagacctattaaccc 22116155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 38127821 - 38127763
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||  | ||| ||||||||| |||||||||||||||||||  ||||||||||    
T  38127821 tttacagggggtaaaaccggaaatgacctatattacagggggtaaaacactattaaccc 38127763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 43301919 - 43301877
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||| |||||||||||||||||| |||||||||| ||||    
T  43301919 gaaatgacctatattacagggggtaaagacctattaactcaaa 43301877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 45464630 - 45464668
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  45464630 aaatgacctatattacaggaggtaaaaacctattaaccc 45464668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 758745 - 758802
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| || ||| ||||||||| ||||||||||||||||||   ||||||||||    
T  758745 ttacaggggggaaaaccggaaatgacctatattacagggggtaaagcactattaaccc 758802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 18555617 - 18555576
Alignment:
Q  65 ggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  18555617 ggaaatgacttatattacaggggggtaaagacctattaaccc 18555576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 30371614 - 30371651
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaac 103  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  30371614 gaaatgacctatattacagggggtaaagacctattaac 30371651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 33641170 - 33641129
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  33641170 aaatgacctatattacagagggtaaagacctattaacccaaa 33641129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 5513542 - 5513482
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaac-ctattaaccca 106  Q
    |||| ||||| || ||||||||||||| |||||||||||||  |||||| |||||||||||    
T  5513542 tttataggggcgaaaactggaaatgacatatattacaggggtgaaaaacactattaaccca 5513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 29098058 - 29098022
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaa 102  Q
    |||||||||||||||||| |||||||| |||||||||    
T  29098058 gaaatgacttatattacaaggggtaaagacctattaa 29098022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 4150 - 4208
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  4150 tttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 12936225 - 12936167
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||  ||||||||||    
T  12936225 tttacaggggagaaaactggaaatgacctatattacaggaggtaaaacactattaaccc 12936167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 29309623 - 29309565
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  29309623 tttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 29309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 4482085 - 4482045
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  4482085 ggaaatgacatatattacagggggtaaaaacctattaaccc 4482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 29309791 - 29309831
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  29309791 ggaaatgacctatattacagggggtaaaaacctattaaccc 29309831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 43945207 - 43945159
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaattagaat 115  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  43945207 aaatgacatatattacagggggtaaagacctattaacccaaataagaat 43945159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 27543642 - 27543685
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  27543642 ggaaatgacctatattacagggggtaaagacctattaacccaaa 27543685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 39451543 - 39451505
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39451543 aaatgacttatattagagggggtaaaaacctattaaccc 39451505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 960514 - 960555
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  960514 ggaaatgacctatattacagggggtaaagacctattaaccca 960555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 24971015 - 24970963
Alignment:
Q  54 gggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    |||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  24971015 gggagaaaaccggaaatgacttatattacaggggggtaaagacctattaaccc 24970963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 25277723 - 25277763
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  25277723 ggaaatgacctatattacagggggtaaagacctattaaccc 25277763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 32684620 - 32684560
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccca 106  Q
    |||||||||| || ||| |||||||||||||||||||| |||||||||  |||||||||||    
T  32684620 tttacaggggggaaaaccggaaatgacttatattacaggggggtaaaagactattaaccca 32684560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 2873784 - 2873827
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    |||||||||||||||||||||||||||  |||||||||| ||||    
T  2873784 aaatgacttatattacagggggtaaaacactattaaccctaatt 2873827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 4482299 - 4482338
Alignment:
Q  67 aaatgacttatattacaggggg-taaaaacctattaaccc 105  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4482299 aaatgacttatattacagggggttaaaaacctattaaccc 4482338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 6952912 - 6952959
Alignment:
Q  58 gataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||| |||||||||| ||||||||||||| |||| ||||||||||||    
T  6952912 gataattggaaatgacatatattacaggggataaagacctattaaccc 6952959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 34985340 - 34985379
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  34985340 gaaatgacctatattacagggggtaaagacctattaaccc 34985379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 43400710 - 43400671
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  43400710 gaaatgacatatattacagggggtaaagacctattaaccc 43400671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 1600109 - 1600071
Alignment:
Q  73 cttatattacagggggtaaaaacctattaacccaaatta 111  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  1600109 cttatattacagggggtaaagacctattaaccccaatta 1600071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 12330391 - 12330333
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||  | |||| ||||| || |||||||||||||||||| ||||||||||||    
T  12330391 tttacagggggaaaaactagaaataacctatattacagggggtaaagacctattaaccc 12330333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 14329619 - 14329657
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  14329619 aaatgacctatattacagggggtaaagacctattaaccc 14329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 25277531 - 25277469
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaacccaaa 108  Q
    |||||||||| || | | ||||||||| |||||||||| |||||||| |||||||||||||||    
T  25277531 tttacaggggggaaacccggaaatgacatatattacaggggggtaaagacctattaacccaaa 25277469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 29726145 - 29726103
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||| ||||||||| |||||||||||||||||| |||||    
T  29726145 gaaatgacctatattacatggggtaaaaacctattaatccaaa 29726103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 34227385 - 34227327
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| || | ||| ||||||||| |||||||||||||||||||  ||||||||||    
T  34227385 tttacaggagataaaaccggaaatgacctatattacagggggtaaaacactattaaccc 34227327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 38711939 - 38711997
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||  | ||||| ||||||| |||||||||||||||||||  ||||||||||    
T  38711939 tttacagggggtaaaactgaaaatgacctatattacagggggtaaaacactattaaccc 38711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 40652659 - 40652621
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  40652659 ggaaatgacctatattacagggggtaaagacctattaac 40652621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 8315982 - 8316038
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    |||||||||| || |||| |||||||  |||| |||||||||||||||||||||||||    
T  8315982 tttacagggggga-aactagaaatgatctataatacagggggtaaaaacctattaacc 8316038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 18367259 - 18367300
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacaggggg 88  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||    
T  18367259 tttacaggggagaaaaccggaaatgacctatattacaggggg 18367300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 9513868 - 9513828
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  9513868 ggaaatgacctatattacagggggtaaagacatattaaccc 9513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 16009865 - 16009904
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  16009865 aaatgacttatattacagggggtaaaca-ctattaacccaa 16009904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 11721583 - 11721641
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||  ||||||||||    
T  11721583 tttacaggggggaaaactggaaatgacttatattacaaggggtaaaagactattaaccc 11721641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 22642321 - 22642380
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||||||||||||| |||||||||| |||||||| ||||||||||||    
T  22642321 tttacaggggggaaaactggaaatgacctatattacagaggggtaaagacctattaaccc 22642380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 29104495 - 29104444
Alignment:
Q  54 gggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||| ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  29104495 gggagaaaactgaaaatgacctatattacagggggtaaagacctattaaccc 29104444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 10976747 - 10976804
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  10976747 tttacagggg-gaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 10976804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 2870901 - 2870945
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaacccaaat 109  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  2870901 ggaaatgacctatattacaggaggtaaagacctattaacccaaat 2870945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 12399585 - 12399645
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||||||||| || ||| | |||| || |||||||||||||||||| ||||||||||||||    
T  12399585 tttacaggggggaaaaccgaaaataacctatattacagggggtaaagacctattaacccaa 12399645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 12823732 - 12823775
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  12823732 aaatgacctatattgcaggaggtaaaaacctattaacccaaatt 12823775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 36992982 - 36993041
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||  | ||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  36992982 tttacagggggaaaaaccggaaatgacctatattacagagggtaaagacctattaaccca 36993041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 39418950 - 39419013
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattaca-gggggtaaaaacctattaacccaaat 109  Q
    ||||||| || || ||| ||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  39418950 tttacagaggggaaaaccggaaatgacctatattacaggggggtaaagacctattaacccaaat 39419013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 12148225 - 12148283
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||  | ||| ||||||||| |||||||||||||||||||  ||||||||||    
T  12148225 tttacagggggtaaaaccggaaatgacctatattacagggggtaaaacactattaaccc 12148283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 16504778 - 16504716
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacaggggg-taaaaacctattaacccaaa 108  Q
    ||||||||||| | ||| ||||||||||||||| || ||||| |||| |||||||||||||||    
T  16504778 tttacaggggaaaaaaccggaaatgacttatataacggggggataaagacctattaacccaaa 16504716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 17886020 - 17886078
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||  || ||||| ||||||| |||||||||||||||||||  ||||||||||    
T  17886020 tttacagggtggaaaactgaaaatgacctatattacagggggtaaaatactattaaccc 17886078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 21039923 - 21039865
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| ||| | ||||| ||||||| |||||||||||||||||||  ||||||||||    
T  21039923 tttacagaggataaaactgaaaatgacctatattacagggggtaaaacactattaaccc 21039865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 22551560 - 22551522
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  22551560 aaatgacctatattacagggggtaaagacctattaaccc 22551522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 26524619 - 26524681
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaac-ctattaacccaaa 108  Q
    |||| ||||| || ||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  26524619 tttataggggcgaaaactggaaatgacatatattacaggggtgaaaaacactattaacccaaa 26524681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 33658929 - 33658871
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaacc 104  Q
    |||||||||| || ||| ||||||||| |||||||||| |||||||| |||||||||||    
T  33658929 tttacaggggggaaaaccggaaatgacctatattacaggggggtaaagacctattaacc 33658871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 11721324 - 11721255
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaacccaaattagaat 115  Q
    ||||||||||  | ||||||||||||| |||||||||| |||||||||  ||||||||||  ||||||||    
T  11721324 tttacagggggtaaaactggaaatgacctatattacagaggggtaaaacactattaacccttattagaat 11721255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 30916521 - 30916480
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| ||||||| |||||||||||| |||||||||||||    
T  30916521 aaatgacatatattatagggggtaaaaaactattaacccaaa 30916480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 31861744 - 31861789
Alignment:
Q  66 gaaatgacttatattaca-gggggtaaaaacctattaacccaaatt 110  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||    
T  31861744 gaaatgacatatattacaagggggtaaagacctattaacccaaatt 31861789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 31920118 - 31920057
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||| || ||  |||||| || |||||||||||||||||||  |||||||||||||    
T  31920118 tttacaggggggaaaagcggaaataacctatattacagggggtaaaacactattaacccaaa 31920057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 34648727 - 34648768
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  34648727 ggaaatgacttatattacaggggataaaacactattaaccca 34648768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 41123202 - 41123161
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacaggggg 88  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  41123202 tttacaggggggaaaaccggaaatgacttatattacaggggg 41123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 4413967 - 4413927
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||||  ||||||||||    
T  4413967 ggaaatgacctatattacagggggtaaaacactattaaccc 4413927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 6897101 - 6897161
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacaggg-ggtaaaaacctattaaccca 106  Q
    ||||||||||| | ||||||||||||| |||||||||||| |||||||  ||| |||||||    
T  6897101 tttacaggggataaaactggaaatgacctatattacagggaggtaaaacactactaaccca 6897161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 8855699 - 8855739
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  8855699 ggaaatgacttatattacaggaggtaaaacactattaaccc 8855739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 24329516 - 24329572
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    ||||||||||| | ||| ||||| ||| ||||||||| |||||||| ||||||||||    
T  24329516 tttacaggggaaaaaaccggaaacgacctatattacaaggggtaaagacctattaac 24329572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 31861531 - 31861491
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| ||||||||||||| |||| ||||||||||||    
T  31861531 ggaaatgacctatattacaggggataaagacctattaaccc 31861491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 34407915 - 34407951
Alignment:
Q  70 tgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  34407915 tgacttatattacagggggtaaataccttttaaccca 34407951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 24215740 - 24215798
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| |||  |||||||| |||||||||||||||||| ||||||||||||    
T  24215740 tttacaggggagaaaaccagaaatgacctatattacagggggtaaagacctattaaccc 24215798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 32682488 - 32682546
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||  ||||||||||    
T  32682488 tttacaggggagaaaaccggaaatgacttatattacatggggtaaaatactattaaccc 32682546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 37273408 - 37273452
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  37273408 aactggaaatgacctatattacagggggtaaagacctattaaccc 37273452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 50727629 - 50727590
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  50727629 gaaatgacctatattacagggggtaaaaacctattaaccc 50727590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 50735643 - 50735604
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  50735643 gaaatgacctatattacagggggtaaaaacctattaaccc 50735604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 11563516 - 11563574
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | |||  |||||||| |||||||||||||||||| ||||||||||||    
T  11563516 tttacaggggaaaaaaccagaaatgacctatattacagggggtaaagacctattaaccc 11563574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 16493576 - 16493518
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| ||||||||||| |||||| ||||||||||||    
T  16493576 tttacaggggtgaaaaccggaaatgacctatattacaggaggtaaagacctattaaccc 16493518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 22272968 - 22272930
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  22272968 aaatgacctatattacagggggtaaaaacctattaaccc 22272930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 21798565 - 21798625
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||| || ||||| ||||||| ||||||||||||| |||| |||||||||||||||    
T  21798565 tttacagggggga-aactgaaaatgacctatattacaggggataaagacctattaacccaaa 21798625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 27579743 - 27579800
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||| || ||||||||    
T  27579743 tttacaggggagaaaaccggaaatgacctatattacagagggtaaagacatattaacc 27579800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 49300795 - 49300734
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||| || ||| ||||||||| |||||||||||||||||||  |||||||| ||||    
T  49300795 tttacaggggggaaaaccggaaatgacctatattacagggggtaaaacactattaactcaaa 49300734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 20125435 - 20125475
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  20125435 ggaaatgacctatattacagggggtaaagacctattaaccc 20125475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 35539797 - 35539837
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  35539797 ggaaatgacctatattacagggggtaaatacctattaaccc 35539837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 550711 - 550672
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  550711 aaatgacctatattacagggggtaaagacctattaaccca 550672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 18454251 - 18454192
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacag-ggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||| |||||||||| |||||||| ||||||||||||    
T  18454251 tttacaggggtgaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 18454192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 27579563 - 27579516
Alignment:
Q  56 gagataactggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    |||| ||| ||||||||| |||||||||||||||||| ||||||||||    
T  27579563 gagaaaaccggaaatgacctatattacagggggtaaagacctattaac 27579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 46094239 - 46094298
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||  | ||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  46094239 tttacagggggaaaaaccggaaatgacctatattacagagggtaaagacctattaaccca 46094298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 51396198 - 51396159
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  51396198 gaaatgacttatattacaggggataaagacctattaaccc 51396159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 9001474 - 9001444
Alignment:
Q  75 tatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||||||||||||||    
T  9001474 tatattacagggggtaaaaacctattaaccc 9001444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 20125262 - 20125216
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    ||||||||||||  |||||| ||||||||||| ||||||||||||||    
T  20125262 aactggaaatgaactatattccagggggtaaatacctattaacccaa 20125216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 21780160 - 21780122
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  21780160 aaatgacctatattacagggggtaaagacctattaaccc 21780122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 31226498 - 31226556
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||  | ||| ||||||||| |||||||||||||||||||  ||||||||||    
T  31226498 tttacagggggtaaaaccggaaatgacctatattacagggggtaaaacactattaaccc 31226556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 50138526 - 50138488
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  50138526 aaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 51965412 - 51965371
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||| |||||||||||| ||||| |||||||||||||    
T  51965412 ggaaatgacctatattacagggagtaaagacctattaaccca 51965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 2032748 - 2032788
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||||  ||||||||||    
T  2032748 ggaaatgacctatattacagggggtaaaatactattaaccc 2032788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 5401997 - 5402056
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattaca-gggggtaaaaacctattaaccca 106  Q
    |||||||||| || ||| ||||||||| ||||||||| ||||||||| |||||||||||||    
T  5401997 tttacagggg-gaaaaccggaaatgacctatattacaagggggtaaagacctattaaccca 5402056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 18510027 - 18509983
Alignment:
Q  61 aactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||| ||||||||||||| |||||  ||||||||||    
T  18510027 aactggaaatgacctatattacaggggataaaacactattaaccc 18509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 29104199 - 29104159
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||||  ||||||||||    
T  29104199 ggaaatgacctatattacagggggtaaaacactattaaccc 29104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 50773621 - 50773661
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  50773621 ggaaatgacttatattacggggggtaaaacactattaaccc 50773661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 63348 - 63409
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||||| | ||| ||||||||| |||||||||||||||||||  |||||||||||||    
T  63348 tttacaggggataaaaccggaaatgacctatattacagggggtaaaacactattaacccaaa 63409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 5330478 - 5330417
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||| || ||||| ||||||| |||||||||  |||||||||||||||||||||||    
T  5330478 tttacaggggtgaaaactgaaaatgacctatattacatagggtaaaaacctattaacccaaa 5330417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 5932279 - 5932337
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || ||| ||||||||||||||||| |||||||||||  ||||||||||    
T  5932279 tttacaggggggaaaaccggaaatgacttatattatagggggtaaaagactattaaccc 5932337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 22604661 - 22604719
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||| ||||||||| ||||||||||||| |||| ||||||||||||    
T  22604661 tttacaggggaaaaaaccggaaatgacctatattacaggggttaaagacctattaaccc 22604719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 24987665 - 24987608
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  24987665 tttacaggggaaa-aaccggaaatgacctatattacagggggtaaagacctattaaccc 24987608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 51470164 - 51470126
Alignment:
Q  70 tgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  51470164 tgacttatattacagggggtaaagacctattaacccaaa 51470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 5348221 - 5348160
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||| || ||  ||||||||| |||||||||| ||||||| |||||||||||||||    
T  5348221 tttacaggggtgacaatcggaaatgacctatattacagagggtaaagacctattaacccaaa 5348160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 13545636 - 13545579
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||  | ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  13545636 ttacagggggaaaaaccggaaatgacatatattacagggggtaaagacctattaaccc 13545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 35034301 - 35034354
Alignment:
Q  54 gggagataactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||||| ||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  35034301 gggagaaaaccggaaatgacctatattacaggggataaagacctattaacccaa 35034354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 47021876 - 47021831
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacccaaatta 111  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||    
T  47021876 gaaatgacttatattacggggggtaaagacctattaaccctaatta 47021831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 7112532 - 7112492
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  7112532 aaatgacatatattacagggggtaaagacctattaacccaa 7112492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 18458819 - 18458859
Alignment:
Q  65 ggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  18458819 ggaaatgacctatattacagggggtaaagacctattaaccc 18458859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 42736821 - 42736880
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    |||||||||| || ||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  42736821 tttacagggg-gaaaaccggaaatgacctatattacaggggataaagacctattaacccaa 42736880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 44826138 - 44826078
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||||||||| ||| | ||||||| | |||||||||||||||| || ||||||||||||    
T  44826138 ttacaggggagaaaaccgaaaatgacctctattacagggggtaaagacttattaacccaaa 44826078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 10027995 - 10028034
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  10027995 gaaatgacctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 30659426 - 30659465
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  30659426 gaaatgacatatattacagggggtaaagacctattaaccc 30659465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 4646795 - 4646757
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  4646795 aaatgacttatattagagggggtaaagacctattaaccc 4646757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 7112739 - 7112777
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  7112739 gaaatgacatatattacagggggtaaagacctattaacc 7112777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 16698927 - 16698869
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||| ||||||||  |||||||||| ||||||| ||||||||||||    
T  16698927 tttacaggggaaaaaaccggaaatgatctatattacagagggtaaagacctattaaccc 16698869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 28797360 - 28797418
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||| | ||| ||||||||| |||||||||||||||||| |  |||||||||    
T  28797360 tttacaggggaaaaaaccggaaatgacctatattacagggggtaaagatttattaaccc 28797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 47022088 - 47022126
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  47022088 aaatgacctatattacagggggtaaagacctattaaccc 47022126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 15336413 - 15336372
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||||||||||| ||||||||| |||||    
T  15336413 aaatgacctatattacagggggtaaagacctattaatccaaa 15336372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 21853455 - 21853418
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaac 103  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  21853455 gaaatgacctatattacagggggtaaagacctattaac 21853418  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 21853618 - 21853557
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    |||||| ||| || ||| ||||||||| ||||||| |||||||||||  |||||||||||||    
T  21853618 tttacatgggggaaaaccggaaatgacctatattatagggggtaaaacactattaacccaaa 21853557  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 27265761 - 27265704
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    ||||||||||| | | | | |||||||||||||||||||||||||||  |||||||||    
T  27265761 tttacaggggacaaacccgaaaatgacttatattacagggggtaaaacactattaacc 27265704  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 46136124 - 46136083
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaa 108  Q
    ||||||| |||||||||||||||||| || ||||||||||||    
T  46136124 aaatgacctatattacagggggtaaagacttattaacccaaa 46136083  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 47220950 - 47220913
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacc 104  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  47220950 aaatgacttatattgcaggggataaaaacctattaacc 47220913  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 2059444 - 2059480
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaa 102  Q
    |||||||| |||||||||||||||||| |||||||||    
T  2059444 gaaatgacctatattacagggggtaaagacctattaa 2059480  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 8928847 - 8928815
Alignment:
Q  73 cttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||||||||||||| ||||||||||||    
T  8928847 cttatattacagggggtaaagacctattaaccc 8928815  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 13738506 - 13738462
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaa 92  Q
    |||||||||  | ||||||||||||| ||||||||||||||||||    
T  13738506 ttacagggggaaaaactggaaatgacctatattacagggggtaaa 13738462  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 21853998 - 21854054
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaac 103  Q
    ||||||||||| | ||| ||||| ||| ||||||||| |||||||| ||||||||||    
T  21853998 tttacaggggaaaaaaccggaaacgacctatattacaaggggtaaagacctattaac 21854054  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 28410952 - 28410908
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaatta 111  Q
    ||||||| ||||||||||||| |||| |||||||||||| |||||    
T  28410952 aaatgacctatattacaggggataaagacctattaaccctaatta 28410908  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 29018615 - 29018647
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctat 99  Q
    |||||||||||||||||||||||||| ||||||    
T  29018615 aaatgacttatattacagggggtaaagacctat 29018647  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 40091720 - 40091748
Alignment:
Q  64 tggaaatgacttatattacagggggtaaa 92  Q
    |||||||||||||||||||||||||||||    
T  40091720 tggaaatgacttatattacagggggtaaa 40091748  T

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Target: scaffold0384 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 4446 - 4489
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  4446 aaatgacctatattacagggggtaaagacctattaacccaaatt 4489  T

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Target: scaffold0095 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 10393 - 10355
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10393 aaatgacttatattagagggggtaaaaacctattaaccc 10355  T

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Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 91107 - 91050
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||||| || |||| |||||||| |||||||||||||||||| ||||||||||||    
T  91107 tttacagggg-gaaaactagaaatgacctatattacagggggtaaagacctattaaccc 91050  T

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Target: scaffold0092 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 44447 - 44392
Alignment:
Q  48 ttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacc 104  Q
    |||||||||| | ||| ||||||||||||||||||| |||||||| |||||||||||    
T  44447 ttacaggggaaa-aaccggaaatgacttatattacaaggggtaaagacctattaacc 44392  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 26346 - 26306
Alignment:
Q  67 aaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  26346 aaatgacctatattacagggggtaaagacctattaacccaa 26306  T

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Target: scaffold0740 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 3704 - 3646
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaaccca 106  Q
    ||||||||||| | ||||||||||||| ||||||||||||| ||||  ||||||||||||    
T  3704 tttacaggggaaa-aactggaaatgacctatattacaggggataaatgcctattaaccca 3646  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 7898 - 7859
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaaccc 105  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  7898 gaaatgacatatattacagggggtaaagacctattaaccc 7859  T

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Target: scaffold0450; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 8113 - 8157
Alignment:
Q  66 gaaatgacttatattacagggggtaaaaacctattaacccaaatt 110  Q
    |||||||| |||||||||| ||||||| |||||||||||| ||||    
T  8113 gaaatgacctatattacagtgggtaaagacctattaaccctaatt 8157  T

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Target: scaffold1122 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1122
Description:

Target: scaffold1122; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 350 - 290
Alignment:
Q  47 tttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaacccaa 107  Q
    ||||||||||||| |||   |||| || |||||| |||| |||||||||||||||||||||    
T  350 tttacaggggagaaaacaaaaaataacctatattgcaggaggtaaaaacctattaacccaa 290  T

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