View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15465_low_91 (Length: 258)

Name: NF15465_low_91
Description: NF15465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15465_low_91
NF15465_low_91
[»] chr8 (62 HSPs)
chr8 (108-247)||(24512168-24512307)
chr8 (120-247)||(25198267-25198394)
chr8 (108-247)||(40337192-40337331)
chr8 (138-247)||(2562731-2562840)
chr8 (138-247)||(3113534-3113643)
chr8 (138-247)||(31746406-31746515)
chr8 (111-247)||(25184999-25185135)
chr8 (132-247)||(37956111-37956226)
chr8 (136-247)||(38761359-38761470)
chr8 (138-244)||(24962369-24962475)
chr8 (127-247)||(7772497-7772617)
chr8 (108-247)||(38773349-38773489)
chr8 (139-247)||(41086971-41087079)
chr8 (132-247)||(57189-57304)
chr8 (138-245)||(37141722-37141829)
chr8 (132-247)||(38770188-38770303)
chr8 (133-247)||(12998694-12998808)
chr8 (138-247)||(17933700-17933810)
chr8 (137-247)||(37600889-37600999)
chr8 (138-244)||(43980587-43980693)
chr8 (132-246)||(45185269-45185383)
chr8 (138-247)||(7172215-7172324)
chr8 (138-247)||(34882666-34882775)
chr8 (138-247)||(43191478-43191587)
chr8 (138-246)||(885458-885565)
chr8 (132-247)||(39543661-39543779)
chr8 (136-247)||(38202993-38203104)
chr8 (138-244)||(14846925-14847031)
chr8 (137-243)||(26878733-26878839)
chr8 (138-247)||(14577653-14577762)
chr8 (137-244)||(16002727-16002834)
chr8 (137-243)||(24276562-24276666)
chr8 (133-247)||(25888586-25888700)
chr8 (137-247)||(36437496-36437606)
chr8 (132-201)||(4273955-4274024)
chr8 (138-247)||(5191550-5191658)
chr8 (170-247)||(36309597-36309674)
chr8 (138-245)||(10396233-10396338)
chr8 (139-247)||(31252656-31252763)
chr8 (138-244)||(40517739-40517842)
chr8 (137-244)||(44255448-44255555)
chr8 (144-246)||(45183863-45183965)
chr8 (138-247)||(1177157-1177265)
chr8 (138-247)||(40790785-40790893)
chr8 (143-247)||(41541550-41541652)
chr8 (136-244)||(3006785-3006893)
chr8 (171-247)||(12762871-12762947)
chr8 (138-202)||(14522650-14522714)
chr8 (138-202)||(45283828-45283892)
chr8 (138-239)||(16644045-16644146)
chr8 (138-247)||(22590371-22590480)
chr8 (138-247)||(40602042-40602151)
chr8 (177-247)||(35794777-35794847)
chr8 (176-237)||(34157951-34158012)
chr8 (138-246)||(31673593-31673700)
chr8 (143-247)||(34869831-34869935)
chr8 (171-246)||(30262540-30262615)
chr8 (164-247)||(35709100-35709183)
chr8 (146-235)||(14739433-14739522)
chr8 (190-247)||(23399778-23399835)
chr8 (138-247)||(45203755-45203863)
chr8 (146-237)||(27569-27660)
[»] chr4 (67 HSPs)
chr4 (120-247)||(25477203-25477330)
chr4 (132-247)||(52226009-52226124)
chr4 (124-244)||(39237592-39237712)
chr4 (108-247)||(5448628-5448767)
chr4 (132-247)||(20262394-20262509)
chr4 (132-247)||(54438500-54438615)
chr4 (139-246)||(39197035-39197143)
chr4 (108-247)||(16070397-16070536)
chr4 (132-247)||(24072757-24072872)
chr4 (132-247)||(46729296-46729410)
chr4 (138-246)||(43509079-43509185)
chr4 (136-244)||(50782772-50782880)
chr4 (137-247)||(5536492-5536602)
chr4 (138-244)||(12624692-12624798)
chr4 (138-244)||(29584890-29584996)
chr4 (138-247)||(22750842-22750951)
chr4 (138-247)||(30153222-30153331)
chr4 (138-247)||(37625125-37625234)
chr4 (138-247)||(41945773-41945881)
chr4 (138-247)||(51787767-51787876)
chr4 (138-244)||(5932883-5932988)
chr4 (138-244)||(14602658-14602764)
chr4 (138-247)||(19654424-19654533)
chr4 (138-247)||(37175022-37175130)
chr4 (138-247)||(38136351-38136460)
chr4 (138-247)||(20185656-20185765)
chr4 (120-244)||(48472498-48472623)
chr4 (138-247)||(54701290-54701396)
chr4 (138-237)||(56373354-56373453)
chr4 (141-247)||(34543701-34543807)
chr4 (138-244)||(52198731-52198837)
chr4 (138-247)||(20291336-20291445)
chr4 (138-243)||(22651460-22651565)
chr4 (138-247)||(28116505-28116614)
chr4 (154-247)||(31937392-31937485)
chr4 (138-247)||(41920038-41920147)
chr4 (148-247)||(54359690-54359788)
chr4 (138-240)||(3684195-3684297)
chr4 (138-247)||(13096542-13096650)
chr4 (133-237)||(31840089-31840191)
chr4 (138-237)||(31486484-31486583)
chr4 (138-247)||(20116448-20116555)
chr4 (138-244)||(26186758-26186864)
chr4 (161-247)||(32236850-32236936)
chr4 (137-243)||(33246501-33246607)
chr4 (185-247)||(40411343-40411405)
chr4 (170-247)||(5168007-5168084)
chr4 (140-244)||(5416872-5416974)
chr4 (170-247)||(43800836-43800913)
chr4 (196-244)||(21121021-21121069)
chr4 (138-247)||(7002178-7002288)
chr4 (138-247)||(39414232-39414339)
chr4 (170-247)||(44812607-44812684)
chr4 (174-243)||(52768903-52768972)
chr4 (138-247)||(20293739-20293852)
chr4 (171-247)||(32107874-32107950)
chr4 (144-247)||(20791929-20792032)
chr4 (138-176)||(40411676-40411714)
chr4 (138-247)||(45628075-45628184)
chr4 (168-246)||(52676046-52676124)
chr4 (138-223)||(3094178-3094263)
chr4 (138-247)||(10602210-10602316)
chr4 (186-247)||(36513310-36513371)
chr4 (138-242)||(52977553-52977656)
chr4 (209-247)||(56217053-56217091)
chr4 (203-244)||(31917438-31917479)
chr4 (214-247)||(34643466-34643499)
[»] chr1 (80 HSPs)
chr1 (19-109)||(34011905-34011995)
chr1 (127-247)||(16582517-16582637)
chr1 (108-247)||(5085088-5085227)
chr1 (138-245)||(15179405-15179512)
chr1 (127-247)||(25269361-25269481)
chr1 (108-247)||(33231805-33231944)
chr1 (138-247)||(3143398-3143507)
chr1 (138-235)||(30898574-30898671)
chr1 (138-247)||(48721867-48721976)
chr1 (132-244)||(8877761-8877873)
chr1 (127-247)||(29140653-29140773)
chr1 (132-247)||(36084959-36085074)
chr1 (138-247)||(8984660-8984769)
chr1 (138-247)||(23982591-23982700)
chr1 (132-243)||(35001273-35001384)
chr1 (138-237)||(38680470-38680569)
chr1 (138-244)||(15512783-15512889)
chr1 (138-244)||(28948966-28949072)
chr1 (138-247)||(2342899-2343008)
chr1 (108-245)||(34696884-34697021)
chr1 (133-246)||(46495299-46495412)
chr1 (133-246)||(4817906-4818017)
chr1 (133-246)||(4829706-4829817)
chr1 (137-246)||(47643536-47643643)
chr1 (138-247)||(20564770-20564879)
chr1 (108-244)||(32047407-32047541)
chr1 (138-247)||(47754641-47754750)
chr1 (132-232)||(6282463-6282563)
chr1 (143-247)||(28723652-28723756)
chr1 (132-247)||(44395524-44395639)
chr1 (109-247)||(9675666-9675804)
chr1 (138-232)||(44163227-44163321)
chr1 (138-247)||(13723477-13723586)
chr1 (138-247)||(32152153-32152262)
chr1 (138-247)||(34102331-34102440)
chr1 (138-247)||(35365983-35366092)
chr1 (138-246)||(44335284-44335395)
chr1 (138-244)||(52141177-52141285)
chr1 (146-246)||(51996958-51997058)
chr1 (108-247)||(5322022-5322161)
chr1 (138-244)||(25258325-25258431)
chr1 (138-240)||(27531094-27531196)
chr1 (132-194)||(28334267-28334329)
chr1 (138-247)||(30336054-30336163)
chr1 (138-247)||(31305313-31305422)
chr1 (137-247)||(24414994-24415104)
chr1 (139-247)||(44652860-44652965)
chr1 (138-247)||(4813461-4813570)
chr1 (142-237)||(41737124-41737219)
chr1 (151-246)||(46591110-46591205)
chr1 (139-237)||(31807981-31808079)
chr1 (174-247)||(25063241-25063314)
chr1 (138-247)||(32144306-32144415)
chr1 (170-247)||(47070960-47071037)
chr1 (139-228)||(50692405-50692494)
chr1 (108-247)||(5852850-5852987)
chr1 (137-247)||(10160713-10160816)
chr1 (133-237)||(28679831-28679933)
chr1 (156-220)||(34012070-34012134)
chr1 (138-247)||(51390536-51390643)
chr1 (133-235)||(3143747-3143847)
chr1 (164-247)||(13145439-13145522)
chr1 (138-247)||(3831044-3831151)
chr1 (138-247)||(10842324-10842431)
chr1 (151-247)||(3072147-3072241)
chr1 (141-226)||(13352832-13352917)
chr1 (138-247)||(15457814-15457923)
chr1 (138-247)||(34331871-34331979)
chr1 (143-235)||(15911563-15911655)
chr1 (146-237)||(36389055-36389146)
chr1 (151-237)||(40702426-40702512)
chr1 (170-247)||(16395547-16395624)
chr1 (120-201)||(29302494-29302575)
chr1 (138-222)||(47133463-47133548)
chr1 (177-244)||(291637-291704)
chr1 (151-246)||(47489902-47489997)
chr1 (138-232)||(23393527-23393620)
chr1 (213-247)||(48573140-48573174)
chr1 (214-247)||(34012558-34012591)
chr1 (140-244)||(40261592-40261694)
[»] chr7 (53 HSPs)
chr7 (132-247)||(37673727-37673842)
chr7 (107-244)||(36116286-36116423)
chr7 (120-247)||(4089500-4089627)
chr7 (138-246)||(6376134-6376242)
chr7 (138-246)||(20123446-20123554)
chr7 (133-247)||(25750359-25750473)
chr7 (138-247)||(10685081-10685190)
chr7 (138-246)||(21388238-21388346)
chr7 (132-247)||(1324698-1324813)
chr7 (109-247)||(35128353-35128489)
chr7 (133-247)||(21809647-21809761)
chr7 (138-247)||(48610136-48610245)
chr7 (127-247)||(18122042-18122162)
chr7 (136-247)||(40263705-40263816)
chr7 (132-247)||(49100661-49100776)
chr7 (138-247)||(31373698-31373807)
chr7 (138-247)||(37048031-37048140)
chr7 (138-246)||(2276578-2276686)
chr7 (138-233)||(10595113-10595206)
chr7 (138-245)||(23876033-23876140)
chr7 (120-247)||(35960356-35960483)
chr7 (138-244)||(21801059-21801165)
chr7 (138-244)||(26632842-26632948)
chr7 (138-247)||(48767560-48767670)
chr7 (138-247)||(46783841-46783950)
chr7 (161-247)||(43465143-43465229)
chr7 (138-247)||(37491619-37491728)
chr7 (151-246)||(5334396-5334491)
chr7 (108-247)||(36726174-36726312)
chr7 (138-247)||(33181291-33181400)
chr7 (132-229)||(40211295-40211392)
chr7 (170-247)||(42983614-42983691)
chr7 (138-247)||(48193611-48193720)
chr7 (138-247)||(19236067-19236176)
chr7 (138-247)||(26200968-26201077)
chr7 (138-247)||(29636041-29636149)
chr7 (138-247)||(42993188-42993297)
chr7 (133-247)||(27213478-27213592)
chr7 (141-247)||(43601165-43601270)
chr7 (138-247)||(28663752-28663860)
chr7 (175-244)||(43026053-43026122)
chr7 (137-244)||(27162907-27163012)
chr7 (136-247)||(40740944-40741057)
chr7 (138-246)||(21752524-21752632)
chr7 (144-202)||(36195393-36195451)
chr7 (185-239)||(47458194-47458248)
chr7 (171-244)||(21392896-21392969)
chr7 (146-247)||(29992979-29993080)
chr7 (108-188)||(29723427-29723506)
chr7 (138-192)||(20124184-20124238)
chr7 (133-247)||(27170003-27170116)
chr7 (213-247)||(28038888-28038922)
chr7 (170-247)||(44648715-44648794)
[»] chr6 (33 HSPs)
chr6 (131-246)||(11302844-11302959)
chr6 (133-247)||(16327114-16327228)
chr6 (136-244)||(197455-197563)
chr6 (108-247)||(5895697-5895836)
chr6 (138-246)||(1763809-1763917)
chr6 (133-247)||(15981785-15981899)
chr6 (133-247)||(16350512-16350626)
chr6 (138-244)||(19838927-19839033)
chr6 (138-247)||(12514586-12514695)
chr6 (138-246)||(22410845-22410953)
chr6 (132-247)||(9461283-9461398)
chr6 (132-247)||(34513219-34513334)
chr6 (138-243)||(31945917-31946022)
chr6 (138-244)||(6791374-6791478)
chr6 (136-247)||(31536006-31536117)
chr6 (132-202)||(4250704-4250774)
chr6 (138-239)||(3729385-3729486)
chr6 (138-247)||(30465969-30466078)
chr6 (126-230)||(5084555-5084663)
chr6 (169-247)||(31152989-31153067)
chr6 (138-247)||(9428163-9428272)
chr6 (140-244)||(28238318-28238422)
chr6 (133-247)||(10669275-10669389)
chr6 (171-247)||(33607384-33607460)
chr6 (139-237)||(3887954-3888051)
chr6 (107-244)||(31780089-31780226)
chr6 (136-247)||(16186567-16186675)
chr6 (141-224)||(30248563-30248645)
chr6 (138-192)||(3307965-3308019)
chr6 (209-243)||(3729489-3729523)
chr6 (209-247)||(12503614-12503652)
chr6 (209-247)||(31487065-31487103)
chr6 (146-247)||(20522976-20523077)
[»] chr2 (69 HSPs)
chr2 (127-247)||(34329987-34330107)
chr2 (138-247)||(41665706-41665815)
chr2 (138-247)||(45214721-45214830)
chr2 (127-247)||(15851516-15851636)
chr2 (132-247)||(17250961-17251076)
chr2 (120-247)||(31644442-31644569)
chr2 (138-247)||(27297573-27297682)
chr2 (132-244)||(1246416-1246528)
chr2 (138-244)||(26512067-26512173)
chr2 (137-247)||(37355031-37355141)
chr2 (138-247)||(44424591-44424700)
chr2 (138-237)||(44421445-44421544)
chr2 (138-244)||(17663620-17663726)
chr2 (132-247)||(35178793-35178908)
chr2 (138-244)||(20361979-20362084)
chr2 (111-244)||(28733794-28733925)
chr2 (138-247)||(247656-247765)
chr2 (108-237)||(9718182-9718311)
chr2 (138-247)||(24774861-24774970)
chr2 (138-247)||(28264951-28265060)
chr2 (132-247)||(3326714-3326829)
chr2 (138-237)||(43650030-43650129)
chr2 (138-244)||(2917104-2917206)
chr2 (133-237)||(7278623-7278727)
chr2 (139-247)||(8065072-8065180)
chr2 (138-246)||(11459149-11459257)
chr2 (137-244)||(36174795-36174902)
chr2 (138-229)||(44274685-44274776)
chr2 (136-247)||(3237715-3237828)
chr2 (173-244)||(2521303-2521374)
chr2 (147-246)||(14420682-14420780)
chr2 (133-247)||(40346081-40346195)
chr2 (138-247)||(2131753-2131862)
chr2 (138-247)||(3645319-3645428)
chr2 (150-247)||(11071676-11071773)
chr2 (138-247)||(32677471-32677580)
chr2 (138-241)||(6275574-6275677)
chr2 (132-244)||(35241711-35241823)
chr2 (146-237)||(4033585-4033676)
chr2 (164-247)||(23464705-23464788)
chr2 (138-237)||(38449724-38449823)
chr2 (138-244)||(21012849-21012955)
chr2 (138-244)||(41865712-41865817)
chr2 (141-247)||(45150736-45150842)
chr2 (170-247)||(375345-375422)
chr2 (138-226)||(4398545-4398632)
chr2 (151-247)||(25731186-25731282)
chr2 (138-202)||(27749508-27749572)
chr2 (168-243)||(4758052-4758127)
chr2 (172-247)||(38982071-38982146)
chr2 (138-244)||(43709914-43710021)
chr2 (138-247)||(13477033-13477142)
chr2 (138-247)||(28190594-28190703)
chr2 (136-244)||(7257941-7258049)
chr2 (139-199)||(13534411-13534471)
chr2 (138-228)||(8667634-8667725)
chr2 (170-247)||(7255629-7255706)
chr2 (138-247)||(14527620-14527728)
chr2 (171-247)||(16808823-16808899)
chr2 (171-247)||(16848104-16848180)
chr2 (138-244)||(42250882-42250985)
chr2 (138-188)||(2395798-2395848)
chr2 (213-247)||(30401548-30401582)
chr2 (170-247)||(35453735-35453810)
chr2 (137-202)||(8384017-8384082)
chr2 (152-244)||(1604317-1604409)
chr2 (173-237)||(8393239-8393303)
chr2 (173-237)||(36846786-36846850)
chr2 (173-237)||(44462591-44462655)
[»] chr5 (52 HSPs)
chr5 (132-247)||(25017673-25017788)
chr5 (120-247)||(36177270-36177397)
chr5 (138-247)||(3559026-3559135)
chr5 (138-246)||(27587834-27587942)
chr5 (108-247)||(27798122-27798261)
chr5 (139-237)||(15898472-15898570)
chr5 (126-247)||(4738614-4738735)
chr5 (132-247)||(3247273-3247388)
chr5 (108-247)||(3631119-3631256)
chr5 (108-247)||(5845142-5845281)
chr5 (138-244)||(21912116-21912222)
chr5 (138-244)||(39690488-39690594)
chr5 (138-247)||(35569004-35569113)
chr5 (132-247)||(34877656-34877771)
chr5 (138-244)||(27642498-27642604)
chr5 (146-246)||(43453986-43454086)
chr5 (120-247)||(20946065-20946192)
chr5 (138-247)||(29866185-29866294)
chr5 (138-247)||(4857493-4857606)
chr5 (138-246)||(36347601-36347709)
chr5 (139-247)||(41521185-41521293)
chr5 (138-237)||(10523283-10523382)
chr5 (132-247)||(10933996-10934111)
chr5 (120-247)||(40979211-40979338)
chr5 (133-231)||(31642484-31642581)
chr5 (138-244)||(38972129-38972234)
chr5 (133-243)||(43060513-43060623)
chr5 (132-236)||(9946368-9946472)
chr5 (137-237)||(16969369-16969469)
chr5 (138-247)||(18729584-18729697)
chr5 (133-237)||(12895218-12895324)
chr5 (108-247)||(21574880-21575018)
chr5 (141-244)||(25690689-25690794)
chr5 (138-247)||(30348076-30348185)
chr5 (146-237)||(600769-600860)
chr5 (137-246)||(16115-16224)
chr5 (138-188)||(33862873-33862924)
chr5 (138-244)||(36750778-36750882)
chr5 (138-247)||(14044497-14044606)
chr5 (138-202)||(15967156-15967220)
chr5 (138-244)||(4745122-4745229)
chr5 (133-247)||(10656583-10656695)
chr5 (170-237)||(19281500-19281567)
chr5 (137-247)||(11980711-11980821)
chr5 (173-237)||(731961-732026)
chr5 (133-202)||(7510597-7510666)
chr5 (138-183)||(20976353-20976398)
chr5 (138-220)||(32067824-32067906)
chr5 (209-247)||(32401453-32401491)
chr5 (138-247)||(9375638-9375746)
chr5 (139-247)||(16496434-16496541)
chr5 (133-185)||(32402118-32402170)
[»] chr3 (68 HSPs)
chr3 (108-237)||(29676751-29676880)
chr3 (138-246)||(13084361-13084469)
chr3 (127-247)||(41727240-41727360)
chr3 (108-247)||(30476006-30476145)
chr3 (109-247)||(12077745-12077883)
chr3 (133-247)||(50363017-50363131)
chr3 (138-247)||(26517217-26517326)
chr3 (138-247)||(31819401-31819510)
chr3 (133-246)||(42891409-42891522)
chr3 (138-247)||(46048517-46048626)
chr3 (138-247)||(51263077-51263186)
chr3 (120-234)||(40645651-40645765)
chr3 (138-247)||(11388116-11388225)
chr3 (138-247)||(26043014-26043123)
chr3 (138-247)||(26121327-26121436)
chr3 (138-247)||(37729031-37729140)
chr3 (137-247)||(27638079-27638189)
chr3 (138-247)||(20945302-20945411)
chr3 (138-247)||(22659575-22659684)
chr3 (138-247)||(29645353-29645462)
chr3 (138-246)||(46435735-46435841)
chr3 (138-226)||(31531448-31531536)
chr3 (139-247)||(41825139-41825247)
chr3 (136-247)||(26998888-26998999)
chr3 (138-247)||(41543609-41543718)
chr3 (138-247)||(52325505-52325614)
chr3 (154-247)||(39617252-39617345)
chr3 (138-247)||(54425958-54426067)
chr3 (138-246)||(14645892-14646000)
chr3 (108-247)||(50092633-50092772)
chr3 (133-247)||(26243462-26243576)
chr3 (138-244)||(33287861-33287967)
chr3 (133-247)||(42010858-42010972)
chr3 (139-244)||(27047183-27047288)
chr3 (153-247)||(28477395-28477489)
chr3 (136-238)||(31474417-31474519)
chr3 (132-245)||(34055868-34055979)
chr3 (137-247)||(41308778-41308888)
chr3 (138-247)||(44083621-44083731)
chr3 (138-247)||(41739975-41740084)
chr3 (132-228)||(43187114-43187210)
chr3 (141-188)||(23157093-23157140)
chr3 (138-244)||(2421080-2421185)
chr3 (161-247)||(29611852-29611938)
chr3 (138-244)||(50524981-50525087)
chr3 (138-247)||(831362-831471)
chr3 (138-247)||(21864294-21864401)
chr3 (126-194)||(53717581-53717649)
chr3 (141-244)||(48901522-48901625)
chr3 (141-244)||(48903088-48903191)
chr3 (138-244)||(25750522-25750628)
chr3 (141-247)||(48309443-48309548)
chr3 (139-244)||(44338078-44338182)
chr3 (172-247)||(21932955-21933030)
chr3 (173-244)||(35055816-35055887)
chr3 (170-244)||(28243786-28243860)
chr3 (137-247)||(35145234-35145335)
chr3 (138-231)||(31650683-31650776)
chr3 (151-247)||(33411977-33412071)
chr3 (133-244)||(49000442-49000552)
chr3 (139-187)||(5504604-5504652)
chr3 (138-226)||(11393917-11394005)
chr3 (138-202)||(35765693-35765757)
chr3 (138-229)||(11140700-11140791)
chr3 (138-237)||(11344553-11344651)
chr3 (172-247)||(39931910-39931985)
chr3 (146-247)||(28228182-28228283)
chr3 (138-247)||(54555926-54556035)
[»] scaffold0005 (1 HSPs)
scaffold0005 (138-244)||(214614-214720)
[»] scaffold1091 (1 HSPs)
scaffold1091 (138-247)||(1913-2022)
[»] scaffold0013 (2 HSPs)
scaffold0013 (138-244)||(49132-49238)
scaffold0013 (170-247)||(61282-61359)
[»] scaffold0012 (1 HSPs)
scaffold0012 (138-247)||(99817-99926)
[»] scaffold0038 (1 HSPs)
scaffold0038 (140-244)||(38480-38584)
[»] scaffold0182 (1 HSPs)
scaffold0182 (164-247)||(22082-22165)
[»] scaffold0699 (1 HSPs)
scaffold0699 (141-247)||(7577-7682)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 24512307 - 24512168
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| ||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||| |||||||| |||    
T  24512307 ctccgtcccttaatgtaggcatccattatctttttcacattttttaagaaaatttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaa 24512208  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     ||||||||||||||||||||||||||||| |||||||||    
T  24512207 ttgtcttttgtttgtatgtgtattaaatttgacttttcat 24512168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 25198267 - 25198394
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||  ||| |||| ||||||    
T  25198267 atgtaggcatccattgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattaccaaattgtcctttgtt 25198366  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||| |||||| |||||||||    
T  25198367 tgtatgtgtataaaatttgacttttcat 25198394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 40337331 - 40337192
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||| ||||| || |||||||||||||||||| |||||| | ||| ||||||| ||||    
T  40337331 ctccgtcccttaatgtaggcatccattgtctttttcacatttcttatgaaaagttatcagtataattaatgtgtatgttttgtatgttaatattacaaaa 40337232  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| |||||||||||||||||| || || |||||||||    
T  40337231 ttgtcctttgtttgtatgtgtatttaaattgacttttcat 40337192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 2562840 - 2562731
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  2562840 tttttcacatttcttaagaaaaactgtcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaattt 2562741  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  2562740 gacttttcat 2562731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 3113643 - 3113534
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||| |||||||| ||| |||||||||||| ||||||||||||||||    
T  3113643 tttttcacatttcttaaaaaaaattatcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattgtcttttgtttatatgtgtattaaattt 3113544  T
Q  238 aacttttcat 247  Q
    || |||||||    
T  3113543 aatttttcat 3113534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 31746515 - 31746406
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||| |||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  31746515 tttttcacatttcttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaattt 31746416  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  31746415 gacttttcat 31746406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 111 - 247
Target Start/End: Original strand, 25184999 - 25185135
Alignment:
Q  111 cgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactg 210  Q
    |||||| | ||||| ||| | |||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||| |||||||  ||| ||    
T  25184999 cgtcccttaatgtatgcacccattgcctttttcacatttcttaagaaaagttgtcagtgtaactaatgtgtctgttttgtgtgttaatattacgaaattg 25185098  T
Q  211 tcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    || ||||||||||||||||||||||||  ||||||||    
T  25185099 tcatttgtttgtatgtgtattaaatttgtcttttcat 25185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 37956111 - 37956226
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||  |||| ||||||||||||| ||||    
T  37956111 attgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaatttgtcctttgtttgtatgtatatt 37956210  T
Q  232 aaatttaacttttcat 247  Q
    | |||| |||||||||    
T  37956211 agatttgacttttcat 37956226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 38761470 - 38761359
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||||| |||| |||| |||| |||||||| ||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||    
T  38761470 tctttttcatatttattaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaat 38761371  T
Q  236 ttaacttttcat 247  Q
    || |||||||||    
T  38761370 ttgacttttcat 38761359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 24962475 - 24962369
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  24962475 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 24962376  T
Q  238 aactttt 244  Q
    |||||||    
T  24962375 aactttt 24962369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 7772497 - 7772617
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| ||||||||||| |||||| ||||||||| |||||| | ||||||||||||||||||| ||||| |||||||  ||| |||| ||| |||||||||    
T  7772497 catctattgtcttttttacattttttaagaaaagttgtcattgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttatttgtatgt 7772596  T
Q  227 gtattaaatttaacttttcat 247  Q
    ||||||||||| |||||||||    
T  7772597 gtattaaatttcacttttcat 7772617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 38773489 - 38773349
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaa-ttgtcagtataattaatgtgtctgttttatgtgtcaatattataaa 206  Q
    ||||||||| | ||||| ||| | ||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||| ||||| || ||||  ||    
T  38773489 ctccgtcccttaatgtaggcaaccattgtctttttcacatttcttaaaaaaaagttgtcagtgcaattaatgtgtctgttttgtgtgttaacattacgaa 38773390  T
Q  207 actgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    | |||||||||||||||||||||| |||||| | |||||||    
T  38773389 attgtcttttgtttgtatgtgtatgaaatttgatttttcat 38773349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 41086971 - 41087079
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||| |||||||| ||| | || ||||||||||||||||||||||||     
T  41086971 ttttcacatttcttaagaaatattgtcagtgtaattaatgtgtctgatttgtgtgttaatattatcaaattttcctttgtttgtatgtgtattaaatttg 41087070  T
Q  239 acttttcat 247  Q
    | |||||||    
T  41087071 atttttcat 41087079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 57304 - 57189
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||| |||||||  ||| |||  ||| ||||||||||||||    
T  57304 attgtttttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttctttatttgtatgtgtatt 57205  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  57204 aaatttgacttttcat 57189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 37141722 - 37141829
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||| |||| |||||||| |||||||||| |||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  37141722 tttttcacattttttaaaaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaattt 37141821  T
Q  238 aacttttc 245  Q
     |||||||    
T  37141822 gacttttc 37141829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 38770303 - 38770188
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||||||||||| ||||||||||| || |||||||| |||||||||||| | |||| ||||| |||||||  ||| |||| ||||||||||||||||||    
T  38770303 attgtctttttcatatttcttaagataagttgtcagtgtaattaatgtgtttattttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtatt 38770204  T
Q  232 aaatttaacttttcat 247  Q
    || ||| |||||||||    
T  38770203 aattttgacttttcat 38770188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 12998808 - 12998694
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||  | |||| ||||| |||||||  ||| |||| |||||||||||||||||||    
T  12998808 ttgtctttttcacatttcttaagaaaagttgtcagttcaattaatgtgcatattttgtgtgtgaatattactaaattgtcctttgtttgtatgtgtatta 12998709  T
Q  233 aatttaacttttcat 247  Q
    ||||| || ||||||    
T  12998708 aatttgacctttcat 12998694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 17933700 - 17933810
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaa-tattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||| ||||||||||||||  | |||||||||||||| |||| ||||| || |||||  |||||||| |||||||||||||||||||||||    
T  17933700 tttttcacatttcgtaagaaaaattgtcgatgtaattaatgtgtctattttgtgtgttaaatattaccaaactgtcatttgtttgtatgtgtattaaatt 17933799  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  17933800 tgacttttcat 17933810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 37600999 - 37600889
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||| ||||||||  |||| ||||||||||||||||||| ||||||||| |||| |   ||| | ||||||||||||||||||||||||||    
T  37600999 ctttttcacattttttaagaaatgttgtaagtataattaatgtgtctgatttatgtgttaatactgccaaattatcttttgtttgtatgtgtattaaatt 37600900  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  37600899 tgacttttcat 37600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 43980693 - 43980587
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| | || ||||||||||||||||||||||||    
T  43980693 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcatttgtttgtatgtgtattaaattt 43980594  T
Q  238 aactttt 244  Q
     ||||||    
T  43980593 gactttt 43980587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 45185383 - 45185269
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||| |||||||||||||||||||||| |||||  | |||| |||||||||||||||||| | |||||||| ||| |||| ||||||||||||||||||    
T  45185383 attgtatttttcacatttcttaagaaaagttgtcgttgtaataaatgtgtctgttttatgtattaatattatcaaattgtcctttgtttgtatgtgtatt 45185284  T
Q  232 aaatttaacttttca 246  Q
     | ||| ||||||||    
T  45185283 cattttgacttttca 45185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 7172215 - 7172324
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || |  || |||||||||||||| |||| ||||| |||||||||||| |||| |||||||||||||| |||||| ||    
T  7172215 tttttcacatttcttaagaaaactttttggtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcatttgtttgtatgtgcattaaaatt 7172314  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  7172315 gacttttcat 7172324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 34882666 - 34882775
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||||| | |  ||||||||||||| |||| ||||| |||||||| ||| | |||||||||||||||||| ||||||||    
T  34882666 tttttcacattttttaagaaaaattgttaatgcaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtgttaaattt 34882765  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  34882766 gacttttcat 34882775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 43191587 - 43191478
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||||||||||| ||| | | || ||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  43191587 ttttttacatttcttaagaaaaaatgttaatttagttaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 43191488  T
Q  238 aacttttcat 247  Q
    || |||||||    
T  43191487 aaattttcat 43191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 885458 - 885565
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||||||| |||||| | |||||||||  ||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  885458 tttttcacatttattaagaaaagttgtcagtgtaattattatgtctgtttg-tgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaattt 885556  T
Q  238 aacttttca 246  Q
     ||||||||    
T  885557 gacttttca 885565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 39543779 - 39543661
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattat---aaaactgtcttttgtttgtatgtgt 228  Q
    |||| |||||||| |||||||||||||  ||||| || ||||||||||||||||||| || || ||||||||    ||| ||||||||||||||||||||    
T  39543779 attgcctttttcatatttcttaagaaatgttgtccgtgtaattaatgtgtctgttttgtgcgttaatattattaccaaattgtcttttgtttgtatgtgt 39543680  T
Q  229 attaaatttaacttttcat 247  Q
    ||||||||| |||||||||    
T  39543679 attaaatttgacttttcat 39543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 38203104 - 38202993
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||||||||||||||| |||| ||||| || |||||||| ||| |||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||    
T  38203104 tctttttcacatttcttaataaaagttgtcggtgtaattaatatgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaat 38203005  T
Q  236 ttaacttttcat 247  Q
    || | |||||||    
T  38203004 ttgatttttcat 38202993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 14847031 - 14846925
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| ||||| || ||||||||||||||| ||| || || |||||||  | | |||||||||||||||||||||||||||||    
T  14847031 tttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgctttgtgcgttaatattaccatattgtcttttgtttgtatgtgtattaaattt 14846932  T
Q  238 aactttt 244  Q
     ||||||    
T  14846931 gactttt 14846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 26878839 - 26878733
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||||||| |||| | | |||||||||||||| |||| ||||| |||||||  ||| |||| ||||||||||||| |||||||||    
T  26878839 ctttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtatattaaatt 26878740  T
Q  237 taacttt 243  Q
    | |||||    
T  26878739 tgacttt 26878733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 14577762 - 14577653
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| |||| | ||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  14577762 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtttgttaatattaccaaattgtactttgtttgtatgtgtattaaattt 14577663  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  14577662 gatttttcat 14577653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 16002834 - 16002727
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||| ||||| ||||| |||||||  ||| | || ||||||||||| |||||||||||    
T  16002834 ctttttcacattttttaagaaaagttgtctgtgtaattaatgtgtcagttttgtgtgttaatattaagaaattatcctttgtttgtatttgtattaaatt 16002735  T
Q  237 taactttt 244  Q
    | ||||||    
T  16002734 tgactttt 16002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 24276666 - 24276562
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||  | || ||||| |||||||  ||| |||| |||||||||||||||||||||||    
T  24276666 ctttttcacatttcttaaaaaaagttgttagtataattaatgtgtc--tattgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatt 24276569  T
Q  237 taacttt 243  Q
    | |||||    
T  24276568 ttacttt 24276562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 25888586 - 25888700
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||| |||||||||||||||| |||| ||| |||||||| ||||| |||| | ||| |||||||| | | |||| |||||||||||||||||||    
T  25888586 ttgtattttttacatttcttaagaaaagttgttagtgtaattaatatgtctattttgtatgttaatattatcatattgtcatttgtttgtatgtgtatta 25888685  T
Q  233 aatttaacttttcat 247  Q
    ||||| | |||||||    
T  25888686 aatttgatttttcat 25888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 36437496 - 36437606
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||| ||||||| |||||||||| ||| |||  ||||||||||||| |||| ||||| || ||||  ||| |||| |||||||||||||||||||||||    
T  36437496 cttttccacattttttaagaaaaaatgttagtgcaattaatgtgtctattttgtgtgttaacattaccaaattgtcctttgtttgtatgtgtattaaatt 36437595  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  36437596 tgacttttcat 36437606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 4274024 - 4273955
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatt 201  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||||||||| ||||||    
T  4274024 attgtctttttcacatttcttaagaaatattgttagtgtaattaatgtgtttgttttatgtgttaatatt 4273955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 5191658 - 5191550
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||||||| ||||| |||||||  ||| ||||  |||||| ||||||||||||||||    
T  5191658 tttttcacatttcttaagaaaaattgttaggc-aattaatgtgtctgttttgtgtgttaatattaccaaattgtccattgtttatatgtgtattaaattt 5191560  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  5191559 gatttttcat 5191550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 36309674 - 36309597
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||| ||||| |||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  36309674 taattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 36309597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 10396338 - 10396233
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||||| | |||||||||| |  ||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  10396338 tttttcacatttattaagaaaagttgtcaatgtaattaatgttt--gttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaattt 10396241  T
Q  238 aacttttc 245  Q
     |||||||    
T  10396240 gacttttc 10396233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 31252763 - 31252656
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||| |||||||  |||    | |||||||| |||||||||||||||     
T  31252763 ttttcacatttcttaa-aaaaattatcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaataaacatttgtttgcatgtgtattaaatttg 31252665  T
Q  239 acttttcat 247  Q
    |||||||||    
T  31252664 acttttcat 31252656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 40517739 - 40517842
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||||||  |||   ||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  40517739 tttttcacattttttaagaaaagttgtcagagtaa---atgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaattt 40517835  T
Q  238 aactttt 244  Q
     ||||||    
T  40517836 gactttt 40517842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 44255448 - 44255555
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||| |||||||||  ||| ||  ||||||||||| || |||| ||||| |||||||| ||| |||| |||||||||| ||||||||||||    
T  44255448 ctttttcacatttgttaagaaaagatgtgagcgtaattaatgtgccttttttgtgtgttaatattatcaaattgtcatttgtttgtacgtgtattaaatt 44255547  T
Q  237 taactttt 244  Q
    | ||||||    
T  44255548 tgactttt 44255555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 246
Target Start/End: Complemental strand, 45183965 - 45183863
Alignment:
Q  144 acatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttt 243  Q
    |||||||||||||||| ||||||   |||| ||| ||| |||||||||||| |||||||  ||| |||| ||||||| |||||||||||||||| |||||    
T  45183965 acatttcttaagaaaagttgtcatagtaataaatatgtttgttttatgtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgacttt 45183866  T
Q  244 tca 246  Q
    |||    
T  45183865 tca 45183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 1177265 - 1177157
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| || | ||| ||||||||||||||||||| | | | |||||||  ||| |||||||| ||||||||||||||||||||    
T  1177265 tttttcacattttttaagaaaagttat-agtgtaattaatgtgtctgttttgtatattaatattacgaaattgtcttttatttgtatgtgtattaaattt 1177167  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  1177166 gatttttcat 1177157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 40790785 - 40790893
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||| ||| ||| | |||||||  ||| |||| ||||||||||| |||| |||||||    
T  40790785 tttttcacatttcttaagaaaagttgtcagtgtaattaatgcgtctg-tttgtgtattaatattaccaaattgtcatttgtttgtatatgtaataaattt 40790883  T
Q  238 aacttttcat 247  Q
     ||| |||||    
T  40790884 gactattcat 40790893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 41541550 - 41541652
Alignment:
Q  143 cacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactt 242  Q
    ||||||||||||||||||| || |||| || |||||||||| |||| |||||||||||||| ||| |||| ||| ||  ||| |||||||||||| ||||    
T  41541550 cacatttcttaagaaaaatagttagtacaactaatgtgtctattttgtgtgtcaatattatcaaattgtcctttatt--tatatgtattaaatttgactt 41541647  T
Q  243 ttcat 247  Q
    |||||    
T  41541648 ttcat 41541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 3006893 - 3006785
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||| |||| |||||||||||||| |||| |||||||||||| ||||| |||||||||| |||||||  ||| | || ||| | |||||||||||||||     
T  3006893 tcttcttcatatttcttaagaaaagttgttagtataattaatatgtctattttatgtgttaatattactaaattatcatttatctgtatgtgtattaaaa 3006794  T
Q  236 ttaactttt 244  Q
    || ||||||    
T  3006793 ttgactttt 3006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 12762871 - 12762947
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||| |||| ||||| |||||||  ||| |||| |||||||||||||||||||||||| |||||||||    
T  12762871 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 12762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 14522714 - 14522650
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||| ||||| |||||||    
T  14522714 tttttcacatttcttaagaaaaattgttagtgtaattaatgtgtatgttttgtgtgttaatatta 14522650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 45283892 - 45283828
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    ||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||| |||||||    
T  45283892 tttttcaaatttcttaagaaaaattatcaatgtaattaatgtgtctgttttatgtgttaatatta 45283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 16644146 - 16644045
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| | |||| ||||| ||||| |  ||| |||  ||||| ||||||||| ||||||||    
T  16644146 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtatattttgtgtgttaatatcactaaattgttctttgtctgtatgtgtgttaaattt 16644047  T
Q  238 aa 239  Q
    ||    
T  16644046 aa 16644045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 22590371 - 22590480
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| |||  ||||||||||||| |||| ||||| ||||| |  ||| ||||  ||||||||||  || ||||||||    
T  22590371 tttttcacatttcttaagaaaatttgttagtgcaattaatgtgtctattttttgtgttaatatcaccaaattgtccattgtttgtataagtgttaaattt 22590470  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  22590471 gacttttcat 22590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 40602151 - 40602042
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| || |||||| || | |||  |||||||||||||  ||||||||| |||||||  ||| | || ||||||||||||||||||||||||    
T  40602151 tttttcacattttttcagaaaagttattagtgcaattaatgtgtcttatttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaattt 40602052  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  40602051 gatttttcat 40602042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 35794777 - 35794847
Alignment:
Q  177 tgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||| |||| ||| | |||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  35794777 tgtgtctattttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 35794847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 34157951 - 34158012
Alignment:
Q  176 atgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  34157951 atgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 34158012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 31673593 - 31673700
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| ||||  || |||||||||||| | |||| | ||| |||||||  ||| | || ||||||||||||||||||||||||    
T  31673593 tttttcacattttttaagaaaagttgtg-gtgtaattaatgtgtttattttgtatgttaatattaccaaattatcctttgtttgtatgtgtattaaattt 31673691  T
Q  238 aacttttca 246  Q
     ||| ||||    
T  31673692 gactattca 31673700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 34869831 - 34869935
Alignment:
Q  143 cacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactt 242  Q
    ||||||| ||||||||||||||| || ||| |||||||| | |||| ||| | |||||||| ||| |||| ||||||| | |||| || |||||| ||||    
T  34869831 cacattttttaagaaaaattgtcggtgtaactaatgtgtatattttgtgtattaatattatcaaattgtcatttgtttatctgtgcataaaatttgactt 34869930  T
Q  243 ttcat 247  Q
    |||||    
T  34869931 ttcat 34869935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 30262615 - 30262540
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttca 246  Q
    ||||||||||||| |||| | ||| |||||||  ||| |||| ||||||||||||||| |||||| ||||||||||    
T  30262615 aattaatgtgtctattttgtatgttaatattaccaaattgtcatttgtttgtatgtgtcttaaatctaacttttca 30262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 35709183 - 35709100
Alignment:
Q  164 tcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||| || |||||||||||  ||||||||| |||||||| ||| ||||||| || | | |||||||||||||| |||||||||    
T  35709183 tcagtgtagttaatgtgtctagtttatgtgttaatattatcaaattgtctttcgtatatgtgtgtattaaatttgacttttcat 35709100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 14739433 - 14739522
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||| ||||||||| ||||| || |||||||||||| | |||||| ||| |||||||  ||| | || ||||||||| ||||||||||||    
T  14739433 attttttaagaaaagttgtccgtgtaattaatgtgtttattttatatgttaatattaccaaattatcctttgtttgtgtgtgtattaaat 14739522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 23399835 - 23399778
Alignment:
Q  190 tgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||| |||||||  ||| |||| |||||||||||||||||||||||| |||||||||    
T  23399835 tgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 23399778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 45203755 - 45203863
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||  || | |||  ||||||||||||| |||| | ||| |||||||  ||  |||| |||||||||||| |||||||||||    
T  45203755 ttttttacatttcttaagaaatttttt-agtgcaattaatgtgtctattttgtatgttaatattaccaacttgtcctttgtttgtatgcgtattaaattt 45203853  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  45203854 gacttttcat 45203863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 27569 - 27660
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||| ||| | || |||| |||| |||||||||| ||| |||  ||| |||| ||||||| | | ||||||||||||    
T  27569 atttcttaagaaaaattgttagtgttatgaatgcgtctattttatgtgtgaatgttactaaattgtcatttgtttatgtatgtattaaattt 27660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 25477203 - 25477330
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||| |||| ||||||    
T  25477203 atgtaggcatccattgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacaaaattgtcatttgtt 25477302  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||| |||||||||    
T  25477303 tgtatgtgtattaaatttgacttttcat 25477330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 52226009 - 52226124
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||| |||||||| ||| |||| ||||||| ||||||||||    
T  52226009 attgtctttttcacattttttaagaaatgttgtcagtataattaatgtgtctgttttatatgttaatattatcaaattgtcctttgtttatatgtgtatt 52226108  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  52226109 aaatttgacttttcat 52226124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 39237712 - 39237592
Alignment:
Q  124 acgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgta 223  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||| |||||||  ||| |||| ||||||||||    
T  39237712 acgcatccattgtctttttcacattttttaagaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcctttgtttgta 39237613  T
Q  224 tgtgtattaaatttaactttt 244  Q
    |||||||||||||| ||||||    
T  39237612 tgtgtattaaatttgactttt 39237592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 5448628 - 5448767
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| |||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| ||||| |||||||  |||    
T  5448628 ctccgtcccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttatcaatataattaatgtgtctgttttgtgtgttaatattacgaaa 5448727  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     | || |||||||||||||||||||||||| |||||||||    
T  5448728 ttatcctttgtttgtatgtgtattaaatttgacttttcat 5448767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 20262509 - 20262394
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||  ||||||||||||||||||    
T  20262509 attgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttatttgtttgtatgtgtatt 20262410  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  20262409 aaatttgacttttcat 20262394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 54438500 - 54438615
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||  ||| | || ||| ||||||||||||||    
T  54438500 attgtctttttcacatttcttaagaaaaattgtccgtataattaaagtgtctgttttgtgtgttaatattacgaaattatcctttatttgtatgtgtatt 54438599  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  54438600 aaatttgacttttcat 54438615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 39197143 - 39197035
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtct-gttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  39197143 tttttacatttcttaagaaaaattgtcactatgattaatgtgtcttgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaattt 39197044  T
Q  238 aacttttca 246  Q
     ||||||||    
T  39197043 gacttttca 39197035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 16070397 - 16070536
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||| | |||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| ||||| |||||||  |||    
T  16070397 ctccgtcccttaatgtaggcacctattgtctttttcacatttcttaagaaatgctgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaa 16070496  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     | |||||||||| ||| |||||||||||| |||||||||    
T  16070497 ttatcttttgtttatatatgtattaaatttgacttttcat 16070536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 24072757 - 24072872
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||| ||||| |||||||| ||| |||| |||| ||| |||||||||    
T  24072757 attgtcttttttacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcatttgcttgaatgtgtatt 24072856  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  24072857 aaatttgacttttcat 24072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 46729296 - 46729410
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| | ||||||||||||||||    
T  46729296 attgtctttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctatgtttgtatgtgtatt 46729394  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  46729395 aaatttgacttttcat 46729410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 43509079 - 43509185
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||  ||||| || |||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  43509079 tttttcacatttcttaagaaacgttgtc-gtgtaattaatgtgt-tgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaattt 43509176  T
Q  238 aacttttca 246  Q
    |||||||||    
T  43509177 aacttttca 43509185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 50782772 - 50782880
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| | |||||||  ||| |||| |||||||||||||||||||| |    
T  50782772 tctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtcttaatattacgaaattgtcctttgtttgtatgtgtattaact 50782871  T
Q  236 ttaactttt 244  Q
    |||| ||||    
T  50782872 ttaattttt 50782880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 5536492 - 5536602
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| |||| ||  ||| | || |||||||||||||||||||||||    
T  5536492 ctttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgcgtgttaatactacgaaattttcatttgtttgtatgtgtattaaatt 5536591  T
Q  237 taacttttcat 247  Q
    | | |||||||    
T  5536592 tgatttttcat 5536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 12624692 - 12624798
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||| || |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  12624692 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgactattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 12624791  T
Q  238 aactttt 244  Q
     ||||||    
T  12624792 gactttt 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 29584890 - 29584996
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| || | ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  29584890 tttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaattt 29584989  T
Q  238 aactttt 244  Q
     ||||||    
T  29584990 gactttt 29584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 22750951 - 22750842
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||| || |||||||||| |||||||| ||| | |||||||  ||| |||| ||||||||||||||||||||||||    
T  22750951 tttttcacatttcttaagaaaagttgtctgtgtaattaatgtatctgttttgtgtattaatattaccaaattgtcatttgtttgtatgtgtattaaattt 22750852  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  22750851 gacttttcat 22750842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 30153331 - 30153222
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||  |||||||  ||| | || ||| ||||||||||||||||||||    
T  30153331 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgataatattaccaaattatcctttatttgtatgtgtattaaattt 30153232  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  30153231 gacttttcat 30153222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 37625234 - 37625125
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||| |||||||  ||| | || ||||||| ||||||||||||||||    
T  37625234 tttttcacatttcttaagaaaagttgtcagtataattaatgtgtttattttgtgtgttaatattactaaattatcatttgtttatatgtgtattaaattt 37625135  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  37625134 gacttttcat 37625125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 41945881 - 41945773
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||  |||||||  ||| |||| ||||||||||| ||||||||||||    
T  41945881 tttttcacattttttaagaaaaattgtcagtgtaattaatgtgt-tgttttatgtgataatattacgaaattgtcctttgtttgtatatgtattaaattt 41945783  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  41945782 gacttttcat 41945773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 51787767 - 51787876
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||| |||||||  |||  | | ||||||||||||||||||||||||    
T  51787767 tttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaatagacatttgtttgtatgtgtattaaattt 51787866  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  51787867 gacttttcat 51787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 5932883 - 5932988
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||||||| |||||||||||| |||||| ||||| |||||||| ||| |||| ||||||| ||||||||||||||||    
T  5932883 tttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcatttgtttttatgtgtattaaattt 5932981  T
Q  238 aactttt 244  Q
    || ||||    
T  5932982 aattttt 5932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 14602764 - 14602658
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||  ||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  14602764 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaattt 14602665  T
Q  238 aactttt 244  Q
     ||||||    
T  14602664 gactttt 14602658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 19654424 - 19654533
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||  ||||||  ||| | || ||| ||||||||||||||||||||    
T  19654424 tttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctattttatgtgttgatattaccaaattatcatttatttgtatgtgtattaaattt 19654523  T
Q  238 aacttttcat 247  Q
    | ||||||||    
T  19654524 atcttttcat 19654533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 37175130 - 37175022
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||  || |||||||||||||| |||| ||||| |||||||  ||| ||||||||||||||||||||||||||||     
T  37175130 tttttcacatttcttaagaaaagttgtt-gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatta 37175032  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  37175031 gacttttcat 37175022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 38136351 - 38136460
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| |||| ||||| |||||||| ||| |||| |||||||||||||||| | |||||    
T  38136351 tttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtaattaattt 38136450  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  38136451 gatttttcat 38136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 20185765 - 20185656
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||   ||||| ||||| |||||||  ||| || ||||||||||||| ||||||||||||    
T  20185765 tttttcacatttcttaagaaaatttgttagtgtaattaatgtgcaagttttgtgtgttaatattaccaaattgccttttgtttgtatttgtattaaattt 20185666  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  20185665 gacttttcat 20185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 244
Target Start/End: Complemental strand, 48472623 - 48472498
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttctt-aagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgt 218  Q
    ||||| ||||| |||||||||||||||||| || ||||||| |||||||| |||||||||||||| |||| ||||| |||||||  ||| | || ||| |    
T  48472623 atgtaggcatccattgtctttttcacatttttttaagaaaagttgtcagtgtaattaatgtgtctattttgtgtgttaatattacgaaattatcctttct 48472524  T
Q  219 ttgtatgtgtattaaatttaactttt 244  Q
    |||||||||||| |||||| ||||||    
T  48472523 ttgtatgtgtatgaaatttgactttt 48472498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 54701396 - 54701290
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||| |||||  |||||   |||||| ||| |||| ||| ||||||||||||||||||||    
T  54701396 tttttcacattttttaagaaaagttgtcagtgtaattaatatgtttgtttagtgtgt---tattatcaaattgtcatttatttgtatgtgtattaaattt 54701300  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  54701299 aacttttcat 54701290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 56373453 - 56373354
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| |||  ||||||||||| | |||| ||||| |||||||  ||| |||| ||||||||| ||||||||||||||    
T  56373453 tttttcacatttcttaagaaaaattgttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgtttgtctgtgtattaaattt 56373354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 34543701 - 34543807
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||||||||||||||||| ||||| || |||||||||||||| |||| ||||| |||||||  |||   || |||||||||||||||||||| ||| ||    
T  34543701 ttcacatttcttaagaaaagttgtccgtgtaattaatgtgtctattttgtgtgttaatattaccaaataatcctttgtttgtatgtgtattaattttgac 34543800  T
Q  241 ttttcat 247  Q
    |||||||    
T  34543801 ttttcat 34543807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 52198837 - 52198731
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||| | ||| | |||||||  ||| | |||||| |||||||||||||| |||||    
T  52198837 tttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttctgtgtattaatattaccaaattatcttttatttgtatgtgtattgaattt 52198738  T
Q  238 aactttt 244  Q
     ||||||    
T  52198737 gactttt 52198731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 20291336 - 20291445
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||  | | |||||||||||||| |||| || || |||||||  ||| | || ||||||||||||||||||||||||    
T  20291336 tttttcacatttcttaagaaaagttggtaatgtaattaatgtgtctattttgtgggttaatattactaaattatcatttgtttgtatgtgtattaaattt 20291435  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  20291436 gacttttcat 20291445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 22651460 - 22651565
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || | | | |||||||||||| | |||| | ||| |||||||  ||| |||||||||||||||||||||||||||||    
T  22651460 tttttcacatttcttaagaaaatttattaatgtaattaatgtgtttattttgtatgttaatattaccaaattgtcttttgtttgtatgtgtattaaattt 22651559  T
Q  238 aacttt 243  Q
     |||||    
T  22651560 gacttt 22651565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 28116614 - 28116505
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||| ||| |||||||| ||||| |||| ||||| ||||||   ||| | || ||||||||||||||||||||||||    
T  28116614 tttttcacattttttaagaaaagttgttagtgtaattaatatgtctattttgtgtgttaatattgccaaattatcatttgtttgtatgtgtattaaattt 28116515  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  28116514 gacttttcat 28116505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 31937485 - 31937392
Alignment:
Q  154 agaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||| |||||| | ||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||||||| ||| |||||| |||||||||    
T  31937485 agaaaagttgtcactgtaattaatgtgtctgttttgtgtgttaatattattaaattgtcatttgtttgtatgtatataaaatttgacttttcat 31937392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 41920147 - 41920038
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| |||  ||||||| | ||| |||| ||||| |||||||  ||| ||||||||||||||||||| | |||||||    
T  41920147 tttttcacatttcttaagaaaagttgttagtgcaattaatatttctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgaaataaattt 41920048  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  41920047 gacttttcat 41920038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 54359690 - 54359788
Alignment:
Q  148 ttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataa--aactgtcttttgtttgtatgtgtattaaatttaacttttc 245  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| |  || |   | || ||||||||||||||||||||||||||||    
T  54359690 ttcttaagaaaagttgtcagtataattaatgtgtctgttttatgtgttaataatattacgaaat---tgttctttgtatgtgtattaaatttaacttttc 54359786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 3684297 - 3684195
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||| |||||| || |||||||||||||| |||| ||| | |||||||| ||| | || ||||||| ||||| ||||||||||    
T  3684297 tttttcacatttattaagaaagattgtcggtgtaattaatgtgtctattttgtgtattaatattattaaattatcatttgtttatatgtatattaaattt 3684198  T
Q  238 aac 240  Q
    |||    
T  3684197 aac 3684195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 13096650 - 13096542
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||| ||| |||||||||||||||| || ||||| |||||||  ||| |||| ||||||| |||||| || ||| ||    
T  13096650 tttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcatttgtttctatgtgcataaaaatt 13096552  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  13096551 aacttttcat 13096542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 31840089 - 31840191
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||||| ||||||||||||||||||| ||| |||||||  ||| | |||| ||||| |||||||  ||| |||| |||||||||||||||||||    
T  31840089 ttgtatttttcaaatttcttaagaaaaattgttagtgtaattaa--tgtattttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtatta 31840186  T
Q  233 aattt 237  Q
    |||||    
T  31840187 aattt 31840191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 31486484 - 31486583
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| |||  ||||||||||||| |||| ||||| |||||||  ||| | || ||||||| |||| |||||||||||    
T  31486484 tttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtgttaatattactaaattatcctttgtttatatgcgtattaaattt 31486583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 20116448 - 20116555
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||| ||||||||| |||||| | |||||||||   ||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  20116448 tttttcatatttattaagaaaagttgtcaatgtaattaatgc--ctgttttgtgtgttaatattaggaaattgtcatttgtttgtatgtgtattaaattt 20116545  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  20116546 gatttttcat 20116555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 26186864 - 26186758
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| || |||||| |||  ||||||  | | | |||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  26186864 tttttcacatttcttaataataattgttagtgcaattaagatatttattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaattt 26186765  T
Q  238 aactttt 244  Q
     ||||||    
T  26186764 gactttt 26186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 32236850 - 32236936
Alignment:
Q  161 ttgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||| |||||||| |||||||||| ||||| |||||||| ||| | |  ||||||| |||||||||||||||| |||||||||    
T  32236850 ttgtcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattattctttgtttatatgtgtattaaatttgacttttcat 32236936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 33246607 - 33246501
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||| ||||||| ||||||||| |||| ||| |||||||  ||||| |||| ||||| |||||||  ||| | || |||||||||||||||||||||||    
T  33246607 cttttccacattttttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatt 33246508  T
Q  237 taacttt 243  Q
    | |||||    
T  33246507 tgacttt 33246501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 40411405 - 40411343
Alignment:
Q  185 ttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  40411405 ttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttaacttttcat 40411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 5168007 - 5168084
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||| |||||||||| || || |||||||  ||| |||| |||||||||||||||||||||||||| |||||||    
T  5168007 taattaatatgtctgttttgtgcgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaatttttcat 5168084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 5416974 - 5416872
Alignment:
Q  140 tttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaa 239  Q
    |||||||||||||||||||| ||||  || ||  |||||||||| |||| | ||| |||||||  ||| ||| ||||||||||||||||||||||||| |    
T  5416974 tttcacatttcttaagaaaagttgtttgtgta--taatgtgtctattttgtttgttaatattaccaaattgtgttttgtttgtatgtgtattaaatttga 5416877  T
Q  240 ctttt 244  Q
    |||||    
T  5416876 ctttt 5416872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 43800836 - 43800913
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||| ||||||||||| ||||| |||||||  ||| |||| |||||||||||||||||| ||||| |||||||||    
T  43800836 taattaaggtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtatttaatttgacttttcat 43800913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 21121021 - 21121069
Alignment:
Q  196 aatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  21121021 aatattatcaaactgtcttttgtttgtatgcgtattaaatttaactttt 21121069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 7002178 - 7002288
Alignment:
Q  138 tttttcacatttctt-aagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||| |||||||||||| | |  ||||||||| | | |||||||||| |||||||  ||| | || ||||||||||||||| |||||||    
T  7002178 tttttcacatttctttaagaaaaattgttaatgcaattaatgtttatattttatgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatt 7002277  T
Q  237 taacttttcat 247  Q
    | | |||||||    
T  7002278 tgatttttcat 7002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 39414232 - 39414339
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| |||  | |  ||||||| ||||| |||| ||||| |||||||| ||| | |||||||||||||||||  ||||||||    
T  39414232 tttttcatatttcttaagaaaagttgataatgcaattaatatgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtg--ttaaattt 39414329  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  39414330 gacttttcat 39414339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 44812684 - 44812607
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||| | |||||||| ||| ||||||| |||| |||| ||| ||||| |||||||||||||| |||||||||    
T  44812684 taattaatgtatttgttttatatgttaatattacaaaattgtcatttatttgtgtgtgtattaaatttgacttttcat 44812607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 52768972 - 52768903
Alignment:
Q  174 taatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttt 243  Q
    |||||||||| |||| ||||| ||||||| |||| |||| ||| |||||||||||||||||||| |||||    
T  52768972 taatgtgtctattttgtgtgtgaatattacaaaattgtcatttatttgtatgtgtattaaatttgacttt 52768903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 20293739 - 20293852
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagt----ataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaa 233  Q
    |||||||||||||||||||||| ||||||||     |||||||||||| | |||| | ||  |||||||   || |||||||||||||||| ||||||||    
T  20293739 tttttcacatttcttaagaaaagttgtcagtgtaattaattaatgtgtatattttttatgctaatattactgaattgtcttttgtttgtatttgtattaa 20293838  T
Q  234 atttaacttttcat 247  Q
    |||| ||| |||||    
T  20293839 atttgactattcat 20293852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 32107874 - 32107950
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||| | |||||| ||| | |||||||| ||| |||||||| ||||||| |||||||||||| |||||||||    
T  32107874 aattaatgtatatgttttgtgtattaatattatcaaattgtcttttatttgtatatgtattaaatttgacttttcat 32107950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 20791929 - 20792032
Alignment:
Q  144 acatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttt 243  Q
    |||||||||||||||| |||  |||  ||||||| ||||| |||| ||||| ||||||| | || | |||||| ||||||| |||||||||||| | |||    
T  20791929 acatttcttaagaaaagttggtagtgcaattaatatgtctattttgtgtgttaatattacataattatcttttatttgtatatgtattaaatttgagttt 20792028  T
Q  244 tcat 247  Q
    ||||    
T  20792029 tcat 20792032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 40411714 - 40411676
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaa 176  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  40411714 tttttcacatttcttaagaaaagttgtcagtataattaa 40411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 45628184 - 45628075
Alignment:
Q  138 tttttcacatttctt-aagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||| || ||||||| |||| ||| ||||| ||||||||||||| ||| | |||||||  ||| || | ||| ||| |||||||||||||||    
T  45628184 tttttcacatttttttaagaaaagttgttagtgtaattgatgtgtctgttttgtgtattaatattaccaaattgccctttattt-tatgtgtattaaatt 45628086  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  45628085 tgacttttcat 45628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 52676046 - 52676124
Alignment:
Q  168 tataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttca 246  Q
    |||||||||| ||||| |||| ||| | |||||||| ||| |||| ||| ||| |||||||||||||||| ||||||||    
T  52676046 tataattaatatgtctattttttgtattaatattattaaattgtcctttatttatatgtgtattaaatttgacttttca 52676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 3094178 - 3094263
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgta 223  Q
    ||||| |||||||||||||||| |||| |   |||||||||||||| |||| ||||| |||||||  ||| |||| ||||||||||    
T  3094178 tttttgacatttcttaagaaaagttgttaaagtaattaatgtgtctattttgtgtgttaatattaccaaattgtcatttgtttgta 3094263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 10602316 - 10602210
Alignment:
Q  138 tttttcacatt-tcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||| | ||||||||| |||  ||| |||||||| ||||| |||| ||||| |||||||  ||| |||||||||||    |||||||||||||    
T  10602316 tttttcacattcttttaagaaaagttggtagtgtaattaatttgtctattttgtgtgttaatattactaaattgtcttttgtt----tgtgtattaaatt 10602221  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  10602220 tgacttttcat 10602210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 36513371 - 36513310
Alignment:
Q  186 tttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||| |||||||| ||| ||| |||||||||||| |||||||||||| | |||||||    
T  36513371 tttatgtgttaatattatcaaattgttttttgtttgtatatgtattaaatttgatttttcat 36513310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 52977553 - 52977656
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||| ||||| |||| |||| | |  |||| |||||||| |||||||||| |||||||| ||||| | |||| |||||||||||| | |||||    
T  52977553 tttttcacatt-cttaaaaaaagttgttaatgcaattcatgtgtctattttatgtgttaatattattaaactattttttatttgtatgtgtacttaattt 52977651  T
Q  238 aactt 242  Q
     ||||    
T  52977652 gactt 52977656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 56217091 - 56217053
Alignment:
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  56217091 tgtcctttgtttgtatttgtattaaatttaacttttcat 56217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 31917438 - 31917479
Alignment:
Q  203 taaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||    
T  31917438 taaaattgtgttttgtttgtatgtgtattaaatttgactttt 31917479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 34643466 - 34643499
Alignment:
Q  214 tttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||||||||||| |||||||    
T  34643466 tttgtttgtatgtgtattaaatttaatttttcat 34643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 34011905 - 34011995
Alignment:
Q  19 gtaaagcatgatgttttttactacttttaattactcctgttctctctaaatttcctacgtacacgtttctatcatccaggcctaaatatct 109  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34011905 gtaaagcatgatgttttttactacttttaattactcttgttctctctaaatctcctacgtacacgtttctatcatccaggcctaaatatct 34011995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 16582517 - 16582637
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||||||| |||||||||    
T  16582517 catccattgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcttttatttgtatgt 16582616  T
Q  227 gtattaaatttaacttttcat 247  Q
    ||||||||||| |||||||||    
T  16582617 gtattaaatttgacttttcat 16582637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 5085227 - 5085088
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||| | |||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  |||    
T  5085227 ctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaa 5085128  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     ||||||||||||||||||||||||||||| |||||||||    
T  5085127 ttgtcttttgtttgtatgtgtattaaatttgacttttcat 5085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 15179405 - 15179512
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||| |||| |||| ||||||||||||||||||||||||    
T  15179405 tttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgcgtaaatattacaaaattgtcctttgtttgtatgtgtattaaattt 15179504  T
Q  238 aacttttc 245  Q
     |||||||    
T  15179505 gacttttc 15179512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 25269361 - 25269481
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| |||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||| |||||||  ||| | || |||||||||||||    
T  25269361 catccattgtctttttcacattttttaagaaaagttgtcagtgtaaataatgtgtctgttttatgtgttaatattacgaaattttcctttgtttgtatgt 25269460  T
Q  227 gtattaaatttaacttttcat 247  Q
    ||||||||||| |||||||||    
T  25269461 gtattaaatttgacttttcat 25269481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 33231805 - 33231944
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | |||||  |||| |||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||| |||||||  |||    
T  33231805 ctccgtcccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaa 33231904  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| |||||||||||||||||||||| | |||||||||    
T  33231905 ttgtcctttgtttgtatgtgtattaaatctgacttttcat 33231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 3143398 - 3143507
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||| ||| ||||| ||||||| |||| |||||||||||| ||||||||||||||||    
T  3143398 tttttcacatttcttaagaaaagttgtcattgtaattaatgtgtctgctttgtgtgttaatattacaaaattgtcttttgtttttatgtgtattaaattt 3143497  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  3143498 gacttttcat 3143507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 30898671 - 30898574
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||| | || ||||||||||||||||||||||    
T  30898671 tttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcctttgtttgtatgtgtattaaat 30898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 48721976 - 48721867
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  48721976 tttttcacatttcttaagaaaagctgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaattt 48721877  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  48721876 gacttttcat 48721867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 132 - 244
Target Start/End: Original strand, 8877761 - 8877873
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||  ||| |||| ||||||||||||||||||    
T  8877761 attgcctttttcatattttttaagaaaaattgtcagtataattaatgtgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtatt 8877860  T
Q  232 aaatttaactttt 244  Q
    |||||| ||||||    
T  8877861 aaatttgactttt 8877873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 29140773 - 29140653
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| |||| ||||||||||||||||||||||| ||| | || ||||||||||||||||||| ||| | ||||||| |||| |||| |||||||||||||    
T  29140773 catctattgcctttttcacatttcttaagaaaagttgccggtgtaattaatgtgtctgttttgtgtattaatattacaaaattgtcctttgtttgtatgt 29140674  T
Q  227 gtattaaatttaacttttcat 247  Q
    ||||||||||| |||||||||    
T  29140673 gtattaaatttgacttttcat 29140653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 36084959 - 36085074
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||| |||||||| ||||| |||||||  ||| | || ||| ||||||||||||||    
T  36084959 attgtctttttcacattttttaagaaaaattatcagtgtaattaatgtatctgttttgtgtgttaatattaagaaattatcctttatttgtatgtgtatt 36085058  T
Q  232 aaatttaacttttcat 247  Q
    ||||||||||||||||    
T  36085059 aaatttaacttttcat 36085074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 8984769 - 8984660
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||| |||||||| ||| ||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  8984769 tttttcacattttttaaggaaaattgttagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 8984670  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  8984669 gacttttcat 8984660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 23982700 - 23982591
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||| ||||| |||||||| ||| || | ||||||||||| ||||||||||||    
T  23982700 tttttcacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattatcaaattgacatttgtttgtatatgtattaaattt 23982601  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  23982600 gacttttcat 23982591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 35001384 - 35001273
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| ||||||||| |||||||| |||| ||  |||||||||| ||||| ||| |||| ||| |||| ||||||||||||||||||    
T  35001384 attgtctttttcacatttattaagaaaagttgtcagtgtaatcaaaatgtctgttttgtgtgttaatgttatgaaattgtcctttgtttgtatgtgtatt 35001285  T
Q  232 aaatttaacttt 243  Q
    ||||||||||||    
T  35001284 aaatttaacttt 35001273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 38680470 - 38680569
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| |||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  38680470 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaattt 38680569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 15512889 - 15512783
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  15512889 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 15512790  T
Q  238 aactttt 244  Q
     ||||||    
T  15512789 gactttt 15512783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 28949072 - 28948966
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  28949072 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 28948973  T
Q  238 aactttt 244  Q
     ||||||    
T  28948972 gactttt 28948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 2342899 - 2343008
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||||| ||| || ||||||||||| |||| ||||| |||||||  ||| |||||||||||||| ||||||||||||||    
T  2342899 tttttcacattttttaagaaaaattgttagtttacttaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtgtgtgtattaaattt 2342998  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  2342999 gacttttcat 2343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 34697021 - 34696884
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| | ||| | |||||||||||||||| ||||||||| |||||||| |||||||| |||||||||| ||||| |||||||  |||    
T  34697021 ctccgtcccttaatgtagggatccactgtctttttcacattttttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattacgaaa 34696922  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttc 245  Q
     |||| |||||||||||||| || |||||| |||||||    
T  34696921 ttgtcatttgtttgtatgtgcatgaaatttgacttttc 34696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 46495299 - 46495412
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| | || ||||||||||||| ||||||||||||||||||| ||||| |||||||| ||| |||| ||| ||||||||| |||||    
T  46495299 ttgtttttttcacatttttaaaaaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttatttgtatgtatatta 46495398  T
Q  233 aatttaacttttca 246  Q
    ||||| ||||||||    
T  46495399 aatttgacttttca 46495412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 4818017 - 4817906
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| ||||| || |||||| |||||  ||||| ||| | |||||||| ||| ||||||||||||||||||||||||    
T  4818017 ttgtttttttcacatttcttaagaaaagttgtcggtgtaattattgtgt--gttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtatta 4817920  T
Q  233 aatttaacttttca 246  Q
    ||||| ||||||||    
T  4817919 aatttgacttttca 4817906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 4829817 - 4829706
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| ||||| || |||||| |||||  ||||| ||| | |||||||| ||| ||||||||||||||||||||||||    
T  4829817 ttgtttttttcacatttcttaagaaaagttgtcggtgtaattattgtgt--gttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtatta 4829720  T
Q  233 aatttaacttttca 246  Q
    ||||| ||||||||    
T  4829719 aatttgacttttca 4829706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 47643536 - 47643643
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| |||||  ||||| |||||||  ||| |||| |||||||| ||||||||||||||    
T  47643536 ctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtatgttt--tgtgttaatattactaaattgtcctttgtttgcatgtgtattaaatt 47643633  T
Q  237 taacttttca 246  Q
    | ||||||||    
T  47643634 tgacttttca 47643643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 20564770 - 20564879
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||  ||| ||| ||||||||||  ||||||||| ||||||| |||| ||||||||||||| |||||||||||||||    
T  20564770 tttttcacatttgttaagaaaagttgatagtgtaactaatgtgtctactttatgtgttaatattacaaaattgtcttttgtttgaatgtgtattaaattt 20564869  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  20564870 gacttttcat 20564879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 32047407 - 32047541
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||| | ||||  |||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||  |||    
T  32047407 ctccgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattacgaaa 32047506  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
     |||| ||||||||||||||  |||||||| ||||||    
T  32047507 ttgtcatttgtttgtatgtg--ttaaatttgactttt 32047541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 47754750 - 47754641
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||||| ||||||||| |||  ||||||||||||| |||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  47754750 ttttttacatttcttaaaaaaaattgttagtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaattt 47754651  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  47754650 gacttttcat 47754641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 6282463 - 6282563
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||||| |||| ||||||||||||| |||| ||||||||||||| |||||||||| |||||||||||| |||| ||||||| ||| ||||||    
T  6282463 attggctttttcacgtttcataagaaaaattgttagtacaattaatgtgtctattttatgtgttaatattataaaattgtcctttgtttatatatgtatt 6282562  T
Q  232 a 232  Q
    |    
T  6282563 a 6282563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 28723756 - 28723652
Alignment:
Q  143 cacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactt 242  Q
    ||||||| ||||||||| |||| ||| |||||||||||||| |||| ||||| |||||||  ||| | ||||||||||||||||||||||||||| ||||    
T  28723756 cacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgactt 28723657  T
Q  243 ttcat 247  Q
    |||||    
T  28723656 ttcat 28723652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 44395524 - 44395639
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||| ||||||||||||||||||||  |||||||| |||||||| ||| | |||||||||| ||||||| |||| | || ||||||||||||| ||||    
T  44395524 attgtccttttcacatttcttaagaaatgttgtcagtgtaattaatatgtttattttatgtgttaatattacaaaattatcctttgtttgtatgtatatt 44395623  T
Q  232 aaatttaacttttcat 247  Q
    |||||| | |||||||    
T  44395624 aaatttgatttttcat 44395639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 9675804 - 9675666
Alignment:
Q  109 tccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaac 208  Q
    |||||||| | ||||| ||| | |||| |||||| || ||||||||||||| |||||||| |||||||| |||||| ||| ||||| |||||||  |||     
T  9675804 tccgtcccttaatgtaggcacccattgacttttttacgtttcttaagaaaagttgtcagtgtaattaatttgtctgatttgtgtgttaatattacgaaat 9675705  T
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| ||| |||||||||||||||||||| ||| |||||    
T  9675704 tgtcctttatttgtatgtgtattaaatttgactattcat 9675666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 44163227 - 44163321
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    ||||||||||||||||| |||| || ||||| |||||||||||| |||||| ||||| |||||||| ||| |||| |||||||||||||||||||    
T  44163227 tttttcacatttcttaaaaaaagttatcagtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtatta 44163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 13723586 - 13723477
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| |||  ||||||||||||| |||| ||| | |||||||  ||| | || ||||||||||||||||||||||||    
T  13723586 tttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtattaatattaccaaattatcctttgtttgtatgtgtattaaattt 13723487  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  13723486 gacttttcat 13723477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 32152153 - 32152262
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||  ||  ||||||||||||| |||| ||||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  32152153 tttttcacatttcttaagaaaagttgttggtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaattt 32152252  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  32152253 gacttttcat 32152262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 34102331 - 34102440
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||| |||||||||||| ||| | ||||||||||||||||||| ||||| |||||||| ||| | |  ||||||||||||| ||||||||||    
T  34102331 tttttcaaattttttaagaaaaattttcattgtaattaatgtgtctgttttgtgtgttaatattatcaaattattctttgtttgtatgtttattaaattt 34102430  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  34102431 gacttttcat 34102440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 35366092 - 35365983
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| ||||||||  |||| |||| ||| ||| |||||| ||| |||| ||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  35366092 tttttcatatttcttactaaaagttgttagtgtaagtaatgtatctattttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaattt 35365993  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  35365992 gacttttcat 35365983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 44335284 - 44335395
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgt---attaaa 234  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| |||||||||| ||||   ||||||    
T  44335284 tttttcacatttcttaataaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtacgtgtataattaaa 44335383  T
Q  235 tttaacttttca 246  Q
    ||| ||||||||    
T  44335384 tttgacttttca 44335395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 52141285 - 52141177
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatg--tgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||||||||||| |||||||||||| | ||| |||||||||  ||||| |||| ||||| |||||||| ||| | |||||||||||||||||||||||||    
T  52141285 tttttcacattttttaagaaaaattattagtgtaattaatgcgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtattaaat 52141186  T
Q  236 ttaactttt 244  Q
    || ||||||    
T  52141185 ttgactttt 52141177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 51996958 - 51997058
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttc 245  Q
    |||||||||||||| |||||||| |||||||| ||| |||||| ||||| |||||||  |||  ||| |||||||||||||||||||||||| |||||||    
T  51996958 atttcttaagaaaagttgtcagtgtaattaatttgtatgttttctgtgttaatattaccaaatcgtcctttgtttgtatgtgtattaaatttgacttttc 51997057  T
Q  246 a 246  Q
    |    
T  51997058 a 51997058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 5322161 - 5322022
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| |||| |||||||| |||| ||||||||| || ||| | ||||||||||||||||||| |||||  ||||||  |||    
T  5322161 ctccgtcccttaatgtaggcatctattgcctttttcatattttttaagaaaagttatcaatgtaattaatgtgtctgttttgtgtgtttatattacgaaa 5322062  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||  ||||||||||| ||||||||| || |||||||||    
T  5322061 ttgttatttgtttgtatatgtattaaaattgacttttcat 5322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 25258325 - 25258431
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||| ||||||||| |||| |||  ||||||||||||| |||||||| |  ||||||  ||| |||| ||||||||||||||||||||||||    
T  25258325 tttttcatattttttaagaaaagttgttagtgcaattaatgtgtctattttatgtcttgatattaccaaattgtcctttgtttgtatgtgtattaaattt 25258424  T
Q  238 aactttt 244  Q
    |||||||    
T  25258425 aactttt 25258431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 27531094 - 27531196
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| |||||||   || |||  ||||||||||||| ||  ||||||    
T  27531094 tttttcacatttcttaagaaaagttgtcagtataattaatgtgtttgttttgtgtgttaatattacttaattgttctttgtttgtatgtataaaaaattt 27531193  T
Q  238 aac 240  Q
    |||    
T  27531194 aac 27531196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 28334329 - 28334267
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgt 194  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  28334329 attgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgt 28334267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 30336054 - 30336163
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||| || |||||||||||||| |||| ||||| |||||||  ||| |||| ||||||| |||| |||| ||||||    
T  30336054 tttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttctatgcgtataaaattt 30336153  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  30336154 gaattttcat 30336163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 31305313 - 31305422
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| ||||  || |||||||||||||| |||| | ||  |||||||  ||| |||| ||||||||||||||||||||||||    
T  31305313 tttttcacatttattaagaaaagttgttggtgtaattaatgtgtctattttgtatgctaatattaccaaattgtcctttgtttgtatgtgtattaaattt 31305412  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  31305413 gacttttcat 31305422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 24414994 - 24415104
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||| |||||| ||||| || |||||| || |||||||||| ||| |||| ||||| |||||||  ||| | || |||||||||||||||||||||||    
T  24414994 cttttttacatttattaagtaatattgtcggtgtaattaatgtatctcttttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatt 24415093  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  24415094 tgacttttcat 24415104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 44652965 - 44652860
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    ||||||||||||||||||||   ||| ||| ||||||||||||||||||| ||| | |||||||  | | |||  ||||||||||||||||||||||||     
T  44652965 ttttcacatttcttaagaaa---tgttagtgtaattaatgtgtctgttttgtgttttaatattaccacattgttctttgtttgtatgtgtattaaatttg 44652869  T
Q  239 acttttcat 247  Q
    |||||||||    
T  44652868 acttttcat 44652860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 4813570 - 4813461
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| | |  ||||||||||||| |||| ||||| |||||||  ||| | |  ||||||||||||||| ||||||||    
T  4813570 tttttcacatttcttaagaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattaccaaattattctttgtttgtatgtgtgttaaattt 4813471  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  4813470 gacttttcat 4813461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 41737124 - 41737219
Alignment:
Q  142 tcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||| |||| ||| |||||||  ||||| |||| ||||| |||||||  ||| |||||||||||||||||||| ||||||||    
T  41737124 tcacacttcttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgttttaaattt 41737219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 246
Target Start/End: Original strand, 46591110 - 46591205
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttca 246  Q
    ||||||||| |||| ||| |||||||||||| |||||| ||||| ||||||||  || |||| ||||||| |||||||||||||||| | ||||||    
T  46591110 ttaagaaaagttgtgagtgtaattaatgtgtttgttttgtgtgttaatattatcgaattgtcctttgtttctatgtgtattaaatttgatttttca 46591205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 31808079 - 31807981
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||| ||||| |||||| |||| ||| |||||||||||||| |||| ||||| |||||||  ||| | ||||||||||| |||||||| ||||||    
T  31808079 ttttcacacttcttgagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgcatgtgtatcaaattt 31807981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 25063241 - 25063314
Alignment:
Q  174 taatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||| ||||| |||||||   || |||| |||||||||||||||||||||||| |||||||||    
T  25063241 taatgtgtctgttttgtgtgttaatattacctaattgtcctttgtttgtatgtgtattaaatttcacttttcat 25063314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 32144306 - 32144415
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||| ||||  ||  | ||||||||||| |||| || || |||||||  ||| |||| ||||||||||||||||| ||||||    
T  32144306 ttttttacatttcttaagaaaagttgttggtgcatttaatgtgtctattttgtgcgttaatattaccaaattgtcatttgtttgtatgtgtataaaattt 32144405  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  32144406 gacttttcat 32144415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 47071037 - 47070960
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||||||||| |||||||  ||| |||| |||||||||||| ||||||||||| | |||||||    
T  47071037 taattaatgtgtctattttatgtgttaatattaccaaattgtcatttgtttgtatgcgtattaaatttgatttttcat 47070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 50692405 - 50692494
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgt 228  Q
    ||||||||||||||||||||| |||||| |  ||||||||||||| |||| ||||| | |||||  ||| |||| |||||||||||||||    
T  50692405 ttttcacatttcttaagaaaagttgtcaatgcaattaatgtgtctattttgtgtgttagtattaccaaattgtcctttgtttgtatgtgt 50692494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 5852987 - 5852850
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| | | |||||||||||| || |||| ||||  ||| ||| | || ||||||||||||  ||||||||||| ||||||   |||    
T  5852987 ctccgtcccttaatgtaggtaccaattgtcttttacatatttgttaaagaaagttgccggtgtaattaatgtgt--gttttatgtgttaatattccgaaa 5852890  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| |||||||| ||||||||||||||| |||||||||    
T  5852889 ttgtcctttgtttgcatgtgtattaaatttgacttttcat 5852850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 10160713 - 10160816
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||       || || |||||||| |||   || |||||||||||||||||||||||    
T  10160713 ctttttcacatttcttaagaaaagttatcagtgtaattaatgtgtc-------tgcgttaatattatgaaatattcatttgtttgtatgtgtattaaatt 10160805  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  10160806 tgacttttcat 10160816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 28679933 - 28679831
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| |||| |||| |||| | |  ||||||||||||| |||| ||||| |||||||| ||| ||| ||||||||||||||||||||    
T  28679933 ttgtatttttcacattt-ttaaaaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattattaaattgt-ttttgtttgtatgtgtatta 28679836  T
Q  233 aattt 237  Q
    |||||    
T  28679835 aattt 28679831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 34012070 - 34012134
Alignment:
Q  156 aaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgttt 220  Q
    |||| ||||||||  |||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  34012070 aaaagttgtcagtgcaattaatgtgtctgttttatgtgttaatattatgaaattgtcttttgttt 34012134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 51390643 - 51390536
Alignment:
Q  138 tttttcacatttcttaa-gaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||| ||| |||||| | |  ||||||||||||| |||| |||||   |||||  ||| |||| |||||||||||||||||||||||    
T  51390643 tttttcacatttcttaaagaagaattgttaatgcaattaatgtgtctattttgtgtgt---tattaccaaattgtcatttgtttgtatgtgtattaaatt 51390547  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  51390546 tgacttttcat 51390536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 3143847 - 3143747
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||||| || ||||||||||| |||  ||| |||||||||||||| ||||  |||| | |||||| ||| |||||||||||||||||| |||||    
T  3143847 ttgtatttttcatatgtcttaagaaaagttgatagtgtaattaatgtgtctatttt--gtgttattattatcaaattgtcttttgtttgtatgtttatta 3143750  T
Q  233 aat 235  Q
    |||    
T  3143749 aat 3143747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 13145439 - 13145522
Alignment:
Q  164 tcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||| ||||| |||||||||| | ||| |||||||  ||| |||| |||||||||||||| ||||||||| |||||||||    
T  13145439 tcagtatagttaatatgtctgttttgtatgttaatattaccaaattgtcctttgtttgtatgtgcattaaatttgacttttcat 13145522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 3831044 - 3831151
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| || |||||   |||||||| ||| |||| ||||| |||||||  ||| |||| ||||||||||||| | ||||||||    
T  3831044 tttttcacattttttaagaaaagttatcagtt--attaatgtatctattttgtgtgttaatattacgaaattgtcatttgtttgtatgtatgttaaattt 3831141  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  3831142 gacttttcat 3831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 10842324 - 10842431
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| | |  ||||||| ||||| ||||  |||| |||||||  ||| | || ||||||||||||||| ||||||||    
T  10842324 tttttcacatttcttaagaaaagttgttaatgcaattaatatgtctatttt--gtgttaatattaccaaattatcgtttgtttgtatgtgtgttaaattt 10842421  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  10842422 gacttttcat 10842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 3072147 - 3072241
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||| |||| |||  ||||||||||| | |||||||||| |||||||| ||| ||  |||| ||| |||||||||||||||| |||||||||    
T  3072147 ttaagaaaagttgttagtgcaattaatgtgtttattttatgtgttaatattattaaattg--ttttttttttatgtgtattaaatttgacttttcat 3072241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 13352832 - 13352917
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    ||||||||||||||||||  | || |||  |||||||||||||||||||||||| |||||||  ||| |||| ||| |||||||||    
T  13352832 ttcacatttcttaagaaatgtagttagttcaattaatgtgtctgttttatgtgttaatattagcaaattgtcatttatttgtatgt 13352917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 15457923 - 15457814
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| ||||||||| |||| |||| |||| | ||||| | | | |||| ||||  |||||||| ||| |||| ||||||||||||||||||||||||    
T  15457923 tttttcatatttcttaaaaaaagttgttagtacagttaatatatttattttgtgtgataatattatcaaattgtcatttgtttgtatgtgtattaaattt 15457824  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  15457823 gatttttcat 15457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 34331871 - 34331979
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||| ||||||||| |||| || |||||||||| |||| ||||| | || ||   || | |||||||||| ||||||||||||||||    
T  34331871 tttttcacattt-ttaaaaaaaattgttagtacaactaatgtgtctattttgtgtgtgagtagtactgaattatcttttgtttatatgtgtattaaattt 34331969  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  34331970 gacttttcat 34331979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 15911655 - 15911563
Alignment:
Q  143 cacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||||||||||||| |||| ||| || ||||||||||| |||| ||||| |||||||  |||    | ||||||||||||||||||||||    
T  15911655 cacatttcttaagaaaagttgttagtgtacttaatgtgtctattttgtgtgttaatattaccaaataaccatttgtttgtatgtgtattaaat 15911563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 36389055 - 36389146
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||| ||| || | ||||||| ||||| |||||| ||| | |||||| ||| |||||||| ||| || |||||||||||||    
T  36389055 atttcttaagaaaaaatgttagcacaattaatatgtctattttatttgtaattattattaaattgtcttttatttatacgtgtattaaattt 36389146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 40702426 - 40702512
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||   ||| || ||||||||||| ||||||| || |||||||| ||| ||| |||||||| |||||||||| |||||    
T  40702426 ttaagaaaaattaaaagtgtagttaatgtgtctattttatgcgtgaatattattaaattgttttttgtttatatgtgtattgaattt 40702512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 16395624 - 16395547
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||| | ||| |||||||  ||| | |||||||||||||||||| | |||||| |||||||||    
T  16395624 taattaatgtgtctattttgtatgttaatattaccaaattatcttttgtttgtatgtgtgtaaaatttgacttttcat 16395547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 29302575 - 29302494
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatt 201  Q
    ||||| ||||| |||  ||||||||||||||||||||||| |||||||| |||| ||||| | |||||| | ||| ||||||    
T  29302575 atgtaggcatccattccctttttcacatttcttaagaaaagttgtcagtgtaatcaatgtatttgttttgtatgttaatatt 29302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 47133548 - 47133463
Alignment:
Q  138 tttttcacatttcttaagaaaaa-ttgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgt 222  Q
    ||||||||||||||||| ||||| |||| | | |||||||||||| | |||| ||||| |||||||| ||| |||| |||||||||    
T  47133548 tttttcacatttcttaaaaaaaaattgttaatgtaattaatgtgtttattttgtgtgttaatattattaaattgtcatttgtttgt 47133463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 291704 - 291637
Alignment:
Q  177 tgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||||| |||| | ||| |||||||  ||| |||| ||||||||||| |||||||||||||||||||    
T  291704 tgtgtctattttgtatgttaatattactaaattgtcatttgtttgtatttgtattaaatttaactttt 291637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 246
Target Start/End: Original strand, 47489902 - 47489997
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttca 246  Q
    ||||||||| |||| |||||| |||||||||||  ||||| ||| ||| |||| ||| |||| ||  ||||||| |||||| ||||||| ||||||    
T  47489902 ttaagaaaagttgtaagtatatttaatgtgtctagtttatttgtgaatcttattaaattgtcattgatttgtatttgtatttaatttaaattttca 47489997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 23393620 - 23393527
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    ||||||| |||| ||||||||| |||| | | |||||||||| ||| |||| ||| | ||| |||| ||| |||| |||||||||||||||||||    
T  23393620 tttttcatattttttaagaaaagttgttaatgtaattaatgtatctattttgtgtattaat-ttattaaattgtcatttgtttgtatgtgtatta 23393527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 48573174 - 48573140
Alignment:
Q  213 ttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||||||||||||||| |||||||    
T  48573174 ttttgtttgtatgtgtattaaatttaatttttcat 48573140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 34012558 - 34012591
Alignment:
Q  214 tttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||| ||||||||||||||||||||||||||    
T  34012558 tttgtttatatgtgtattaaatttaacttttcat 34012591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 40261592 - 40261694
Alignment:
Q  140 tttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaa 239  Q
    |||||||||||||| ||||| | || |||  ||||||||||| | |||| ||||| |||||||| ||| || | ||||||  ||| |||||||||||| |    
T  40261592 tttcacatttcttatgaaaagtagttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattgccctttgtt--tatatgtattaaatttga 40261689  T
Q  240 ctttt 244  Q
    |||||    
T  40261690 ctttt 40261694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 37673727 - 37673842
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||    
T  37673727 attgtctttttcacatttcttaagaaatgttgtgagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcttttgtttgtatgtgtatt 37673826  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  37673827 aaatttgacttttcat 37673842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 244
Target Start/End: Original strand, 36116286 - 36116423
Alignment:
Q  107 tctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaa 206  Q
    |||||||||| | ||||| ||||  |||||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||||| |||||||  ||    
T  36116286 tctccgtcccttaatgtaggcattcattgtctttttcacatttcttaagaaatgttgtcggtgtaattaatgtgtctgttttatgtgttaatattacgaa 36116385  T
Q  207 actgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    | |||| |||||||||||||||||||||||| ||||||    
T  36116386 attgtcatttgtttgtatgtgtattaaatttgactttt 36116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 4089627 - 4089500
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| | |||||||||    
T  4089627 atgtaggcatccattgactttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattatcttttgtt 4089528  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    ||||| |||||||||||| |||||||||    
T  4089527 tgtatatgtattaaatttgacttttcat 4089500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 6376242 - 6376134
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  6376242 tttttcacatttcttaagaaaaattgttagtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 6376143  T
Q  238 aacttttca 246  Q
    |||||||||    
T  6376142 aacttttca 6376134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 20123446 - 20123554
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  20123446 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaattt 20123545  T
Q  238 aacttttca 246  Q
     | ||||||    
T  20123546 gaattttca 20123554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 25750359 - 25750473
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||| ||||||| |||| |||| |||||||||||||||||||    
T  25750359 ttgtatttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtatta 25750458  T
Q  233 aatttaacttttcat 247  Q
    ||||| | |||||||    
T  25750459 aatttgatttttcat 25750473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 10685081 - 10685190
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  10685081 tttttcatatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaattt 10685180  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  10685181 gacttttcat 10685190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 21388238 - 21388346
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  21388238 tttttcacatttcttaagaaaatttgtcggtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 21388337  T
Q  238 aacttttca 246  Q
     ||||||||    
T  21388338 gacttttca 21388346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 1324698 - 1324813
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||||||||||||||||||  || ||||| ||||||||||||||||||| ||||| ||| |||| ||| |||| ||||||||||||||||||    
T  1324698 attgcctttttcacatttcttaagaaatgttatcagtgtaattaatgtgtctgttttgtgtgttaatcttatcaaattgtcatttgtttgtatgtgtatt 1324797  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  1324798 aaatttgacttttcat 1324813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 35128353 - 35128489
Alignment:
Q  109 tccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaac 208  Q
    |||||||| | ||||| ||| | ||||||||||||||||||  |||||||| |||||||| |||||||| |||||||||| ||||| |||||||| |||     
T  35128353 tccgtcccttaatgtaagcacctattgtctttttcacattt--taagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattatgaaat 35128450  T
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| |||||||||||||||||||||||| | |||||||    
T  35128451 tgtcctttgtttgtatgtgtattaaatttgaattttcat 35128489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 21809761 - 21809647
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| |||||  | ||||||||||||||||||| ||||| |||||||  ||| |||| |||||||||||||||||||    
T  21809761 ttgtatttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttttgtgttaatattactaaattgtcctttgtttgtatgtgtatta 21809662  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  21809661 aatttgacttttcat 21809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 48610245 - 48610136
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||||||| ||| | |||||||  ||| |||||||||||||||||||||||||||||    
T  48610245 tttttcacattttttaagaaaagttgtcactgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcttttgtttgtatgtgtattaaattt 48610146  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  48610145 gacttttcat 48610136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 18122162 - 18122042
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| |||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||||| |||||||  ||| | || |||||||| ||||    
T  18122162 catccattgtctttttcacatttcttaagaaaagttgtgagtgtaattagtgtgtctgttttatgtgttaatattactaaattttcctttgtttgaatgt 18122063  T
Q  227 gtattaaatttaacttttcat 247  Q
    |||| |||||| |||||||||    
T  18122062 gtataaaatttgacttttcat 18122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 40263705 - 40263816
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||||||||||||| ||||||||| ||||| || |||||||||||||||||||   ||| ||||||| |||| |||| ||||||||||||||||||||||    
T  40263705 tctttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcatttgtttgtatgtgtattaaat 40263804  T
Q  236 ttaacttttcat 247  Q
    || |||||||||    
T  40263805 ttgacttttcat 40263816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 49100661 - 49100776
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||| ||| |||||| | || |||||||| ||||||||||||||||||||||||| |||||||  ||| |||| ||||||||||||||||||    
T  49100661 attgcctttttcgcatctcttaaaataagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtatt 49100760  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  49100761 aaatttgacttttcat 49100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 31373807 - 31373698
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||| |||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  31373807 tttttcacatttcttaagaaaaattgttagggcaattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 31373708  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  31373707 gacttttcat 31373698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 37048031 - 37048140
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| ||| ||   ||| |||| ||||||||||||||||||||||||    
T  37048031 tttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatgttcccaaattgtcctttgtttgtatgtgtattaaattt 37048130  T
Q  238 aacttttcat 247  Q
    |||| |||||    
T  37048131 aactattcat 37048140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 2276686 - 2276578
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| |||| |||||||| || ||||| |||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  2276686 tttttcacatttcttaacaaaagttgtcagtgtagttaatttgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaattt 2276587  T
Q  238 aacttttca 246  Q
     ||||||||    
T  2276586 gacttttca 2276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 10595206 - 10595113
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaa 233  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |  ||||  |||||||||||||||||||||||||||||    
T  10595206 tttttcacatttcttaagaaaagttgtcagtataattaatatgtctgttttgtgtgtta--attacgaaactgtcttttgtttgtatgtgtattaa 10595113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 23876033 - 23876140
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| |||| |||| ||| || ||||| ||||  |||||||||| |||||||  ||| |||||||||||||||||||||||||||||    
T  23876033 tttttcacatttcttaaaaaaagttgttagtgtagttaatatgtccattttatgtgttaatattactaaattgtcttttgtttgtatgtgtattaaattt 23876132  T
Q  238 aacttttc 245  Q
    ||||||||    
T  23876133 aacttttc 23876140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 35960356 - 35960483
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| ||||| ||||||||||| ||||| ||||||||| |||| ||||||||||||| |||||||| |  ||||||  ||| | |||||||||    
T  35960356 atgtaagcatccattgtatttttcacattccttaaaaaaaattgttagtacaattaatgtgtctattttatgtatttatattactaaattatcttttgtt 35960455  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||| |||||||| |||||||||    
T  35960456 tgtatgtgtgttaaatttgacttttcat 35960483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 21801165 - 21801059
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||  | ||||||||||||||||||| ||||| |||||||  ||| |||| ||| ||||||||||||||||||||    
T  21801165 tttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttatttgtatgtgtattaaattt 21801066  T
Q  238 aactttt 244  Q
     ||||||    
T  21801065 gactttt 21801059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 26632842 - 26632948
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||||| ||| || ||||||||||| |||||||||| |||||||  ||| | ||||||||||||||||| |||||||||    
T  26632842 tttttcacattttttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcttttgtttgtatgtgcattaaattt 26632941  T
Q  238 aactttt 244  Q
     ||||||    
T  26632942 gactttt 26632948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 48767560 - 48767670
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttg-tttgtatgtgtattaaatt 236  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| |||| |||||||||||||||||||    
T  48767560 tttttcacatttcttaaaaaacgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgttttgtatgtgtattaaatt 48767659  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  48767660 tgacttttcat 48767670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 46783950 - 46783841
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || | |||  ||||||||||||| | |||||||| |||||||  ||| ||||||||||| |||||||||||||||||    
T  46783950 tttttcacatttcttaagaaaagttattagtgaaattaatgtgtctatcttatgtgttaatattaccaaattgtcttttgttcgtatgtgtattaaattt 46783851  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  46783850 gacttttcat 46783841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 43465229 - 43465143
Alignment:
Q  161 ttgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||| ||||||||||||||||||| ||||| | |||| | ||| ||||||||||||||||||||||||||||| |||||||||    
T  43465229 ttgtcagtgtaattaatgtgtctgttttgtgtgttagtattttcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 43465143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 37491728 - 37491619
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| |||  ||||||||||||| |||||| ||| |||||||  ||| | || ||||||||||| ||||||||||||    
T  37491728 tttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttatatgttaatattaccaaattatcctttgtttgtatatgtattaaattt 37491629  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  37491628 gacttttcat 37491619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 151 - 246
Target Start/End: Complemental strand, 5334491 - 5334396
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttca 246  Q
    |||||||||||||| ||| |||||||||||| |||||| | ||| |||||||  ||||| || |||||||||||||||||||||||| ||||||||    
T  5334491 ttaagaaaaattgttagtgtaattaatgtgtttgttttgtatgttaatattaccaaactatcatttgtttgtatgtgtattaaatttgacttttca 5334396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 36726312 - 36726174
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| |||| ||||||| ||| |||||||| |  |||| ||| |||||||||||| |||||| ||||| |||||||  |||    
T  36726312 ctccgtcccttaatgtaggcatccattgcctttttcgcatctcttaagagatgttgttagtgtaattaatgtgtttgttttgtgtgttaatattaccaaa 36726213  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| ||||||| |||||||||||||||| |||||||||    
T  36726212 ttgtcctttgttt-tatgtgtattaaatttgacttttcat 36726174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 33181291 - 33181400
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| ||||||||| |||  |||||||| || ||||||||| |||||| | | | |||||||  ||| |||| ||||||||||||||||||||||||    
T  33181291 tttttcatatttcttaaaaaatgttgtcagtgtagttaatgtgtttgttttgtatattaatattaccaaattgtcatttgtttgtatgtgtattaaattt 33181390  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  33181391 aacttttcat 33181400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 40211392 - 40211295
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgta 229  Q
    ||||||||||||| |||| ||||||||||||||  || ||||||||||||||||||| ||||| |||||||  ||| |||| ||| ||||||||||||    
T  40211392 attgtctttttcatattttttaagaaaaattgtttgtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcatttatttgtatgtgta 40211295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 42983691 - 42983614
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||||| ||| |||||||| ||| |||||| |||||||||||||||||||||| |||||||||    
T  42983691 taattaatgtgtctcttttatatgttaatattattaaattgtcttatgtttgtatgtgtattaaatttgacttttcat 42983614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 48193611 - 48193720
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||| |||| ||||| |||||||  ||| | || ||||||| |||  |||||||||||    
T  48193611 tttttcacattttttaagaaaaattgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttatattagtattaaattt 48193710  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  48193711 gacttttcat 48193720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 19236176 - 19236067
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||| |||||||| |||| ||| ||||||||||||| ||||| | ||| |||||||  | | |||  ||||||||||||||||||||||||    
T  19236176 tttttcacatttcgtaagaaaagttgttagtgtaattaatgtgtcggttttgtatgttaatattaccatattgttctttgtttgtatgtgtattaaattt 19236077  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  19236076 gatttttcat 19236067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 26201077 - 26200968
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| || | |||  ||||| ||||||| |||| ||| | |||||||| ||| | |  ||||||||||||||||||||||||    
T  26201077 tttttcatatttcttaagaaaagttattagtgcaattattgtgtctattttgtgtattaatattatcaaattattctttgtttgtatgtgtattaaattt 26200978  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  26200977 aacttttcat 26200968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 29636149 - 29636041
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||| ||||||| ||||||||| |||||| | ||||||||||||||||||| ||||| |||||||  ||| || | ||||||| |||||||||| |||||    
T  29636149 ttttacacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattaccaaattg-cctttgtttttatgtgtatttaattt 29636051  T
Q  238 aacttttcat 247  Q
    || |||||||    
T  29636050 aatttttcat 29636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 42993297 - 42993188
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||| |||| | || |||||| |||||| |||||||||| |||||||| ||| |  | |||||| |||||||||||||||||    
T  42993297 ttttttacatttcttaagaaaagttgttaatacaattaacgtgtctattttatgtgttaatattatcaaattaacctttgttagtatgtgtattaaattt 42993198  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  42993197 gatttttcat 42993188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 27213478 - 27213592
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| |||| |||  || |||| ||||| |||| ||||| |||||||  ||| |||| ||||||||||||| |||||    
T  27213478 ttgtatttttcacatttcttaagaaaagttgttagtgcaactaatatgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtctatta 27213577  T
Q  233 aatttaacttttcat 247  Q
    || || || ||||||    
T  27213578 aaattgacatttcat 27213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 43601270 - 43601165
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||||||||||||||||| |||| | | ||||| | ||||||||||| | ||| | ||||| |||| |||| ||||||| |||||||||||||||| ||    
T  43601270 ttcacatttcttaagaaaagttgttaatgtaattgaggtgtctgttttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgac 43601172  T
Q  241 ttttcat 247  Q
    |||||||    
T  43601171 ttttcat 43601165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 28663752 - 28663860
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||  |||| | || ||||||||||||| |||| ||||| |||||||| ||| | |  ||||||||||||| ||||||||||    
T  28663752 tttttcacatttcttaagaaag-ttgttaatacaattaatgtgtctattttgtgtgttaatattatcaaattattatttgtttgtatgtatattaaattt 28663850  T
Q  238 aacttttcat 247  Q
     |||| ||||    
T  28663851 gacttctcat 28663860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 43026053 - 43026122
Alignment:
Q  175 aatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||||||| |||| ||||| |||||||| ||||| |||||||| |||||||||||||||||||| ||||    
T  43026053 aatgtgtctattttgtgtgtgaatattattaaactatcttttgtatgtatgtgtattaaatttaattttt 43026122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 27163012 - 27162907
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||| ||| |||| |||  ||||||||||| |  ||| ||| | ||||||   ||| |||| |||||||||||||||||||||||    
T  27163012 ctttttcacatttcttaagtaaagttgttagtgcaattaatgtgtat--tttgtgttttaatattgccaaattgtcatttgtttgtatgtgtattaaatt 27162915  T
Q  237 taactttt 244  Q
    ||||||||    
T  27162914 taactttt 27162907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 40740944 - 40741057
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttg--tatgtgtattaa 233  Q
    |||||||||||||||||||||||| |||| | | |||||||| ||||| |||| ||||| |||||||  ||| | || ||| ||||  ||||||| ||||    
T  40740944 tctttttcacatttcttaagaaaagttgttaatgtaattaatatgtctattttgtgtgttaatattaccaaattatcatttctttgtatatgtgtgttaa 40741043  T
Q  234 atttaacttttcat 247  Q
    |||| |||||||||    
T  40741044 atttgacttttcat 40741057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 21752524 - 21752632
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||| |||||||||||| |||| |||| |||  ||||||| ||| | |||| || || |||||||  ||| | || ||||||||||||||||||||||||    
T  21752524 ttttccacatttcttaaaaaaagttgttagtgcaattaatttgtttattttgtgggttaatattaccaaattatcatttgtttgtatgtgtattaaattt 21752623  T
Q  238 aacttttca 246  Q
     ||||||||    
T  21752624 gacttttca 21752632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 36195393 - 36195451
Alignment:
Q  144 acatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||| ||| | |||||||    
T  36195393 acatttctttagaaaaattgttagtataattaatgtgtctattttgtgtataaatatta 36195451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 47458248 - 47458194
Alignment:
Q  185 ttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaa 239  Q
    |||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||||    
T  47458248 ttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaatttaa 47458194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 21392969 - 21392896
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||||||||||| ||||  |||| |||||||  ||| | | ||||||||||||||||||||||||| ||||||    
T  21392969 aattaatgtgtctattttgagtgttaatattaccaaattatattttgtttgtatgtgtattaaatttgactttt 21392896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 29992979 - 29993080
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttc 245  Q
    |||||||||||||| |||| |||  ||||||||||||| |||| | ||| |||| ||  ||| | || ||||||||| ||| | ||||||||||||||||    
T  29992979 atttcttaagaaaagttgttagtgcaattaatgtgtctattttgtatgttaatactaccaaattatcatttgtttgtgtgtttgttaaatttaacttttc 29993078  T
Q  246 at 247  Q
    ||    
T  29993079 at 29993080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 29723427 - 29723506
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgtttt 188  Q
    ||||||||| | ||||| ||| | |||||||||||||||||| || |||||| |||||| | ||||||||||| |||||||    
T  29723427 ctccgtcccttaatgtaggcacccattgtctttttcacattt-tttagaaaatttgtcattgtaattaatgtgcctgtttt 29723506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 20124184 - 20124238
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgt 192  Q
    |||||||||||| ||||||||| ||||  || |||||||||||||| ||||||||    
T  20124184 tttttcacattttttaagaaaagttgttggtgtaattaatgtgtctattttatgt 20124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 27170003 - 27170116
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||||||||||||||||| ||  ||| |||  ||||||| ||||| |||| ||||| |||||||  ||| |||  ||||||  ||||| |||||    
T  27170003 ttgtatttttcacatttcttaagacaacatgttagtgcaattaatttgtctattttgtgtgt-aatattaccaaattgtgatttgttcatatgtctatta 27170101  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  27170102 aatttgacttttcat 27170116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 28038922 - 28038888
Alignment:
Q  213 ttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||| ||||||||||||||||||||||    
T  28038922 ttttgtttgtatttgtattaaatttaacttttcat 28038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 44648794 - 44648715
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatatt--ataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| ||||||||| |||| | ||| ||||||  || ||| ||||||| ||||||||||||||||||||| | |||||||    
T  44648794 taatcaatgtgtctattttgtatgttaatattggatcaaattgtctttagtttgtatgtgtattaaatttgatttttcat 44648715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 11302844 - 11302959
Alignment:
Q  131 aattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtat 230  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||| |||| |||| |||||||| ||||||||    
T  11302844 aattgtctttttcacatttcttaagaaaagttgttagtataattaatgtgtctgttttttgtgttaatattacaaaattgtcctttgtttgcatgtgtat 11302943  T
Q  231 taaatttaacttttca 246  Q
    ||||||| ||||||||    
T  11302944 taaatttgacttttca 11302959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 16327114 - 16327228
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||| |||||||    
T  16327114 ttgtatttttcacatttcttaagaaaagttgtcaatataattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtatta 16327213  T
Q  233 aatttaacttttcat 247  Q
    |||||||||||||||    
T  16327214 aatttaacttttcat 16327228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 197563 - 197455
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||| ||||||||||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||| |||| ||||||||||||||||||||||    
T  197563 tcttcttcacatttcttaagaaaagttatcagtataattaatgtgtttgttttgtgtgtcaatattattaaattgtcatttgtttgtatgtgtattaaat 197464  T
Q  236 ttaactttt 244  Q
    |||| ||||    
T  197463 ttaattttt 197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 5895697 - 5895836
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||||||||| |||| | | ||||||||||||||||||| ||| | |||||||  |||    
T  5895697 ctccgtcccttaatgtaggcatccattgtctttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctgttttgtgtattaatattacgaaa 5895796  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| ||| ||| ||||||||||||||||||||||||||    
T  5895797 ttgtcctttatttttatgtgtattaaatttaacttttcat 5895836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 1763809 - 1763917
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  1763809 tttttcatatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 1763908  T
Q  238 aacttttca 246  Q
     ||||||||    
T  1763909 gacttttca 1763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 15981785 - 15981899
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| ||||  || ||||||||||||||||||| ||||| |||||||  ||| |||| || |||||||||||| |||    
T  15981785 ttgtatttttcacatttcttaagaaaagttgttggtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcattagtttgtatgtgtctta 15981884  T
Q  233 aatttaacttttcat 247  Q
    |||||||||||||||    
T  15981885 aatttaacttttcat 15981899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 16350512 - 16350626
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| |||| |||| |||||||| ||||||||| ||||||||| ||||| |||||||  ||| |||| ||||||||||| |||||||    
T  16350512 ttgtatttttcacattttttaataaaagttgtcagtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtatta 16350611  T
Q  233 aatttaacttttcat 247  Q
    |||||||||||||||    
T  16350612 aatttaacttttcat 16350626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 19838927 - 19839033
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  19838927 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 19839026  T
Q  238 aactttt 244  Q
     ||||||    
T  19839027 gactttt 19839033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 12514695 - 12514586
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||| | |||||||||||||| |||  ||||||||||||| |||| ||||| |||||||  ||| |||||||||||||||||||||||||||||    
T  12514695 tttttcacatattttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaattt 12514596  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  12514595 gacttttcat 12514586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 22410953 - 22410845
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||| | ||| |||||||  ||| |||||||| ||||||||||||||||||||    
T  22410953 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttttatgttaatattaccaaattgtcttttatttgtatgtgtattaaattt 22410854  T
Q  238 aacttttca 246  Q
     || |||||    
T  22410853 gacctttca 22410845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 9461283 - 9461398
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| ||||||||  ||||| || |||||||||||| |||||||||||| |||||||  ||| | |  ||||||||||||||||||    
T  9461283 attgtctttttcacatttattaagaaatgttgtcggtgtaattaatgtgtttgttttatgtgttaatattactaaattattctttgtttgtatgtgtatt 9461382  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  9461383 aaatttgacttttcat 9461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 34513334 - 34513219
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||| ||||| |||||| ||||||||| ||||||| |||| ||||||||||||||| ||||| |||||||  ||| | || ||||||||||||||||||    
T  34513334 attgttttttttacattttttaagaaaatttgtcagcataaataatgtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtatt 34513235  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  34513234 aaatttgacttttcat 34513219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 31946022 - 31945917
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| |||| ||||| |||||||  ||| |||| ||||||| ||||||||||||||||    
T  31946022 tttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcgtttgtttatatgtgtattaaattt 31945923  T
Q  238 aacttt 243  Q
     |||||    
T  31945922 gacttt 31945917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 6791374 - 6791478
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| |||| |||||| | ||||||||||||  ||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  6791374 tttttcacatttcttaaaaaaagttgtcaatgtaattaatgtgt--gttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtattaaattt 6791471  T
Q  238 aactttt 244  Q
     ||||||    
T  6791472 gactttt 6791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 31536006 - 31536117
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||| |||||||||||||||| |||| ||| |||||||| | ||| |||||| ||| |||||||| ||| | |||||||||| ||||||||||||||    
T  31536006 tcttttttacatttcttaagaaaagttgttagtgtaattaatatatctattttatttgttaatattatcaaattatcttttgtttatatgtgtattaaat 31536105  T
Q  236 ttaacttttcat 247  Q
    || |||||||||    
T  31536106 ttgacttttcat 31536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 4250774 - 4250704
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  4250774 attgtcttttttacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 4250704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 3729385 - 3729486
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||||||||  || |||||||||||||| |||| ||||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  3729385 ttttttacatttcttaagaaaaattgttggtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgtttgtatgtgtattaaattt 3729484  T
Q  238 aa 239  Q
    ||    
T  3729485 aa 3729486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 30466078 - 30465969
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||||| |||| ||||| || |||||||| ||| |||||| ||||| |||||||  ||| | |||||||||||||||||||||||||||    
T  30466078 ttttttacatttcttaacaaaagttgtcggtgtaattaatatgtttgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaattt 30465979  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  30465978 gacttttcat 30465969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 5084663 - 5084555
Alignment:
Q  126 gcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaat----gtgtctgttttatgtgtcaatattataaaactgtcttttgtttg 221  Q
    ||||| |||||| ||||||||||||||||||||| |||| ||| ||||||||    |||| |||||| ||||| |||||||| ||| |||| ||||||||    
T  5084663 gcatctattgtccttttcacatttcttaagaaaagttgttagtgtaattaataaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttg 5084564  T
Q  222 tatgtgtat 230  Q
    |||||||||    
T  5084563 tatgtgtat 5084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 31153067 - 31152989
Alignment:
Q  169 ataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||| |||||| |||||||||||  ||| |||  |||||||||||||||||||||||| |||||||||    
T  31153067 ataattaatgtgtctattttatatgtcaatattactaaattgttatttgtttgtatgtgtattaaatttgacttttcat 31152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 9428163 - 9428272
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||| ||||||||||||| |||  | |||||||||||| ||| |||| ||||| |||||||| ||| | || ||||||||||||| |||| |||||    
T  9428163 tttttcacgtttcttaagaaaagttgctactataattaatgtatctattttgtgtgttaatattatcaaattatcatttgtttgtatgtatattgaattt 9428262  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  9428263 tacttttcat 9428272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 28238422 - 28238318
Alignment:
Q  140 tttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaa 239  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||| |||||||  | | | ||  |||||| ||||| |||||||||| |    
T  28238422 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttga 28238323  T
Q  240 ctttt 244  Q
    |||||    
T  28238322 ctttt 28238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 10669389 - 10669275
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||| |||||| || | ||||||||| |||  ||||||||||||| |||| ||||| |||||||  ||| |||  |||| |||||| |||||||    
T  10669389 ttgttttttttacatttttttaaaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgattgtatctgtatta 10669290  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  10669289 aatttgacttttcat 10669275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 33607384 - 33607460
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||| |||  ||||| |||||||| ||| | || ||||||||||||||| |||||||| |||||||||    
T  33607384 aattaatgtgtctatttagtgtgttaatattatcaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 33607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 3888051 - 3887954
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||| |||| | |  | ||||||||||| |||| ||||| |||||||  ||| |||||| |||||  |||||||||||||||    
T  3888051 ttttcacatttcttaagaaaagttgttattgcagttaatgtgtctattttgtgtgttaatatta-caaattgtcttatgtttacatgtgtattaaattt 3887954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 244
Target Start/End: Original strand, 31780089 - 31780226
Alignment:
Q  107 tctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaa 206  Q
    ||||||||||   ||||| ||| || |||| ||||||| ||||||||| |||| |||  | |  ||||||||||||| |||| | |||  ||||||  ||    
T  31780089 tctccgtccctatatgtaagcaccatttgtatttttcatatttcttaataaaagttgataatgcaattaatgtgtctattttgtatgttgatattactaa 31780188  T
Q  207 actgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    | |||| ||||||||| |||||||||||||| ||||||    
T  31780189 attgtcctttgtttgtttgtgtattaaatttcactttt 31780226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 16186567 - 16186675
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||||||||||  |||||||| || | ||| ||||||||||||||||||| | ||| ||| |||  ||| ||||  |||||||||  ||||||||||    
T  16186567 tctttttcacattttgtaagaaaagttattagtgtaattaatgtgtctgttttgtatgttaat-ttacgaaattgtcccttgtttgta--tgtattaaat 16186663  T
Q  236 ttaacttttcat 247  Q
    || |||||||||    
T  16186664 ttgacttttcat 16186675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 30248563 - 30248645
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtat 224  Q
    ||||||||||||||||||| |||| ||| || ||||||||| |||||| ||||| |||||||  ||| || | |||||||||||    
T  30248563 ttcacatttcttaagaaaagttgtaagtgta-ttaatgtgtttgttttgtgtgttaatattaccaaattggcatttgtttgtat 30248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 3308019 - 3307965
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgt 192  Q
    ||||||||||||||||||||| |||||| ||  | |||||||||||| |||||||    
T  3308019 tttttcacatttcttaagaaatattgtctgtgcagttaatgtgtctgatttatgt 3307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 3729489 - 3729523
Alignment:
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttt 243  Q
    |||| ||||||||||||||||||||||||||||||    
T  3729489 tgtcatttgtttgtatgtgtattaaatttaacttt 3729523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 12503652 - 12503614
Alignment:
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  12503652 tgtcttttgtttgtatgtgtagtaaatttgacttttcat 12503614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 31487103 - 31487065
Alignment:
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  31487103 tgtcttttgtttgtatgtgtattaagtttgacttttcat 31487065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 20522976 - 20523077
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttc 245  Q
    |||||||||||||  |||| |||  |||||||| || |  ||| |||||||||||||  ||| | | | ||||||||||||||||||||||| | |||||    
T  20522976 atttcttaagaaatgttgttagtgcaattaatgagtttagtttgtgtgtcaatattaccaaattatttcttgtttgtatgtgtattaaatttgatttttc 20523075  T
Q  246 at 247  Q
    ||    
T  20523076 at 20523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 34329987 - 34330107
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| ||||||||||||||||||||||| |||| |||| ||||||||||||||  ||||||| ||||| ||||||| |||| |||| |||||||||||||    
T  34329987 catccattgtctttttcacatttcttaaaaaaagttgttagtataattaatgtacctgttttgtgtgttaatattacaaaattgtcctttgtttgtatgt 34330086  T
Q  227 gtattaaatttaacttttcat 247  Q
    |||||||||||||||||||||    
T  34330087 gtattaaatttaacttttcat 34330107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 41665706 - 41665815
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||| |||| ||| ||| |||| ||||||||||||||||||||||||    
T  41665706 tttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatagtatcaaattgtcctttgtttgtatgtgtattaaattt 41665805  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  41665806 aacttttcat 41665815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 45214721 - 45214830
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||| | ||| || | ||||||||||||||||||||||||    
T  45214721 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattttcaaattgccctttgtttgtatgtgtattaaattt 45214820  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  45214821 aacttttcat 45214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 15851516 - 15851636
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||| |||||||| ||| |||| ||||||| |||||    
T  15851516 catctattgtctttttcacatttcttaagaaaagttgtgagtgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcctttgtttatatgt 15851615  T
Q  227 gtattaaatttaacttttcat 247  Q
    ||||||||||| | |||||||    
T  15851616 gtattaaatttgaattttcat 15851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 17251076 - 17250961
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||||||    
T  17251076 attgtctttttcacattttttaagaaaagttgttagtataattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtatt 17250977  T
Q  232 aaatttaacttttcat 247  Q
     || || |||||||||    
T  17250976 taaattgacttttcat 17250961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 31644569 - 31644442
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| ||||||||||||||||||  |||||||| || ||||| ||||||||||||||||||| ||||| ||||||| |||| |||| ||||||    
T  31644569 atgtaggcatccattgtctttttcacattttataagaaaagttatcagtttaattaatgtgtctgttttttgtgttaatattacaaaattgtcatttgtt 31644470  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||| | |||||||    
T  31644469 tgtatgtgtattaaatttgatttttcat 31644442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 27297573 - 27297682
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||| ||||||| |||| | || ||||||||||||||||||||||||    
T  27297573 tttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaattt 27297672  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  27297673 gacttttcat 27297682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 1246528 - 1246416
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| |||||| ||||| |||||||| ||| |||  ||||||||||||||||||    
T  1246528 attgtctttttcacatttcttaaaaaaagttgtcagtataattaacgtgtttgttttgtgtgttaatattatgaaattgttctttgtttgtatgtgtatt 1246429  T
Q  232 aaatttaactttt 244  Q
    |||||| ||||||    
T  1246428 aaatttgactttt 1246416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 26512067 - 26512173
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| | |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  26512067 tttttcacatttcttaaaaaaaattgttagtataattaatgtgtttattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 26512166  T
Q  238 aactttt 244  Q
     ||||||    
T  26512167 gactttt 26512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 37355031 - 37355141
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||||||| ||||  || |||||||||||||| |||| ||||| ||||||| |||| |||| |||||||||||||||||||||||    
T  37355031 ctttttcacatttcttaagaaaagttgtttgtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatt 37355130  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  37355131 tgacttttcat 37355141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 44424591 - 44424700
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||| | ||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  44424591 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaattt 44424690  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  44424691 gacttttcat 44424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 44421445 - 44421544
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  44421445 tttttcacatttcttaagaaaaattgtcagtgtaattaatgtatctgttttgtttgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 44421544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 17663620 - 17663726
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||| || |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  17663620 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgcctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 17663719  T
Q  238 aactttt 244  Q
     ||||||    
T  17663720 gactttt 17663726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 35178908 - 35178793
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||| |||||||||||||||||||||| |||||||| || ||||||||| |||||| ||||  |||||||  ||| |||||||| ||||||| ||||||    
T  35178908 attgtttttttcacatttcttaagaaaagttgtcagtgtagttaatgtgtatgttttgtgtgataatattacgaaattgtcttttatttgtatttgtatt 35178809  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  35178808 aaatttgacttttcat 35178793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 20361979 - 20362084
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||| |||||||  ||| |||| |||||||||||||||| |||||||    
T  20361979 tttttcacatttcttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgta-taaattt 20362077  T
Q  238 aactttt 244  Q
     ||||||    
T  20362078 gactttt 20362084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 28733794 - 28733925
Alignment:
Q  111 cgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactg 210  Q
    |||||| | ||||| ||| | ||| |||||||||||||| ||||||||||||||| || ||||||||||||||||||||  ||| |||||||  ||| ||    
T  28733794 cgtcccttaatgtaggcacccattttctttttcacattttttaagaaaaattgtcggtgtaattaatgtgtctgtttta--tgttaatattaccaaattg 28733891  T
Q  211 tcttttgtttgtatgtgtattaaatttaactttt 244  Q
    || ||||||||||||||||| |||||| ||||||    
T  28733892 tcatttgtttgtatgtgtataaaatttgactttt 28733925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 247656 - 247765
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||| ||| |||| ||| |||||||||||||| |||| ||||| |||||||||||| || | ||||||||||||| ||||||||||    
T  247656 tttttcacattttttaaggaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattataaaattgccctttgtttgtatgtatattaaattt 247755  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  247756 gacttttcat 247765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 9718311 - 9718182
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | |||||  |||| ||||  |||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||| |||||||  |||    
T  9718311 ctccgtcccttaatgtagccatccattgcatttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaa 9718212  T
Q  208 ctgtcttttgtttgtatgtgtattaaattt 237  Q
     | |  ||||||||||||||||||||||||    
T  9718211 ttattctttgtttgtatgtgtattaaattt 9718182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 24774861 - 24774970
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| || | ||| |||||||||| ||| |||| ||||| |||||||  ||| |||||||||||||||||||||||||||||    
T  24774861 tttttcacattttttaagaaaatttattagtgtaattaatgtatctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaattt 24774960  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  24774961 gacttttcat 24774970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 28265060 - 28264951
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||| || || |||||||  ||| |||| ||||||||||||| ||||||||||    
T  28265060 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcatttgtttgtatgtatattaaattt 28264961  T
Q  238 aacttttcat 247  Q
     ||| |||||    
T  28264960 gactattcat 28264951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 3326714 - 3326829
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| |||||||| |||| |||| |||||||||| || ||||||||||||||||||| | | | |||||||| ||| |||| ||||||| |||||||||     
T  3326714 attgcctttttcatattttttaaaaaaaattgtcggtgtaattaatgtgtctgttttgtatattaatattattaaattgtcctttgtttatatgtgtata 3326813  T
Q  232 aaatttaacttttcat 247  Q
    ||||||||||||||||    
T  3326814 aaatttaacttttcat 3326829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 43650030 - 43650129
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | ||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  43650030 ttttttacatttctttagaaaaattgtcagtgtaattaatgtgtctgttttgtatgttaatattactaaattgttctttgtttgtatgtgtattaaattt 43650129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 2917206 - 2917104
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||| |||| | |||    ||||  ||| |||||||||||||||||||||||||||||    
T  2917206 ttttccacatttcttaagaaaagttgttagtataattaatgtgtctattttgtatgt----attaataaattgtcttttgtttgtatgtgtattaaattt 2917111  T
Q  238 aactttt 244  Q
    |||||||    
T  2917110 aactttt 2917104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 7278727 - 7278623
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| ||| |||||| ||||   ||||||| ||| || | |||||||||||||||||||    
T  7278727 ttgtttttttcacatttgttaagaaaaattgtcagtgtaattaatatgtttgttttgtgtgaatatattatcaaattgccctttgtttgtatgtgtatta 7278628  T
Q  233 aattt 237  Q
    |||||    
T  7278627 aattt 7278623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 8065180 - 8065072
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||||||| ||||| |||||||  ||| | || |||||||||||||||||||| |||     
T  8065180 ttttcacatttcctaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaactttg 8065081  T
Q  239 acttttcat 247  Q
    | |||||||    
T  8065080 atttttcat 8065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 11459149 - 11459257
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||| ||||| ||||| || ||| ||||||||||||||| ||||| |||||||  ||| |||| ||||||||||| ||||||||||||    
T  11459149 tttttcacatttcttatgaaaagttgtcggtgtaaataatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatatgtattaaattt 11459248  T
Q  238 aacttttca 246  Q
     | ||||||    
T  11459249 gatttttca 11459257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 36174902 - 36174795
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||| |||||||||||||||||| |||  || |||| ||||| ||| |||||| | |||||| ||| |||||||| |||||||||||||||||||    
T  36174902 ctttttcacgtttcttaagaaaaattgttagtgcaaataatatgtctatttcatgtgtgagtattattaaattgtcttttatttgtatgtgtattaaatt 36174803  T
Q  237 taactttt 244  Q
    | ||||||    
T  36174802 tgactttt 36174795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 44274776 - 44274685
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgta 229  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||| ||||||   ||| |||| ||||||||||||||||    
T  44274776 tttttcacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcatttgtttgtatgtgta 44274685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 3237715 - 3237828
Alignment:
Q  136 tctttttcacatttcttaagaaaaat--tgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaa 233  Q
    |||||||||||||| ||||||||| |  | | | | ||||||||||||||||||| ||||| ||||||| |||| | || ||||||||||||||||||||    
T  3237715 tctttttcacattttttaagaaaagtgttattaatgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaa 3237814  T
Q  234 atttaacttttcat 247  Q
    |||| |||||||||    
T  3237815 atttgacttttcat 3237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 2521374 - 2521303
Alignment:
Q  173 ttaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||||||||| |||||||||  |||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  2521374 ttaatgtgtctattttatgtggtaatattattaaattgtcttttgtttgtatgtgtattaaatttgactttt 2521303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 14420682 - 14420780
Alignment:
Q  147 tttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttca 246  Q
    ||||| ||||||| |||| ||| ||||||||||||||||||| ||||| |||||||  ||| |||| |||||||| ||||||||| ||||||||||||||    
T  14420682 tttctaaagaaaagttgttagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgcatgtgtatt-aatttaacttttca 14420780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 40346195 - 40346081
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| ||||||||| ||||  ||  |||||||||||   |||| ||||| |||||||  ||| |||||||| |||||||||||||||    
T  40346195 ttgtttttttcacattttttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactaaattgtcttttatttgtatgtgtatta 40346096  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  40346095 aatttgacttttcat 40346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 2131753 - 2131862
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||| |||| |||  ||||||  ||||| |||| ||||| |||||||  ||| | |||||||||||||| ||||||||||||    
T  2131753 ttttttacatttcttaagaaaagttgttagtgcaattaacatgtctattttgtgtgttaatattaccaaattatcttttgtttgtatctgtattaaattt 2131852  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  2131853 gacttttcat 2131862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 3645319 - 3645428
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||| ||| | |||||||  ||| |||| || |||||| ||| ||||||||||    
T  3645319 tttttcacatttcttaagaaaagttgttagtttacttaatgtgtctattttgtgtattaatattactaaattgtccttcgtttgtgtgtatattaaattt 3645418  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  3645419 gacttttcat 3645428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 11071676 - 11071773
Alignment:
Q  150 cttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||| |||| |||  |||||||||||||  ||||||||| |||||||  ||| |||| |||| ||||||||||||||||||| |||||||||    
T  11071676 cttaagaaaagttgttagtgcaattaatgtgtctaatttatgtgttaatattactaaattgtcctttgcttgtatgtgtattaaatttgacttttcat 11071773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 32677471 - 32677580
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||| |||||||||||||||||||||| | || ||||||||||||| ||||||| || |||||| | ||| |||| ||||||||||  |||| |||||||    
T  32677471 ttttccacatttcttaagaaaaattgttaatacaattaatgtgtctattttatgggttaatattttcaaattgtcatttgtttgtacatgtactaaattt 32677570  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  32677571 gatttttcat 32677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 6275677 - 6275574
Alignment:
Q  138 tttttcacatttcttaagaaaaa-ttgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||| |||||||||| ||||| |||| |||  ||||||||||||| |||| ||||| || ||||| ||| |||||||||||||||| |||||||||||    
T  6275677 tttttcccatttcttaaaaaaaaattgttagtgcaattaatgtgtctattttgtgtgttaa-attatgaaattgtcttttgtttgtatatgtattaaatt 6275579  T
Q  237 taact 241  Q
    |||||    
T  6275578 taact 6275574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 35241823 - 35241711
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| |||||| ||||||| |||||||  ||||| || ||||||||||||||||||| | ||| |||||||| ||| | || |||||||||||| ||| |    
T  35241823 attgccttttttacatttcataagaaatgttgtctgtgtaattaatgtgtctgttttgtttgttaatattatcaaattatcatttgtttgtatgcgtaat 35241724  T
Q  232 aaatttaactttt 244  Q
    |||||| ||||||    
T  35241723 aaatttgactttt 35241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 4033585 - 4033676
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||| || | ||| |||||||||| |||||||| ||||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  4033585 atttcttaagaaaagttattagtgtaattaatgtttctgttttctgtgttaatattactaaattgttctttgtttgtatgtgtattaaattt 4033676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 23464705 - 23464788
Alignment:
Q  164 tcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||||| |||| || || |||||||| ||| |||| ||| ||||||| |||||||||||| |||||||||    
T  23464705 tcagtataattaatgtgtctattttgtgcgtaaatattatcaaattgtcctttatttgtatatgtattaaatttgacttttcat 23464788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 38449823 - 38449724
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| |||| || |   | ||||||||||||||||||| ||| | |||||||| ||| | || ||||||||||||||||||||||||    
T  38449823 tttttcacatttcttaataaaagttatttttgtaattaatgtgtctgttttgtgtattaatattatcaaattatcatttgtttgtatgtgtattaaattt 38449724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 21012849 - 21012955
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| |||| |||  ||||||||||| | |||| ||||| |||||||| ||| | || ||||||||||||  ||||||||||    
T  21012849 tttttcaaatttcttaagaaaagttgttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattatcctttgtttgtatgcatattaaattt 21012948  T
Q  238 aactttt 244  Q
     ||||||    
T  21012949 gactttt 21012955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 41865712 - 41865817
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||||  || |||||||||||||| |||| ||||| || ||||  ||| | ||  |||||||||||||||||||||||    
T  41865712 tttttcacatttcttaagaaaagttgttggtctaattaatgtgtctattttgtgtgttaacattaccaaattatc-cttgtttgtatgtgtattaaattt 41865810  T
Q  238 aactttt 244  Q
     ||||||    
T  41865811 gactttt 41865817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 45150842 - 45150736
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||||||||||||||||| ||||  ||  |||||||||||   |||| ||||| |||||||   || |||| |||||||||||||||||||||||| ||    
T  45150842 ttcacatttcttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactcaattgtcctttgtttgtatgtgtattaaatttgac 45150743  T
Q  241 ttttcat 247  Q
    |||||||    
T  45150742 ttttcat 45150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 375422 - 375345
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||| ||||| | |||||| ||| |||| |||||||||||||||||||||||| | |||||||    
T  375422 taattaatgtgtctattttgtgtgttagtattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 375345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 4398632 - 4398545
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||||||||||| ||||||||| |||| ||| |||||||||||||| |||| ||||| |||||||  ||| |||| |||||||||||||    
T  4398632 tttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcatttgtttgtatgt 4398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 25731282 - 25731186
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||| || || ||||||||||| ||| || ||| ||||| |||||||| ||| | |||||||||||||||| |||||||||| | |||||||    
T  25731282 ttaagaaaagttatcggtataattaatatgtttggtttgtgtgttaatattatcaaattatcttttgtttgtatgtatattaaatttgatttttcat 25731186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 27749508 - 27749572
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||||| ||| | |||||||    
T  27749508 tttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtattaatatta 27749572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 4758052 - 4758127
Alignment:
Q  168 tataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttt 243  Q
    |||||||||||||| | |||| ||||| |||||||| ||| |||| ||||||| |||||||||||||||| |||||    
T  4758052 tataattaatgtgtttattttgtgtgttaatattatgaaattgtcctttgtttttatgtgtattaaatttgacttt 4758127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 38982146 - 38982071
Alignment:
Q  172 attaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||| |||||||| ||||| |||||||  ||| | | ||||||||||||||||||||||||| |||||||||    
T  38982146 attaatgtatctgttttgtgtgttaatattaccaaattattttttgtttgtatgtgtattaaatttgacttttcat 38982071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 43709914 - 43710021
Alignment:
Q  138 tttttcacatttcttaag-aaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||||||||| ||||||||| |||  |||||||| |||| |||| ||||| |||||||   || |||| ||||||| ||||||||||||| |    
T  43709914 tttttcacatttcttaagcaaaaattgttagtgcaattaatgcgtctattttgtgtgttaatattacttaattgtcctttgtttatatgtgtattaaaat 43710013  T
Q  237 taactttt 244  Q
    | ||||||    
T  43710014 ttactttt 43710021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 13477142 - 13477033
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||||| |||  ||||||| ||| | |||||||||| |||||||  | | |||| ||| ||||||||  ||||||||||    
T  13477142 tttttcacattttttaagaaaaattgttagtgcaattaatatgtttattttatgtgttaatattactagattgtcctttatttgtatgcatattaaattt 13477043  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  13477042 gatttttcat 13477033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 28190594 - 28190703
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||||   ||| |||| |||||||||||| ||| | |||| ||||| |||||||  ||| |||| ||||||||||| |||||||| |||    
T  28190594 tttttgacatttcttagagaaagttgttagtataattaatatgtttattttttgtgttaatattaccaaattgtcatttgtttgtatatgtattaagttt 28190693  T
Q  238 aacttttcat 247  Q
    || |||||||    
T  28190694 aatttttcat 28190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 7258049 - 7257941
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||||| |||| |||||||||||| | | | |||||||||||| |||||  ||| | |||||||| ||| |||| || ||||||| |||||| ||||    
T  7258049 tctttttcatattttttaagaaaaattattaatgtaattaatgtgtttgtttagtgtattaatattattaaattgtcattcgtttgtacgtgtataaaat 7257950  T
Q  236 ttaactttt 244  Q
    || ||||||    
T  7257949 ttgactttt 7257941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 13534411 - 13534471
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaata 199  Q
    ||||||||||||||||||||  |||||||| |||||||||||| |||||| ||||| ||||    
T  13534411 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtttgttttgtgtgttaata 13534471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 8667634 - 8667725
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgt-gtcaatattataaaactgtcttttgtttgtatgtgt 228  Q
    ||||||||||||| |||||||| |||||||| |||||||| |||||||||| | |  | |||||||| ||| | || |||||||||||||||    
T  8667634 tttttcacatttcctaagaaaagttgtcagtctaattaatatgtctgttttgtatctttaatattatcaaattctcctttgtttgtatgtgt 8667725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 7255629 - 7255706
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||||||| ||| | |||||||  ||| | || |||| |||| |||||||||||||| |||||||||    
T  7255629 taattaatgtgtctgttttgtgtattaatattaccaaattatcctttgattgtttgtgtattaaatttgacttttcat 7255706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 14527620 - 14527728
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||  |||| ||||||||| ||  |||||||||||||| |||| ||||| |||||||   || | || ||||||||||||| ||||||||||    
T  14527620 tttttcacattatttaa-aaaaattgttagggtaattaatgtgtctattttgtgtgttaatattaccgaattatcatttgtttgtatgtatattaaattt 14527718  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  14527719 gatttttcat 14527728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 16808899 - 16808823
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||| | |||||||| | |||||||  ||| |||| ||||||||||||| ||||||| |||| |||||||    
T  16808899 aattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcat 16808823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 16848180 - 16848104
Alignment:
Q  171 aattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||| | |||||||| | |||||||  ||| |||| ||||||||||||| ||||||| |||| |||||||    
T  16848180 aattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcat 16848104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 42250985 - 42250882
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||| ||||| |||  ||| |||||||||||||| |||| ||| | ||| ||   ||| |||| ||| ||| ||||||||||||||||    
T  42250985 tttttcacatttcttatgaaaagttggtagtgtaattaatgtgtctattttgtgttttaatgtt---aaattgtcatttatttatatgtgtattaaattt 42250889  T
Q  238 aactttt 244  Q
     ||||||    
T  42250888 gactttt 42250882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 2395798 - 2395848
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgtttt 188  Q
    ||||| |||||||||||||||| |||| ||| |||||||||||||| ||||    
T  2395798 ttttttacatttcttaagaaaagttgttagtgtaattaatgtgtctatttt 2395848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 30401582 - 30401548
Alignment:
Q  213 ttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||||||||||||||| |||||||    
T  30401582 ttttgtttgtatgtgtattaaatttaatttttcat 30401548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 35453810 - 35453735
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||||| ||| |||||||  ||| |||  ||||||| |||||  |||||||||||||||||||    
T  35453810 taattaatgtgtctattttatatgttaatattactaaattgttctttgtttttatgt--attaaatttaacttttcat 35453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 8384082 - 8384017
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    |||||||| |||||||||||||||| || |||  ||||||||||| | |||| ||||| |||||||    
T  8384082 ctttttcatatttcttaagaaaaatagttagtgcaattaatgtgtttattttgtgtgttaatatta 8384017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 1604409 - 1604317
Alignment:
Q  152 taagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    |||||||||||| |||| || ||||| |||||  ||||||||| ||| |||| ||  |||| |||||||||| | ||||| ||||| ||||||    
T  1604409 taagaaaaattggcagtgtagttaatatgtctaatttatgtgtgaattttattaatttgtcctttgtttgtacgcgtatttaatttgactttt 1604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 8393239 - 8393303
Alignment:
Q  173 ttaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||| |||||| ||||| |||||||| ||| | |  ||||||||||||||| ||||||||    
T  8393239 ttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaattt 8393303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 36846786 - 36846850
Alignment:
Q  173 ttaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||| |||||| ||||| |||||||| ||| | |  ||||||||||||||| ||||||||    
T  36846786 ttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaattt 36846850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 44462655 - 44462591
Alignment:
Q  173 ttaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||| |||||| ||||| |||||||| ||| | |  ||||||||||||||| ||||||||    
T  44462655 ttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaattt 44462591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 25017788 - 25017673
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||||    
T  25017788 attgtctttttcacgtttcttaagaaatgttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtatt 25017689  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  25017688 aaatttgacttttcat 25017673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 36177270 - 36177397
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| ||||||||||| |||||||||||||||| || ||||| |||||||||||||| |||| ||||| ||||||| |||| |||| ||||||    
T  36177270 atgtaggcatctattgtcttttttacatttcttaagaaaagttatcagtgtaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtt 36177369  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||| |||||||||    
T  36177370 tgtatgtgtattaaatttgacttttcat 36177397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 3559135 - 3559026
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  3559135 tttttcacatttcttaagaaaaattgttggtataattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaattt 3559036  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  3559035 gacttttcat 3559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 27587834 - 27587942
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||  ||| |||| ||||| ||||||||||||||||||    
T  27587834 tttttcacatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtatgtatgtgtattaaattt 27587933  T
Q  238 aacttttca 246  Q
     | ||||||    
T  27587934 gatttttca 27587942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 27798122 - 27798261
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||| | ||||| ||||| |||||||||||| |||||||| ||||||||| |||||||| |||||||||| ||||| |||||||| |||    
T  27798122 ctccgtcccttaatgcaggcatccattgtatttttcacattttttaagaaatattgtcagtgtaattaatttgtctgttttgtgtgttaatattatcaaa 27798221  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     | || |||||||||||||||||||| ||| |||||||||    
T  27798222 ttatcatttgtttgtatgtgtattaagtttgacttttcat 27798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 15898570 - 15898472
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  15898570 ttttcacttttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaattt 15898472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 4738614 - 4738735
Alignment:
Q  126 gcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatg 225  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| | |||||| ||||| |||||||  ||| || | ||||||| ||||    
T  4738614 gcatccattgtctttttcacatttcttaagaaatattgtcagtgtaattaatgtatttgttttgtgtgttaatattactaaattgacctttgtttttatg 4738713  T
Q  226 tgtattaaatttaacttttcat 247  Q
    |||||||||||| |||||||||    
T  4738714 tgtattaaatttgacttttcat 4738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 3247388 - 3247273
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||||||||||||||||||| ||| |||| |||||||| |||||||||| | ||| |||||||  ||| |||| ||||||||||||||||||    
T  3247388 attgcctttttcacatttcttaagaaaagttgacagtgtaattaatatgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtatt 3247289  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  3247288 aaatttgacttttcat 3247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 3631256 - 3631119
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||| ||||| |||||||   ||    
T  3631256 ctccgtcccttaatgtaggcatccattgtctttttcacatttcttaa-aaaaattgtc-gtgtaattaatgtgtcggttttgtgtgttaatattacgcaa 3631159  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     || | |||||||||||||||||||||||| |||||||||    
T  3631158 ttgacctttgtttgtatgtgtattaaatttgacttttcat 3631119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 5845142 - 5845281
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||| | ||||||| ||||| |||| |||||||| ||||||||||||   |||||||| |||||||||| | |||||| ||| | |||||||| |||    
T  5845142 ctccgtctcttgatgtaggcatccattgcctttttcatatttcttaagaattgttgtcagtgtaattaatgtatttgttttgtgtattaatattatcaaa 5845241  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| |||||||||||||||||||||||| |||||||||    
T  5845242 ttgtcatttgtttgtatgtgtattaaatttgacttttcat 5845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 21912116 - 21912222
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||| ||| || ||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||||||||| |||    
T  21912116 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattattaaattgtcttttgtttgtatgtgtattaagttt 21912215  T
Q  238 aactttt 244  Q
     ||||||    
T  21912216 gactttt 21912222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 39690594 - 39690488
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  39690594 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattt 39690495  T
Q  238 aactttt 244  Q
     ||||||    
T  39690494 gactttt 39690488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 35569113 - 35569004
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||||||| | |||||||  ||| | |  ||||||||||||||||||||||||    
T  35569113 tttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtattaatattactaaattattctttgtttgtatgtgtattaaattt 35569014  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  35569013 gacttttcat 35569004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 34877656 - 34877771
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||||||||||||||||||  |||||||| |||||||| |||||||||| ||||| |||||||  ||| | || ||||||||| ||||||||    
T  34877656 attgcctttttcacatttcttaagaaatgttgtcagtgtaattaatttgtctgttttgtgtgttaatattaccaaattatcatttgtttgtgtgtgtatt 34877755  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  34877756 aaatttgacttttcat 34877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 27642498 - 27642604
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| |||||||  ||| | || ||||||||||||||||||||||||    
T  27642498 tttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaattt 27642597  T
Q  238 aactttt 244  Q
     ||||||    
T  27642598 gactttt 27642604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 43453986 - 43454086
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttc 245  Q
    ||||||||| |||| |||| ||||||||||||||||| ||||| | ||| |||||||| ||||| ||||||||||||||||||||||||||| | |||||    
T  43453986 atttcttaaaaaaagttgttagtataattaatgtgtcagttttgtatgttaatattatcaaactatcttttgtttgtatgtgtattaaatttgatttttc 43454085  T
Q  246 a 246  Q
    |    
T  43454086 a 43454086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 20946065 - 20946192
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| ||||  ||||||| |||||||||||||  |||| |||  |||||| |||||| |||| ||||| |||||||| ||| |||| ||||||    
T  20946065 atgtaagcatccattgcatttttcatatttcttaagaaacgttgttagtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcatttgtt 20946164  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||| |||||||||    
T  20946165 tgtatgtgtattaaatttgacttttcat 20946192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 29866185 - 29866294
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| |||  ||||||| ||||| |||| ||||| |||||||  ||  |||| ||||||||||||||||||||||||    
T  29866185 tttttcacatttcttaagaaaagttgttagtgcaattaatatgtcttttttgtgtgttaatattaccaagttgtcctttgtttgtatgtgtattaaattt 29866284  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  29866285 gacttttcat 29866294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 4857606 - 4857493
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagt----ataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaa 233  Q
    ||||||||||||||||| |||| |||| |||     |||||||||||||| |||||||||| |||||||  ||| |||| ||||||||||||||||||||    
T  4857606 tttttcacatttcttaataaaagttgttagtgtaattaattaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaa 4857507  T
Q  234 atttaacttttcat 247  Q
    |||| |||||||||    
T  4857506 atttgacttttcat 4857493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 36347709 - 36347601
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| ||||||||| |||| |||||||| |||||||||| |||||||| ||| | |||||||| ||| ||  |||||||||||||||||||||||||    
T  36347709 tttttcagatttcttaataaaagttgtcagtgtaattaatgtatctgttttgtgtattaatattatcaaattgatttttgtttgtatgtgtattaaattt 36347610  T
Q  238 aacttttca 246  Q
     ||| ||||    
T  36347609 gactattca 36347601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 41521185 - 41521293
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||| |||||| |||||||||||||| |||  ||||||| ||||| |||| ||||| |||||||| ||| |||| ||||||| ||||||||||||||||     
T  41521185 tttttacattttttaagaaaaattgttagtgaaattaatatgtctattttgtgtgttaatattattaaattgtcatttgtttatatgtgtattaaatttg 41521284  T
Q  239 acttttcat 247  Q
    |||||||||    
T  41521285 acttttcat 41521293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 10523382 - 10523283
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||| ||||||||| || ||||| ||||||||||||||||||| ||||| |||||||  ||| ||| |||||||| ||||||||||||||||    
T  10523382 tttttcatattttttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgttttttgtttttatgtgtattaaattt 10523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 10933996 - 10934111
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| ||||||||||||| || |||||  |||||||| ||||||||||||||||||| | ||| |||||||  ||| | |  ||||||||||||||||||    
T  10933996 attgcctttttcacattttttcagaaatgttgtcagtgtaattaatgtgtctgttttgtatgttaatattaccaaattattctttgtttgtatgtgtatt 10934095  T
Q  232 aaatttaacttttcat 247  Q
    |||||| |||||||||    
T  10934096 aaatttgacttttcat 10934111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 40979338 - 40979211
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| ||||||||||||| ||||||||| |||| ||||||   |||||||  ||| |||||| ||| | |||||||  ||| |||| ||||||    
T  40979338 atgtaggcatccattgtctttttcatatttcttaataaaagttgtcaaggtaattaacatgtatgttttgtgtattaatattacgaaattgtcctttgtt 40979239  T
Q  220 tgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||||||| |||||||||    
T  40979238 tgtatgtgtattaaatttgacttttcat 40979211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 31642581 - 31642484
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| |||| ||||||| |||| ||||||||||||| |||||||||||||| |||| ||||| |||||||  |||||||||||||||| ||||||||||    
T  31642581 ttgtattttacacatttattaaaaaaaattgtcagtgtaattaatgtgtct-ttttgtgtgttaatattaccaaactgtcttttgtttatatgtgtatt 31642484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 38972234 - 38972129
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||  ||||  ||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  38972234 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtct-atttaaatgttaatattaccaaattgtcctttgtttgtatgtgtattaaattt 38972136  T
Q  238 aactttt 244  Q
     ||||||    
T  38972135 gactttt 38972129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 43060623 - 43060513
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| |||| |||| |||| ||| |||||||||||||| |||| ||||| |||||||  | | | ||||||||||||||||||||||    
T  43060623 ttgtttttttcacattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccatattatcttttgtttgtatgtgtatta 43060524  T
Q  233 aatttaacttt 243  Q
    ||||| |||||    
T  43060523 aatttgacttt 43060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 9946472 - 9946368
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||||||||| |||| |||| |||||  |||||||||||||||||||||| || | |||||||  ||| | || |||||||||| |||||||    
T  9946472 attgtctttttcacattttttaataaaagttgtcgatataattaatgtgtctgttttacgtattaatattacgaaattatcctttgtttgtacgtgtatt 9946373  T
Q  232 aaatt 236  Q
    |||||    
T  9946372 aaatt 9946368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 16969369 - 16969469
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||  ||| | ||| |||||||| |||||||  ||| ||||||||||| |||||||    
T  16969369 ctttttcacattttttaacaaaaattgttagtataattaatgtgtctaatttgtttgttaatattatcaaactgttatttatttgtatgtgtgttaaatt 16969468  T
Q  237 t 237  Q
    |    
T  16969469 t 16969469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 18729584 - 18729697
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtc----ttttgtttgtatgtgtattaa 233  Q
    ||||||||||||||||||||||||| |  || |||||||||||||| |||| ||||| |||||||| ||| | ||     ||||||||||||||||||||    
T  18729584 tttttcacatttcttaagaaaaattatttgtgtaattaatgtgtctattttgtgtgttaatattattaaagtatcatttgtttgtttgtatgtgtattaa 18729683  T
Q  234 atttaacttttcat 247  Q
    |||| |||||||||    
T  18729684 atttgacttttcat 18729697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 12895324 - 12895218
Alignment:
Q  133 ttgtctttttcacatttcttaa--gaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtat 230  Q
    |||| |||||||||||| ||||  || || ||||| || ||||||||||||||||||| ||| | |||||||  ||| ||||||||||||||||||||||    
T  12895324 ttgtttttttcacattttttaaaagagaagttgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaattgtcttttgtttgtatgtgtat 12895225  T
Q  231 taaattt 237  Q
    |||||||    
T  12895224 taaattt 12895218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 21575018 - 21574880
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||| | |||||||||||||||||||||||||||  || | ||| || ||||||||||| |||| | ||| |||||||  |||    
T  21575018 ctccgtcccttaatgtaggcacccattgtctttttcacatttcttaagaaatgtttttagtgtacttaatgtgtctattttgtatgttaatattaccaaa 21574919  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| |||||||||| |||||||||||||  ||||||||    
T  21574918 ttgtcctttgtttgta-gtgtattaaatttgtcttttcat 21574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 25690794 - 25690689
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatat--tataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    ||||||||||||||||||| ||||| || |||||||||||| |||||| ||||| |||||  |   ||| |||| ||||||||||||||||||||||| |    
T  25690794 ttcacatttcttaagaaaagttgtcggtgtaattaatgtgtatgttttgtgtgttaatatagttacaaattgtcctttgtttgtatgtgtattaaattca 25690695  T
Q  239 actttt 244  Q
    ||||||    
T  25690694 actttt 25690689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 30348185 - 30348076
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||| ||||||| |||| | | || ||||||||||| |||| ||||| |||||||  ||| | || ||||||||| ||||||||||||||    
T  30348185 tttttcacatttctgaagaaaagttgttaatttacttaatgtgtctattttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaattt 30348086  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  30348085 gacttttcat 30348076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 600769 - 600860
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||| |||| |||  ||||||||||||| || | ||||| |||||||| ||| |||| ||||||||||| ||||||||||||    
T  600769 atttcttaagaaaacttgttagtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcatttgtttgtatatgtattaaattt 600860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 16224 - 16115
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||| | | ||| |||| |||  ||||||||| ||| |||| ||||| |||||||  ||| |||| ||||||||||| |||||||||||    
T  16224 ctttttcacatttctaacggaaagttgttagtgcaattaatgtatctattttttgtgtgaatattactaaattgtcctttgtttgtatttgtattaaatt 16125  T
Q  237 taacttttca 246  Q
    | ||||||||    
T  16124 tgacttttca 16115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 33862924 - 33862873
Alignment:
Q  138 tttttcacatttctt-aagaaaaattgtcagtataattaatgtgtctgtttt 188  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  33862924 tttttcacatttctttaagaaaaattgtcagtgtaattaatgtgtctgtttt 33862873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 36750882 - 36750778
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||| ||||||| |||| |||| ||  ||| ||||||||  ||||| ||||| |||||||| | |||||| ||||||| ||||||||||||||||    
T  36750882 tttttcacaattcttaataaaagttgttagcgtaagtaatgtgt--gttttgtgtgttaatattattagactgtcctttgtttatatgtgtattaaattt 36750785  T
Q  238 aactttt 244  Q
     ||||||    
T  36750784 gactttt 36750778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 14044606 - 14044497
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| | |  | ||||| ||||| |||||||| | |||||||| ||| | || ||| ||| ||||||| ||||||||    
T  14044606 tttttcacatttcttaagaaaagttgttaatgcagttaatatgtctattttatgtattaatattatcaaattatcatttatttttatgtgtgttaaattt 14044507  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  14044506 gacttttcat 14044497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 15967220 - 15967156
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    |||||||||||||||||||||  ||||| || ||||||||||||||||||| ||| | |||||||    
T  15967220 tttttcacatttcttaagaaaggttgtcggtgtaattaatgtgtctgttttgtgtattaatatta 15967156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 4745122 - 4745229
Alignment:
Q  138 tttttcacatttctt-aagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||| || ||||||| | || |||  ||||||||||| | |||| || || |||||||  ||| |||| |||||||||||||||||||||||    
T  4745122 tttttcacatttttttaagaaaagtagttagtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcatttgtttgtatgtgtattaaatt 4745221  T
Q  237 taactttt 244  Q
    | ||||||    
T  4745222 tgactttt 4745229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 10656583 - 10656695
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||||||||||||||||||||||||| | |  ||||||||||  | |||||||||| || ||||  ||| | |||||| |||||||  || |||    
T  10656583 ttgtttttttcacatttcttaagaaaaattgttaatgcaattaatgtg--tattttatgtgttaaaattaccaaattatcttttttttgtattggtgtta 10656680  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  10656681 aatttgacttttcat 10656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 19281567 - 19281500
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||| |||||||| ||| | |||||||  ||| | |||||||||||||||||||||||||||    
T  19281567 taattaatgtatctgttttgtgtattaatattactaaattatcttttgtttgtatgtgtattaaattt 19281500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 11980711 - 11980821
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||| |||| |||| |||| |||| ||| |||||||||||||| |||| ||||| |||||||  | | | ||   ||||| |||||||||||||||    
T  11980711 ctttttcatattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattactatattatccactgtttatatgtgtattaaatt 11980810  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  11980811 tgacttttcat 11980821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 732026 - 731961
Alignment:
Q  173 ttaatgtgtctgttttatgtgtcaatattataaaactgt-cttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||| |||||| ||||| |||||||| ||| ||| ||||||||||||||||||||||||||    
T  732026 ttaatatgtttgttttgtgtgttaatattatcaaattgttcttttgtttgtatgtgtattaaattt 731961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 7510597 - 7510666
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    |||| |||||||||||| ||||||||| || | ||| |||||||||||| |||||| ||||| |||||||    
T  7510597 ttgtatttttcacattttttaagaaaagttattagtgtaattaatgtgtatgttttgtgtgttaatatta 7510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 20976398 - 20976353
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtct 183  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  20976398 tttttcatatttcttaagaaaatttgtcagtgtaattaatgtgtct 20976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 32067824 - 32067906
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgttt 220  Q
    ||||| |||||||||||||||||| || |||  |||| |||||||| |||| ||||| |||||||  ||| |||| |||||||    
T  32067824 ttttttacatttcttaagaaaaatagttagtgcaattcatgtgtctattttgtgtgttaatattaccaaattgtcatttgttt 32067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 32401491 - 32401453
Alignment:
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  32401491 tgtcttttgtttgtatgtgtattaaatttgatttttcat 32401453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 9375746 - 9375638
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||| |||||||| | |||  ||||||| | | | |||| ||||  |||||||  ||| |||||||||||||||||| ||||||||||    
T  9375746 tttttcacattt-ttaggaaaaattattagtgcaattaatatatttattttgtgtgctaatattaccaaattgtcttttgtttgtatgtttattaaattt 9375648  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  9375647 gatttttcat 9375638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 16496434 - 16496541
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||||||||||||||  |||| |||| ||| |||||| | ||||| |||  ||| | |||||||  ||| | || ||||||||||||| ||||||||||     
T  16496434 ttttcacatttcttaccaaaagttgttagtgtaattattatgtctatttg-tgtattaatattaccaaattatcctttgtttgtatgtatattaaatttg 16496532  T
Q  239 acttttcat 247  Q
    |||||||||    
T  16496533 acttttcat 16496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 32402170 - 32402118
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgt 185  Q
    |||| ||||| |||||||| || |||| |||||||| ||||||||||||||||    
T  32402170 ttgtatttttgacatttctaaaaaaaagttgtcagtttaattaatgtgtctgt 32402118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 29676880 - 29676751
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||| | |||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||  |||    
T  29676880 ctccgtcccttaatgtaggcacccattgcctttttcatatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgtgttaatattacgaaa 29676781  T
Q  208 ctgtcttttgtttgtatgtgtattaaattt 237  Q
     |||||||| ||||||||||||||||||||    
T  29676780 ttgtcttttatttgtatgtgtattaaattt 29676751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 13084469 - 13084361
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||  ||| | |||||||||||||||||||||||||||    
T  13084469 tttttcatatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaattt 13084370  T
Q  238 aacttttca 246  Q
     ||||||||    
T  13084369 gacttttca 13084361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 41727360 - 41727240
Alignment:
Q  127 catcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||| |||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||| ||||||| |||| |||| ||| |||||||||    
T  41727360 catccattgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcctttatttgtatgt 41727261  T
Q  227 gtattaaatttaacttttcat 247  Q
    ||||||||||| |||||||||    
T  41727260 gtattaaatttgacttttcat 41727240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 30476006 - 30476145
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||| | |||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  |||    
T  30476006 ctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaa 30476105  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| ||||||||||||| |||||||||| |||||||||    
T  30476106 ttgtcctttgtttgtatgtctattaaatttgacttttcat 30476145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 12077883 - 12077745
Alignment:
Q  109 tccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaac 208  Q
    |||||||| | ||||| ||| | ||||  ||||||| |||||||||||||| |||||||| |||||||||||||| |||| ||||| ||||||| ||||     
T  12077883 tccgtcccttaatgtaggcacccattgcatttttcaaatttcttaagaaaagttgtcagtgtaattaatgtgtctcttttgtgtgttaatattacaaaat 12077784  T
Q  209 tgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  12077783 tgtcatttgtttgtatgtgtattaaatttgacttttcat 12077745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 50363017 - 50363131
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||| | |||||||  ||| |||| |||||||||||||||||||    
T  50363017 ttgtttttttcacattttttaagaaaaattgtcagtgtaattaatatgtctgttttatgtattaatattaccaaattgtcatttgtttgtatgtgtatta 50363116  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  50363117 aatttgacttttcat 50363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 26517326 - 26517217
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| ||| ||||||||||||||||||||    
T  26517326 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtcctttatttgtatgtgtattaaattt 26517227  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  26517226 gacttttcat 26517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 31819401 - 31819510
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || || || ||||||||||||||||||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  31819401 tttttcacatttcttaagaaaagttatcggtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaattt 31819500  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  31819501 gacttttcat 31819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 42891409 - 42891522
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||    
T  42891409 ttgtatttttcacatttcttaagaaaagttgttagtataattaatttgtctgttttgtgtgttaatattaccaaactgtcctttgtttgtatgtatatta 42891508  T
Q  233 aatttaacttttca 246  Q
    ||||| ||||||||    
T  42891509 aatttgacttttca 42891522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 46048517 - 46048626
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| | |||||||  ||| |||| ||||||||||||||||||||||||    
T  46048517 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgtattaaattt 46048616  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  46048617 gacttttcat 46048626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 51263077 - 51263186
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| | |||||  ||| |||| ||||||||||||||||||||||||    
T  51263077 tttttcacatttcttaaaaaaaattgttagtgtaattaatgtgtctgttttatgtgttagtattactaaattgtcctttgtttgtatgtgtattaaattt 51263176  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  51263177 gacttttcat 51263186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 40645651 - 40645765
Alignment:
Q  120 atgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtt 219  Q
    ||||| ||||| |||| ||||||||||||||||||||||  ||||| || ||||||||||||||||||| ||||| |||||||  ||| |||||||||||    
T  40645651 atgtaggcatccattgcctttttcacatttcttaagaaatgttgtctgtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtt 40645750  T
Q  220 tgtatgtgtattaaa 234  Q
    |||||||||||||||    
T  40645751 tgtatgtgtattaaa 40645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 11388116 - 11388225
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||  |||| |||||||  ||| ||| |||||||||||||||||||||||||    
T  11388116 tttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattttgcgtgttaatattaccaaattgtattttgtttgtatgtgtattaaattt 11388215  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  11388216 gacttttcat 11388225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 26043014 - 26043123
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||||||||| ||||| ||| |||  ||| |||| ||||||||||||||||||||||||    
T  26043014 ttttttacatttcttaagaaaaattgtcagtgtaattaatatgtctgttttgtgtgttaatgttaccaaattgtcctttgtttgtatgtgtattaaattt 26043113  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  26043114 gacttttcat 26043123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 26121327 - 26121436
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||| ||| |||| ||||||||||||||||||||| ||    
T  26121327 ttttttacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaactt 26121426  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  26121427 gacttttcat 26121436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 37729140 - 37729031
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||| |||||||| | | | |||||||||||||||||||||||||||    
T  37729140 tttttcacatttcttaagaaaaattgttaatataattaatgtgtctattttgtgtgttaatattatcatattatcttttgtttgtatgtgtattaaattt 37729041  T
Q  238 aacttttcat 247  Q
     |||| ||||    
T  37729040 gacttctcat 37729031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 27638189 - 27638079
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||||||| || | ||| |||||||||| ||| |||| ||||| |||||||||||| |||| |||||||||||||||||||||||    
T  27638189 ctttttcacatttcttaagaaaagttattagtgtaattaatgtctctattttgtgtgttaatattataaaattgtcctttgtttgtatgtgtattaaatt 27638090  T
Q  237 taacttttcat 247  Q
    | || ||||||    
T  27638089 tgacatttcat 27638079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 20945411 - 20945302
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||| |||||||   || | || ||||||||||||||||||||||||    
T  20945411 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttatgtgttaatattacctaattatcctttgtttgtatgtgtattaaattt 20945312  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  20945311 gacttttcat 20945302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 22659575 - 22659684
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||| |||| |||||||||||||| | | |||| ||||| |||||||  ||| | |||||||||||||||||||||||||||    
T  22659575 ttttttacatttcttaagaaaagttgttagtataattaatgtatttattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaattt 22659674  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  22659675 aacttttcat 22659684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 29645353 - 29645462
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||  |||| ||| |||||||||| |||||||||||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  29645353 tttttcacatttattaagaaatgttgttagtgtaattaatgtatctgttttatgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaattt 29645452  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  29645453 gacttttcat 29645462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 46435841 - 46435735
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||  ||| |||| ||||||||||  ||||||||||||    
T  46435841 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgta--tgtattaaattt 46435744  T
Q  238 aacttttca 246  Q
     ||||||||    
T  46435743 gacttttca 46435735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 31531536 - 31531448
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||  ||||||| ||| ||||||||||||||||||    
T  31531536 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttgatattatcaaattgtcttttgtttgtatgt 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 41825247 - 41825139
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||||||| |||||||||||| |||||||| |||||||||||||| |||||||||| |||||||  ||| | |||||||||||||||||||| ||||||     
T  41825247 ttttcacacttcttaagaaaagttgtcagtgtaattaatgtgtctattttatgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 41825148  T
Q  239 acttttcat 247  Q
    || ||||||    
T  41825147 acatttcat 41825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 26998888 - 26998999
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||| |||| | ||| |||||||  ||| ||||||||||||||| |||||||||||    
T  26998888 tctttttcacatttcttaagaaaagttgtcattataattaatgtatctattttgtttgttaatattacgaaattgtcttttgtttgtacgtgtattaaat 26998987  T
Q  236 ttaacttttcat 247  Q
    || | |||||||    
T  26998988 ttgatttttcat 26998999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 41543718 - 41543609
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| |||| ||||| || || ||||||||||| |||| ||||  |||||||||||| |||||||| ||||||||||||||||||||    
T  41543718 tttttcacatttcttaaaaaaagttgtctgtgtatttaatgtgtctattttgtgtgataatattataaaattgtcttttatttgtatgtgtattaaattt 41543619  T
Q  238 aacttttcat 247  Q
     || ||||||    
T  41543618 gacatttcat 41543609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 52325614 - 52325505
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||||| |||||||| ||| |||| ||||||| ||||| ||||| ||||    
T  52325614 tttttcacatttcttaagaaaaaatgttagtgtaattaatgtgtctattttatgtgttaatattatcaaattgtcctttgtttatatgtttattacattt 52325515  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  52325514 tatttttcat 52325505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 39617345 - 39617252
Alignment:
Q  154 agaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||| |||||||| ||||||||||||||||||| | ||| |||||||  ||| |||| |||||||||||||||||||||||| |||||||||    
T  39617345 agaaaagttgtcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 39617252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 54426067 - 54425958
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||| | ||| | || || ||||||||||||| ||||| |||||||  ||| |||| ||||||| ||||||||||||||||    
T  54426067 tttttcacatttcttaagaaaaaatatcaatgtagttgatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttatatgtgtattaaattt 54425968  T
Q  238 aacttttcat 247  Q
    || |||||||    
T  54425967 aatttttcat 54425958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 14646000 - 14645892
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| ||||||||| |||| ||| |||||||||||||| |||| ||||| |||||||  ||| |||  ||||||||||||||||||||||||    
T  14646000 tttttcacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaattt 14645901  T
Q  238 aacttttca 246  Q
     | ||||||    
T  14645900 gatttttca 14645892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 50092633 - 50092772
Alignment:
Q  108 ctccgtcccatgatgtacgcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaa 207  Q
    ||||||||| | ||||| ||||| |||| |||||| ||||||||||| |||| ||| |||| ||||||||||||  ||||| ||| | ||||||| ||||    
T  50092633 ctccgtcccttaatgtaagcatctattgccttttttacatttcttaacaaaagttgacagtgtaattaatgtgttggttttgtgtattaatattacaaaa 50092732  T
Q  208 ctgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
     |||| ||| ||||||||||||||||| ||  ||||||||    
T  50092733 ttgtcctttatttgtatgtgtattaaaattgtcttttcat 50092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 26243462 - 26243576
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| ||||| |||||| |||| |||  |||||||| |||||||| ||| |||||| ||||| ||| |||| ||| |||| |||||||||||||||||||    
T  26243462 ttgtattttttacattttttaaaaaaggttgtcagtgtaattaatatgtttgttttgtgtgttaatgttattaaattgtcatttgtttgtatgtgtatta 26243561  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  26243562 aatttgacttttcat 26243576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 33287861 - 33287967
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| ||   ||| |||||||| ||||| |||| ||||| |||||||| ||| |||| ||||||||| ||||||||||||||    
T  33287861 tttttcacatttcttaagaaaagtttgtagtgtaattaatttgtctattttgtgtgttaatattattaaattgtcctttgtttgtttgtgtattaaattt 33287960  T
Q  238 aactttt 244  Q
     ||||||    
T  33287961 gactttt 33287967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 42010858 - 42010972
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatta 232  Q
    |||| |||||||||||||||||||||| |||| | | |||||||||||||| |||| ||||| |||||||| ||| | |  ||||||||||||| | |||    
T  42010858 ttgtttttttcacatttcttaagaaaatttgttaatgtaattaatgtgtctattttgtgtgttaatattatcaaattattctttgtttgtatgtatgtta 42010957  T
Q  233 aatttaacttttcat 247  Q
    ||||| |||||||||    
T  42010958 aatttgacttttcat 42010972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 27047288 - 27047183
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    |||||||||| ||||||||||  ||| |||  ||||||||||||| |||| ||||| |||||||  ||| ||||||||||||||||||| |||||||||     
T  27047288 ttttcacattccttaagaaaagctgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttg 27047189  T
Q  239 actttt 244  Q
    ||||||    
T  27047188 actttt 27047183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 28477395 - 28477489
Alignment:
Q  153 aagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||| ||||| ||  |||||||||||||||||| ||||| |||||||  ||| ||||||||||||||||||| ||||||||| ||| |||||    
T  28477395 aagaaaagttgtcggtgcaattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactattcat 28477489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 31474417 - 31474519
Alignment:
Q  136 tctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaat 235  Q
    ||||||| |||||| ||||||||| || |  |||||| ||||||||||||||| || || |||||||| ||| | || ||||||||||||||||||||||    
T  31474417 tcttttttacattttttaagaaaattttttggtataactaatgtgtctgttttgtgcgttaatattattaaattatcatttgtttgtatgtgtattaaat 31474516  T
Q  236 tta 238  Q
    |||    
T  31474517 tta 31474519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 34055979 - 34055868
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||| |||||||||||||||||| ||||||||||| | |||||||| |||||||||| ||||| |||||||| ||| |||| ||  ||| ||||| ||||    
T  34055979 attgcctttttcacatttcttaaaaaaaattgtcaatgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcatt--tttttatgtatatt 34055882  T
Q  232 aaatttaacttttc 245  Q
    || ||| |||||||    
T  34055881 aactttgacttttc 34055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 41308888 - 41308778
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||||||||| ||||| |||||||  ||  | |  ||||||| |||||||||||||||    
T  41308888 ctttttcacatttcttaaaaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaatttattctttgtttatatgtgtattaaatt 41308789  T
Q  237 taacttttcat 247  Q
    |  ||||||||    
T  41308788 tggcttttcat 41308778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 44083621 - 44083731
Alignment:
Q  138 tttttcacatttctt-aagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    |||||||||||| || |||||||||||| | | |||||||||| ||| |||| ||||| |||||||  ||| | || |||||||||||||||||||||||    
T  44083621 tttttcacatttttttaagaaaaattgttattgtaattaatgtatctattttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatt 44083720  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  44083721 tgacttttcat 44083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 41740084 - 41739975
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||| |||||||||||| | | || ||||||||||||| |||| ||||| |||||||  ||| | || ||||||||||||||| ||||||||    
T  41740084 tttttcacattttttaagaaaaattattaatacaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaattt 41739985  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  41739984 gaattttcat 41739975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 43187210 - 43187114
Alignment:
Q  132 attgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgt 228  Q
    |||| |||||||| ||||||||| |||| |||||| | ||||||||||||||||||| ||| | |||||||  ||| |||| |||||||||||||||    
T  43187210 attgcctttttcatatttcttaaaaaaagttgtcaatgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgt 43187114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 23157093 - 23157140
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgtttt 188  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  23157093 ttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgtttt 23157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 2421080 - 2421185
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||| |||| |||| | || ||||||| | ||| | |||||||| ||||||| |||| |||| ||||||||||||| ||||||||||    
T  2421080 tttttcacatttcttaaaaaaagttgttaatacaattaattt-tctatcttatgtgttaatattacaaaattgtcatttgtttgtatgtatattaaattt 2421178  T
Q  238 aactttt 244  Q
     ||||||    
T  2421179 gactttt 2421185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 29611852 - 29611938
Alignment:
Q  161 ttgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||| ||| |||||||||||||| |||| ||||| |||||||| ||| | |||||||||||||||||||| |||||| || ||||||    
T  29611852 ttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 29611938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 50525087 - 50524981
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||||||  | || |  |||||||| ||| | |||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  50525087 tttttcacatttcttaagaaaagctctcggggtaattaatatgtatattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaattt 50524988  T
Q  238 aactttt 244  Q
     ||||||    
T  50524987 gactttt 50524981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 831471 - 831362
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||||||||||||| |||||| | |||||||||||  ||| ||  |||| |||||||  ||| |||| ||||||| ||||||||||||||||    
T  831471 tttttcatatttcttaagaaaagttgtcaatgtaattaatgtgcatgtattgcgtgttaatattaccaaattgtcctttgtttatatgtgtattaaattt 831372  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  831371 gatttttcat 831362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 21864294 - 21864401
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||| ||||||||||| ||||  |||| |||||||| |||||||||  |||||||  ||| |||||||| ||||||||| ||||||||||    
T  21864294 tttttcacatttctcaagaaaaattgacagtgcaatt-atgtgtctattttatgtgctaatattaccaaattgtctttt-tttgtatgtatattaaattt 21864391  T
Q  238 aacttttcat 247  Q
     | |||||||    
T  21864392 gaattttcat 21864401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 53717649 - 53717581
Alignment:
Q  126 gcatcaattgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgt 194  Q
    ||||| ||| ||||||| ||||||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  53717649 gcatccattatcttttttacatttcttaagaaatattgtcaatgtaattaatgtgtctgttttgtgtgt 53717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 48901625 - 48901522
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||||||| ||||||||||| || |||  ||||||| ||||| |||| ||||| |||||||  ||| |||| ||||||||||| | |||||||||| ||    
T  48901625 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgac 48901526  T
Q  241 tttt 244  Q
    ||||    
T  48901525 tttt 48901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 48903191 - 48903088
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||||||| ||||||||||| || |||  ||||||| ||||| |||| ||||| |||||||  ||| |||| ||||||||||| | |||||||||| ||    
T  48903191 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgac 48903092  T
Q  241 tttt 244  Q
    ||||    
T  48903091 tttt 48903088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 25750522 - 25750628
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| |||||||||||||||  |||| | | |||||||| ||||| |||| ||||| |||||||  ||  |||  ||||||||||||||||||||||||    
T  25750522 ttttttacatttcttaagaaaggttgttaatgtaattaatttgtctattttgtgtgttaatattaccaacttgttctttgtttgtatgtgtattaaattt 25750621  T
Q  238 aactttt 244  Q
     ||||||    
T  25750622 gactttt 25750628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 48309443 - 48309548
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||| ||||||||||||| |||| |||  ||||| ||||||| |||| | ||| ||||||| |||| | || ||||||||||||||| |||||||| ||    
T  48309443 ttcacgtttcttaagaaaagttgttagtgcaatta-tgtgtctattttgtatgttaatattacaaaattatcctttgtttgtatgtgtgttaaatttgac 48309541  T
Q  241 ttttcat 247  Q
    |||||||    
T  48309542 ttttcat 48309548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 44338078 - 44338182
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattta 238  Q
    ||||||||||| ||||||||| |||| ||| || ||||| |||||  ||| ||||| |||||||  ||| |||| ||||||| ||||||||||||||||     
T  44338078 ttttcacattttttaagaaaagttgttagtgtagttaat-tgtctaatttttgtgttaatattaccaaattgtcctttgtttctatgtgtattaaatttg 44338176  T
Q  239 actttt 244  Q
    ||||||    
T  44338177 actttt 44338182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 21932955 - 21933030
Alignment:
Q  172 attaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||| |||| ||||| |||||||  ||| | || ||||||||||||||| |||||||| |||||||||    
T  21932955 attaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 21933030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 35055816 - 35055887
Alignment:
Q  173 ttaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||||||||| |||| ||||| |||||||  ||| |||| |||| ||||||||||||||||||| ||||||    
T  35055816 ttaatgtgtctattttgtgtgttaatattaccaaattgtcatttgcttgtatgtgtattaaatttgactttt 35055887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 28243786 - 28243860
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    |||||||||||| | |||| ||||| ||||| || ||| |||| ||||||| | |||||||||||||||||||||    
T  28243786 taattaatgtgtttattttgtgtgttaatataatcaaattgtcctttgtttatgtgtgtattaaatttaactttt 28243860  T

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Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 35145234 - 35145335
Alignment:
Q  137 ctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatt 236  Q
    ||||||||||||||||||||||| |||| ||| ||||||| |||||||||         |||||||  ||| | || ||||||||||| |||||||||||    
T  35145234 ctttttcacatttcttaagaaaagttgtgagtgtaattaacgtgtctgtt---------aatattacgaaattatcctttgtttgtatttgtattaaatt 35145324  T
Q  237 taacttttcat 247  Q
    | |||||||||    
T  35145325 tgacttttcat 35145335  T

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Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 31650776 - 31650683
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtatt 231  Q
    |||||||||||| |||| ||||||||| | |  ||||||||||||| |||||||||  |||||||  ||| |||| ||| ||||||||| ||||    
T  31650776 tttttcacatttattaaaaaaaattgttaatgcaattaatgtgtctattttatgtggtaatattaccaaattgtcatttatttgtatgtatatt 31650683  T

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Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 33412071 - 33411977
Alignment:
Q  151 ttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||||||| |||  ||||||||||||| |||| ||||| |||||||  ||| ||| |||| ||||||  ||||||||||||  ||||||||    
T  33412071 ttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttttttctttgta--tgtattaaatttgtcttttcat 33411977  T

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Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 49000442 - 49000552
Alignment:
Q  133 ttgtctttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtca-atattataaaactgtcttttgtttgtatgtgtatt 231  Q
    ||||||||||||||||| ||||||||| ||||   |  ||||||||||||| |||  ||||| | ||||||| ||| |||| | ||||| ||||||||||    
T  49000442 ttgtctttttcacattttttaagaaaagttgttgatgcaattaatgtgtctattt--tgtgtaatatattatcaaagtgtcctctgtttttatgtgtatt 49000539  T
Q  232 aaatttaactttt 244  Q
    |||||||| ||||    
T  49000540 aaatttaattttt 49000552  T

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Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 5504652 - 5504604
Alignment:
Q  139 ttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttt 187  Q
    ||||||||||||||||||||  |||||||| |||||||||| |||||||    
T  5504652 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtatctgttt 5504604  T

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Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 11393917 - 11394005
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgt 226  Q
    |||||||||||| |||| |||| |||| ||| |||||||||||||| |||| ||||| |||| ||| ||| |||| ||| ||| |||||    
T  11393917 tttttcacattttttaaaaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtcatttatttatatgt 11394005  T

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Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 35765757 - 35765693
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatatta 202  Q
    |||| ||||||||||||||||| || ||||| |||||||| |||||||||| ||| | |||||||    
T  35765757 ttttccacatttcttaagaaaagttatcagtgtaattaatatgtctgttttgtgtattaatatta 35765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 11140700 - 11140791
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgta 229  Q
    |||||||||||  ||||||||| || ||||| ||| |||||||| |||||| ||||| | |||||  ||| | || ||||||||||||||||    
T  11140700 tttttcacattgtttaagaaaagttatcagtgtaaataatgtgtatgttttgtgtgttagtattaccaaattatcctttgtttgtatgtgta 11140791  T

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Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 11344553 - 11344651
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| || |  || |||||||||||||| |||| ||||| || ||||  ||| | | | || ||||||||||||||||||||    
T  11344553 tttttcacatttcttaagaaaagttattggtgtaattaatgtgtctattttgtgtgttaacattaccaaattat-tcttttttgtatgtgtattaaattt 11344651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 39931910 - 39931985
Alignment:
Q  172 attaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    |||||||||| | |||| ||||| ||  |||| ||| |||| |||||||||||||||||||||||| | |||||||    
T  39931910 attaatgtgtatattttgtgtgttaaggttattaaattgtcatttgtttgtatgtgtattaaattttagttttcat 39931985  T

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Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 28228182 - 28228283
Alignment:
Q  146 atttcttaagaaaaattgtcagtataattaatgtgtctgt-tttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaactttt 244  Q
    ||||||||| |||| |||| |||  ||||||||||| ||| ||| |||||  ||||||| |||  ||| |||||||||||||||||||||| | ||||||    
T  28228182 atttcttaaaaaaagttgttagtgcaattaatgtgt-tgtgtttgtgtgttcatattatcaaaacgtcatttgtttgtatgtgtattaaatgtgactttt 28228280  T
Q  245 cat 247  Q
    |||    
T  28228281 cat 28228283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 54556035 - 54555926
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| ||||||||| |||   ||| ||| |||||||| ||||| |||||| ||| ||| |||  ||| | || ||||||| ||||| |||||| |||    
T  54556035 tttttcatatttcttaataaatgctgttagtgtaattaatatgtctattttatatgttaattttaccaaattatcatttgtttatatgtatattaatttt 54555936  T
Q  238 aacttttcat 247  Q
    ||||||||||    
T  54555935 aacttttcat 54555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 214614 - 214720
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||  ||| ||||| |||||||  ||| |||| ||||||||||||||||||||||||    
T  214614 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaattt 214713  T
Q  238 aactttt 244  Q
     ||||||    
T  214714 gactttt 214720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 2022 - 1913
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||||||||||||||| || |||| ||| |||||||||||||| |||| ||||| |||||||  ||| | || ||||||||||||||||||||||||    
T  2022 tttttcacatttcttaagataagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaattt 1923  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  1922 gacttttcat 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 49132 - 49238
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||| ||||||||||||||||||||| | | |||||||| |||||  ||| ||||| |||||||| ||| |||| |||||||| |||| ||||||||||    
T  49132 ttttttacatttcttaagaaaaattgttaatgtaattaatatgtctactttgtgtgttaatattattaaattgtcatttgtttgcatgtttattaaattt 49231  T
Q  238 aactttt 244  Q
     ||||||    
T  49232 gactttt 49238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 61359 - 61282
Alignment:
Q  170 taattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||||| |||| |||||| ||||| |||||||| ||| |||| ||| ||| ||||||||||||||||||||||||||    
T  61359 taattaacgtgtttgttttgtgtgttaatattattaaattgtcctttatttatatgtgtattaaatttaacttttcat 61282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 99926 - 99817
Alignment:
Q  138 tttttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaattt 237  Q
    ||||||| |||| ||||||||| |||| |||  || | |||||||| |||| ||||| |||||||  ||| ||||||||||||| |||||||||||||||    
T  99926 tttttcatatttgttaagaaaagttgttagtgcaacttatgtgtctattttgtgtgttaatattacgaaattgtcttttgtttgaatgtgtattaaattt 99827  T
Q  238 aacttttcat 247  Q
     |||||||||    
T  99826 gacttttcat 99817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 38584 - 38480
Alignment:
Q  140 tttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaa 239  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||| |||||||  | | | ||  |||||| ||||| |||||||||| |    
T  38584 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttga 38485  T
Q  240 ctttt 244  Q
    |||||    
T  38484 ctttt 38480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 22082 - 22165
Alignment:
Q  164 tcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaacttttcat 247  Q
    ||||| |||||||||||| |||||| ||| | |||||||  | | |||| ||||||||||||| ||||||||||||||||||||    
T  22082 tcagtgtaattaatgtgtttgttttgtgtattaatattaccatattgtcctttgtttgtatgtatattaaatttaacttttcat 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 7577 - 7682
Alignment:
Q  141 ttcacatttcttaagaaaaattgtcagtataattaatgtgtctgttttatgtgtcaatattataaaactgtcttttgtttgtatgtgtattaaatttaac 240  Q
    ||||||||||||||||||| |||| | | ||||| | |||||| |||| | ||| | ||||| |||| |||| ||||||| |||||||||||||||| ||    
T  7577 ttcacatttcttaagaaaagttgttaatgtaattgaggtgtctattttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgac 7675  T
Q  241 ttttcat 247  Q
    |||||||    
T  7676 ttttcat 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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