View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15466_low_1 (Length: 586)

Name: NF15466_low_1
Description: NF15466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15466_low_1
NF15466_low_1
[»] chr3 (34 HSPs)
chr3 (18-564)||(32315697-32316242)
chr3 (504-564)||(26582934-26582994)
chr3 (504-564)||(14546158-14546218)
chr3 (504-586)||(38807838-38807920)
chr3 (504-564)||(27934452-27934512)
chr3 (504-564)||(33162642-33162702)
chr3 (504-562)||(46962583-46962641)
chr3 (504-586)||(27284971-27285053)
chr3 (504-586)||(52835546-52835628)
chr3 (504-564)||(16056350-16056410)
chr3 (504-564)||(17109852-17109912)
chr3 (504-564)||(27934773-27934833)
chr3 (504-564)||(29838295-29838355)
chr3 (504-564)||(32315377-32315437)
chr3 (504-564)||(46962904-46962964)
chr3 (504-564)||(49121716-49121776)
chr3 (504-564)||(49500165-49500225)
chr3 (514-564)||(26582624-26582674)
chr3 (504-561)||(42093719-42093776)
chr3 (504-586)||(49499844-49499926)
chr3 (504-586)||(50645772-50645854)
chr3 (504-560)||(21323214-21323270)
chr3 (504-564)||(29838616-29838676)
chr3 (504-564)||(50645473-50645533)
chr3 (504-564)||(55092529-55092589)
chr3 (504-562)||(33162325-33162382)
chr3 (504-586)||(7029386-7029468)
chr3 (504-561)||(14545836-14545893)
chr3 (504-564)||(19590439-19590499)
chr3 (528-564)||(42093420-42093456)
chr3 (504-564)||(52835868-52835927)
chr3 (504-564)||(55092206-55092266)
chr3 (504-553)||(17109748-17109797)
chr3 (504-586)||(38807539-38807621)
[»] chr2 (39 HSPs)
chr2 (504-586)||(30432895-30432977)
chr2 (504-586)||(41594251-41594333)
chr2 (504-586)||(18369014-18369096)
chr2 (504-586)||(29683474-29683556)
chr2 (504-564)||(2395479-2395539)
chr2 (504-586)||(14379114-14379196)
chr2 (504-586)||(28921493-28921575)
chr2 (504-561)||(30432597-30432654)
chr2 (504-586)||(37609255-37609337)
chr2 (504-564)||(3371303-3371363)
chr2 (504-564)||(10748495-10748555)
chr2 (504-564)||(12806871-12806931)
chr2 (504-564)||(13572473-13572533)
chr2 (504-564)||(14379435-14379495)
chr2 (504-564)||(25318616-25318676)
chr2 (504-564)||(29683177-29683237)
chr2 (504-564)||(33940682-33940742)
chr2 (504-564)||(42705274-42705334)
chr2 (504-562)||(38873475-38873533)
chr2 (504-586)||(2395158-2395240)
chr2 (504-564)||(4171847-4171907)
chr2 (504-556)||(6880003-6880055)
chr2 (504-564)||(7877647-7877707)
chr2 (504-564)||(18369334-18369394)
chr2 (504-564)||(28921195-28921255)
chr2 (504-564)||(41593952-41594012)
chr2 (504-548)||(13278065-13278110)
chr2 (504-564)||(13572793-13572853)
chr2 (504-564)||(19204915-19204975)
chr2 (504-564)||(32521475-32521535)
chr2 (504-555)||(3948696-3948747)
chr2 (525-564)||(32521798-32521837)
chr2 (504-586)||(3948365-3948447)
chr2 (504-586)||(19204593-19204675)
chr2 (504-564)||(3371624-3371684)
chr2 (504-564)||(7877324-7877384)
chr2 (504-564)||(12806549-12806609)
chr2 (514-562)||(17457729-17457777)
chr2 (504-564)||(37608958-37609017)
[»] chr1 (30 HSPs)
chr1 (504-564)||(26244550-26244610)
chr1 (504-586)||(50096134-50096216)
chr1 (504-586)||(20061799-20061881)
chr1 (504-564)||(28031969-28032029)
chr1 (504-562)||(50625088-50625146)
chr1 (504-586)||(20062098-20062180)
chr1 (504-586)||(39027482-39027564)
chr1 (504-586)||(43191657-43191739)
chr1 (504-564)||(14602011-14602071)
chr1 (504-564)||(37172249-37172309)
chr1 (504-559)||(47829287-47829342)
chr1 (526-564)||(33879-33917)
chr1 (504-564)||(12322415-12322476)
chr1 (504-564)||(33558-33618)
chr1 (504-564)||(12322093-12322153)
chr1 (504-564)||(18963610-18963670)
chr1 (504-564)||(33619218-33619278)
chr1 (504-564)||(42155071-42155131)
chr1 (504-555)||(14602339-14602390)
chr1 (504-553)||(28031648-28031697)
chr1 (504-586)||(37172548-37172630)
chr1 (504-553)||(39027678-39027727)
chr1 (504-553)||(50616940-50616989)
chr1 (504-553)||(50624767-50624816)
chr1 (504-564)||(26244871-26244931)
chr1 (504-564)||(39288153-39288213)
chr1 (504-564)||(50096455-50096515)
chr1 (532-586)||(10914074-10914128)
chr1 (504-556)||(42154781-42154832)
chr1 (504-564)||(47828964-47829024)
[»] scaffold0817 (2 HSPs)
scaffold0817 (504-586)||(4282-4364)
scaffold0817 (504-564)||(3984-4044)
[»] chr7 (25 HSPs)
chr7 (504-586)||(24357-24439)
chr7 (504-564)||(19158015-19158075)
chr7 (504-564)||(20757414-20757474)
chr7 (504-563)||(35026446-35026505)
chr7 (504-586)||(42516868-42516950)
chr7 (520-586)||(42517167-42517233)
chr7 (507-564)||(44483233-44483290)
chr7 (504-564)||(44219295-44219355)
chr7 (504-586)||(13426592-13426674)
chr7 (504-586)||(40729363-40729445)
chr7 (504-586)||(44483526-44483608)
chr7 (504-564)||(13426326-13426386)
chr7 (504-564)||(34595641-34595701)
chr7 (504-559)||(22364658-22364713)
chr7 (504-564)||(34595319-34595380)
chr7 (504-560)||(24684-24740)
chr7 (504-564)||(19476394-19476454)
chr7 (504-556)||(40729093-40729145)
chr7 (504-586)||(827099-827182)
chr7 (504-586)||(829110-829193)
chr7 (504-553)||(19157696-19157745)
chr7 (504-553)||(20757095-20757144)
chr7 (504-586)||(44219594-44219676)
chr7 (504-586)||(22364951-22365033)
chr7 (504-564)||(35026766-35026825)
[»] chr5 (24 HSPs)
chr5 (504-586)||(3598414-3598496)
chr5 (504-586)||(22394125-22394207)
chr5 (504-586)||(24491143-24491225)
chr5 (504-564)||(6497514-6497574)
chr5 (504-564)||(18786302-18786362)
chr5 (504-586)||(14868972-14869054)
chr5 (504-564)||(24490845-24490905)
chr5 (504-586)||(3598713-3598795)
chr5 (504-586)||(6542260-6542342)
chr5 (504-586)||(10461645-10461727)
chr5 (504-586)||(43196902-43196984)
chr5 (504-564)||(25329098-25329158)
chr5 (504-562)||(4122580-4122638)
chr5 (504-562)||(6542582-6542640)
chr5 (504-556)||(5933126-5933178)
chr5 (504-564)||(43197223-43197283)
chr5 (504-562)||(14868678-14868736)
chr5 (504-562)||(40589576-40589634)
chr5 (504-564)||(4122899-4122959)
chr5 (504-564)||(10461346-10461406)
chr5 (504-564)||(15969431-15969491)
chr5 (504-564)||(18785983-18786042)
chr5 (504-562)||(40588973-40589031)
chr5 (504-564)||(41137142-41137202)
[»] chr4 (39 HSPs)
chr4 (504-586)||(989375-989457)
chr4 (504-586)||(17865276-17865358)
chr4 (504-564)||(13683005-13683065)
chr4 (504-564)||(37815664-37815724)
chr4 (504-564)||(4712499-4712559)
chr4 (504-564)||(5720954-5721014)
chr4 (504-564)||(16960086-16960146)
chr4 (504-586)||(13492885-13492967)
chr4 (504-561)||(26314477-26314534)
chr4 (504-586)||(42239373-42239455)
chr4 (504-564)||(16491968-16492028)
chr4 (504-564)||(16959764-16959824)
chr4 (504-564)||(22487221-22487281)
chr4 (504-564)||(37815342-37815402)
chr4 (504-559)||(22487545-22487600)
chr4 (514-564)||(13683319-13683369)
chr4 (504-586)||(32592744-32592826)
chr4 (507-551)||(2184730-2184774)
chr4 (504-564)||(11021674-11021734)
chr4 (504-552)||(17107765-17107813)
chr4 (504-564)||(17864948-17865008)
chr4 (504-564)||(39385484-39385544)
chr4 (526-564)||(12792595-12792633)
chr4 (504-564)||(989078-989138)
chr4 (504-586)||(17107433-17107515)
chr4 (504-586)||(26314775-26314857)
chr4 (504-549)||(32593076-32593121)
chr4 (504-586)||(43749948-43750030)
chr4 (504-549)||(46081711-46081756)
chr4 (504-555)||(12792903-12792953)
chr4 (504-555)||(46480947-46480998)
chr4 (526-564)||(46081449-46081487)
chr4 (504-553)||(2184425-2184474)
chr4 (517-562)||(14488126-14488171)
chr4 (517-562)||(31560634-31560679)
chr4 (504-586)||(39385183-39385265)
chr4 (504-564)||(9301891-9301950)
chr4 (504-552)||(13493219-13493267)
chr4 (504-552)||(43750279-43750327)
[»] scaffold0006 (2 HSPs)
scaffold0006 (504-564)||(212413-212473)
scaffold0006 (504-586)||(212712-212794)
[»] chr8 (29 HSPs)
chr8 (504-564)||(2835415-2835475)
chr8 (504-586)||(6943957-6944039)
chr8 (504-564)||(6943658-6943718)
chr8 (504-564)||(18764286-18764346)
chr8 (504-564)||(31186375-31186435)
chr8 (504-560)||(31186670-31186726)
chr8 (504-586)||(13154240-13154322)
chr8 (504-564)||(220514-220574)
chr8 (504-564)||(689669-689729)
chr8 (504-564)||(734137-734197)
chr8 (504-564)||(858033-858093)
chr8 (504-564)||(3273042-3273102)
chr8 (504-564)||(31402913-31402973)
chr8 (504-559)||(24332585-24332640)
chr8 (507-562)||(26479618-26479673)
chr8 (504-562)||(26479327-26479385)
chr8 (504-586)||(13154539-13154621)
chr8 (520-564)||(9180367-9180411)
chr8 (504-563)||(3272750-3272809)
chr8 (527-564)||(6892070-6892107)
chr8 (504-564)||(2835126-2835186)
chr8 (504-552)||(6891780-6891828)
chr8 (504-560)||(18764611-18764667)
chr8 (504-564)||(31403235-31403295)
chr8 (525-564)||(13405770-13405809)
chr8 (505-564)||(31685672-31685731)
chr8 (504-564)||(20112427-20112483)
chr8 (526-556)||(31685972-31686002)
chr8 (504-564)||(9180046-9180106)
[»] chr6 (31 HSPs)
chr6 (504-564)||(5140691-5140751)
chr6 (504-586)||(8926188-8926270)
chr6 (504-586)||(8926489-8926571)
chr6 (504-586)||(8936445-8936527)
chr6 (504-586)||(8936746-8936828)
chr6 (504-586)||(17238334-17238416)
chr6 (504-564)||(3345341-3345401)
chr6 (504-564)||(5404601-5404661)
chr6 (504-564)||(5924150-5924210)
chr6 (499-564)||(5923822-5923887)
chr6 (504-586)||(9571696-9571778)
chr6 (504-561)||(17238033-17238090)
chr6 (504-564)||(3484784-3484844)
chr6 (504-564)||(5404892-5404952)
chr6 (504-564)||(5409217-5409277)
chr6 (504-564)||(16525515-16525575)
chr6 (504-564)||(19661351-19661411)
chr6 (504-564)||(19661671-19661731)
chr6 (504-564)||(26272302-26272362)
chr6 (504-556)||(29819416-29819468)
chr6 (504-564)||(31717176-31717236)
chr6 (504-586)||(30608867-30608949)
chr6 (504-564)||(3345021-3345081)
chr6 (504-564)||(3485096-3485156)
chr6 (504-564)||(28853485-28853545)
chr6 (504-564)||(28853807-28853867)
chr6 (504-564)||(30609188-30609248)
chr6 (504-564)||(33783720-33783780)
chr6 (504-555)||(16525197-16525248)
chr6 (514-556)||(31717476-31717518)
chr6 (504-564)||(33783397-33783457)
[»] scaffold0147 (2 HSPs)
scaffold0147 (504-563)||(25459-25518)
scaffold0147 (504-564)||(25124-25184)
[»] scaffold0167 (1 HSPs)
scaffold0167 (504-560)||(4713-4769)
[»] scaffold0137 (2 HSPs)
scaffold0137 (504-556)||(36768-36820)
scaffold0137 (504-564)||(37057-37117)
[»] scaffold0103 (2 HSPs)
scaffold0103 (504-564)||(43278-43338)
scaffold0103 (504-560)||(43604-43660)
[»] scaffold0170 (2 HSPs)
scaffold0170 (504-586)||(8542-8625)
scaffold0170 (506-564)||(8864-8922)
[»] scaffold0045 (2 HSPs)
scaffold0045 (504-564)||(43911-43971)
scaffold0045 (504-560)||(43994-44050)
[»] scaffold0028 (1 HSPs)
scaffold0028 (504-564)||(73934-73994)
[»] scaffold0021 (2 HSPs)
scaffold0021 (525-564)||(118354-118393)
scaffold0021 (504-554)||(118030-118080)
[»] scaffold0126 (1 HSPs)
scaffold0126 (504-561)||(36318-36375)


Alignment Details
Target: chr3 (Bit Score: 486; Significance: 0; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 18 - 564
Target Start/End: Complemental strand, 32316242 - 32315697
Alignment:
Q  18 gtttcccattctgagattggtggaagattttgaatccagcaaaatacatcaggaaaactgaaagccattggattaattggaagaaattacttcaattaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32316242 gtttcccattctgagattggtggaagattttgaatccagcaaaatacatcaggaaaactgaaagccattggattaattggaagaaattacttcaattaat 32316143  T
Q  118 tcaacttatatagtttaactctgtttgtaggtgcacttggttgaggcttcacacatgattagtatgaatatatatatgattagtatagtatgatatttgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32316142 tcaacttatatagtttaactctgtttgtaggtgcacttggttgaggcttcacacatgattagtatgaatatatatatgattagtatagtatgatatttgt 32316043  T
Q  218 ttaattgttttgagaaagtgattaggatgctaatgttattagaaactggaagaagcaagctagaaggttgattggacaagaaaataactactagtacacg 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32316042 ttaattgttttgagaaagtgattaggatgctaatgttattagaaactggaagaagcaagctagaaggttgattgaacaagaaaataactactagtacacg 32315943  T
Q  318 tacgattacatgcaaaatgttcatgcatgatgcagttttactctattaaacttgtatatgtgtttaagaatctttatccaccattattgaattttactaa 417  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32315942 tacgattacatgcaaaatgttcatgcatgatgcaattttactctattaaacttgtatatgtgtttaagaatctttatccaccattattgaattttactca 32315843  T
Q  418 tttggaaaaaggtaaaggaagtttgtacggaagtgtgtactaaatatgtgacatttatcatttacaaagatnnnnnnnntatttggttaaatatggaaat 517  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| || ||||||||||||||    
T  32315842 tttggaaaaaggtaaagaaagtttgtacggaagtgtgtactaaatatgtgacatttatcatttacaaagat-aaaaaaatatctgcttaaatatggaaat 32315744  T
Q  518 ggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||    
T  32315743 ggtccctgcaaatatctgatattttggttttagtccctgtaaaaata 32315697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 26582994 - 26582934
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26582994 ttaaatatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaaata 26582934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 14546218 - 14546158
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  14546218 ttaaatatggaaatggtccctgcaaatatctgacattttggtttcagtcactgtaaaaata 14546158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 38807920 - 38807838
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||       |||||||||||||||    
T  38807920 ttaaatatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaaatatatgtttggttttagtccctgc 38807838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 27934452 - 27934512
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  27934452 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 27934512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 33162702 - 33162642
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||    
T  33162702 ttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaaata 33162642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 46962583 - 46962641
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  46962583 ttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaaa 46962641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 27284971 - 27285053
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||| ||| ||||||||       |||||||||||||||    
T  27284971 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagttcctataaaaatatttttttggttttagtccctgc 27285053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 52835546 - 52835628
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||||||||       |||||||||||||||    
T  52835546 ttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgc 52835628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 16056350 - 16056410
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||| ||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  16056350 ttaaatatggaattggtccctgcaaatatctggcgttttggttttagtccctataaaaata 16056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 17109852 - 17109912
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  17109852 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccttgtaaaaata 17109912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 27934833 - 27934773
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||| ||||||||||||| |||||||||    
T  27934833 ttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaaata 27934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 29838295 - 29838355
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||| ||||||||||||||||||| |||||||    
T  29838295 ttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaata 29838355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 32315377 - 32315437
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  32315377 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctctgtaaaaata 32315437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 46962964 - 46962904
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | | ||||||||||||||| ||||||||    
T  46962964 ttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccctataaaaata 46962904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 49121716 - 49121776
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||| |||| ||||||||    
T  49121716 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagcccctataaaaata 49121776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 49500225 - 49500165
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||||||||||    
T  49500225 ttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaata 49500165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 514 - 564
Target Start/End: Original strand, 26582624 - 26582674
Alignment:
Q  514 aaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  26582624 aaatagtctccgcaaatatctgatattttggttttagtccctgtaaaaata 26582674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 561
Target Start/End: Complemental strand, 42093776 - 42093719
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaa 561  Q
    |||||||||||||||||||| ||||||||||| | ||||| ||||||||||| |||||    
T  42093776 ttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaa 42093719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 49499844 - 49499926
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||  |||||||||||   ||||||||||||||||| ||||||||       |||||||||||||||    
T  49499844 ttaaatatggaaatggtccttgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccctgc 49499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 50645854 - 50645772
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| | |||||||||||||||| |||||||||||| ||||||||       |||||||||||||||    
T  50645854 ttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaatatttttttggttttagtccctgc 50645772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 21323270 - 21323214
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    |||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||||    
T  21323270 ttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaa 21323214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 29838676 - 29838616
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||  | ||||||||||||||| | ||||||||    
T  29838676 ttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccatataaaaata 29838616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 50645473 - 50645533
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||  | ||||||||||||| ||| ||||||||    
T  50645473 ttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagttcctataaaaata 50645533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 55092589 - 55092529
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| |||||  |||||||||||||||||||||||| || |||||||||||    
T  55092589 ttaaatatgaaaatagtccctccaaatatctgacattttggttttattctctgtaaaaata 55092529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 33162325 - 33162382
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||    
T  33162325 ttaaatatgaaaatagtccccgcaaatatctgacatttt-attttagtctctgtaaaaa 33162382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 7029386 - 7029468
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||||||||||| || ||||||||||| | |||| ||| |||||||| ||||||||       |||||||||||||||    
T  7029386 ttaaatatggaaatggttcctgcaaatatctggcgtttttgttctagtccctataaaaatatttttttggttttagtccctgc 7029468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 561
Target Start/End: Original strand, 14545836 - 14545893
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaa 561  Q
    |||||| || |||| ||||  ||||||||||||||||||||||||||||| |||||||    
T  14545836 ttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccatgtaaaa 14545893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 19590439 - 19590499
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||| |||| | ||||||||||||| ||||| |||||||| || ||||||||    
T  19590439 ttaaatatggaaacggtctctgcaaatatctgacgttttgattttagtcgctataaaaata 19590499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 564
Target Start/End: Original strand, 42093420 - 42093456
Alignment:
Q  528 aatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||| |||||||||||||||||||    
T  42093420 aatatctgacattttggatttagtccctgtaaaaata 42093456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 52835927 - 52835868
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||| | ||||||||||||||| ||||||||||||    
T  52835927 ttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagt-cctgtaaaaata 52835868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 55092206 - 55092266
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| ||||| |||| | ||||||||||| |||||||||||||| || ||||||||    
T  55092206 ttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctctataaaaata 55092266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 17109748 - 17109797
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    ||||||||| |||| ||||| ||||||||||  |||||||||||||||||    
T  17109748 ttaaatatgaaaatagtccctgcaaatatctagcattttggttttagtcc 17109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 38807539 - 38807621
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||||||||| | ||||||||| | |||||||||||| || | ||||||||       |||||||||||||||    
T  38807539 ttaaatatgaaaatggtccctgtaaatatctggcgttttggttttagcccttataaaaatatttttttggttttagtccctgc 38807621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 30432977 - 30432895
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  30432977 ttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 30432895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 41594333 - 41594251
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  41594333 ttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 41594251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 18369014 - 18369096
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  18369014 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttgggttttagtccctgc 18369096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 29683556 - 29683474
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||       |||||||||||||||    
T  29683556 ttaaatatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtccctgc 29683474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 2395539 - 2395479
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2395539 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 2395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 14379114 - 14379196
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  14379114 ttaaatatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 14379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 28921575 - 28921493
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| |||||||| |||||||||||||||| ||||||||||||||       |||||||||||||||    
T  28921575 ttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtccctgc 28921493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 561
Target Start/End: Original strand, 30432597 - 30432654
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaa 561  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  30432597 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 30432654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 37609337 - 37609255
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||  ||||||||||| | ||||||||||||||||| ||||||||       |||||||||||||||    
T  37609337 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttggttttagtccctgc 37609255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 3371303 - 3371363
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||||||||||||||||||    
T  3371303 ttaaatatggaaatggtccaggtaaatatctggcgttttggttttagtccctgtaaaaata 3371363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 10748495 - 10748555
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  10748495 ttaaatatgaaaatagtctctgcaaacatctgacattttggttttagtccctgtaaaaata 10748555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 12806931 - 12806871
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||| ||||||||||||||||||| |||||||||    
T  12806931 ttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaata 12806871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 13572473 - 13572533
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||    
T  13572473 ttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaaata 13572533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 14379495 - 14379435
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||||||||    
T  14379495 ttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaata 14379435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 25318676 - 25318616
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||  ||||||||||| | ||||||||||||||||| ||||||||    
T  25318676 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaata 25318616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 29683177 - 29683237
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  29683177 ttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 29683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 33940682 - 33940742
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||| |||||||| ||||||||||||||||||||    
T  33940682 ttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccctgtaaaaata 33940742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 42705334 - 42705274
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||||||| ||||||| |||||||||||    
T  42705334 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtctctgtaaaaata 42705274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 38873475 - 38873533
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||||||||||||||  ||||||||| || ||||||||||||||||| ||||||    
T  38873475 ttaaatatggaaatggtccctccaaatatctaacgttttggttttagtccctataaaaa 38873533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 2395158 - 2395240
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||| | ||||||||||| | ||||| ||||||||||| ||||||||       |||||||||||||||    
T  2395158 ttaaatatggaaatggtcactgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgc 2395240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 4171907 - 4171847
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||| | |||||||||    
T  4171907 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctcggtaaaaata 4171847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 6880003 - 6880055
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    ||||||||| |||| |||||  |||||||||||||||||||||||||||||||    
T  6880003 ttaaatatgaaaattgtccctacaaatatctgacattttggttttagtccctg 6880055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 7877707 - 7877647
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||||||||| ||||||||||| | |||||||| |||||||| ||||||||    
T  7877707 ttaaatatgaaaatggtccctgcaaatatctggcgttttggttctagtccctataaaaata 7877647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 18369394 - 18369334
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| | || ||||||||||| | ||||||||||||||||| ||||||||    
T  18369394 ttaaatatggaaatgatacctgcaaatatctggcgttttggttttagtccctataaaaata 18369334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 28921195 - 28921255
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||| ||||||||||||||| ||||||||||||  ||||||| ||||||||| ||||||||    
T  28921195 ttaactatggaaatggtccctgcaaatatctgatgttttggtattagtccctataaaaata 28921255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 41593952 - 41594012
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| || || |||||||||||| |||||||||||||||||||||||||||    
T  41593952 ttaaatgtgaaaatagttcctgcaaatatctgatattttggttttagtccctgtaaaaata 41594012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 548
Target Start/End: Original strand, 13278065 - 13278110
Alignment:
Q  504 ttaaatatggaaatggtcccc-gcaaatatctgacattttggtttt 548  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13278065 ttaaatatggaaatggtcccctgcaaatatctgacgttttggtttt 13278110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 13572853 - 13572793
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| || |  |||||||| |||||||||||||||| ||||||||||||||    
T  13572853 ttaaatatgaaaatagttcttgcaaatatatgacattttggttttaatccctgtaaaaata 13572793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 19204975 - 19204915
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| | ||||||| | ||||||||||||||||| ||||||||||    
T  19204975 ttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtccttgtaaaaata 19204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 32521475 - 32521535
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||| || | |||||| |||| ||||||||||||||| | ||||||||    
T  32521475 ttaaatatggaaatggttccggtaaatatatgacgttttggttttagtccttctaaaaata 32521535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 555
Target Start/End: Complemental strand, 3948747 - 3948696
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccct 555  Q
    ||||||||||||||||||| |  ||||||||||| |||| ||||||||||||    
T  3948747 ttaaatatggaaatggtcctcataaatatctgacgttttagttttagtccct 3948696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 564
Target Start/End: Complemental strand, 32521837 - 32521798
Alignment:
Q  525 gcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  32521837 gcaaataattgacattttggttttagtccctgtaaaaata 32521798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 3948365 - 3948447
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||  ||||||| ||||||||||  ||||||||||| ||||||||       |||||||||||||||    
T  3948365 ttaaatatgaaaatagtccatgcaaatacctgacattttaattttagtccctataaaaatatttttttggttttagtccctgc 3948447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 19204593 - 19204675
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| |||||||| |  | ||||| ||||||||| | ||||||||       |||||||||||||||    
T  19204593 ttaaatatggaaatggtccctgcaaatatttagcgttttgattttagtccttataaaaatatttttttggttttagtccctgc 19204675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 3371684 - 3371624
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||| | | |||||  ||||||||||||||||||||| |||||||||    
T  3371684 ttaaatatgaaaattgtctcagtaaatacgtgacattttggttttagtcccagtaaaaata 3371624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 7877324 - 7877384
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||  |||||||| || |||| ||||||||||||    
T  7877324 ttaaatatgaaaatagtccctgcaaatatcatacattttgattgtagttcctgtaaaaata 7877384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 12806549 - 12806609
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||  | |||||| || | |||||| |||||||||| ||||||||    
T  12806549 ttaaatatggaaatggtccttgtaaatatttggcgttttggatttagtccctataaaaata 12806609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 562
Target Start/End: Original strand, 17457729 - 17457777
Alignment:
Q  514 aaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    |||| ||||| |||||||| ||| |||||||||||||| ||||||||||    
T  17457729 aaatagtccctgcaaatatttgaaattttggttttagttcctgtaaaaa 17457777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 37608958 - 37609017
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||  ||||| ||||| |||||||||||||||||||||| ||| |||||||    
T  37608958 ttaaatatgaaaaaagtccctgcaaa-atctgacattttggttttagtcactggaaaaata 37609017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 26244550 - 26244610
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26244550 ttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaata 26244610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 50096134 - 50096216
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  50096134 ttaaatatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 50096216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 20061799 - 20061881
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  20061799 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 20061881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 28032029 - 28031969
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28032029 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 28031969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 504 - 562
Target Start/End: Complemental strand, 50625146 - 50625088
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  50625146 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaa 50625088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 20062180 - 20062098
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||       |||||||||||||||    
T  20062180 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttgggttttagtccctgc 20062098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 39027482 - 39027564
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||| || |||| ||||||| ||||||||||||||||| ||||||||||||||||||||       |||||||||||||||    
T  39027482 ttaaatgtgaaaatagtccccggaaatatctgacattttgcttttagtccctgtaaaaatatttttttggttttagtccctgc 39027564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 43191657 - 43191739
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| |||||||||||| ||||| |||||||||||||||||||||       |||||||||||||||    
T  43191657 ttaaatatgaaaattgtccctgcaaatatctgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgc 43191739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 14602011 - 14602071
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||| | ||||||||    
T  14602011 ttaaatatggaaatggtccctgcaaatatctggcactttggttttagtccatataaaaata 14602071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 37172249 - 37172309
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||| | ||||||||||| ||||||||||||||||||||||||||||    
T  37172249 ttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaaata 37172309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 559
Target Start/End: Complemental strand, 47829342 - 47829287
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaa 559  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||||    
T  47829342 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagttcctgtaa 47829287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 33917 - 33879
Alignment:
Q  526 caaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33917 caaatatctgacattttggttttagtccctgtaaaaata 33879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 12322476 - 12322415
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgaca-ttttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  12322476 ttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaata 12322415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 33558 - 33618
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| | ||| |||| ||||||||||||| ||||||||||||||||| ||||||||    
T  33558 ttaaatatgaacatgatccctgcaaatatctgacgttttggttttagtccctataaaaata 33618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 12322093 - 12322153
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||||||| | | ||||||||||| ||||||||||||||||| ||||||||    
T  12322093 ttaaatatgaaaatggtctctgtaaatatctgacgttttggttttagtccctataaaaata 12322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 18963610 - 18963670
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| ||||||||||||| ||||||||| | | ||||||||||||||||| ||||||||    
T  18963610 ttaaatgtggaaatggtccctgcaaatatccggcgttttggttttagtccctataaaaata 18963670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 33619278 - 33619218
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| |||||||||||   ||||||||||||| ||| ||||||||    
T  33619278 ttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcctataaaaata 33619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 42155131 - 42155071
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||||||  ||||||||||||    
T  42155131 ttaaatatgaaaatagtccctgtaaatatctgacattttggttttagatcctgtaaaaata 42155071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 504 - 555
Target Start/End: Complemental strand, 14602390 - 14602339
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccct 555  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||| |||||    
T  14602390 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccct 14602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 28031648 - 28031697
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    |||||||||||||||||||| ||||||||||| | |||| ||||||||||    
T  28031648 ttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtcc 28031697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 37172630 - 37172548
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||||| |||||||| | ||||||||| | ||||| ||||||||||| ||||||||       |||||||||||||||    
T  37172630 ttaaatatggacatggtcccggtaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgc 37172548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 553
Target Start/End: Complemental strand, 39027727 - 39027678
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    |||||||||||||||||||| |||||||| ||| ||||| ||||||||||    
T  39027727 ttaaatatggaaatggtccctgcaaatatttgatattttagttttagtcc 39027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 50616940 - 50616989
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    |||||||||||||||||||| ||||||||||| | | |||||||||||||    
T  50616940 ttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 50616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 50624767 - 50624816
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    |||||||||||||||||||| ||||||||||| | | |||||||||||||    
T  50624767 ttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 50624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 26244931 - 26244871
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| || || ||||||||||||||||||||||||| |||||| |||||||    
T  26244931 ttaaatgtgaaaatagttcctgcaaatatctgacattttggttttaatccctgaaaaaata 26244871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 39288153 - 39288213
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| |||||  ||||||| |||||||||| |||||||| |||||||||||    
T  39288153 ttaaatatgaaaatagtccctccaaatatatgacattttgattttagtctctgtaaaaata 39288213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 50096515 - 50096455
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| |||||||||||||||||||||||  |||| ||||||||||    
T  50096515 ttaaatgtgaaaatagtccctgcaaatatctgacattttggtttaggtccgtgtaaaaata 50096455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 10914128 - 10914074
Alignment:
Q  532 tctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||||| ||||||||||       |||||||||||||||    
T  10914128 tctgacattttggttttagtccgtgtaaaaatatttttttggttttagtccctgc 10914074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 42154781 - 42154832
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    ||||||||||||||||||  || ||||||||| | ||||||||||||||||||    
T  42154781 ttaaatatggaaatggtcttcgtaaatatctg-cgttttggttttagtccctg 42154832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 47828964 - 47829024
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| |||| | ||||||  | |||||||| |||||||||| ||||||||    
T  47828964 ttaaatatggaaatgatccctgtaaatatacggcattttggatttagtccctataaaaata 47829024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 4364 - 4282
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  4364 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 4282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 3984 - 4044
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  3984 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 4044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 24357 - 24439
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  24357 ttaaatatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 24439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 19158075 - 19158015
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  19158075 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 19158015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 20757474 - 20757414
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  20757474 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 20757414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 504 - 563
Target Start/End: Original strand, 35026446 - 35026505
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaat 563  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  35026446 ttaaatatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaaat 35026505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 42516868 - 42516950
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||       |||||||||||||||    
T  42516868 ttaaatatggaaatggtccctgcaaatatctggcattttggttttagttcctataaaaatatttttttggttttagtccctgc 42516950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 520 - 586
Target Start/End: Complemental strand, 42517233 - 42517167
Alignment:
Q  520 tccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  42517233 tccccgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 42517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 507 - 564
Target Start/End: Original strand, 44483233 - 44483290
Alignment:
Q  507 aatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  44483233 aatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaata 44483290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 44219295 - 44219355
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  44219295 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaata 44219355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 13426674 - 13426592
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||| ||||||||| ||||||||||||| |||| |||||||||||| ||||||||       |||||||||||||||    
T  13426674 ttaaatatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaaatatttttttggttttagtccctgc 13426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 40729445 - 40729363
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| |||   ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  40729445 ttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 40729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 44483608 - 44483526
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||| || |||| |||||||||||||| | |||||||||||||||||||||||||||||       |||||||||||||||    
T  44483608 ttaaatgtgaaaatagtccccgcaaatatttaacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 44483526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 13426326 - 13426386
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||  |||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  13426326 ttaaatatcaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaata 13426386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 34595701 - 34595641
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||||||||| | ||||||||||| ||||||||||||||||| ||||||||    
T  34595701 ttaaatatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaaata 34595641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 559
Target Start/End: Original strand, 22364658 - 22364713
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaa 559  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||||||||||    
T  22364658 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaa 22364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 34595319 - 34595380
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgac-attttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  34595319 ttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaata 34595380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 24740 - 24684
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    ||||||| |||||||||||||||||||||||  | ||||||||||||||||| ||||    
T  24740 ttaaatacggaaatggtccccgcaaatatcttgcgttttggttttagtccctataaa 24684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 19476394 - 19476454
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| || ||||| || | ||||||||||||||||| ||||||||    
T  19476394 ttaaatatggaaatggtccctgccaatatttggcgttttggttttagtccctataaaaata 19476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 40729093 - 40729145
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    |||||||||||||||||||| ||||||||||| | |||| |||||||||||||    
T  40729093 ttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtccctg 40729145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 827099 - 827182
Alignment:
Q  504 ttaaatatggaaa-tggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||||||| ||||||  ||||||||||||||||||| || |||||||| ||||||||       |||||||||||||||    
T  827099 ttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccctctaaaaatattttttgggttttagtccctgc 827182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 829110 - 829193
Alignment:
Q  504 ttaaatatggaaa-tggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||||||| ||||||  ||||||||||||||||||| || |||||||| ||||||||       |||||||||||||||    
T  829110 ttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccctctaaaaatattttttgggttttagtccctgc 829193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 19157696 - 19157745
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    |||||||||||||||||||| ||||||||||| | | |||||||||||||    
T  19157696 ttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 19157745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 20757095 - 20757144
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    |||||||||||||||||||| ||||||||||| | | |||||||||||||    
T  20757095 ttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 20757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 44219676 - 44219594
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||| ||||| ||||||||||  | ||||||||||| ||||| ||||||||       |||||||||||||||    
T  44219676 ttaaatatggaaatagtccctgcaaatatcttgcgttttggttttattccctataaaaatatttttttggttttagtccctgc 44219594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 22365033 - 22364951
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||||||||||| |  ||||||||||  ||||||||||||||||  | ||||||||       |||||||||||||||    
T  22365033 ttaaatatggaaatggttcttgcaaatatcttgcattttggttttagtctttataaaaatatttttttggttttagtccctgc 22364951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 35026825 - 35026766
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| | |||||| |||||||||||||||||| | ||||||||||    
T  35026825 ttaaatatgaaaatagtccctgtaaatat-tgacattttggttttagttcatgtaaaaata 35026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 3598414 - 3598496
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||       |||||||||||||||    
T  3598414 ttaaatatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtccctgc 3598496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 22394125 - 22394207
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  22394125 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 22394207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 24491225 - 24491143
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  24491225 ttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaaatatttgtttggttttagtccctgc 24491143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 6497574 - 6497514
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  6497574 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaata 6497514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 18786362 - 18786302
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  18786362 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctgtaaaaata 18786302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 14869054 - 14868972
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||       |||||||||||||||    
T  14869054 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatatttttttggttttagtccctgc 14868972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 24490845 - 24490905
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24490845 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 24490905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 3598795 - 3598713
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||| || |||| ||||  ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  3598795 ttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 3598713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 6542260 - 6542342
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| || ||||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||    
T  6542260 ttaaatatgaaaattgttcccgcaaatatctgatattttggttttagtccatgtaaaaatatttttttggttttagtccctgc 6542342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 10461727 - 10461645
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||||||||       |||||||||||||||    
T  10461727 ttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgc 10461645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 43196902 - 43196984
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||   |||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  43196902 ttaaatatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 43196984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 25329098 - 25329158
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| |||||||||||||||||| |||||| ||||||| ||||||||||||    
T  25329098 ttaaatatgaaaatagtccccgcaaatatctgatattttgattttagttcctgtaaaaata 25329158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 4122580 - 4122638
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||| |||| ||||| |||||||| |||||||||| ||||||||||||||||||    
T  4122580 ttaaatatgaaaatagtccctgcaaatatttgacattttgattttagtccctgtaaaaa 4122638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 504 - 562
Target Start/End: Complemental strand, 6542640 - 6542582
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||| ||||||    
T  6542640 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaa 6542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 5933126 - 5933178
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    ||||||||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  5933126 ttaaatatgaaaattgtccctgcaaatatgtgacattttggttttagtccctg 5933178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 43197283 - 43197223
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| |||||||||||   |||| |||||||||||| ||||||||    
T  43197283 ttaaatatggaaatggtccctgcaaatatctggtgtttttgttttagtccctataaaaata 43197223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 14868678 - 14868736
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||||||| ||||||  |||||||||| | ||||||||||||||||| ||||||    
T  14868678 ttaaatatggaaacggtccctccaaatatctggcgttttggttttagtccctataaaaa 14868736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 562
Target Start/End: Complemental strand, 40589634 - 40589576
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    |||||||||||||||||||| ||||||||||| | ||||| ||||| ||||| ||||||    
T  40589634 ttaaatatggaaatggtccctgcaaatatctggcgttttgcttttaatccctataaaaa 40589576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 4122959 - 4122899
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| ||| || ||||||||| | ||||| ||||||||||| ||||||||    
T  4122959 ttaaatatggaaatgttcctcgtaaatatctggcgttttgcttttagtccctataaaaata 4122899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 10461346 - 10461406
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||| | ||||||||||||||||  ||||||||||    
T  10461346 ttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtctttgtaaaaata 10461406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 15969431 - 15969491
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||   ||||||| || | ||||||||||||||||| ||||||||    
T  15969431 ttaaatatggaaatggtccttacaaatatttggcgttttggttttagtccctataaaaata 15969491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 18785983 - 18786042
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||| ||||||||| || |||||||| || ||||||||||||||||||| ||||||||    
T  18785983 ttaaataaggaaatggttcctgcaaatat-tggcattttggttttagtccctataaaaata 18786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 504 - 562
Target Start/End: Complemental strand, 40589031 - 40588973
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    |||||||||||||||||||| |||||||||||   ||||| ||||| ||||| ||||||    
T  40589031 ttaaatatggaaatggtccctgcaaatatctggagttttgcttttaatccctataaaaa 40588973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 41137142 - 41137202
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| || | ||||||||||| | ||||||||||| | ||| ||||||||    
T  41137142 ttaaatatggaaatgatcactgcaaatatctggcgttttggttttaatacctataaaaata 41137202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 989457 - 989375
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||       |||||||||||||||    
T  989457 ttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatatttttttggttttagtccctgc 989375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 17865358 - 17865276
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  17865358 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 17865276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 13683005 - 13683065
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  13683005 ttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaaata 13683065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 37815724 - 37815664
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  37815724 ttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaaata 37815664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 4712559 - 4712499
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  4712559 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaata 4712499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 5720954 - 5721014
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  5720954 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 5721014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 16960146 - 16960086
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  16960146 ttaaatatggaaatggtccctgcaaatatcttgcattttggttttagtccctataaaaata 16960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 13492885 - 13492967
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||| ||||||||||||||||| ||||||||       |||||||||||||||    
T  13492885 ttaaatatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaatatttttttggttttagtccctgc 13492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 561
Target Start/End: Original strand, 26314477 - 26314534
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaa 561  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  26314477 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 26314534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 42239455 - 42239373
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||||||||| |||||||||||       |||||||||||||||    
T  42239455 ttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtctctgtaaaaatatttttttggttttagtccctgc 42239373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 16492028 - 16491968
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||| | ||||||||||||||||||||||||| ||||||||||||||    
T  16492028 ttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccctgtaaaaata 16491968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 16959764 - 16959824
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||||||||||| ||||||||    
T  16959764 ttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaaata 16959824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 22487221 - 22487281
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||| | ||||||||    
T  22487221 ttaaatatggaaatggtccccgcaaatatctggtgttttggttttagtccttataaaaata 22487281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 37815342 - 37815402
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||| ||||||||    
T  37815342 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 37815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 559
Target Start/End: Complemental strand, 22487600 - 22487545
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaa 559  Q
    ||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||    
T  22487600 ttaaatatgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaa 22487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 514 - 564
Target Start/End: Complemental strand, 13683369 - 13683319
Alignment:
Q  514 aaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  13683369 aaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaata 13683319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 32592744 - 32592826
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||| || |||| ||||| |||||||| |||||||||||||||||||| ||||||||||       |||||||||||||||    
T  32592744 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccttgtaaaaatatttttttggttttagtccctgc 32592826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 551
Target Start/End: Complemental strand, 2184774 - 2184730
Alignment:
Q  507 aatatggaaatggtccccgcaaatatctgacattttggttttagt 551  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||    
T  2184774 aatatggaaatggtccctgcaaatatctgacgttttggttttagt 2184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 11021674 - 11021734
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| ||||||||||  |||||||||| | ||||||||||||||||| ||||||||    
T  11021674 ttaaatatgaaaatggtccctacaaatatctggcgttttggttttagtccctataaaaata 11021734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 552
Target Start/End: Complemental strand, 17107813 - 17107765
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtc 552  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  17107813 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtc 17107765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 17864948 - 17865008
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||  ||||||||||| | ||||||||||||||| | ||||||||    
T  17864948 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccatataaaaata 17865008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 39385544 - 39385484
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||||||  |||||||||||| ||||| ||||| ||||| ||||||||    
T  39385544 ttaaatatggaaatggtccctacaaatatctgacgttttgcttttaatccctataaaaata 39385484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 12792595 - 12792633
Alignment:
Q  526 caaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12792595 caaatatctgtcattttggttttagtccctgtaaaaata 12792633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 989078 - 989138
Alignment:
Q  504 ttaaatatggaaatggtccccgc-aaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| || ||||||||||||||||||||||||| ||||||||||||    
T  989078 ttaaatatgaaaatagtccctgccaaatatctgacattttggttttagt-cctgtaaaaata 989138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 17107433 - 17107515
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| | |||||| || | |||| |||||||||||||| ||||||       |||||||||||||||    
T  17107433 ttaaatatggaaatggtccctgaaaatatttggcgttttagttttagtccctgttaaaatatttttttggttttagtccctgc 17107515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 26314857 - 26314775
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||||||||| |||  ||||||||||| | ||||||||||| ||||| ||||||||       |||||||||||||||    
T  26314857 ttaaatatggaaatgttcctggcaaatatctggcgttttggttttaatccctataaaaatatttttttggttttagtccctgc 26314775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 549
Target Start/End: Complemental strand, 32593121 - 32593076
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggtttta 549  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||    
T  32593121 ttaaatatggaaatggttccagcaaatatcttacattttggtttta 32593076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 43749948 - 43750030
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| |||||||||||   ||||| ||||||| ||| ||||||||       |||||||||||||||    
T  43749948 ttaaatatggaaatggtccctgcaaatatctggtgttttgattttagttcctataaaaatatttttttggttttagtccctgc 43750030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 549
Target Start/End: Complemental strand, 46081756 - 46081711
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggtttta 549  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||    
T  46081756 ttaaatatgaaaatggttcccgcaaatatctgacgttttggtttta 46081711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 555
Target Start/End: Complemental strand, 12792953 - 12792903
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccct 555  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||    
T  12792953 ttaaatatggaaatggtcct-gcaaatatctagcattttggttttagtccct 12792903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 555
Target Start/End: Original strand, 46480947 - 46480998
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccct 555  Q
    ||||||||| |||||||||  ||||||||||| | |||||||||||||||||    
T  46480947 ttaaatatgaaaatggtccttgcaaatatctggcgttttggttttagtccct 46480998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 46081449 - 46081487
Alignment:
Q  526 caaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  46081449 caaatatctgacatttttgttttagtccctataaaaata 46081487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 2184425 - 2184474
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtcc 553  Q
    ||||||||| |||| | | | |||||||||||||||||||||||||||||    
T  2184425 ttaaatatgaaaatagcctctgcaaatatctgacattttggttttagtcc 2184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 14488171 - 14488126
Alignment:
Q  517 tggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||| |||||||| |  ||||||||||||||||||||||||||    
T  14488171 tggtccctgcaaatatgtctcattttggttttagtccctgtaaaaa 14488126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 31560679 - 31560634
Alignment:
Q  517 tggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||| |||||||| |  ||||||||||||||||||||||||||    
T  31560679 tggtccctgcaaatatgtctcattttggttttagtccctgtaaaaa 31560634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 39385183 - 39385265
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| |||||  ||||||| ||||||||||| |||| || |||||||||||       |||||||||||||||    
T  39385183 ttaaatatgaaaatcgtccctccaaatatatgacattttggatttaatctctgtaaaaatatttttttggttttagtccctgc 39385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 9301950 - 9301891
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||  ||||||||||| | ||||| |||||||| || ||||||||    
T  9301950 ttaaatatggaaatggtcca-gcaaatatctggcgttttgattttagtctctataaaaata 9301891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 552
Target Start/End: Complemental strand, 13493267 - 13493219
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtc 552  Q
    |||||||||||||||||||| |||||||| |  | ||||||||||||||    
T  13493267 ttaaatatggaaatggtccctgcaaatatttagcgttttggttttagtc 13493219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 552
Target Start/End: Complemental strand, 43750327 - 43750279
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtc 552  Q
    ||||||||| |||| ||||| ||||||||| | ||||||||||||||||    
T  43750327 ttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc 43750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 212413 - 212473
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  212413 ttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccctgtaaaaata 212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 212794 - 212712
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||       |||||||||||||||    
T  212794 ttaaatatggaaatggtccccgtaaatatctgatgttttggttttagtccctataaaaatatttttttggttttagtccctgc 212712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 2835475 - 2835415
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  2835475 ttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctgtaaaaata 2835415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 6944039 - 6943957
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||       |||||||||||||||    
T  6944039 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatatttttttggttttagtccctgc 6943957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 6943658 - 6943718
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||||||    
T  6943658 ttaaatatggaaatggtccccgcaaatatttggcgttttggttttagtccctataaaaata 6943718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 18764286 - 18764346
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  18764286 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaaata 18764346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 31186375 - 31186435
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  31186375 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 31186435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 31186726 - 31186670
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  31186726 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaa 31186670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 13154240 - 13154322
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||||| |||||||||||   ||||||||||||||||| ||||||||       |||||||||||||||    
T  13154240 ttaaatatggaaatggtccctgcaaatatctggtgttttggttttagtccctctaaaaatatttttttggttttagtccctgc 13154322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 220514 - 220574
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||| ||||||||    
T  220514 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 220574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 689669 - 689729
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||| ||||||||    
T  689669 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 734137 - 734197
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||| ||||||||    
T  734137 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 734197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 858033 - 858093
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||| ||||||||    
T  858033 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 858093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 3273102 - 3273042
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3273102 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaata 3273042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 31402913 - 31402973
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  31402913 ttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccttgtaaaaata 31402973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 559
Target Start/End: Complemental strand, 24332640 - 24332585
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaa 559  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  24332640 ttaaatatgaaaattgtccctgcaaatatctgacattttagttttagtccctgtaa 24332585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 562
Target Start/End: Complemental strand, 26479673 - 26479618
Alignment:
Q  507 aatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||    
T  26479673 aatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaa 26479618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 26479327 - 26479385
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaa 562  Q
    |||||| || |||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  26479327 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaa 26479385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 13154621 - 13154539
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| |||||  |||||||||||||||||| ||||| ||||||||||||||       |||||||||||||||    
T  13154621 ttaaatatgaaaatagtccctacaaatatctgacattttgattttaatccctgtaaaaatatttttttggttttagtccctgc 13154539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 564
Target Start/End: Complemental strand, 9180411 - 9180367
Alignment:
Q  520 tccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  9180411 tccctgcaaatatctgacattttggttttaatccctgtaaaaata 9180367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 504 - 563
Target Start/End: Original strand, 3272750 - 3272809
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaat 563  Q
    ||||||||| ||||| |||| ||||||||||| | ||||||||||||||||| |||||||    
T  3272750 ttaaatatgtaaatgatccctgcaaatatctggcgttttggttttagtccctataaaaat 3272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 564
Target Start/End: Complemental strand, 6892107 - 6892070
Alignment:
Q  527 aaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6892107 aaatatctgacattttagttttagtccctgtaaaaata 6892070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 2835126 - 2835186
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||| | ||||||||||||  |||||||||||||  || ||||||||    
T  2835126 ttaaatatggaaatggtctctgcaaatatctgatgttttggttttagtttctataaaaata 2835186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 552
Target Start/End: Original strand, 6891780 - 6891828
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtc 552  Q
    |||||||||||||||||||| ||||||||||| | |||| |||||||||    
T  6891780 ttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtc 6891828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 18764667 - 18764611
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    ||||||||| |||||||||| ||||||||||| | |||||||| |||||||| ||||    
T  18764667 ttaaatatgaaaatggtccctgcaaatatctggcgttttggttatagtccctataaa 18764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 31403295 - 31403235
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| |||||||||||   ||||||||||||| | | ||||||||    
T  31403295 ttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcttataaaaata 31403235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 564
Target Start/End: Complemental strand, 13405809 - 13405770
Alignment:
Q  525 gcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  13405809 gcaaatatttgacattttggttttaatccctgtaaaaata 13405770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 564
Target Start/End: Original strand, 31685672 - 31685731
Alignment:
Q  505 taaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||| |||||| ||||||||||  | ||||||||||| ||||| ||||||||    
T  31685672 taaatatggaaaaggtccctgcaaatatctagcgttttggttttaatccctataaaaata 31685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 20112427 - 20112483
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||| ||||||||||||    
T  20112427 ttaaatatggaaatggtccctgcaaatat---acattttagttttagt-cctgtaaaaata 20112483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 556
Target Start/End: Complemental strand, 31686002 - 31685972
Alignment:
Q  526 caaatatctgacattttggttttagtccctg 556  Q
    |||||||||||||||||||||||||||||||    
T  31686002 caaatatctgacattttggttttagtccctg 31685972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 9180046 - 9180106
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||||||||| ||||||||||| | ||||| ||||| | ||| ||||||||    
T  9180046 ttaaatatgaaaatggtccctgcaaatatctggcgttttgattttaattcctataaaaata 9180106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 5140691 - 5140751
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  5140691 ttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctacaaaaata 5140751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 8926188 - 8926270
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||       |||||||||||||||    
T  8926188 ttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgc 8926270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 8926571 - 8926489
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  8926571 ttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 8926489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 8936445 - 8936527
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||       |||||||||||||||    
T  8936445 ttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgc 8936527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 8936828 - 8936746
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  8936828 ttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgc 8936746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 17238416 - 17238334
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    |||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  17238416 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaataattttttggttttagtccctgc 17238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 3345401 - 3345341
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  3345401 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 3345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 5404601 - 5404661
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||    
T  5404601 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagtccctataaaaata 5404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 5924210 - 5924150
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5924210 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaata 5924150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 499 - 564
Target Start/End: Original strand, 5923822 - 5923887
Alignment:
Q  499 tttggttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||| |||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||||||||    
T  5923822 tttgcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaata 5923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 9571778 - 9571696
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||  |||||||||||||||||| |||||||||||||||||||||       |||||||||||||||    
T  9571778 ttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaaatatttttttggttttagtccctgc 9571696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 561
Target Start/End: Original strand, 17238033 - 17238090
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaa 561  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||    
T  17238033 ttaaatatggaaatgatccctgcaaatatctgatattttggttttagtccctgcaaaa 17238090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 3484784 - 3484844
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||  ||||||||||    
T  3484784 ttaaatatggaaatgatccctgcaaatatctaacattttggttttagtctgtgtaaaaata 3484844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 5404952 - 5404892
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||| || ||||||||    
T  5404952 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaata 5404892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 5409277 - 5409217
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||| || ||||||||    
T  5409277 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaata 5409217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 16525575 - 16525515
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||| |||||||||||||||||||||| |||||||| ||||||||||    
T  16525575 ttaaatatgaaaatcgtctccgcaaatatctgacattttggatttagtccttgtaaaaata 16525515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 19661351 - 19661411
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||  |||||||||||    
T  19661351 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaata 19661411  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 19661731 - 19661671
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||  ||||||||||| | ||||||||||||||||| ||||||||    
T  19661731 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaaata 19661671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 26272362 - 26272302
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||||||||||| ||||||||    
T  26272362 ttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaata 26272302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 29819416 - 29819468
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  29819416 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctg 29819468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 31717176 - 31717236
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||| ||||| ||||||||    
T  31717176 ttaaatatggaaatggtccctgcaaatatttgacgttttggttttaatccctataaaaata 31717236  T

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Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 30608867 - 30608949
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| |||||||| ||| ||||| |||||||||||||||||||||       |||||||||||||||    
T  30608867 ttaaatatgaaaatagtccctgcaaatatttgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgc 30608949  T

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Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 3345021 - 3345081
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||| ||||| ||| |||||||| |||||||||||||||| ||||||||||    
T  3345021 ttaaatatgaaaatagtccctgcagatatctgatattttggttttagtccttgtaaaaata 3345081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 3485156 - 3485096
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| |||||||| ||||||||||||||||||||||| |||||||    
T  3485156 ttaaatgtgaaaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaaata 3485096  T

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Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 28853485 - 28853545
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||| |  ||||||| || | ||||||||||||||||||||||||||    
T  28853485 ttaaatatggaaatggtcactacaaatatttggcgttttggttttagtccctgtaaaaata 28853545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 28853867 - 28853807
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||| ||| |||| |||||  |||||||||||||||||||||||||||||| ||||||||    
T  28853867 ttaaacatgaaaatagtccctacaaatatctgacattttggttttagtccctataaaaata 28853807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 30609248 - 30609188
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| |||||||||| |||||||||||   ||||||||||||||||| ||||||||    
T  30609248 ttaaatatgaaaatggtccctgcaaatatctggtgttttggttttagtccctataaaaata 30609188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 33783780 - 33783720
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||||||||| |||| ||||||||||| | ||| ||||||||||||  ||||||||    
T  33783780 ttaaatatggaaatgatccctgcaaatatctggcgtttcggttttagtccccctaaaaata 33783720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 555
Target Start/End: Original strand, 16525197 - 16525248
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccct 555  Q
    |||||||||||||| ||||| ||||||||||||| ||||| ||||| |||||    
T  16525197 ttaaatatggaaatagtccctgcaaatatctgacgttttgcttttaatccct 16525248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 514 - 556
Target Start/End: Complemental strand, 31717518 - 31717476
Alignment:
Q  514 aaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    |||| ||||| |||||||||||| |||||||||||||||||||    
T  31717518 aaatagtccctgcaaatatctgaaattttggttttagtccctg 31717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 33783397 - 33783457
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| | || ||||| |||||||||||| |||||||||| | | ||||||||||||    
T  33783397 ttaaatatgaagatagtccctgcaaatatctgatattttggtttcaattcctgtaaaaata 33783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 504 - 563
Target Start/End: Complemental strand, 25518 - 25459
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaat 563  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  25518 ttaaatatgaaaatagtccccgcaaatatctgatattttggttttagtccctgtaaaaat 25459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 25124 - 25184
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    ||||||||| ||||||||||   |||||| |||| ||||||||||||||||| ||||||||    
T  25124 ttaaatatgaaaatggtcccaataaatatttgacgttttggttttagtccctataaaaata 25184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 4769 - 4713
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||    
T  4769 ttaaatatggaaatggtccctgcaaatatttgacgttttggttttagtccctataaa 4713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 36768 - 36820
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctg 556  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  36768 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctg 36820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 37117 - 37057
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||||||||    
T  37117 ttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaaaata 37057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 43278 - 43338
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||| || |||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  43278 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaata 43338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 43660 - 43604
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    ||||||||||||||||| |  ||||||||||| | ||||||||||||| ||| ||||    
T  43660 ttaaatatggaaatggttcttgcaaatatctggcgttttggttttagttcctataaa 43604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 8542 - 8625
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttgg-ttttagtccctgtaaaaatannnnnnnggttttagtccctgc 586  Q
    ||||||||| |||| ||||| |||||||||| ||||||||| ||||||||||||||||||||       |||||||||||||||    
T  8542 ttaaatatgaaaattgtccctgcaaatatctaacattttggtttttagtccctgtaaaaatatttttttggttttagtccctgc 8625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 8922 - 8864
Alignment:
Q  506 aaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| | |||| || | |||||| |||||||||| ||||||||    
T  8922 aaatatggaaatggtccccgtatatatttggcgttttggatttagtccctataaaaata 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 43911 - 43971
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||||||||| | ||||||||    
T  43911 ttaaatatggaaatagtcccggcaaatatctgtcgttttggttttagtccttataaaaata 43971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 44050 - 43994
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaa 560  Q
    ||||||||  |||| ||||| |||||||| |||||||||||||||||||||||||||    
T  44050 ttaaatataaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaa 43994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 73934 - 73994
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||||||||||| ||||||||| | | ||||||||||| ||||| ||||||||    
T  73934 ttaaatatggaaatggtccctgcaaatatccggcgttttggttttattccctataaaaata 73994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 564
Target Start/End: Complemental strand, 118393 - 118354
Alignment:
Q  525 gcaaatatctgacattttggttttagtccctgtaaaaata 564  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  118393 gcaaatatctgatattttggttttcgtccctgtaaaaata 118354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 118030 - 118080
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccc 554  Q
    |||||||||||||||||||| | ||||||||| | |||||| |||||||||    
T  118030 ttaaatatggaaatggtccctgtaaatatctggcgttttggatttagtccc 118080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 561
Target Start/End: Complemental strand, 36375 - 36318
Alignment:
Q  504 ttaaatatggaaatggtccccgcaaatatctgacattttggttttagtccctgtaaaa 561  Q
    ||||||||  |||| ||||| ||||||||||||| |||| |||||||||||| |||||    
T  36375 ttaaatataaaaatagtccctgcaaatatctgacgttttagttttagtccctataaaa 36318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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