View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15466_low_4 (Length: 268)
Name: NF15466_low_4
Description: NF15466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15466_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 11420057 - 11419904
Alignment:
| Q |
1 |
atgctaaacaaccaccaaattatgaaaaaccagaatcttcaagagaacctatccttgaaaactnnnnnnnnngaacatat-ttgtacaaatgcaatacag |
99 |
Q |
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| T |
11420057 |
atgctaaacaaccaccaaattatgaaaaaccagaatcttcaagagaacctatccttgaaaactaaaaaaaa--aacatatattgtacaaatgcaatacag |
11419960 |
T |
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| Q |
100 |
tttcagcagaggcaacattaataactaaacatagtaaactaaaacataaatgcatt |
155 |
Q |
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| T |
11419959 |
tttcagcagaggcaacattaataactaaacatagtaaactaaaagataaatgcatt |
11419904 |
T |
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