View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15467_high_5 (Length: 326)
Name: NF15467_high_5
Description: NF15467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15467_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 47659367 - 47659683
Alignment:
| Q |
1 |
gttattgtttcttgtatagatgattttagaactgacgaagaggagctaacatctgagcaaagacccgccatggaccgtgaagaaaacattaagtcaggca |
100 |
Q |
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| T |
47659367 |
gttattgtttcttgtatagatgattttagaactgacgaagaggagctaacatctgagcgaagacccgccatggaccgtgaagaaaacattaagtcaggca |
47659466 |
T |
|
| Q |
101 |
ataagctaataacatctgaaacaggtttagaaccaaccccagtttctattgatacgtgtcagcaaaatcctaatttgctggatcttggtgatgcttataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
47659467 |
ataagctaataacatctgaaacaggtttagaaccaaccccagtttctattgatacgtgtcagcaaaattctaatttgctggatcttggtgatgcttataa |
47659566 |
T |
|
| Q |
201 |
gctagctgtcagtaatagaggaagacaattgtctggcatgcttgcagaacattggcttgggaaagattcctcaagagttaacgaagatctaaagatattg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
47659567 |
gctagctgtcagtaatagaggaagacaattgtctggcatgcttgcagaacattggcttgggaaagattcctcaagagttaatgaagatctaaagatattg |
47659666 |
T |
|
| Q |
301 |
ttgtcacaattctctgc |
317 |
Q |
| |
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||||||||||||||||| |
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| T |
47659667 |
ttgtcacaattctctgc |
47659683 |
T |
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