View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15468_high_12 (Length: 313)
Name: NF15468_high_12
Description: NF15468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15468_high_12 |
 | |
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| [»] scaffold0491 (2 HSPs) |
| |
|
| [»] chr8 (5 HSPs) |
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| [»] chr7 (13 HSPs) |
| |
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| [»] chr1 (2 HSPs) |
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| [»] chr4 (4 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: scaffold0491 (Bit Score: 269; Significance: 1e-150; HSPs: 2)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 1440 - 1148
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
1440 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
1341 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1340 |
ttgccttaaagaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
1241 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
1240 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
1148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 6327 - 6035
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
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|
| T |
6327 |
gacataatcaaagcgacagaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
6228 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |
|
|
| T |
6227 |
ttgccttaaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaaca |
6128 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |
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|
| T |
6127 |
tatcgtgaagctttatggtttctgcttgcacaaaagaatcatgtttttgatctatcaatacatggatagaggaagcttattctctgtcttgta |
6035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 18739561 - 18739269
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
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|
| T |
18739561 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18739462 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18739461 |
ttgccttaaagaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
18739362 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18739361 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
18739269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 18744525 - 18744233
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
18744525 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18744426 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18744425 |
ttgccttaaagaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
18744326 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18744325 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
18744233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 18749486 - 18749194
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
18749486 |
gacataatcaaagcgacagaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18749387 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |
|
|
| T |
18749386 |
ttgccttaaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaaca |
18749287 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |
|
|
| T |
18749286 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggatagaggaagcttattctctgtcttgta |
18749194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 18723834 - 18723542
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
18723834 |
gacataatcaaagcgacagaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
18723735 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |
|
|
| T |
18723734 |
ttgccttaaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaaca |
18723635 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |
|
|
| T |
18723634 |
tatagtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggatagaggaagcttattctctgtcttgta |
18723542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 18733045 - 18732996
Alignment:
| Q |
163 |
cttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaag |
212 |
Q |
| |
|
|||||||| ||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
18733045 |
cttttgattagagttttagaaatgaagtgagaatattatcagaaataaag |
18732996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 1541790 - 1541498
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
1541790 |
gacatcatcaaagcaacagaagacttcgacatgagatattgcattggaaccggagcatatggaagtgtttacaaggcacaattaccatgtggaaaggttg |
1541691 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1541690 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgaca |
1541591 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
1541590 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtttttgatctatcaatacatggagagaggaagcttattctctgtcttgta |
1541498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 1595896 - 1596188
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
1595896 |
gacataatcaaagcaacagaagactttgacatgagatattgcattggaacgggagcatatggaagtgtttacagggcacaattaccaagtggaaaggttg |
1595995 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1595996 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcaccgaca |
1596095 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
1596096 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcagtacatggagaaaggaagcctgttctctgtcttgta |
1596188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 1088490 - 1088782
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
1088490 |
gacattattaaagcaacagaggactttgacatgagatattgcattggaacaggagcatatagaagtgtttacaaggcacaattaccaagtggcaaggttg |
1088589 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
1088590 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcacaaaca |
1088689 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1088690 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
1088782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 1105839 - 1106131
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
1105839 |
gacataatcaaagcaacggaagactttgacatgagatattgcattggaactggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttg |
1105938 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1105939 |
ttgccttaaagaaacttcacggctatgaagtcgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcaccgaca |
1106038 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |
|
|
| T |
1106039 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcagtacatggagaaaggaagcctgttctctatcttgta |
1106131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 1557734 - 1557442
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || |||| |
|
|
| T |
1557734 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggtaatgttg |
1557635 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
1557634 |
ttgctttaaagaaacttcacggctatgaagctgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcacaaaca |
1557535 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1557534 |
tatcgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatatatcaatacatggagaaaggaagcttgttctctgtcttgta |
1557442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 32 - 313
Target Start/End: Original strand, 1604237 - 1604518
Alignment:
| Q |
32 |
agcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaag |
131 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1604237 |
agcaacggaagacttcgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
1604336 |
T |
|
| Q |
132 |
aaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
231 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1604337 |
aaacttcacggctatgaagaagaggttccatcttttgatgagagtttcaaaaatgaagtgaaaatattatcagaaataaagcaccgacatattgtgaagc |
1604436 |
T |
|
| Q |
232 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1604437 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
1604518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 1551024 - 1550732
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||| |
|
|
| T |
1551024 |
gacattattaaagcaacagaagactttgacatgagatattgcattggaaccggagcatatggaagtgtttacaaggcacaattaccatgtggcaaggttg |
1550925 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
1550924 |
tcgccttaaagaaacttcatggctatgaagcagacgttccatcttttgatgagagtttcagaaatgaagtgagaatattgacagaaataaagcaccgaca |
1550825 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| |
|
|
| T |
1550824 |
tattgtgaagcttcatggattctgcttgcacaagagaatcatgtttttgatctatcagtacatggagagaggaagcttgttcactgtcttgta |
1550732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 2329530 - 2329822
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
2329530 |
gacatcattaaagcaacagaagactttgacattagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggaaaagttg |
2329629 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| || |
|
|
| T |
2329630 |
ttgcaataaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagatataaagcaccggca |
2329729 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||| |||||||||||||||||||| | |||| ||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| |
|
|
| T |
2329730 |
tatcgtgaagctttatggattctgtctccacagaagaatcatgtttttgatctacgagtacatggagaaaggtagcttgttctctgtcttgta |
2329822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 2337429 - 2337721
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2337429 |
gacattattaaagcaacagaagactttgacattagatattgcattgggacaggagcatatggaagtgtttataaggcacaattaccatgtggaaaagttg |
2337528 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| |
|
|
| T |
2337529 |
ttgcaataaagaaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgaaaatattatcagatataaagcaccgaca |
2337628 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||| |||||||||||||||||||| | |||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||| |
|
|
| T |
2337629 |
tatcgtgaagctttatggattctgtctccacagaagaatcatgtttttgatctacgagtacatggagaaaggtagcttgttctctggcttgta |
2337721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 2321032 - 2321324
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
|||||||| | |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
2321032 |
gacatcattagagcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggaaaagttg |
2321131 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| | ||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
2321132 |
ttgccttgaagaaacttcacggctatgaagcagagctgccagcttttgatgaaagttttagaaatgaagtgagaatattatcagaaataaagcaccgaaa |
2321231 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||| |||||||| |||||||| |
|
|
| T |
2321232 |
tattgtgaagctttatggattttgcttgcacaaaagaatcatgtttttgatctaccattacatggagagaggaagtttgttctccgtcttgta |
2321324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 21 - 311
Target Start/End: Complemental strand, 3955782 - 3955492
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||| |
|
|
| T |
3955782 |
gacatcattagagcaacaaaagactttgacattaaatattgcattggaaaaggagcatatggaagtgtttacaaggcacaattaccaagtggtaaatttg |
3955683 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||| |||| |||||||| |||| ||||| ||||| |||||| ||||||| ||||| ||||| ||||||| |||||||||||||||||||||| || | |
|
|
| T |
3955682 |
ttgcactaaaaaaacttcatagctacgaagcagaggtgccatctcttgatgaaagttttagaaatgaagtgaaaatattatcagaaataaagcacagaaa |
3955583 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttg |
311 |
Q |
| |
|
||||||||||||||||||||| || ||||| |||||| | ||||||||||||||||| || ||||| ||||||||||||||||| |||||| |
|
|
| T |
3955582 |
tattgtgaagctttatggattttgtttgcataaaagagttatgtttttgatctatcagtatatggaaaaaggaagcttgttctccgtcttg |
3955492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 21 - 304
Target Start/End: Complemental strand, 9532375 - 9532093
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| || ||||||| | || |||||||||| ||||||||||| | |||||||||||||||||||| || ||| | ||||||||| ||| || |||| |
|
|
| T |
9532375 |
gacattattaaagcaatacaacactttgacattagatattgcatatggacaggagcatatggaagtgtatacaagactcaattaccatgtgacaaagttg |
9532276 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
| |||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||| ||| |||| ||||||||||| | ||||||| ||| | | |
|
|
| T |
9532275 |
tcgccttaaagaaacttcacatctatgaagcagaggtgccatcttttgatgcgagtttcaaaaatgaagcgagaatattataaaaaataaatcacataaa |
9532176 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctc |
304 |
Q |
| |
|
|||||| |||||||||||||| || ||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
9532175 |
tattgttaagctttatggattatgattgtacaaaagaatcatgtttttgatctatcaatacgt-gagaaaggaagtttgttctc |
9532093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 30792145 - 30792438
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| || ||||||||| || |||||||||| ||||||| ||| | ||| ||| | ||| |||||| || ||| | || ||| || |||| || |||| |
|
|
| T |
30792145 |
gacattattaaagcaacataacactttgacattagatattacatcgagacatgaggacatgaaagtgtatacaagactcatttatcatgtggcaaagttg |
30792244 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
|||||||| ||||||||||| ||||||| | | || ||||||||| | ||||||| ||| |||||||||||||||||| ||||||||||| | | |
|
|
| T |
30792245 |
ttgccttatagaaacttcacaactatgaaacaaatgtgtcatcttttgttacaagtttcataaatgaagtgagaatattatcataaataaagcacataaa |
30792344 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcac-aaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| | |||||| |||||| ||||| ||| ||||| |
|
|
| T |
30792345 |
tattgttaagctttatagattctgcttgcacaaaaagaatcgtgtttttgatctatcaatacgtagagaaaagaagctagttctttgttttgta |
30792438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 19250247 - 19250538
Alignment:
| Q |
21 |
gacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttg |
120 |
Q |
| |
|
||||| || ||||||||| || |||||||||| ||||||||||| |||||| |||||| |||||| || ||| | | ||||||| |||| || |||| |
|
|
| T |
19250247 |
gacattattaaagcaacacaacactttgacattagatattgcatcatgacaggatcatatgaaagtgtatacaagactcgattaccatgtggtaaagttg |
19250346 |
T |
|
| Q |
121 |
ttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgaca |
220 |
Q |
| |
|
| || ||||||||| ||||| |||||||| || || || |||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| | | |
|
|
| T |
19250347 |
tcgctttaaagaaatttcacaactatgaagtagatgtgccgtcttttgatgcgagtttcagaattgaagtgagaatattatcatatataaaacacataaa |
19250446 |
T |
|
| Q |
221 |
tattgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || ||||| |
|
|
| T |
19250447 |
tattgttaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacat-gaaaaatgaagcttgttctcggttttgta |
19250538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 43 - 313
Target Start/End: Complemental strand, 41669093 - 41668823
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| || ||| | |||||| || |||| || ||| ||||||||||||||||| |
|
|
| T |
41669093 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
41668994 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
||||||||| || || |||||||||||| ||||||||||| ||||||| |||||||| | |||||||||| | ||||||| |||||||||||||| |
|
|
| T |
41668993 |
ctatgaagcagatgtgtcatcttttgatgtgagtttcagaattgaagtgaaaatattataaaaaataaagcagataaatattgttaagctttatggattt |
41668894 |
T |
|
| Q |
243 |
tgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||| ||||||| | |||| ||| |||||||| || ||||| |
|
|
| T |
41668893 |
tgcttgcacaaaagaataatgtttttaatctatcgatacatgaaaaaagaaagtttgttctcagttttgta |
41668823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 43 - 313
Target Start/End: Complemental strand, 42978019 - 42977749
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| || ||| | |||||| || |||| || ||| ||||||||||||||||| |
|
|
| T |
42978019 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
42977920 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
||||||||| || || |||||||||||| || |||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||||||| |
|
|
| T |
42977919 |
ctatgaagcagatgtgtcatcttttgatgcgaatttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattt |
42977820 |
T |
|
| Q |
243 |
tgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||| || ||||| |
|
|
| T |
42977819 |
tgcttgcacaaaagaatcatgtttttaatctatcaatacatgaaaaaagaaagtttgttctcggttttgta |
42977749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 313
Target Start/End: Original strand, 54122784 - 54123054
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| || ||| | |||||| || |||| || ||| ||||||||||||||||| |
|
|
| T |
54122784 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
54122883 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
||||||||| || || |||||||||||| |||||||| || |||||||||||||||| | |||||||||| | |||| | ||||||||| ||| |
|
|
| T |
54122884 |
ctatgaagcagatgtgtcatcttttgatgtgagtttcacaattgaagtgagaatattataaaaaataaagcagataaatatctttaagctttatatattt |
54122983 |
T |
|
| Q |
243 |
tgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||| || ||||| |
|
|
| T |
54122984 |
tgcttgcacaaaagaatcatgtttttaatctatcaatacatgaaaaaagaaagtttgttctcagttttgta |
54123054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 304
Target Start/End: Complemental strand, 48712677 - 48712417
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| || ||| | |||||| || |||| || ||| ||||||||||||||||| |
|
|
| T |
48712677 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaa |
48712578 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
|||| |||| || || | |||||||||| || |||||||| |||||||||||||||||| ||||||| || | ||||||| |||||||||||||| |
|
|
| T |
48712577 |
ctattaagcagatgtgtcttcttttgatgcgattttcagaattgaagtgagaatattatcaaaaataaa-cagataaatattgttaagctttatggattt |
48712479 |
T |
|
| Q |
243 |
tgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctc |
304 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||||| | |||| ||| |||||||| |
|
|
| T |
48712478 |
tgcttgcacaaaagaatcatattttcaatctatcaatacatgaaaaaagaaagtttgttctc |
48712417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 16880134 - 16880331
Alignment:
| Q |
19 |
tggacatcatcaaagcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggt |
118 |
Q |
| |
|
||||||| || |||| |||| || |||||||||| ||||||||||| || ||| |||||||||||||||| || ||| | | ||||||| | | || || |
|
|
| T |
16880134 |
tggacattattaaagaaacacaacactttgacattagatattgcatcggcacaagagcatatggaagtgtatacaagactcgattaccatcttgcaaagt |
16880233 |
T |
|
| Q |
119 |
tgttgccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaa-gtgagaatattatcagaaataaagcac |
215 |
Q |
| |
|
|| |||||||||||| ||||| |||||||| | || |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
16880234 |
tgccgccttaaagaaatttcacaactatgaagtaaaagtgtcatcttttgatgcgagtttcagaaatgaatgtgagaatattatcagaaataaagcac |
16880331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 304
Target Start/End: Original strand, 31657883 - 31658144
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| |||| |||||||||| || ||| | |||||| || |||| || |||| ||||||||||||||||| |
|
|
| T |
31657883 |
actttgacattagatattgcatcgtgacataagcacatggaagtgtatacaagactcaattatcatgtggcaaatttgtcaccttaaagaaacttcacaa |
31657982 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
||| ||| || || |||||||||||| || |||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||||||| |
|
|
| T |
31657983 |
ctacgaaatagatgtgtcatcttttgatgcgaatttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattt |
31658082 |
T |
|
| Q |
243 |
tgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctc |
304 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||| |
|
|
| T |
31658083 |
tgcttgcacaaaagaatcatgtttttaatctatcaatacatgaaaaaagaaagtttgttctc |
31658144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 124 - 313
Target Start/End: Original strand, 36620555 - 36620741
Alignment:
| Q |
124 |
ccttaaagaaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatat |
223 |
Q |
| |
|
||||||||||||||||| |||| |||| || || ||||||||||| ||||||||||| |||||||||||||||||| |||||||||| | |||| |
|
|
| T |
36620555 |
ccttaaagaaacttcacaactattaagcagatgt---atcttttgatgcgagtttcagaattgaagtgagaatattatcaaaaataaagcagataaatat |
36620651 |
T |
|
| Q |
224 |
tgtgaagctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| | | || ||| |||||||| || ||||| |
|
|
| T |
36620652 |
tgttaagctttatggattttgcttgcacaaaagaatcatgtttttaatctatcaatacatgaaaagagaaagtttgttctcggttttgta |
36620741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 304
Target Start/End: Complemental strand, 8873340 - 8873078
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||||||||||||| || ||| | |||||| || |||| || ||| ||||||||||||||||| |
|
|
| T |
8873340 |
actttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgcgaccttaaagaaacttcacaa |
8873241 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
||||||||| || || |||| ||||||| |||||||||| |||||||||||||||| | |||||||||| | ||||| | |||||||||||||| |
|
|
| T |
8873240 |
ctatgaagcagatgtgtcatcgtttgatgccagtttcagaattgaagtgagaatattataaaaaataaagcagataaatattattaagctttatggattt |
8873141 |
T |
|
| Q |
243 |
t-gcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctc |
304 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||| |
|
|
| T |
8873140 |
ttgcttgcacaaaagaatcatgtttttaatctatcaatacatgaaaaaagaaagtttgttctc |
8873078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 160 - 313
Target Start/End: Complemental strand, 39102416 - 39102263
Alignment:
| Q |
160 |
catcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctgcttgcacaaaagaat |
259 |
Q |
| |
|
|||||||||||| |||||| |||| |||||||||||||||||| |||||||||| | ||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
39102416 |
catcttttgatgcgagttttagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttgcttgcacaaaagaag |
39102317 |
T |
|
| Q |
260 |
catgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
||||||||| || |||||||||||| | | || ||| |||||||| || ||||| |
|
|
| T |
39102316 |
catgtttttaatatatcaatacatgaaaagagaaagtttgttctcggttttgta |
39102263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 43 - 313
Target Start/End: Original strand, 1257677 - 1257947
Alignment:
| Q |
43 |
actttgacatgagatattgcattggaacaggagcatatggaagtgtttataaggcacaattaccaagtggaaaggttgttgccttaaagaaacttcacgg |
142 |
Q |
| |
|
|||||||||| ||||||||||| | ||| |||||||| |||||| || ||| | |||||| || |||| | ||| ||||||||||||||||| |
|
|
| T |
1257677 |
actttgacattagatattgcatcgtgacataagcatatgaaagtgtatacaagactcaattatcatgtggccaatttgccaccttaaagaaacttcacaa |
1257776 |
T |
|
| Q |
143 |
ctatgaagccgaggttccatcttttgatgagagtttcagaaacgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattc |
242 |
Q |
| |
|
|||||||| || || ||| |||||||| ||||||||||| |||||||||||||||||| |||||||||| | ||||||| || ||||||| ||| |
|
|
| T |
1257777 |
atatgaagcagatgtgtcattttttgatgcgagtttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaaactttatgaattt |
1257876 |
T |
|
| Q |
243 |
tgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgta |
313 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||| || ||||| |
|
|
| T |
1257877 |
tgtttgcacaaaagaatcatgtttttaatctatcaatacatgaaaaaagaaagtttgttctcggttttgta |
1257947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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