View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1546_low_7 (Length: 301)
Name: NF1546_low_7
Description: NF1546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1546_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 33791442 - 33791160
Alignment:
| Q |
1 |
atcaaacacaaaagaagtgttttgatccaaaaacaccaatggatccttaccttcaacaccacaccattgaaccaacgttttccttaaattagggtccatt |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
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| T |
33791442 |
atcaaaaacaaaagaagtgttttgatccaaaaacactaatggatccttaccttcaacaccacaccattgaaccaacctttttcttaaattagggtccatt |
33791343 |
T |
|
| Q |
101 |
gaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaaagtgtaaccatttcttccaatgtcatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33791342 |
gaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaaagtgtaaccatttcttccaatgtcatac |
33791243 |
T |
|
| Q |
201 |
ctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacagttgatactaat |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33791242 |
ctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacagttgatactaat |
33791160 |
T |
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