View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15470_high_3 (Length: 254)
Name: NF15470_high_3
Description: NF15470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15470_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 9981067 - 9980826
Alignment:
| Q |
1 |
tatctttctgcttccttctcctatttttcttcctctatcatttttcctcattcttgcacacttcattatcttcattctcaacctacctcatttatcactc |
100 |
Q |
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| T |
9981067 |
tatctttctgcttccttctcctatttttcttcctctatcatttttcctcattcttgcacacttcattatcttcattctcaacctacctcatttatcactc |
9980968 |
T |
|
| Q |
101 |
cttttcattttgtactttatattcttatcaataacctcaataacacattaaagaannnnnnntctctttctctttctgtcatcttcaacctcaaagttca |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
9980967 |
tttttcattttgtactttatattcttatcaa---------taacacattaaagaaccccccctctctttctctttctgtcatcttcaacctcaaagttca |
9980877 |
T |
|
| Q |
201 |
tttaaagcacttgcttggtaaattcctttgcacctctaaagtattatctag |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
9980876 |
tttaaagcacttgcttggtaaattcctttgcacctctaaagtattctctag |
9980826 |
T |
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