View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15471_low_11 (Length: 268)
Name: NF15471_low_11
Description: NF15471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15471_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 27907451 - 27907192
Alignment:
| Q |
7 |
atcatgtctaaagtggtggagcctcctcttacaagtagcatcatctagtacaaaataagtgagaaagttcatgatacatagattgatgagatacatgttt |
106 |
Q |
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| T |
27907451 |
atcatatctaaagtggtggagcctcctcttacaagtagcatcatctagtacaaaataagtgagaaagttcatgatacatagattgatgagatacatgttt |
27907352 |
T |
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| Q |
107 |
tgtctttgcttttaaagctaagttgcttgcagcatgttttttggcattagctatgagccattttcacttttctactaactctttcgtctttttcctatca |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27907351 |
tgtctttgcttttaaagctaagttgcttgcagcatgttttttggcattagctatgagccattttcacttttctactaactctttcgtctttttcctatca |
27907252 |
T |
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| Q |
207 |
aatgcaaataattctattttatcccttcttcttggtggtattttgtttccttgccctttg |
266 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
27907251 |
aatgcaaataattctattttatcacttcttcttggtggtattttgtttccttgccatttg |
27907192 |
T |
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