View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15474_high_19 (Length: 317)

Name: NF15474_high_19
Description: NF15474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15474_high_19
NF15474_high_19
[»] chr4 (15 HSPs)
chr4 (3-306)||(11847914-11848217)
chr4 (3-306)||(8045784-8046080)
chr4 (184-258)||(53483687-53483760)
chr4 (202-269)||(15408139-15408206)
chr4 (201-257)||(8834895-8834951)
chr4 (201-257)||(13888641-13888697)
chr4 (222-263)||(15747551-15747592)
chr4 (203-255)||(14486661-14486713)
chr4 (201-257)||(15245215-15245271)
chr4 (201-252)||(22724691-22724742)
chr4 (227-257)||(15069781-15069811)
chr4 (227-257)||(15076381-15076411)
chr4 (201-257)||(15308120-15308176)
chr4 (237-269)||(37837766-37837798)
chr4 (237-269)||(42596465-42596497)
[»] scaffold0006 (1 HSPs)
scaffold0006 (3-306)||(49987-50282)
[»] scaffold1773 (1 HSPs)
scaffold1773 (3-306)||(986-1281)
[»] scaffold0026 (2 HSPs)
scaffold0026 (3-306)||(11800-12099)
scaffold0026 (13-258)||(111504-111741)
[»] chr6 (26 HSPs)
chr6 (3-306)||(29614098-29614395)
chr6 (18-270)||(23057760-23058006)
chr6 (13-257)||(23839016-23839253)
chr6 (13-302)||(18800255-18800538)
chr6 (13-269)||(10986169-10986418)
chr6 (117-306)||(930047-930229)
chr6 (16-257)||(4477678-4477912)
chr6 (42-306)||(19785820-19786076)
chr6 (42-306)||(12168211-12168467)
chr6 (42-306)||(19878304-19878560)
chr6 (42-306)||(19287120-19287376)
chr6 (42-306)||(19884080-19884336)
chr6 (3-170)||(21565294-21565459)
chr6 (177-258)||(34639986-34640067)
chr6 (197-258)||(34646660-34646721)
chr6 (202-306)||(24512794-24512899)
chr6 (212-258)||(25469704-25469750)
chr6 (205-257)||(9187498-9187550)
chr6 (201-257)||(25348486-25348542)
chr6 (201-255)||(25598643-25598697)
chr6 (201-257)||(25397172-25397228)
chr6 (223-257)||(18659450-18659484)
chr6 (223-257)||(24441673-24441707)
chr6 (201-257)||(19471335-19471391)
chr6 (230-258)||(28288509-28288537)
chr6 (223-263)||(29415551-29415591)
[»] scaffold0924 (1 HSPs)
scaffold0924 (3-306)||(702-999)
[»] chr7 (27 HSPs)
chr7 (3-270)||(15167982-15168243)
chr7 (3-262)||(18873167-18873420)
chr7 (3-298)||(12709804-12710092)
chr7 (3-298)||(13122875-13123163)
chr7 (3-253)||(10895795-10896039)
chr7 (12-298)||(13743526-13743803)
chr7 (13-261)||(14422802-14423043)
chr7 (13-257)||(16009395-16009631)
chr7 (42-304)||(12590596-12590851)
chr7 (42-306)||(13007280-13007536)
chr7 (55-255)||(16677152-16677348)
chr7 (55-255)||(17651388-17651584)
chr7 (202-306)||(21230910-21231015)
chr7 (202-257)||(11382871-11382926)
chr7 (202-257)||(11389348-11389403)
chr7 (202-269)||(20311038-20311107)
chr7 (222-263)||(831628-831669)
chr7 (222-263)||(1196808-1196849)
chr7 (222-263)||(34958578-34958619)
chr7 (201-257)||(13679492-13679548)
chr7 (203-258)||(2971254-2971309)
chr7 (203-258)||(20906461-20906516)
chr7 (227-257)||(11311083-11311113)
chr7 (242-270)||(14129216-14129244)
chr7 (242-270)||(14136062-14136090)
chr7 (242-270)||(14433034-14433062)
chr7 (201-257)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (3-262)||(22750948-22751201)
chr5 (13-268)||(38144526-38144773)
chr5 (13-257)||(28370055-28370291)
chr5 (13-257)||(19512204-19512441)
chr5 (42-262)||(23528478-23528690)
chr5 (202-269)||(22438735-22438803)
chr5 (201-257)||(18407944-18408000)
chr5 (201-257)||(23111200-23111256)
chr5 (203-258)||(19236900-19236955)
chr5 (202-268)||(42961566-42961632)
chr5 (229-258)||(17021913-17021942)
chr5 (205-258)||(22461158-22461211)
chr5 (205-258)||(22467782-22467835)
[»] chr3 (20 HSPs)
chr3 (3-270)||(14762745-14763006)
chr3 (3-255)||(38310802-38311048)
chr3 (19-255)||(20247791-20248021)
chr3 (13-257)||(9534146-9534382)
chr3 (12-255)||(24192771-24193009)
chr3 (13-258)||(23370505-23370743)
chr3 (3-170)||(55499185-55499350)
chr3 (177-306)||(41455048-41455177)
chr3 (198-268)||(16801457-16801526)
chr3 (61-258)||(24933828-24934016)
chr3 (201-257)||(18929244-18929300)
chr3 (201-257)||(17240513-17240569)
chr3 (203-258)||(13302240-13302295)
chr3 (203-258)||(13323787-13323842)
chr3 (203-258)||(12033444-12033499)
chr3 (203-258)||(13312896-13312951)
chr3 (203-258)||(17131732-17131787)
chr3 (223-258)||(23392819-23392854)
chr3 (203-258)||(51301589-51301644)
chr3 (222-258)||(2247649-2247685)
[»] scaffold0029 (1 HSPs)
scaffold0029 (41-298)||(111726-111978)
[»] scaffold0117 (2 HSPs)
scaffold0117 (5-300)||(1856-2143)
scaffold0117 (5-300)||(8533-8820)
[»] chr8 (16 HSPs)
chr8 (3-298)||(23866421-23866709)
chr8 (3-255)||(8727735-8727981)
chr8 (13-258)||(44477441-44477678)
chr8 (13-258)||(44492599-44492836)
chr8 (13-160)||(27940946-27941091)
chr8 (42-306)||(17054439-17054694)
chr8 (201-270)||(18614271-18614340)
chr8 (201-257)||(23482053-23482109)
chr8 (202-269)||(14056552-14056619)
chr8 (201-257)||(39364919-39364975)
chr8 (202-269)||(25111976-25112043)
chr8 (203-270)||(29643373-29643440)
chr8 (203-258)||(24320670-24320725)
chr8 (202-268)||(27940841-27940907)
chr8 (201-257)||(21931696-21931752)
chr8 (237-269)||(44474690-44474722)
[»] scaffold0058 (1 HSPs)
scaffold0058 (12-306)||(109-394)
[»] scaffold0025 (1 HSPs)
scaffold0025 (12-255)||(14398-14635)
[»] chr2 (19 HSPs)
chr2 (13-270)||(19661441-19661690)
chr2 (13-257)||(6483536-6483772)
chr2 (13-257)||(6487003-6487239)
chr2 (55-306)||(26583687-26583931)
chr2 (3-170)||(23089137-23089302)
chr2 (3-170)||(23101545-23101710)
chr2 (3-171)||(23878816-23878982)
chr2 (184-258)||(5706023-5706096)
chr2 (201-257)||(21908358-21908414)
chr2 (201-257)||(23265141-23265197)
chr2 (201-257)||(23280209-23280265)
chr2 (201-257)||(24661576-24661632)
chr2 (203-258)||(10577-10632)
chr2 (203-258)||(25180929-25180984)
chr2 (197-255)||(23879002-23879060)
chr2 (197-257)||(23101463-23101524)
chr2 (186-267)||(26885166-26885246)
chr2 (205-269)||(23168287-23168351)
chr2 (205-269)||(23579544-23579608)
[»] scaffold0247 (1 HSPs)
scaffold0247 (3-306)||(11149-11446)
[»] chr1 (18 HSPs)
chr1 (13-257)||(20437024-20437261)
chr1 (177-306)||(41112010-41112139)
chr1 (201-270)||(32651571-32651640)
chr1 (201-257)||(18712798-18712854)
chr1 (202-257)||(19663517-19663572)
chr1 (201-257)||(20805320-20805376)
chr1 (202-257)||(11158093-11158148)
chr1 (201-255)||(10811785-10811839)
chr1 (203-258)||(20851132-20851187)
chr1 (203-258)||(20857759-20857814)
chr1 (203-258)||(21706276-21706331)
chr1 (203-258)||(21710818-21710873)
chr1 (227-257)||(24476350-24476380)
chr1 (227-257)||(25091418-25091448)
chr1 (223-256)||(18271338-18271371)
chr1 (223-256)||(18275992-18276025)
chr1 (237-269)||(11946472-11946504)
chr1 (242-270)||(21665177-21665205)
[»] scaffold0553 (1 HSPs)
scaffold0553 (13-258)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (13-258)||(1525-1763)
[»] scaffold0090 (1 HSPs)
scaffold0090 (3-268)||(17976-18235)
[»] scaffold0634 (1 HSPs)
scaffold0634 (3-92)||(3469-3558)
[»] scaffold0154 (1 HSPs)
scaffold0154 (183-306)||(30838-30962)
[»] scaffold0476 (1 HSPs)
scaffold0476 (3-170)||(3375-3541)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-170)||(3704-3869)
[»] scaffold0796 (2 HSPs)
scaffold0796 (61-263)||(1727-1920)
scaffold0796 (61-263)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (12-96)||(806-889)
scaffold0456 (12-96)||(7951-8034)
scaffold0456 (187-262)||(916-991)
scaffold0456 (187-262)||(8061-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (184-264)||(45268-45347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (202-306)||(40482-40587)
[»] scaffold2054 (1 HSPs)
scaffold2054 (205-299)||(717-810)
[»] scaffold0019 (1 HSPs)
scaffold0019 (202-306)||(135473-135578)
[»] scaffold0310 (1 HSPs)
scaffold0310 (202-269)||(17643-17711)
[»] scaffold0235 (1 HSPs)
scaffold0235 (204-306)||(22543-22646)
[»] scaffold0020 (1 HSPs)
scaffold0020 (201-257)||(101928-101984)
[»] scaffold0004 (2 HSPs)
scaffold0004 (201-270)||(116895-116964)
scaffold0004 (223-256)||(60441-60474)
[»] scaffold0222 (1 HSPs)
scaffold0222 (201-257)||(16819-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (201-257)||(8-64)
[»] scaffold0146 (1 HSPs)
scaffold0146 (201-257)||(13631-13687)
[»] scaffold0815 (1 HSPs)
scaffold0815 (206-269)||(1453-1516)
[»] scaffold0124 (1 HSPs)
scaffold0124 (202-257)||(34276-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (201-257)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (229-268)||(5480-5519)
[»] scaffold0139 (1 HSPs)
scaffold0139 (202-257)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (186-267)||(493019-493099)
[»] scaffold0317 (1 HSPs)
scaffold0317 (201-257)||(1385-1441)
[»] scaffold0096 (1 HSPs)
scaffold0096 (201-261)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (203-258)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (203-258)||(10239-10294)
[»] scaffold1318 (1 HSPs)
scaffold1318 (203-257)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (203-269)||(23558-23624)
[»] scaffold0067 (1 HSPs)
scaffold0067 (243-299)||(46689-46746)
[»] scaffold1128 (1 HSPs)
scaffold1128 (237-269)||(529-561)
[»] scaffold0335 (1 HSPs)
scaffold0335 (201-257)||(2628-2684)


Alignment Details
Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 11847914 - 11848217
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11847914 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 11848013  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11848014 ataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtc 11848113  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 11848213  T
Q  303 ctct 306  Q
    ||||    
T  11848214 ctct 11848217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 3 - 306
Target Start/End: Complemental strand, 8046080 - 8045784
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8046080 catacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatatt 8045981  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||| ||| ||||||||| | |||||||||  || ||||||||||||||||||||||      |||| ||||||||||| | ||||||    
T  8045980 acaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaattta------ttttccaaaactatgcaattaggtc 8045887  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 302  Q
    || |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  8045886 aa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggttctaggctctcat 8045788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 53483687 - 53483760
Alignment:
Q  184 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    |||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53483687 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 15408139 - 15408206
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaa 15408206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  222 ttatgattattgagagatagtctcacccttaccttagttttg 263  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    ||||||||| ||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcaccctta 252  Q
    ||||||||||| |||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  227 attattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  227 attattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 37837798 - 37837766
Alignment:
Q  237 gatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||||||||||||||||| |||||||||||    
T  37837798 gatagtctcacccttaccttaattttgcagaaa 37837766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 42596497 - 42596465
Alignment:
Q  237 gatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||||||||||||||||| |||||||||||    
T  42596497 gatagtctcacccttaccttaattttgcagaaa 42596465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 49987 - 50282
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49987 catacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatatt 50085  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | ||||||    
T  50086 acaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtc 50179  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 302  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  50180 aa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcataaaattagacagcaaggatcggttctaggctctcct 50278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 986 - 1281
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  986 catacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatatt 1084  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | ||||||    
T  1085 acaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtc 1178  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 302  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  1179 aa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaaaaataagacagcaaggatcggttctaggctctcct 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 3 - 306
Target Start/End: Complemental strand, 12099 - 11800
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12099 catacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatatt 12000  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||      |||| ||||||||||| | ||||||    
T  11999 acaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaattta------ttttccaaaactatgcaattaggtc 11906  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcgg-ttctaggctctc 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagattatactgcatgaatcggtttctaggctctc 11806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 13 - 258
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  111504 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  111603 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 111695  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  111696 aattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 306
Target Start/End: Complemental strand, 29614395 - 29614098
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  ||     
T  29614395 catacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat- 29614297  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||     | ||||| ||||| ||||||||    
T  29614296 acaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttt-----tccaaaattatgcaactaggtc 29614202  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttcaaggttctact 29614102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 23057760 - 23058006
Alignment:
Q  18 caattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaaca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  118 tgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaatta 217  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | |||||||||||||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcaggaatta 23057953  T
Q  218 tagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  23057954 tagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 23058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 23839016 - 23839253
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||    
T  23839016 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaa-actatgccactaggtcaattttcag 211  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||      || || |||| ||||||| | |||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaattt------atcttccaaacactatgcaattaggtcaattttcag 23839207  T
Q  212 gaattatagattatgattattgagagatagtctcacccttacctta 257  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  23839208 aaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 302
Target Start/End: Original strand, 18800255 - 18800538
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||| | |||||||| ||||||| ||||||| | |||| || || ||    
T  18800255 ttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||||||     ||  ||||| |||||||| || | |||||||||||||||     
T  18800354 taacatgatcattactcattcc-ctccagaatcatcatcaaaccctaaccctcaa-----ttctattttccaaaactaagcaattaggtcaattttcaga 18800447  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagcaagaatcggtt-ctaggctctcct 302  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||| ||||||||||||    
T  18800448 aattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaa-aatcggttcctaggctctcct 18800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 10986418 - 10986169
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||    
T  10986418 ttcatcaattcatccaatcaatcgtaattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||| ||     
T  10986319 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaatttttaga 10986226  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  10986225 aattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaaa 10986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 117 - 306
Target Start/End: Complemental strand, 930229 - 930047
Alignment:
Q  117 atgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaatt 216  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||      |||||||||| | | ||||||||||||||| || |    
T  930229 atgatcattacccattcc-cttcagaaacatcatcaaaccctaaccctcaatttatttt------tcaaaactatacaattaggtcaattttcagaaact 930137  T
Q  217 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctctct 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  930136 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggttctaggctctcctctct 930047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 257
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  16 atcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaa 115  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||||     
T  4477678 atcaaatcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  116 catgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaat 215  Q
    |||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | ||||||||||||||| |||    
T  4477777 catgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaat 4477870  T
Q  216 tatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4477871 tatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 306
Target Start/End: Complemental strand, 19786076 - 19785820
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19786076 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19785980  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  ||| ||||||||       ||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  19785979 gaatcatcatcaaaccctaactttcattttattttc------caaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagata 19785887  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19785886 gtctcacccttaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 19785820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 306
Target Start/End: Original strand, 12168211 - 12168467
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  12168211 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 12168307  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  12168308 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 12168400  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  12168401 gtctcacccttaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 12168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 306
Target Start/End: Original strand, 19878304 - 19878560
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19878304 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19878400  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  19878401 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 19878493  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19878494 gtctcacccttaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 19878560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 306
Target Start/End: Original strand, 19287120 - 19287376
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19287120 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19287216  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  19287217 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 19287309  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  19287310 gtctcacccttaccttagttttgcagaaaattagacaacaaggatcgatttctaggctctcctctct 19287376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 306
Target Start/End: Original strand, 19884080 - 19884336
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19884080 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19884176  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  19884177 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 19884269  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19884270 gtctcaccctaaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 19884336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 21565459 - 21565294
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | | |||    
T  21565459 catacagaacttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacatt 21565361  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 170  Q
    | || |  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  21565360 acaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattt 21565294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 34640067 - 34639986
Alignment:
Q  177 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||| ||||||||| | | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34640067 attttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 34646721 - 34646660
Alignment:
Q  197 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34646721 taggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 24512899 - 24512794
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctct 299  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| |||  ||||||| |||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaa-aatcggttcctaggctct 24512801  T
Q  300 cctctct 306  Q
     ||||||    
T  24512800 tctctct 24512794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 25469750 - 25469704
Alignment:
Q  212 gaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25469750 gaattatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  205 ttttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    ||||||||||| || |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  223 tatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  223 tatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||| ||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 258
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  230 attgagagatagtctcacccttaccttag 258  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  223 tatgattattgagagatagtctcacccttaccttagttttg 263  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 306
Target Start/End: Complemental strand, 999 - 702
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  999 catacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatatt 901  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||| ||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||     |||   |||||||||| | ||||||    
T  900 acaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat-----tttccaaaaactatgcaattaggtc 806  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcct 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggttctagactcttct 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 270
Target Start/End: Original strand, 15167982 - 15168243
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15167982 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 15168081  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||    
T  15168082 acaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtc 15168175  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 15168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 262
Target Start/End: Original strand, 18873167 - 18873420
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18873167 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 18873266  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||    
T  18873267 acaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtc 18873360  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 262  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873361 aattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 3 - 298
Target Start/End: Complemental strand, 12710092 - 12709804
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatat 101  Q
    ||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  12710092 catacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatat 12709994  T
Q  102 tataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactagg 200  Q
    || ||  || |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||      |||| ||||||||||| | ||||    
T  12709993 tacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta------ttttccaaaactatgcaattagg 12709900  T
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 298  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12709899 tcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaagaatcggttctaggctc 12709804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 3 - 298
Target Start/End: Complemental strand, 13123163 - 13122875
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatat 101  Q
    ||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  13123163 catacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatat 13123065  T
Q  102 tataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactagg 200  Q
    || ||  || |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||      |||| ||||||||||| | ||||    
T  13123064 tacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta------ttttccaaaactatgcaattagg 13122971  T
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 298  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  13122970 tcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctc 13122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 3 - 253
Target Start/End: Complemental strand, 10896039 - 10895795
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10896039 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 10895940  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| ||||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | ||||||    
T  10895939 acaagagaattaacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtc 10895846  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttac 253  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10895845 aattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 13743526 - 13743803
Alignment:
Q  12 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagagga 111  Q
    ||||||||||| |||||| ||  |||||||| ||| ||||||||||||||||||| |||| ||||||||| |||| ||||||||  ||| || ||||  |    
T  13743526 attcatcaatttatccaaccaagcataattt-caaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  112 ttaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcag 211  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||       ||||||||||| | ||||||||||| |||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cag 13743717  T
Q  212 gaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 298  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  13743718 gaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctc 13743803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 13 - 261
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||    
T  14422802 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||     
T  14422901 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 14422994  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttagttt 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422995 aattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  16009395 ttcatcaattcatccaatcaatcataattt-caatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| |||||||||| |||||| ||||||      || || |||||| |||| | |||||||||||||||     
T  16009494 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccttaacccacaattt------atcttccaaaaccatgcaattaggtcaattttcaga 16009586  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16009587 aattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 42 - 304
Target Start/End: Complemental strand, 12590851 - 12590596
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| ||||||||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcattcca--tca 12590754  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||   ||||   ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  12590753 gaatcatcatcaaaccctaactttca---tatt---attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 12590661  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctct 304  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||    
T  12590660 gtctcacccttaccttagttttgcagaaaattagacaacaaggatcgatttctaggctctcctct 12590596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 306
Target Start/End: Original strand, 13007280 - 13007536
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  13007280 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 13007376  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13007377 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 13007469  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  13007470 gtctcacccttaccttagttttgcagaaaattagacaacaaggatcgatttctaggctctcctctct 13007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 255
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  55 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 154  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||| |  ||||| ||| |||| ||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  155 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 254  Q
    |||||||||| |||||    ||  ||   |||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattt----tatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 16677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 255
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  55 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 154  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||| |  ||||| ||| |||| ||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  155 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 254  Q
    |||||||||| |||||    ||  ||   |||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattt----tatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 17651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 21231015 - 21230910
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctct 299  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||| |||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaa-aatcggttcctaggctct 21230917  T
Q  300 cctctct 306  Q
     ||||||    
T  21230916 tctctct 21230910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 20311107 - 20311038
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaaa 269  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaa 20311038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  222 ttatgattattgagagatagtctcacccttaccttagttttg 263  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  222 ttatgattattgagagatagtctcacccttaccttagttttg 263  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  222 ttatgattattgagagatagtctcacccttaccttagttttg 263  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 13679492 - 13679548
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||  ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679492 tcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 11311083 - 11311113
Alignment:
Q  227 attattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||    
T  11311083 attattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Original strand, 14129216 - 14129244
Alignment:
Q  242 tctcacccttaccttagttttgcagaaaa 270  Q
    |||||||||||||||||||||||||||||    
T  14129216 tctcacccttaccttagttttgcagaaaa 14129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Original strand, 14136062 - 14136090
Alignment:
Q  242 tctcacccttaccttagttttgcagaaaa 270  Q
    |||||||||||||||||||||||||||||    
T  14136062 tctcacccttaccttagttttgcagaaaa 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Original strand, 14433034 - 14433062
Alignment:
Q  242 tctcacccttaccttagttttgcagaaaa 270  Q
    |||||||||||||||||||||||||||||    
T  14433034 tctcacccttaccttagttttgcagaaaa 14433062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||| | ||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 262
Target Start/End: Original strand, 22750948 - 22751201
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22750948 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 22751047  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||    
T  22751048 acaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtc 22751141  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 262  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751142 aattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 38144773 - 38144526
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  38144773 ttcatcaattcatccaatcaatcgtaattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      ||||| ||||| ||||| | |||||||||||||||     
T  38144674 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt------attttccaaaattatgcaattaggtcaattttcaga 38144582  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144581 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 38144526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  28370291 ttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  28370192 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 28370100  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28370099 aattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  19512204 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||     
T  19512303 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 19512396  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19512397 aattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 262
Target Start/End: Original strand, 23528478 - 23528690
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  23528478 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcattcca--tca 23528575  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  23528576 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 23528668  T
Q  241 gtctcacccttaccttagtttt 262  Q
    ||||||||||||||||||||||    
T  23528669 gtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 22438803 - 22438735
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaa 269  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaa 22438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18408000 - 18407944
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  18408000 tcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 23111256 - 23111200
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23111256 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 42961566 - 42961632
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 268  Q
    |||||||||| ||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 42961632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 258
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  229 tattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  205 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  205 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 270
Target Start/End: Complemental strand, 14763006 - 14762745
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14763006 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 14762907  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||    
T  14762906 acaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtc 14762813  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 14762745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 3 - 255
Target Start/End: Complemental strand, 38311048 - 38310802
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38311048 catacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatt 38310949  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||    
T  38310948 acaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtc 38310855  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  38310854 aatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  19 aattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  119 gatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattat 218  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattat 20247828  T
Q  219 agattatgattattgagagatagtctcacccttacct 255  Q
    |||||||||||||||||||||||||||||||||||||    
T  20247827 agattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  9534146 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  9534245 taacatgatcaatacccattccac-tcagaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 9534337  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9534338 aattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 12 - 255
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  12 attcatcaattcatccaatcactcataattttcaatcaatttatgat-cacagcaacaacaaagattaagttttcattctgaacattatattataagagg 110  Q
    ||||||||||| ||||||||| ||||| |||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| | |||| || ||     
T  24192771 attcatcaatttatccaatcaatcata-ttttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  111 attaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttca 210  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||      ||   |||||||||| | ||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttca 24192964  T
Q  211 ggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    | |||||||||||||||||||||||||||||||||||||||||||    
T  24192965 gaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  23370743 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | |||||||||||||||     
T  23370644 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 23370551  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370550 aattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 55499350 - 55499185
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || || ||||||||||||||||| | ||| ||||||||||||||||||||||||||||   | |||||||| |||||||| |||||| | |||    
T  55499350 catacaaaacttgatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacatt 55499252  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 170  Q
    | || |  |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  55499251 acaacataattaacatgatcattacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt 55499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 306
Target Start/End: Complemental strand, 41455177 - 41455048
Alignment:
Q  177 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 276  Q
    ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41455177 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagttagac 41455079  T
Q  277 agcaagaatcg-gttctaggctctcctctct 306  Q
    | |||| ||||  ||||||||| ||||||||    
T  41455078 aacaaggatcgatttctaggctttcctctct 41455048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 16801526 - 16801457
Alignment:
Q  198 aggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 268  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  16801526 aggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  61 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 160  Q
    |||||||||||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcattcca--tcagaatcatcatcaaaccctaa 24933919  T
Q  161 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
       |||   ||||   ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24933918 ttttca---tatt---attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18929244 - 18929300
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  18929244 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 17240569 - 17240513
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240569 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||  ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  223 tatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  222 ttatgattattgagagatagtctcacccttaccttag 258  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 41 - 298
Target Start/End: Original strand, 111726 - 111978
Alignment:
Q  41 tttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||    
T  111726 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttca 111825  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa-ttttcaggaattatagattatgattattgagagat 239  Q
    ||||| ||||||||||||||||||||||||      || || ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||    
T  111826 gaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagat 111919  T
Q  240 agtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  111920 agtctcacccttaccttagttttgcagaaaattagacagcaaggatcggttctaggctc 111978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 5 - 300
Target Start/End: Complemental strand, 2143 - 1856
Alignment:
Q  5 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 104  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||     
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  105 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 204  Q
    ||||| |||||||| ||||||||||||||  | ||| |||| ||||||||||||||||||||| ||      ||||| ||||||||| | | ||||||||    
T  2043 aagagaattaacataatcattacccattc--catcaaaatcatcatcaaaccctaaccctcaaatt------attttccaaaactatacaattaggtcaa 1952  T
Q  205 -ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctc 300  Q
     ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1951 tttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctctc 1856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 5 - 300
Target Start/End: Complemental strand, 8820 - 8533
Alignment:
Q  5 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 104  Q
    ||||||||||||||||||||| |||||||| || | |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||     
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  105 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 204  Q
    ||||| |||||||| ||||||||||||||  | ||| |||| ||||||||||||||||||||| ||      ||||| ||||||||| | | ||||||||    
T  8720 aagagaattaacataatcattacccattc--catcataatcatcatcaaaccctaaccctcaaatt------attttccaaaactatacaattaggtcaa 8629  T
Q  205 -ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctc 300  Q
     ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8628 tttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctctc 8533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 5e-87; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 3 - 298
Target Start/End: Original strand, 23866421 - 23866709
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatat 101  Q
    ||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  23866421 catacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatat 23866519  T
Q  102 tataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactagg 200  Q
    || ||  || |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | ||||    
T  23866520 tacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattagg 23866613  T
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 298  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23866614 tcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctc 23866709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 255
Target Start/End: Complemental strand, 8727981 - 8727735
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||    
T  8727981 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacatt 8727882  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | || || ||||||||||||| ||||||| || | |||||||| || |||||||||||||||||||||||      ||   |||||||||| | ||||||    
T  8727881 acaacagaattaacatgatcaatacccatacc-cctcagaatcatcgtcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtc 8727788  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 258
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  44477441 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  44477540 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 44477632  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44477633 aattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 258
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  44492599 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  44492698 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 44492790  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44492791 aattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||  | ||||||| |||||||||||||||||| |||| || || ||    
T  27941091 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 160  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||    
T  27940992 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 306
Target Start/End: Original strand, 17054439 - 17054694
Alignment:
Q  42 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 140  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  17054439 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 17054535  T
Q  141 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 240  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||    
T  17054536 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-caggaattatagattatgattattgagagata 17054628  T
Q  241 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 306  Q
    |||||||||||||||| ||||||||| ||||||||||||||  ||||  ||||||||||| ||||||    
T  17054629 gtctcacccttaccttggttttgcag-aaattagacagcaatgatcgatttctaggctctactctct 17054694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 18614271 - 18614340
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttaccttaatttagaagaaaa 18614340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 23482109 - 23482053
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23482109 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 14056619 - 14056552
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    |||||||||| | ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaa 14056552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 25111976 - 25112043
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    |||||||||| | ||| | | ||| |||||||||||||||||||||||||||||||| |||| |||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaa 25112043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 29643440 - 29643373
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||| ||| | ||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttaatttagaagaaaa 29643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 27940907 - 27940841
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 268  Q
    |||||||||| ||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 27940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| | ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 44474722 - 44474690
Alignment:
Q  237 gatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||||||||||||||||| |||||||||||    
T  44474722 gatagtctcacccttaccttaattttgcagaaa 44474690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 12 - 306
Target Start/End: Original strand, 109 - 394
Alignment:
Q  12 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagagga 111  Q
    ||||||||||| |||||| || ||||||||| ||| ||||||||||||||| ||| |||| ||||||||| |||| ||||||||  ||| || ||||  |    
T  109 attcatcaatttatccaaccaatcataattt-caaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  112 ttaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcag 211  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||       ||||||||||| | ||||||||||| |||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cag 299  T
Q  212 gaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctctct 306  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  300 aaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaaggatcggttctaggctctcctctct 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 255
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  12 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagagga 111  Q
    ||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||| || ||||||||||||||||| |||||| | |||| || || |    
T  14635 attcatcaatttatccaatcaatcata-ttttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  112 ttaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcag 211  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcag 14442  T
Q  212 gaattatagattatgattattgagagatagtctcacccttacct 255  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  14441 aaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 270
Target Start/End: Complemental strand, 19661690 - 19661441
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||    
T  19661690 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      || || ||||||||||| | |||||||||||||||     
T  19661591 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcaga 19661499  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||    
T  19661498 aattatagattatgattatcgagagaaagtctcacccttaccttaatttagaagaaaa 19661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  6483536 ttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  6483635 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 6483727  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6483728 aattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  6487003 ttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  6487102 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 6487194  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6487195 aattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 55 - 306
Target Start/End: Original strand, 26583687 - 26583931
Alignment:
Q  55 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 154  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||||| |||| || ||||||| |||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccctttcccct-cagaatcatcatcaag 26583785  T
Q  155 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 254  Q
    |||||||||||||||||||||       ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttacc 26583878  T
Q  255 ttagttttgcagaaaattagacagcaagaatcggttc-taggctctcctctct 306  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  26583879 ttagttttgcagaaaattagacagcaaggatcggttcttaggctctcctctct 26583931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 23089302 - 23089137
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | | |||    
T  23089302 catacagaacttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacatt 23089204  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 170  Q
    | || |  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  23089203 acaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattt 23089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 23101710 - 23101545
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || ||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||||  | |||||||| |||||||| |||| | | |||    
T  23101710 catacagaacttcatgaattcatccaatcaattata-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacatt 23101612  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 170  Q
    | || |  |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  23101611 acaacataattaacatgatcattacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt 23101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 23878816 - 23878982
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || |||||||||||||||||||| |  || ||||||||||||||||||||||| |||||  | |||||||| ||||||||||||||| | |||    
T  23878816 catacaaaacttcatcaattcatccaatcaattcta-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacatt 23878914  T
Q  103 ataagaggattaacatgatcatta-cccattcctcttcagaatcgtcatcaaaccctaaccctcaattta 171  Q
    | || |  |||||||||||||||| |||||||| | |||||||| ||| | |||||||||||||||||||    
T  23878915 acaacataattaacatgatcattaccccattcc-cctcagaatcatcaac-aaccctaaccctcaattta 23878982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 5706096 - 5706023
Alignment:
Q  184 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5706096 aaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 21908358 - 21908414
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  21908358 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 23265141 - 23265197
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23265141 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 23280209 - 23280265
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23280209 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 23879002 - 23879060
Alignment:
Q  197 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    ||||||||||||  | ||||||| || || |||| ||||||||||||||||||||||||    
T  23879002 taggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 23101524 - 23101463
Alignment:
Q  197 taggtcaattttcaggaattatagattatg-attattgagagatagtctcacccttacctta 257  Q
    ||||||||||||| | ||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101524 taggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  186 aactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 267  Q
    |||||| ||| ||| | ||||||||| ||||||| |||| ||||||||| ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 23168351 - 23168287
Alignment:
Q  205 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||| ||||||| |||||||| | ||| ||||| || ||||||||||||||  |||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23168287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 23579608 - 23579544
Alignment:
Q  205 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||| ||||||| |||||||| | ||| ||||| || ||||||||||||||  |||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23579544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 11149 - 11446
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||  |  ||||||| ||||||| ||||||| | |||    
T  11149 catacaaaacttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacatt 11247  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 202  Q
    | || || ||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||       ||||| |||||||| || | ||||||    
T  11248 acaacagaattaacatgatcattactcattcc-ctccagaatcatcatcaaaccctaaccctcaattct-----attttccaaaactaagcaattaggtc 11341  T
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagcaagaatcggtt-ctaggctctc 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||| |||||||||     
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaa-aatcggttcctaggctctt 11440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 20437261 - 20437024
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||| || |  ||    
T  20437261 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||     
T  20437162 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 20437069  T
Q  213 aattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20437068 aattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 177 - 306
Target Start/End: Original strand, 41112010 - 41112139
Alignment:
Q  177 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 276  Q
    ||||||||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41112010 atttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 41112108  T
Q  277 agcaagaatcg-gttctaggctctcctctct 306  Q
    |||||| ||||  ||||||||||||||||||    
T  41112109 agcaaggatcgatttctaggctctcctctct 41112139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 32651571 - 32651640
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  32651571 tcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 32651640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18712798 - 18712854
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712798 tcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 255  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  227 attattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 257
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  227 attattgagagatagtctcacccttacctta 257  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  223 tatgattattgagagatagtctcacccttacctt 256  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  223 tatgattattgagagatagtctcacccttacctt 256  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 11946472 - 11946504
Alignment:
Q  237 gatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||||||||||||||||| |||||||||||    
T  11946472 gatagtctcacccttaccttaattttgcagaaa 11946504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Original strand, 21665177 - 21665205
Alignment:
Q  242 tctcacccttaccttagttttgcagaaaa 270  Q
    |||||||||||||||||||||||||||||    
T  21665177 tctcacccttaccttagttttgcagaaaa 21665205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  10433 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | |||||||||||||||     
T  10334 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 10241  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  10240 aattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  13 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 112  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  1763 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  113 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 212  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | |||||||||||||||     
T  1664 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 1571  T
Q  213 aattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  1570 aattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 268
Target Start/End: Original strand, 17976 - 18235
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| | ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||    
T  17976 catacaaatattcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacatt 18074  T
Q  103 ataag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggt 201  Q
    | ||  || |||||||||| |||||||  ||||  || |||||| |||| ||||| ||||||||||||||||||  |     ||| ||| || | |||||    
T  18075 acaaacagaattaacatgaccattaccatttcccgtt-agaatcatcattaaaccttaaccctcaatttattttcct-----aaagctaagcaattaggt 18168  T
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 268  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18169 caattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 18235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 3469 - 3558
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 92  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3469 catacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 183 - 306
Target Start/End: Original strand, 30838 - 30962
Alignment:
Q  183 caaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagcaa 281  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  30838 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaa 30937  T
Q  282 gaatcggtt-ctaggctctcctctct 306  Q
     ||||| || ||||||||||||||||    
T  30938 -aatcgattcctaggctctcctctct 30962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 3541 - 3375
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||  | |||||||| ||||||||||||||| | |||    
T  3541 catacaaaacttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacatt 3443  T
Q  103 ataagaggattaacatga-tcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 170  Q
    | || |  |||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  3442 acaacaaaattaacatgattcattacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt 3375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 3869 - 3704
Alignment:
Q  3 catacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatt 102  Q
    |||||| || |||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||  | |||||||| |||||||| |||||| | |||    
T  3869 catacaaaacttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacatt 3771  T
Q  103 ataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 170  Q
    | || |  |||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||    
T  3770 acaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattt 3704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 61 - 263
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  61 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 160  Q
    |||||||| ||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaaccctaa 1823  T
Q  161 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtt 260  Q
    |  |||   ||||   ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttca---tatt---attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtt 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 61 - 263
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  61 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 160  Q
    |||||||| ||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaaccctaa 5846  T
Q  161 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtt 260  Q
    |  |||   ||||   ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttca---tatt---attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtt 5753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 806 - 889
Alignment:
Q  12 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 96  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacat 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 7951 - 8034
Alignment:
Q  12 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 96  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacat 8034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 916 - 991
Alignment:
Q  187 actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 262  Q
    ||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  916 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 8061 - 8136
Alignment:
Q  187 actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 262  Q
    ||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  8061 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

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Target: scaffold0129 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 45347 - 45268
Alignment:
Q  184 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgc 264  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45347 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagatttgc 45268  T

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Target: scaffold0107 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 40587 - 40482
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctct 299  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||| |||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaa-aatcggttcctaggctct 40489  T
Q  300 cctctct 306  Q
     ||||||    
T  40488 tctctct 40482  T

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Target: scaffold2054 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 717 - 810
Alignment:
Q  205 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctct 299  Q
    ||||||| ||||||| |||| ||| ||||| ||||| || |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcag-aaataagacagcaaggatcggttctaggctct 810  T

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Target: scaffold0019 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 135473 - 135578
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggttc-taggctct 299  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||| |||  ||||||| ||||||||| ||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaa-aatcggttcttaggctct 135571  T
Q  300 cctctct 306  Q
     ||||||    
T  135572 tctctct 135578  T

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Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 17643 - 17711
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaa 269  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaa 17711  T

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Target: scaffold0235 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 22646 - 22543
Alignment:
Q  204 attttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctctcc 301  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||| | |||||||||| |||  ||||||| |||||||| ||||||||| |    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaa-aatcggttcctaggctcttc 22548  T
Q  302 tctct 306  Q
    |||||    
T  22547 tctct 22543  T

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Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 101984 - 101928
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  101984 tcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 116895 - 116964
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 270  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  116895 tcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 116964  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  223 tatgattattgagagatagtctcacccttacctt 256  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

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Target: scaffold0222 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 16819 - 16875
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  16819 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0461 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 64 - 8
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  64 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 13631 - 13687
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  13631 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 1453 - 1516
Alignment:
Q  206 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    |||||| ||||||| |||| ||| |||||||| ||||||||||||||||||| |||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaaa 1516  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  229 tattgagagatagtctcacccttaccttagttttgcagaa 268  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  202 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  186 aactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 267  Q
    |||||| ||| ||| | ||||||||| ||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 1385 - 1441
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||  ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1385 tcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttt 261  Q
    ||||||||| | ||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 258  Q
    ||||||||| ||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 23624 - 23558
Alignment:
Q  203 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||||| ||||||| |||||||| ||| | ||||| || ||||||||||||||  |||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaaa 23558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 46746 - 46689
Alignment:
Q  243 ctcacccttaccttagttttgcagaa-aattagacagcaagaatcggttctaggctct 299  Q
    |||||||||||||||||||||||||| || |  ||||||| ||||||| |||||||||    
T  46746 ctcacccttaccttagttttgcagaagaaatgcacagcaaaaatcggtcctaggctct 46689  T

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Target: scaffold1128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 529 - 561
Alignment:
Q  237 gatagtctcacccttaccttagttttgcagaaa 269  Q
    ||||||||||||||||||||| |||||||||||    
T  529 gatagtctcacccttaccttaattttgcagaaa 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  201 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 257  Q
    ||||||||||| | ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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