View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15474_high_21 (Length: 305)
Name: NF15474_high_21
Description: NF15474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15474_high_21 |
 | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
|
| [»] scaffold0897 (1 HSPs) |
| | |
|
| [»] scaffold0108 (2 HSPs) |
| | |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0304 (2 HSPs) |
| | |
|
| [»] scaffold0040 (1 HSPs) |
| | |
|
| [»] scaffold0319 (1 HSPs) |
| | |
|
| [»] scaffold0193 (1 HSPs) |
| | |
|
| [»] scaffold0081 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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|
| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0001 (2 HSPs) |
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| [»] scaffold0023 (3 HSPs) |
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|
| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0323 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
| | |
|
| [»] scaffold0046 (1 HSPs) |
| | |
|
| [»] scaffold2044 (1 HSPs) |
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Alignment Details
Target: scaffold0022 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 302
Target Start/End: Complemental strand, 29987 - 29702
Alignment:
| Q |
18 |
atggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaac |
117 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
29987 |
atggcaaggctaaacttgaggaacagactcttcgatatgatcagcttttggatgaaattgctgcgtttaaatccaagcttgaggcctttcgacaagaaac |
29888 |
T |
|
| Q |
118 |
ccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggct |
217 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29887 |
ccctctaatccaatctcaagtggcagacattgactcatcaattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccatcttttggct |
29788 |
T |
|
| Q |
218 |
aaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtactcct |
302 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
29787 |
aaagaaggtctaatgaagtcagaggctcaaattgccatccagaagatcaaggaatcgaaatcttcccagcaggaaatagtactcct |
29702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0897 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0897
Description:
Target: scaffold0897; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 2614 - 2900
Alignment:
| Q |
14 |
agagatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaag |
113 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
2614 |
agagatggcaaggctaaacttgaggaacggactcttcgatatgatctgcttttagatgagattgctgcgtttaaatccaagcttgaagcctttcgacaag |
2713 |
T |
|
| Q |
114 |
aaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaactttt |
213 |
Q |
| |
|
|||| | | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2714 |
aaactcctttaatccaatctcaagtagcagacattgactcatcaattgcccagtataaggccaaaattgagtagttagaggatcaaaaagcccaactttt |
2813 |
T |
|
| Q |
214 |
ggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtact |
299 |
Q |
| |
|
||||| ||||||| ||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| ||| ||||||||||||| |
|
|
| T |
2814 |
ggctagagaaggtataatgaagtcagaggctcaaattgccatccagaagatcaaggaatcaaaatcttcccagcaggaaatagtact |
2900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 23194611 - 23194900
Alignment:
| Q |
14 |
agagatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaag |
113 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23194611 |
agagatggccgggccaaacttgaggaacggactcttcgatatgatcagcttttcgatgagattgctgcgtttaaatccaagcttgaggcctttcgacaag |
23194710 |
T |
|
| Q |
114 |
aaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaactttt |
213 |
Q |
| |
|
|||||| ||| || |||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
23194711 |
aaacccctctcattcaatcttaagtggcagacattgactcatcaattgcctagtacaaggccaaaattgagcagctagagggtcaaaaagcccaactttt |
23194810 |
T |
|
| Q |
214 |
ggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtactcct |
302 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||| |||||||| ||||||| |
|
|
| T |
23194811 |
ggctaaagaaggtctaatgaagtcagaggctcaaattgccatccagaagatcaaggaatcgaagtcttcccagcaggaaataatactcct |
23194900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 23608675 - 23608964
Alignment:
| Q |
14 |
agagatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaag |
113 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23608675 |
agagatggccgggccaaacttgaggaacggactcttcgatatgatcagcttttcgatgagattgctgcgtttaaatccaagcttgaggcctttcgacaag |
23608774 |
T |
|
| Q |
114 |
aaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaactttt |
213 |
Q |
| |
|
|||||| ||| || |||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
23608775 |
aaacccctctcattcaatcttaagtggcagacattgactcatcaattgcctagtacaaggccaaaattgagcagctagagggtcaaaaagcccaactttt |
23608874 |
T |
|
| Q |
214 |
ggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtactcct |
302 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||| |||||||| ||||||| |
|
|
| T |
23608875 |
ggctaaagaaggtctaatgaagtcagaggctcaaattgccatccagaagatcaaggaatcgaagtcttcccagcaggaaataatactcct |
23608964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 23620216 - 23620504
Alignment:
| Q |
15 |
gagatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaaga |
114 |
Q |
| |
|
||||||||| |||| |||||||||||| ||||||||||| || || ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23620216 |
gagatggcaaggctcaacttgaggaacaaactcttcgatatgaccagcttttggatgaaattgctgcgtttaaatccaagcttgaggcctttcgacaaga |
23620315 |
T |
|
| Q |
115 |
aacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttg |
214 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23620316 |
aacccctctaatccaatctcaagtagcagacattgactcatcaattgcctagtacaaggccaaaattgagcagttagaggaccaaaaagcccaacttttg |
23620415 |
T |
|
| Q |
215 |
gctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtactcct |
302 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
23620416 |
gctaaagaaggtctaatgaagtcagaggctcaaattgccatccagaaaatcaaggaatcgaaatcttcccagcaggaaatagtactcct |
23620504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 22644727 - 22644443
Alignment:
| Q |
14 |
agagatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaag |
113 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22644727 |
agagatggcagggctaaacttgaggaacagactctttgatatgatcagcttttagatgagattgctgcgtttaaatccaagcttgaagcctttcgacaag |
22644628 |
T |
|
| Q |
114 |
aaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaactttt |
213 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
22644627 |
aaacccctctaatccaatctcaagtggcag--attgactcatcaattgcccagtataaggccaaaattgagcagttagagggtctgaaagcccaactttt |
22644530 |
T |
|
| Q |
214 |
ggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtact |
299 |
Q |
| |
|
||||| ||| ||| ||||||| ||||||||| ||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
22644529 |
ggctagagagggtataatgaagtcagaggcttaaattgccatccagaagatcaaggaatcgaaatcttcccagcaggaaatagtact |
22644443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 24922833 - 24922673
Alignment:
| Q |
90 |
ccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagtt |
189 |
Q |
| |
|
||||||| || ||||||||||||||||| | | | || ||||| ||||||||||| ||||| ||||| |||||||| |||| ||| ||||| || ||||| |
|
|
| T |
24922833 |
ccaagctcgaagcctttcgacaagaaactcctgttattcaatcccaagtggcagagattgattcatcgattgcccaatatagggcgaaaatcgaacagtt |
24922734 |
T |
|
| Q |
190 |
agaggatcaaaaagcccaacttttggct-aaagaaggtctaatgaaatcagaggctcaaat |
249 |
Q |
| |
|
||| |||| ||| ||||||||||||| |||||||| || |||||||||||||||||||| |
|
|
| T |
24922733 |
ggagaatcagaaaaaccaacttttggctaaaagaaggcctcatgaaatcagaggctcaaat |
24922673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 281
Target Start/End: Complemental strand, 24956077 - 24955831
Alignment:
| Q |
35 |
gaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctc |
134 |
Q |
| |
|
||||||| |||| ||||||| ||||| || || |||||||||||||| || ||| |||| || || ||||||||||| ||||| | ||| || ||||| | |
|
|
| T |
24956077 |
gaggaacagacttttcgatatgatcagctgttggatgagattgctgccttcaaaaccaaactggaagcctttcgacaggaaactcctcttattcaatccc |
24955978 |
T |
|
| Q |
135 |
aagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaa |
234 |
Q |
| |
|
|| | || || ||||| | || ||||| || ||||| |||||||| || ||||| |||| |||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
24955977 |
aaattgcggatattgatttgtcgattgctcaatataaagccaaaatcgaacagttggagggccaaaaagcccaacttttggcaaaagagggtataatgaa |
24955878 |
T |
|
| Q |
235 |
atcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|| ||||| || ||||| || | ||||| || |||||||| |||| |
|
|
| T |
24955877 |
gtctgaggcccagattgccataaaaaagattaaagaatcgaagtctt |
24955831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 40323 - 40059
Alignment:
| Q |
17 |
gatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaa |
116 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
40323 |
gatggcagggctaggcttgaggaacgaactcttcgatatgatcagcttttagatgagattgctgcgttgaaatccaagcttgaggcttttcgacaagaaa |
40224 |
T |
|
| Q |
117 |
cccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggc |
216 |
Q |
| |
|
||| ||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40223 |
cccctctcatccaatcacaagtggcagatattgactcatcaatttcccagtataaggccaaaatcgagcagttagagggtcaaaaagcccaacttttggc |
40124 |
T |
|
| Q |
217 |
taaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
40123 |
taaagaaggtctaatgaagtcagaggctcaaattgccatccagaagatcaaagaatcgaaatctt |
40059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 36757 - 36522
Alignment:
| Q |
17 |
gatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaa |
116 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
36757 |
gatggcagggctaagcttgaggaacgaactcttcgatatgatcagcttttggatgagattgctgcatttaaatccaagcttgaggcttttcgacaagaaa |
36658 |
T |
|
| Q |
117 |
cccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggc |
216 |
Q |
| |
|
||| ||| |||||||| || |||||||| ||||||||||| ||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36657 |
cccctctcatccaatcacaggtggcagatattgactcatcaatttcccagtacaaggccaaaatcgagcagttagagggtcaaaaagcccaacttttggc |
36558 |
T |
|
| Q |
217 |
taaagaaggtctaatgaaatcagaggctcaaattgc |
252 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36557 |
taaagaaggtctaatgaagtcagaggctcaaattgc |
36522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 281
Target Start/End: Original strand, 31415 - 31679
Alignment:
| Q |
17 |
gatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaa |
116 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31415 |
gatggcagggctaggcttgaggaacgaactcttcgatatgatcagcttttagatgagattgctgcgttgaaatccaagcttgaggcttttcgacaagaaa |
31514 |
T |
|
| Q |
117 |
cccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggc |
216 |
Q |
| |
|
||| ||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31515 |
cccctctcatccaatcacaagtggcagatattgactcatcaatttcccagtataaggccaaaatcgagcagttagagggtcaaaaagcccaacttttggc |
31614 |
T |
|
| Q |
217 |
taaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
31615 |
taaagaaggtctaatgaagtcagaggctcaaattgccatccagaagatcaaagaatcgaaatctt |
31679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 156; Significance: 7e-83; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 28 - 302
Target Start/End: Complemental strand, 10167230 - 10166955
Alignment:
| Q |
28 |
taaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatc |
127 |
Q |
| |
|
||||||||| |||| || |||||||| ||||| ||||| ||||| ||||||| || ||| ||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
10167230 |
taaacttgaagaacaaacccttcgatatgatcagcttttggatgaaattgctgaattcaaaaccaagctcgaggcttttcgacaagaaacccctctaatc |
10167131 |
T |
|
| Q |
128 |
caatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtc |
227 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
10167130 |
caatctcaagtggcagacattgattcatcaattacccagtataaggccaaaattgagcagttagaggatcagaaggcccaacttttggctaaagaaggtt |
10167031 |
T |
|
| Q |
228 |
taatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtactcct |
302 |
Q |
| |
|
||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
10167030 |
taatgaagtcagaggctcaaattgccatcaagaagatcaaggaatcgaaatcttcccagcaagaaatagtactcct |
10166955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 281
Target Start/End: Complemental strand, 10788532 - 10788294
Alignment:
| Q |
43 |
gactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggca |
142 |
Q |
| |
|
|||||||||||| ||||| || || |||||| ||||||| || || ||||| || || ||||||||||||||||| | || || ||||| ||||| || |
|
|
| T |
10788532 |
gactcttcgatatgatcagctgttggatgaggttgctgccttcaagtccaaactggaagcctttcgacaagaaactcccctcattcaatcccaagtagct |
10788433 |
T |
|
| Q |
143 |
gacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagagg |
242 |
Q |
| |
|
|||||||| || || ||||| || ||||| || ||||| || ||| | |||| ||||||| ||||||| ||||| ||||||||| ||||||| | |||| |
|
|
| T |
10788432 |
gacattgattcgtcgattgctcaatataaagctaaaatcgaacagctggagggtcaaaaaacccaactcttggccaaagaaggtgtaatgaagtatgagg |
10788333 |
T |
|
| Q |
243 |
ctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
| || |||||||| |||||||||| |||||||| |||| |
|
|
| T |
10788332 |
cccagattgctatcaagaagatcaaagaatcgaagtctt |
10788294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 281
Target Start/End: Original strand, 14687256 - 14687502
Alignment:
| Q |
35 |
gaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctc |
134 |
Q |
| |
|
||||||| ||| ||||||| ||||| || || |||||||||||||| || |||||||| || || ||||||||||||||||| | ||| || ||||| | |
|
|
| T |
14687256 |
gaggaacaaacttttcgatatgatcagctgttggatgagattgctgccttcaaatccaaactggaagcctttcgacaagaaactcctcttattcaatccc |
14687355 |
T |
|
| Q |
135 |
aagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaa |
234 |
Q |
| |
|
|||| || || ||||| || || ||||| || ||||| || ||||| || ||| | |||| |||||||||||||||||||| ||||| ||| | ||||| |
|
|
| T |
14687356 |
aagtagcggatattgattcgtcgattgctcaatataaagctaaaatcgaacagctggagggccaaaaagcccaacttttggccaaagagggtatgatgaa |
14687455 |
T |
|
| Q |
235 |
atcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|| ||||| |||||||| || | ||||| || |||||||| |||| |
|
|
| T |
14687456 |
gtccgaggcccaaattgccatcaaaaagattaaagaatcgaagtctt |
14687502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 281
Target Start/End: Original strand, 7345548 - 7345794
Alignment:
| Q |
35 |
gaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctc |
134 |
Q |
| |
|
||||||| ||| ||||||| ||||| || || |||||||||||||| || ||| |||| || || ||||||||||| ||||| | ||| || ||||| | |
|
|
| T |
7345548 |
gaggaacatacttttcgatatgatcagctgttggatgagattgctgccttcaaaaccaaactggaagcctttcgacaggaaactcctcttattcaatccc |
7345647 |
T |
|
| Q |
135 |
aagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaa |
234 |
Q |
| |
|
|| | | || ||||| | || ||||| || ||||| |||||||| || ||||| |||| |||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
7345648 |
aaatttcggatattgatttgtcgattgctcaatataaagccaaaatcgaacagttggagggccaaaaagcccaacttttggcaaaagagggtataatgaa |
7345747 |
T |
|
| Q |
235 |
atcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|| ||||| || ||||| ||| | ||||| || |||||||| |||| |
|
|
| T |
7345748 |
gtctgaggcccagattgccattaaaaagattaaagaatcgaagtctt |
7345794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 12493944 - 12493826
Alignment:
| Q |
134 |
caagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatga |
233 |
Q |
| |
|
||||||||||| ||||| ||||| |||||| |||| ||||| |||| ||||| || ||| |||||||| ||||||||||||||| |||| || |||| |
|
|
| T |
12493944 |
caagtggcagagattgattcatctattgccaagtacaaggcagaaatcgagcaattggagaatcaaaaaatccaacttttggctaaggaagacctcatga |
12493845 |
T |
|
| Q |
234 |
aatcagaggctcaaattgc |
252 |
Q |
| |
|
|| ||||||||| ||||| |
|
|
| T |
12493844 |
aacaagaggctcagattgc |
12493826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 13281263 - 13281538
Alignment:
| Q |
28 |
taaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatc |
127 |
Q |
| |
|
||||||||| |||| || |||||||| ||||| || || ||||| ||||||| || ||| ||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
13281263 |
taaacttgaagaacaaacccttcgatatgatcaactcttggatgaaattgctgaattcaaaaccaagctcgaggcttttcgacaagaaacccctctaatc |
13281362 |
T |
|
| Q |
128 |
caatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtc |
227 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13281363 |
caatctcaagtggcagacattgactcatcaatttcccaatataagcccaaaattgagcagttagaggatcaaaaagcccaactcctggctaaagaaggtt |
13281462 |
T |
|
| Q |
228 |
taatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtactcct |
302 |
Q |
| |
|
||||||| ||||| ||||||||||| || |||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
13281463 |
taatgaagtcagaagctcaaattgccatcaagaagatcaaggaatcgaaatcttcccagcaggaaatagcactcct |
13281538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 281
Target Start/End: Original strand, 14560993 - 14561246
Alignment:
| Q |
28 |
taaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatc |
127 |
Q |
| |
|
||||||||| |||| || |||||||| || || || || ||||| ||||||| || ||| ||||||| ||||| ||||| ||||| |||| | ||||| |
|
|
| T |
14560993 |
taaacttgaagaacaaacccttcgatatgaccaactcttggatgaaattgctgaattcaaaaccaagctcgaggcttttcgtcaagagacccctttaatc |
14561092 |
T |
|
| Q |
128 |
caatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtc |
227 |
Q |
| |
|
|||||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
14561093 |
caatctcaagtggcggatattgactcatcaattgcccaatataaggccaaaattgagcagttagaggatcagaaagcccaacttctggctaaagaaggct |
14561192 |
T |
|
| Q |
228 |
taatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||| ||||||||||| || || || |||||||||||||||||||||||| |
|
|
| T |
14561193 |
taatgaagtcagaggctcagatcgccatcaagaagatcaaggaatcgaaatctt |
14561246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 49 - 278
Target Start/End: Original strand, 14740750 - 14740979
Alignment:
| Q |
49 |
tcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacatt |
148 |
Q |
| |
|
|||||| || || ||||| ||||| ||||||| || ||| |||||||||||||||| ||||||||||||| | | |||||||| ||||||||||| || |
|
|
| T |
14740750 |
tcgatatgaccagcttttggatgaaattgctgaattcaaagccaagcttgaggccttccgacaagaaacccctgtgatccaatcccaagtggcagagatc |
14740849 |
T |
|
| Q |
149 |
gactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaa |
248 |
Q |
| |
|
||||| || ||| |||| ||||||| ||||| || | ||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14740850 |
gactcgtcgattacccaatataaggtgaaaatcgaactgttggagaatcagaaagcccaacttttggctaaagaaggtctcatgaaatcagaggctcaaa |
14740949 |
T |
|
| Q |
249 |
ttgctattcagaagatcaaggaatcgaaat |
278 |
Q |
| |
|
|||| || |||||||||| |||||||||| |
|
|
| T |
14740950 |
ttgccatcaagaagatcaaagaatcgaaat |
14740979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 28 - 281
Target Start/End: Original strand, 11046 - 11299
Alignment:
| Q |
28 |
taaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatc |
127 |
Q |
| |
|
||||||||| |||| || |||| ||| ||||| || || ||||| ||||||| || ||| ||||||| ||||| ||||| ||||| |||| ||||||| |
|
|
| T |
11046 |
taaacttgacgaacaaacccttcaatatgatcaactcttggatgaaattgctgaattcaaaaccaagctcgaggcttttcgtcaagagacccctctaatc |
11145 |
T |
|
| Q |
128 |
caatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtc |
227 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
11146 |
caatctcaagtggcggacattgactcatcaattgcccaatataaggccaaaattgagcagttagaggatcagaaagcccaacttctggctaaagaaggtt |
11245 |
T |
|
| Q |
228 |
taatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||| ||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
11246 |
taatgaagtcagaggctcaaattgccatcaagaagatcaaggaatcgaaatctt |
11299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 16915 - 17050
Alignment:
| Q |
146 |
attgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctc |
245 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| |||||||||| |
|
|
| T |
16915 |
attgactcatcaattgcccaatataaggccaaaattgagcagttagaggatcagaaagcccaacttctggctaaagaaggtttaatgaagtcagaggctc |
17014 |
T |
|
| Q |
246 |
aaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||| || |||||||||||||||||||||||| |
|
|
| T |
17015 |
aaattgccatcaagaagatcaaggaatcgaaatctt |
17050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 16 - 281
Target Start/End: Original strand, 19028887 - 19029152
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| |||||||||||| |||| || |||||||| ||||| ||||| ||||||||||||| || ||| | |||||||||||| ||||||||||| |
|
|
| T |
19028887 |
agatggcaaggctaaacttgaagaacaaacccttcgatatgatcagcttttggatgagattgctgatttcaaaactaagcttgaggcccttcgacaagaa |
19028986 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|||| | | |||||||||||||||||||| ||||| || || ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19028987 |
acccctgtgatccaatctcaagtggcagaaattgattcctcgattgcccgatataaggcgaaaattgagcagttagaggatcagaaagcccaacttttgg |
19029086 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||||||| | ||||| ||||||||||||||||| || |||||||||||||||| ||||||| |
|
|
| T |
19029087 |
ctaaagaaggtttcatgaagtcagaggctcaaattgccatcaagaagatcaaggaatcaaaatctt |
19029152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 16314399 - 16314553
Alignment:
| Q |
68 |
gatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagt |
167 |
Q |
| |
|
|||||||||||||| || |||||||| || || ||||||||||| ||||| | ||| || ||||| ||||| || || ||||| | || ||||| || | |
|
|
| T |
16314399 |
gatgagattgctgccttcaaatccaaactggaagcctttcgacaggaaactcctcttattcaatcccaagtagcggatattgatttgtcgattgctcaat |
16314498 |
T |
|
| Q |
168 |
ataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaaga |
222 |
Q |
| |
|
|||| |||||||| || ||||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
16314499 |
ataaagccaaaatcgaacagttggagggccaaaaagcccaacttttggcaaaaga |
16314553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 28 - 281
Target Start/End: Complemental strand, 37398 - 37141
Alignment:
| Q |
28 |
taaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatc |
127 |
Q |
| |
|
||||||||| |||| ||||||||||| ||| | ||||| ||||| ||||||| || ||| ||||||| ||||| |||||||||||||||| ||| ||| |
|
|
| T |
37398 |
taaacttgaagaacaaactcttcgatatgattagcttttggatgaaattgctgaattcaaaaccaagctcgaggcttttcgacaagaaacccctctgatc |
37299 |
T |
|
| Q |
128 |
caatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagca----gttagaggatcaaaaagcccaacttttggctaaagaa |
223 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
37298 |
caatctcaagtggcagacattgacttatcaattgcccagtataaggccaaaattgagtagtacgttagaggatcagaaagccgaacttttggctaaagaa |
37199 |
T |
|
| Q |
224 |
ggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||| ||||||| ||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
37198 |
ggtttaatgaagtcagaggctcaaattgccatcaagaagatcaaggaatcgaaatctt |
37141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 281
Target Start/End: Complemental strand, 14971 - 14718
Alignment:
| Q |
28 |
taaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatc |
127 |
Q |
| |
|
||||||||| |||| ||| |||||||| || || || || ||||| ||||| | || ||| ||||||| ||||| ||||| ||||| |||| | ||||| |
|
|
| T |
14971 |
taaacttgaagaacagacccttcgatatgaccaactcttggatgaaattgccgaattcaaaaccaagctcgaggcttttcgtcaagagacccctttaatc |
14872 |
T |
|
| Q |
128 |
caatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtc |
227 |
Q |
| |
|
|||||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
14871 |
caatctcaagtggcggatattgactcatcaattgcccaatataaggccaaaattgagcagttagaggatcagaaagcccaacttctggctaaagaaggtt |
14772 |
T |
|
| Q |
228 |
taatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||| ||||||||||||||||| || | |||||||| ||||||||||||| |
|
|
| T |
14771 |
taatgaagtcagaggctcaaattgccatcaataagatcaatgaatcgaaatctt |
14718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 281
Target Start/End: Original strand, 30800 - 31065
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| |||||||||||| |||| || ||||||| ||||| ||||| ||||| ||||| | || ||| ||||||||||||| |||||||||||| |
|
|
| T |
30800 |
agatggcaaggctaaacttgaagaacaaaccattcgatatgatcagcttttggatgaaattgccgaattcaaagccaagcttgaggcttttcgacaagaa |
30899 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|||| ||| |||||||| ||||||||||| ||||| || || ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30900 |
acccctctgatccaatcccaagtggcagagattgattcgtcgattgccctatataaggtaaaaattgagcagttagagggtcaaaaagcccaacttttgg |
30999 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||||||| | |||| |||||||| ||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
31000 |
ctaaagaaggtttcatgaggtcagaggcccaaattgctatcaaaaagatcaaagaatcgaaatctt |
31065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0081 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0081
Description:
Target: scaffold0081; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 281
Target Start/End: Original strand, 48287 - 48552
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| ||||||| |||| |||| || ||||||| ||||| ||||| ||||| ||||| | || ||| ||||||||||||| |||||||||||| |
|
|
| T |
48287 |
agatggcaaggctaaaattgaagaacaaaccattcgatatgatcagcttttggatgaaattgccgaattcaaagccaagcttgaggcttttcgacaagaa |
48386 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|||| ||| |||||||| ||||||||||| ||||| || || |||||||||||||||| ||||||||||||||| ||| ||| |||||||||||||||| |
|
|
| T |
48387 |
acccctctgatccaatcccaagtggcagagattgattcgtcaattgcccagtataaggtaaaaattgagcagttaaagggtcagaaagcccaacttttgg |
48486 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||||||| | ||||| |||||||| ||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
48487 |
ctaaagaaggtttcatgaagtcagaggcccaaattgctatcaaaaagatcaaagaatcgaaatctt |
48552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 21159 - 20895
Alignment:
| Q |
17 |
gatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaa |
116 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||||| || || ||||| ||||| ||||||| || ||| ||||||||||||| ||||||||||||| |
|
|
| T |
21159 |
gatggcaaggctaaacttgaggaacaaaccattcgatatgaccagcttttggatgaaattgctgaattcaaagccaagcttgaggcttttcgacaagaaa |
21060 |
T |
|
| Q |
117 |
cccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggc |
216 |
Q |
| |
|
||| | | |||||||| ||||||||||| ||||| ||||| |||||||| ||||||| |||||||||||||| || | ||| ||||||||| ||||||| |
|
|
| T |
21059 |
cccctgtgatccaatcccaagtggcagagattgattcatcgattgcccaatataaggtaaaaattgagcagttggaaggtcagaaagcccaatttttggc |
20960 |
T |
|
| Q |
217 |
taaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||| ||| | |||||||||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
20959 |
taaagagggtttcatgaaatcagaggcccaaattgctatcaagaagatcaaagaatcgaaatctt |
20895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 16 - 281
Target Start/End: Complemental strand, 75798 - 75533
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| | ||||||||||||||| || |||||||| ||||| ||| | |||||||||||||| || ||||||||||| || ||||||||||||||| |
|
|
| T |
75798 |
agatggcaagtctaaacttgaggaacaaacccttcgatatgatcagcttctggatgagattgctgcatttaaatccaagctggaagcctttcgacaagaa |
75699 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|| | ||| || |||||||| ||||| || |||||||| || ||| |||| |||||||| ||||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
75698 |
actcctctcattcaatctcaggtggcggatattgactcgtcaattacccaatataaggctaaaatcgagcagctagagggtcaaaaagcccaacttttgg |
75599 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||| ||| ||||||| |||||||| ||||| | || |||||||| ||||||||||| |||| |
|
|
| T |
75598 |
ctaaagagggtataatgaagtcagaggcctaaatttccatccagaagattaaggaatcgaagtctt |
75533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 16 - 281
Target Start/End: Original strand, 119147 - 119412
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| |||||||||||| |||| || ||||||| ||||| ||||| ||||| ||||||| || ||| ||||||||||||| ||| |||||||| |
|
|
| T |
119147 |
agatggcaaggctaaacttgaagaacaaaccattcgatatgatcagcttttggatgaaattgctgaattcaaagccaagcttgaggctttttgacaagaa |
119246 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|||| | | |||||||| ||||||||||| ||||| || || |||||||| ||||| | ||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
119247 |
acccctgtgatccaatcccaagtggcagagattgattcgtcgattgcccaatataaagtaaaaattgagcagttagagggtcagaaagcccaacttttgg |
119346 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||||||| | ||||| |||||||| ||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
119347 |
ctaaagaaggtttcatgaagtcagaggcccaaattgctatcaagaagatcaaaggatcgaaatctt |
119412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 386110 - 385891
Alignment:
| Q |
62 |
ctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattg |
161 |
Q |
| |
|
||||| ||||| ||| ||| ||| ||| ||||||| |||||||||| ||||||||| | | | || ||||| ||||||||||| || || ||||| |||| |
|
|
| T |
386110 |
cttttggatgaaattactgagttcaaagccaagctagaggcctttccacaagaaactcctgttattcaatcccaagtggcagagatcgattcatcgattg |
386011 |
T |
|
| Q |
162 |
cccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaa |
261 |
Q |
| |
|
|||| |||| ||| ||||| || || || ||| |||| ||| |||||||||||||||||||||| || |||||| ||||||||| ||||| || |||| |
|
|
| T |
386010 |
cccaatatagggcgaaaatcgaacaattggagaatcagaaaacccaacttttggctaaagaaggcctcatgaaactagaggctcagattgccatcaagaa |
385911 |
T |
|
| Q |
262 |
gatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|| || || |||||||||| |
|
|
| T |
385910 |
aattaaagagtcgaaatctt |
385891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 70585 - 70321
Alignment:
| Q |
17 |
gatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaa |
116 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||||| | || ||||| ||||| ||||| | || ||| |||||||| |||||||||||||||||| |
|
|
| T |
70585 |
gatggcaaggctaaacttgaggaacaaaccattcgatataaccagcttttggatgaaattgcagaattcaaagccaagcttaaggcctttcgacaagaaa |
70486 |
T |
|
| Q |
117 |
cccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggc |
216 |
Q |
| |
|
||| | | |||||||| ||||||||||| ||||| ||||| |||||||| ||||||| ||||||| |||||| |||| ||| ||||||||||||||||| |
|
|
| T |
70485 |
cccctgtgatccaatcccaagtggcagagattgattcatcgattgcccaatataaggtaaaaattgggcagttggagggtcagaaagcccaacttttggc |
70386 |
T |
|
| Q |
217 |
taaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||||||| | |||||||||||| | ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
70385 |
taaagaaggtttcatgaaatcagagacccaaattgctatcaagaagatcaaagaatcgaaatctt |
70321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 79763 - 79499
Alignment:
| Q |
17 |
gatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaa |
116 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||||| | || ||||| ||||| ||||| | || ||| |||||||| |||||||||||||||||| |
|
|
| T |
79763 |
gatggcaaggctaaacttgaggaacaaaccattcgatataaccagcttttggatgaaattgcagaattcaaagccaagcttaaggcctttcgacaagaaa |
79664 |
T |
|
| Q |
117 |
cccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggc |
216 |
Q |
| |
|
||| | | |||||||| ||||||||||| ||||| ||||| |||||||| ||||||| ||||||| |||||| |||| ||| ||||||||||||||||| |
|
|
| T |
79663 |
cccctgtgatccaatcccaagtggcagagattgattcatcgattgcccaatataaggtaaaaattgggcagttggagggtcagaaagcccaacttttggc |
79564 |
T |
|
| Q |
217 |
taaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||||||| | |||||||||||| | ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
79563 |
taaagaaggtttcatgaaatcagagacccaaattgctatcaagaagatcaaagaatcgaaatctt |
79499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 273
Target Start/End: Complemental strand, 9476 - 9259
Alignment:
| Q |
56 |
gatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcat |
155 |
Q |
| |
|
||||| ||||| ||||| ||| ||| || ||| ||||||| |||||||||||||||||||| | | || ||||||||||||||||| ||||| |||| |
|
|
| T |
9476 |
gatcaacttttggatgaaattactgaattcaaagccaagctggaggcctttcgacaagaaactcccgttattcaatctcaagtggcagagattgattcat |
9377 |
T |
|
| Q |
156 |
ccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgctat |
255 |
Q |
| |
|
| |||||| | || | | |||||| |||| || ||| |||| ||| |||||||||||||||||||||| || |||||| ||| ||||| ||||| || |
|
|
| T |
9376 |
cgattgccaaatacagagtgaaaattaagcaattggagaatcagaaaacccaacttttggctaaagaaggcctcatgaaactagaagctcagattgccat |
9277 |
T |
|
| Q |
256 |
tcagaagatcaaggaatc |
273 |
Q |
| |
|
| |||||||| ||||| |
|
|
| T |
9276 |
caaaaagatcaaagaatc |
9259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 281
Target Start/End: Complemental strand, 21516982 - 21516717
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| ||||||||| || |||| || ||||||| ||||| ||||| ||||| ||||| | || ||| ||||||| ||||| |||||||||||| |
|
|
| T |
21516982 |
agatggcaaggctaaactcgaagaacaaaccattcgatatgatcagcttttggatgaaattgccgaattcaaagccaagctagaggcttttcgacaagaa |
21516883 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|||| | | |||||||| ||||||||||| ||||| ||||| |||||||| ||||||| |||||||||||||| | || ||| |||||||||||||||| |
|
|
| T |
21516882 |
acccctgtgatccaatcccaagtggcagagattgattcatcgattgcccaatataaggtaaaaattgagcagttggtgggtcagaaagcccaacttttgg |
21516783 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||||||| | ||||| |||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
21516782 |
ctaaagaaggtttcatgaagtcagaggcccaaattgctatcaagaagatcaaagaatcgaaatctt |
21516717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 49 - 281
Target Start/End: Original strand, 943 - 1175
Alignment:
| Q |
49 |
tcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacatt |
148 |
Q |
| |
|
|||||| || || ||||| ||||| ||| ||| || ||| |||||||||||||||||||||||||||||| | |||||||| ||||||||||| || |
|
|
| T |
943 |
tcgatatgaccagcttttggatgaaatttctgaattcaaagccaagcttgaggcctttcgacaagaaacccccgtgatccaatcccaagtggcagagatc |
1042 |
T |
|
| Q |
149 |
gactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaa |
248 |
Q |
| |
|
||||| || |||||||| ||||||| ||||| || ||||| ||| || | ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1043 |
gactcgtcgattgcccaacataaggcgaaaatcgaacagttggagaattagaaagcccaacttttggctaaagaaggtctcatgaaatcagaggctcaaa |
1142 |
T |
|
| Q |
249 |
ttgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| |
|
|
| T |
1143 |
ttgccattcagaagatcaaagaatcgaaatctt |
1175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 104; Significance: 7e-52; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 22798588 - 22798806
Alignment:
| Q |
62 |
ctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattg |
161 |
Q |
| |
|
||||| ||||| ||||||| || ||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||| || ||||| || |||| |
|
|
| T |
22798588 |
cttttggatgaaattgctgaattcaaagtcaagcttgaggcctttcgacaagaaacccca-tgatccaatcccaagtgacagagatcgactcgtcgattg |
22798686 |
T |
|
| Q |
162 |
cccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaa |
261 |
Q |
| |
|
|||| |||||||| ||||| || ||||| ||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |
|
|
| T |
22798687 |
cccaatataaggcgaaaatcgaacagttggagaatcagaaagcccaacttttggctaaagaaggtctcatgaagtcagaggctcaaattgccattcagaa |
22798786 |
T |
|
| Q |
262 |
gatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
22798787 |
gatcaaagaatcgaaatctt |
22798806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 281
Target Start/End: Complemental strand, 22082523 - 22082258
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| | |||| |||||||||| ||| | ||||| ||||| | || || ||||||||||| || |||| |||||| || ||||||||||||||| |
|
|
| T |
22082523 |
agatggcaagtctaagcttgaggaacagaccttccgatatgatcagttgttggacgagattgctgcatttaaattcaagctggaagcctttcgacaagaa |
22082424 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|| | ||| |||||||||||||| || || ||||||| || ||||| || ||||| |||||||| |||||| | |||| ||||||||||| ||||||| |
|
|
| T |
22082423 |
actcctctcatccaatctcaagtagcggatattgacttgtcaattgctcaatataaagccaaaatcgagcagctggagggccaaaaagcccagcttttgg |
22082324 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
| ||||| ||| ||||||| |||||||| |||||||| || |||||||| |||||||||||||||| |
|
|
| T |
22082323 |
ccaaagagggtataatgaagtcagaggcccaaattgccatccagaagattaaggaatcgaaatctt |
22082258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 22688313 - 22688474
Alignment:
| Q |
92 |
aagcttgaggcctttcgacaagaaacccgt-ctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagtta |
190 |
Q |
| |
|
||||| |||||||||||||||||||| | | ||| || || | ||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
22688313 |
aagctggaggcctttcgacaagaaactcctgctattcaaaac-caagtggcagagattgattcatctattgcccagtacaaggcaaaaattgagcagttg |
22688411 |
T |
|
| Q |
191 |
gaggatc-aaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgc |
252 |
Q |
| |
|
||| ||| ||||| ||| ||| |||||||||||| || |||||| ||||||||| ||||| |
|
|
| T |
22688412 |
gagaatcaaaaaaatccagcttctggctaaagaagacctcatgaaacgagaggctcagattgc |
22688474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 281
Target Start/End: Original strand, 41374244 - 41374482
Alignment:
| Q |
43 |
gactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggca |
142 |
Q |
| |
|
||||||| |||| ||||| || || |||||| ||| ||| || | ||||| || || ||||||||||||||||| | || || ||||| ||||| || |
|
|
| T |
41374244 |
gactctttgatatgatcagctgttggatgaggttgttgccttcgagtccaaactggaagcctttcgacaagaaactcccctcattcaatcccaagtagct |
41374343 |
T |
|
| Q |
143 |
gacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagagg |
242 |
Q |
| |
|
|| ||||| || || ||||| || ||||| || ||||| || ||| | |||| ||||||||||||||| ||||| ||||| ||| ||||||| || |||| |
|
|
| T |
41374344 |
gatattgattcgtcgattgctcaatataaagctaaaatcgaacagctggagggtcaaaaagcccaactcttggccaaagagggtgtaatgaagtctgagg |
41374443 |
T |
|
| Q |
243 |
ctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
| || ||||| || ||||||| || |||||||| |||| |
|
|
| T |
41374444 |
cccagattgccatcaagaagattaaagaatcgaagtctt |
41374482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 21300241 - 21300123
Alignment:
| Q |
134 |
caagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatga |
233 |
Q |
| |
|
||||||||||| ||||| ||||| |||||| |||| |||| |||| ||||| || ||| || ||||| ||||||||||||||| |||| || |||| |
|
|
| T |
21300241 |
caagtggcagagattgattcatctattgccaagtacaaggtagaaatcgagcaattggagaataaaaaaatccaacttttggctaaggaagacctcatga |
21300142 |
T |
|
| Q |
234 |
aatcagaggctcaaattgc |
252 |
Q |
| |
|
|| ||||||||| ||||| |
|
|
| T |
21300141 |
aacaagaggctcagattgc |
21300123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0323 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0323
Description:
Target: scaffold0323; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 281
Target Start/End: Complemental strand, 578 - 326
Alignment:
| Q |
29 |
aaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatcc |
128 |
Q |
| |
|
|||||| |||||| || |||||||||||||| ||||| || ||||||||||| || |||| ||| | || ||||||||||||||||| | ||| |||| |
|
|
| T |
578 |
aaacttaaggaacaaacccttcgatacgatcagcttttggacgagattgctgcattccaatctaagatggaagcctttcgacaagaaactcctctcatcc |
479 |
T |
|
| Q |
129 |
aatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtct |
228 |
Q |
| |
|
|| |||| || || || |||||||| || |||||||| |||||||||||||| |||||| |||||| ||||||||| ||||||||||| ||||| ||| | |
|
|
| T |
478 |
aaactcaggtagctgatattgactcgtcaattgcccaatataaggccaaaatcgagcagctagagggtcaaaaagcacaacttttggccaaagagggtgt |
379 |
T |
|
| Q |
229 |
aatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|||||| || ||||| || ||||| || |||||||||||||||||||| |||| |
|
|
| T |
378 |
aatgaagtccgaggcccagattgccatccagaagatcaaggaatcgaagtctt |
326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 18163349 - 18163476
Alignment:
| Q |
14 |
agagatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaag |
113 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
18163349 |
agagatggcaaggctaaacttgaggaacggactcttcgatatgatcagcttttggatgagattgctgcgtttaaatccaagctcgaagcctttcgacaag |
18163448 |
T |
|
| Q |
114 |
aaacccgtctaatccaatctcaagtggc |
141 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
18163449 |
aaacccttctaatccaatctcaagtggc |
18163476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 141 - 299
Target Start/End: Original strand, 18165617 - 18165776
Alignment:
| Q |
141 |
cagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcaga |
240 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| || | ||||| |||| |
|
|
| T |
18165617 |
cagacattgactcatcaattgcccagcataaggccaaaattgagcagttagagggtcaaaaagccgaacttttggctagagagggaatcatgaagccaga |
18165716 |
T |
|
| Q |
241 |
ggctcaaattgctattcagaagatcaaggaatcgaaatctttcca-taggaaatagtact |
299 |
Q |
| |
|
|||||||||||| || | ||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
18165717 |
ggctcaaattgccatccggaagatcaaggaatcgaaatcttcccagcaggaaatagtact |
18165776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 281
Target Start/End: Original strand, 14327799 - 14328045
Alignment:
| Q |
35 |
gaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctc |
134 |
Q |
| |
|
||||||| |||| |||||| ||||| || || |||||||||||||| || |||||||| || || ||||||||||| ||||| | ||| || ||||| | |
|
|
| T |
14327799 |
gaggaacagacttctcgatatgatcagctgttggatgagattgctgccttcaaatccaaactggaagcctttcgacaggaaactcctcttattcaatccc |
14327898 |
T |
|
| Q |
135 |
aagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaa |
234 |
Q |
| |
|
|||| || || ||||| | || ||||| || ||||| |||||||| || ||||| |||| || ||||||||| |||| || ||||| ||| | ||||| |
|
|
| T |
14327899 |
aagtagcggatattgatttgtcgattgctcaatataaagccaaaatcgaacagttggagggccacaaagcccaattttttgcaaaagagggtatgatgaa |
14327998 |
T |
|
| Q |
235 |
atcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|| ||||| |||||||| || | ||||| || |||||||| |||| |
|
|
| T |
14327999 |
gtctgaggcccaaattgccataaaaaagattaaagaatcgaagtctt |
14328045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 126463 - 126652
Alignment:
| Q |
92 |
aagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttag |
191 |
Q |
| |
|
|||||||| ||||||||||||||||||| | || ||||| ||||||||||| || || ||||| |||||||| |||| || ||||| || ||||| | |
|
|
| T |
126463 |
aagcttgaagcctttcgacaagaaacccccgtgattcaatcccaagtggcagagatcgattcatcgattgcccaatatagggtgaaaatcgaacagttgg |
126562 |
T |
|
| Q |
192 |
aggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
|| |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| ||||| ||||||||||||| |
|
|
| T |
126563 |
agaatcagaaaacccaacttttggctaaagaaggtctcatgaaatcagaggctcaaattgccatcaagaaaatcaaagaatcgaaatctt |
126652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 281
Target Start/End: Original strand, 22337412 - 22337606
Alignment:
| Q |
86 |
aaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagc |
185 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | || ||||| ||||||||||| || || | || |||||||| ||||||| ||||| |||| |
|
|
| T |
22337412 |
aaatccaagcttgaggcctttcgacaagaaacccccgtgattcaatcccaagtggcagagatcgatttgtcgattgcccaatataaggtgaaaatcgagc |
22337511 |
T |
|
| Q |
186 |
agttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
||||||| ||| | || ||||||||||||| || |||||||| |||||||||||||||| | |||| || ||||||| || ||||||||||||| |
|
|
| T |
22337512 |
agttagaagattagaagtcccaacttttggcaaaggaaggtctcatgaaatcagaggctc-acttgccatcaagaagattaaagaatcgaaatctt |
22337606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 281
Target Start/End: Complemental strand, 1731345 - 1731107
Alignment:
| Q |
43 |
gactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggca |
142 |
Q |
| |
|
||||||| |||| ||||| || || |||||| ||| ||| || | ||||| || || ||||||||||||||||| | || || ||||| ||||| || |
|
|
| T |
1731345 |
gactctttgatatgatcagctgttggatgaggttgttgccttctagtccaaactggaagcctttcgacaagaaactcccctcattcaatcccaagtagct |
1731246 |
T |
|
| Q |
143 |
gacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagagg |
242 |
Q |
| |
|
|| ||||| || || ||||| || ||||| || ||||| || ||| | |||| ||||||||| ||||| ||||| ||||| ||| ||||||| || |||| |
|
|
| T |
1731245 |
gatattgattcgtcgattgctcaatataaagctaaaatcgaacagctggagggtcaaaaagctcaactcttggccaaagagggtgtaatgaagtctgagg |
1731146 |
T |
|
| Q |
243 |
ctcaaattgctattcagaagatcaaggaatcgaaatctt |
281 |
Q |
| |
|
| || ||||| || |||||||||| |||||||| |||| |
|
|
| T |
1731145 |
cccagattgccatcaagaagatcaaagaatcgaagtctt |
1731107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 25339 - 25103
Alignment:
| Q |
16 |
agatggcagggctaaacttgaggaacggactcttcgatacgatcatctttttgatgagattgctgcgttgaaatccaagcttgaggcctttcgacaagaa |
115 |
Q |
| |
|
|||||||| ||||||||| ||||||| || ||| || ||||||||||| ||||| ||| ||| ||| || ||||||| |||||||||||||||||| |
|
|
| T |
25339 |
agatggcaaggctaaactcgaggaacaaaccactcgctatgatcatcttttggatgatattactgagttcaaggccaagctagaggcctttcgacaagaa |
25240 |
T |
|
| Q |
116 |
acccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttgg |
215 |
Q |
| |
|
|| | | | || ||||| |||||||| || || || ||||| ||||| || |||| ||| ||||| || || || ||| |||| ||| | |||||||||| |
|
|
| T |
25239 |
actcctgtcattcaatcccaagtggccgagatcgattcatcgattgctcaatatagggcgaaaatcgaacaattggagaatcataaaactcaacttttgg |
25140 |
T |
|
| Q |
216 |
ctaaagaaggtctaatgaaatcagaggctcaaattgc |
252 |
Q |
| |
|
|||||||||| || |||||| | ||||||| ||||| |
|
|
| T |
25139 |
ctaaagaaggcctcatgaaactaaaggctcagattgc |
25103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 279
Target Start/End: Complemental strand, 59202 - 59013
Alignment:
| Q |
90 |
ccaagcttgaggcctttcgacaagaaacccgtctaatccaatctcaagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagtt |
189 |
Q |
| |
|
||||||| |||||||||||||||||||| | | || ||| | ||||||||||| ||||| ||||| |||||| |||| | || ||||| ||||| || |
|
|
| T |
59202 |
ccaagctggaggcctttcgacaagaaactcccgttattcaaacccaagtggcagagattgattcatcgattgccaagtacagggaaaaaatcgagcaatt |
59103 |
T |
|
| Q |
190 |
agaggatcaaaaagcccaacttttggctaaagaaggtctaatgaaatcagaggctcaaattgctattcagaagatcaaggaatcgaaatc |
279 |
Q |
| |
|
||| |||| ||| |||||||||||||||||||||| || |||||| ||| ||||| ||||| || | |||||||| ||||| ||||| |
|
|
| T |
59102 |
ggagaatcagaaaacccaacttttggctaaagaaggcctcatgaaactagaagctcagattgccataaaaaagatcaaagaatcaaaatc |
59013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2044
Description:
Target: scaffold2044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 159 - 41
Alignment:
| Q |
134 |
caagtggcagacattgactcatccattgcccagtataaggccaaaattgagcagttagaggatcaaaaagcccaacttttggctaaagaaggtctaatga |
233 |
Q |
| |
|
||||||||||| ||||| ||||| |||||| |||| |||| |||| ||||| || ||| || ||||| ||||||||||||||| |||| || |||| |
|
|
| T |
159 |
caagtggcagagattgattcatctattgccaagtacaaggtagaaatcgagcaattggagaataaaaaaatccaacttttggctaaggaagacctcatga |
60 |
T |
|
| Q |
234 |
aatcagaggctcaaattgc |
252 |
Q |
| |
|
|| ||||||||| ||||| |
|
|
| T |
59 |
aacaagaggctcagattgc |
41 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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