View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15476_high_3 (Length: 352)
Name: NF15476_high_3
Description: NF15476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15476_high_3 |
 |  |
|
| [»] scaffold0536 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 30 - 311
Target Start/End: Original strand, 48912127 - 48912408
Alignment:
| Q |
30 |
gtgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaac |
129 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
48912127 |
gtgagtgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccaatgtcatttttcggataaacaac |
48912226 |
T |
 |
| Q |
130 |
tttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaaga |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48912227 |
tttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagaatgacaatgaagaggagaaaga |
48912326 |
T |
 |
| Q |
230 |
aaaatggttgccaaaggggtttgaagagagaattatcggaaagaagaaggctatgattattaagggttgggctccacaggtt |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48912327 |
aaaatggttgccaaaggggtttgaagagagaattatcggaaagaagaaggctatgattattaagggttgggctccacaggtt |
48912408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 307
Target Start/End: Complemental strand, 48958498 - 48958264
Alignment:
| Q |
73 |
ataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaactttatgagattgcgtgcgggattgaagcatcgagtcacgaatt |
172 |
Q |
| |
|
||||||| ||| |||||||||||||||||||| |||| |||| || |||||||||||||||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
48958498 |
ataactcagtgttgtacatatgctttggaagcatatgttatttatctgataaacaactttatgagattgcgtgtgggatagaagcatcaggtcacgaatt |
48958399 |
T |
 |
| Q |
173 |
catatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggtttgaagagagaattatcggaaag |
272 |
Q |
| |
|
|||||||||||||||| |||||| ||| || | || | |||||||||||||| ||| |||||||| || || || |||||||||| || |||||| |
|
|
| T |
48958398 |
tgtatgggttgttcctgagaagaaagggaaagaagacgagagtgaagaggagaaaggaaagtggttgccgaaaggattcgaagagagaaacattggaaag |
48958299 |
T |
 |
| Q |
273 |
aagaaggctatgattattaagggttgggctccaca |
307 |
Q |
| |
|
||||| | | |||| |||| ||| ||||| ||||| |
|
|
| T |
48958298 |
aagaaaggtttgatcattagggggtgggccccaca |
48958264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 314
Target Start/End: Complemental strand, 48965725 - 48965442
Alignment:
| Q |
28 |
cagtgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaaca |
127 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || || || | | ||||||| ||| |||||||| |||||||||||| |||| || | ||||||||| |
|
|
| T |
48965725 |
cagtgagcgtgcaagagtgtttgagttggctcaattccaagcgacataactcagtgttgtacataagctttggaagcctctgtcgttatcaggataaaca |
48965626 |
T |
 |
| Q |
128 |
actttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaa |
227 |
Q |
| |
|
||||||||||||||||| | || ||||||||| |||| || || ||||||||| |||| || || ||| ||| |||| | |||||||||||| |
|
|
| T |
48965625 |
gctttatgagattgcgtgtgcaatagaagcatcgggtcatgattttatatgggttattccccttaataacgggaaagaggatgagagtgaagaggagaag |
48965526 |
T |
 |
| Q |
228 |
gaaaaatggttgccaaaggggtttgaagagagaattatcggaaagaagaaggctatgattattaagggttgggctccacaggttctg |
314 |
Q |
| |
|
|||| ||||| |||||||| || |||||||||| || ||| ||||||| | ||||||||| |||||||||||| ||||||||| |
|
|
| T |
48965525 |
caaaagtggttaccaaagggattcgaagagagaaacattgga---aagaagggtttgattattaggggttgggctccgcaggttctg |
48965442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 307
Target Start/End: Complemental strand, 48961567 - 48961413
Alignment:
| Q |
153 |
gaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggtttg |
252 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| || ||| ||| | | |||| | |||||||||||||| || |||||||| || || |||| |
|
|
| T |
48961567 |
gaagcatcgggtcacgaatttgtatgggttgttcctgagaaaaaagggaaagtggatgagagcgaagaggagaaagacaagtggttgccgaaaggatttg |
48961468 |
T |
 |
| Q |
253 |
aagagagaattatcggaaagaagaaggctatgattattaagggttgggctccaca |
307 |
Q |
| |
|
||||||||| || | ||||||||||| | |||| |||||||| ||||| ||||| |
|
|
| T |
48961467 |
aagagagaaacattgaaaagaagaagggtttgatcattaaggggtgggccccaca |
48961413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 259
Target Start/End: Complemental strand, 48951627 - 48951399
Alignment:
| Q |
31 |
tgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaact |
130 |
Q |
| |
|
|||||||||| ||| ||||| |||| | |||||||| ||||||||||| ||| | ||||| ||||||||| ||| | || | ||||| ||| | |
|
|
| T |
48951627 |
tgagcgtgcaaaagtatttgaattggttgaactcgaagcaagataactcagtgctttacattagctttggaacaatttgttacttcccagataagcaatt |
48951528 |
T |
 |
| Q |
131 |
ttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaa |
230 |
Q |
| |
|
||||||||||| ||| ||| |||| ||| || | ||||||||||||||||| || |||||||| ||| |||| | || | ||| |||||||| ||| |
|
|
| T |
48951527 |
gtatgagattgcaagcgcgatagaagaatcaggttatgaattcatatgggttgtcccagaaaagaaggggaaggagaacgagagtgatgaggagaaggaa |
48951428 |
T |
 |
| Q |
231 |
aaatggttgccaaaggggtttgaagagag |
259 |
Q |
| |
|
|||||||| || | || |||||||||||| |
|
|
| T |
48951427 |
aaatggttacccagggagtttgaagagag |
48951399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0536 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0536
Description:
Target: scaffold0536; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 6293 - 6570
Alignment:
| Q |
30 |
gtgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaac |
129 |
Q |
| |
|
||||| ||||| |||||| |||||||||| ||||||| | ||||||||| ||| |||||||||||||||||||| ||| | ||| |||||||||||| |
|
|
| T |
6293 |
gtgagtgtgcatgagtgtctgagttggctagactcgaagccagataactcagtgttgtacatatgctttggaagcttatgccttttcccggataaacaac |
6392 |
T |
 |
| Q |
130 |
tttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaaga |
229 |
Q |
| |
|
|||| |||||||| || ||||| ||||||||| ||||| |||||||||||||||||||||| |||||| ||| || |||| | |||||||||||||| |
|
|
| T |
6393 |
tttacgagattgcatgtgggatagaagcatcgggtcacaaattcatatgggttgttcctgagaagaaagggaaagaagatgagagtgaagaggagaaagg |
6492 |
T |
 |
| Q |
230 |
aaaatggttgccaaaggggtttgaagagagaattatcggaaagaagaaggctatgattattaagggttgggctccaca |
307 |
Q |
| |
|
|||||||||||||||||| || |||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
6493 |
aaaatggttgccaaagggattcgaagagagaaatatcggaaagaagaagggtttgattattaggggttgggctccaca |
6570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0536; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 311
Target Start/End: Original strand, 10277 - 10556
Alignment:
| Q |
30 |
gtgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaac |
129 |
Q |
| |
|
||||| ||||| |||||| ||||||||||||||| ||| | ||||| || ||| ||||||| ||||||||||||| |||| ||||||| |||||||||| |
|
|
| T |
10277 |
gtgagtgtgcatgagtgtctgagttggcttaacttgaagcgagata--tcagtgttgtacatttgctttggaagcctatgttatttttcagataaacaac |
10374 |
T |
 |
| Q |
130 |
tttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaaga |
229 |
Q |
| |
|
||||||||||||||||| || | ||||||||| || ||||||| |||| ||||||||||| |||||| ||| ||| |||| | | ||||||||||||| |
|
|
| T |
10375 |
tttatgagattgcgtgcagggtagaagcatcgggttacgaatttgtatgagttgttcctgagaagaaagggaaagagaatgagagtcaagaggagaaaga |
10474 |
T |
 |
| Q |
230 |
aaaatggttgccaaaggggtttgaagagagaattatcggaaagaagaaggctatgattattaagggttgggctccacaggtt |
311 |
Q |
| |
|
||||||| | || || || |||||||| ||| |||| | ||||||||||| | ||||||||||||||||||| || |||||| |
|
|
| T |
10475 |
aaaatggctaccgaaaggatttgaagaaagagttattgcaaagaagaagggtttgattattaagggttgggcccctcaggtt |
10556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 12589951 - 12590231
Alignment:
| Q |
30 |
gtgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaac |
129 |
Q |
| |
|
|||| |||||| |||||| |||||||||| |||||||| | ||||||||| ||| |||||||||||||||| ||| ||| |||| || |||||||||| |
|
|
| T |
12589951 |
gtgaacgtgcaagagtgtctgagttggctaaactcgaagcgagataactctgtgttgtacatatgctttgggagcatatgctatttctcagataaacaac |
12590050 |
T |
 |
| Q |
130 |
tttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaaga |
229 |
Q |
| |
|
||||||||||| |||| || || |||||||| | ||||||||| |||||||| |||| || || ||| ||| ||| |||| | ||| ||||| ||| | |
|
|
| T |
12590051 |
tttatgagatttcgtgtggcatagaagcatcaggccacgaattcgtatgggttattcccgagaaaaaagggaaggaagatgagagtgatgaggataaaca |
12590150 |
T |
 |
| Q |
230 |
aaaatggttgccaaaggggtttgaagagagaattatcg---gaaagaagaaggctatgattattaagggttgggctccaca |
307 |
Q |
| |
|
|||||||||||| | || ||||||||||||| || | |||||||||||| | |||| |||| ||||||||| ||||| |
|
|
| T |
12590151 |
aaaatggttgcctagtggatttgaagagagaaacattgggagaaagaagaagggtttgatcattaggggttgggccccaca |
12590231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 261
Target Start/End: Original strand, 12483246 - 12483477
Alignment:
| Q |
30 |
gtgagcgtgcacgagtgtttgagttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaac |
129 |
Q |
| |
|
||||||||||| |||||| |||||||| ||||| || ||||| || || ||| |||||||||||||||| |||| ||| |||| || |||||||| | |
|
|
| T |
12483246 |
gtgagcgtgcatgagtgtcaaagttggctaaactcaaagcaagaaaattcagtgttgtacatatgctttgggagcctatgcaatttctctgataaacagc |
12483345 |
T |
 |
| Q |
130 |
tttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaaga |
229 |
Q |
| |
|
|||| || ||| | ||||| || ||||||||| || | |||||||||||||||||||||| || ||| ||| ||| |||| | || ||||||||||| |
|
|
| T |
12483346 |
tttacgaaatttcatgcggaatagaagcatcgggtaaaaaattcatatgggttgttcctgagaaaaaagggaaggaagatgagagcgatgaggagaaaga |
12483445 |
T |
 |
| Q |
230 |
aaaatggttgccaaaggggtttgaagagagaa |
261 |
Q |
| |
|
||| |||||||| ||||| ||||| ||||||| |
|
|
| T |
12483446 |
aaagtggttgccgaagggatttgaggagagaa |
12483477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 261
Target Start/End: Complemental strand, 13440550 - 13440363
Alignment:
| Q |
74 |
taactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaactttatgagattgcgtgcgggattgaagcatcgagtcacgaattc |
173 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||| || ||||||||||| |||||||| ||||||| || |||||||| |||||| |||| |
|
|
| T |
13440550 |
taactcggtgttgtacatatgttttggaagcatcaactatttctctgataaacaactatatgagatggcgtgcgcaatagaagcatctagtcacccattc |
13440451 |
T |
 |
| Q |
174 |
atatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggtttgaagagagaa |
261 |
Q |
| |
|
||||||||||||||||| |||||| ||| || |||| | ||| || ||||||||||| |||||||||||||| || |||||||||| |
|
|
| T |
13440450 |
atatgggttgttcctgagaagaaagggaaagaagatgagagtgaggaagagaaagaaaagtggttgccaaagggattcgaagagagaa |
13440363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 311
Target Start/End: Complemental strand, 13448675 - 13448479
Alignment:
| Q |
112 |
atttttcggataaacaactttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatga |
211 |
Q |
| |
|
||||||| ||||||||||| || ||||| || || | ||| |||||||| ||||| ||||||||||||||||||||| |||||| ||| || |||| |
|
|
| T |
13448675 |
atttttctgataaacaactatacgagatggcatgtgcgatagaagcatccggtcacccattcatatgggttgttcctgagaagaaagggaaagaagatga |
13448576 |
T |
 |
| Q |
212 |
caatgaagaggagaaagaaaaatggttgccaaaggggtttgaagagagaattatcggaaagaagaaggctatgattattaagggttgggctccacaggtt |
311 |
Q |
| |
|
| ||||| ||||||||||| ||||| || ||||| ||||||||||||| |||||| |||||||| | |||| |||| ||||||||| ||||||||| |
|
|
| T |
13448575 |
gagcgaagaagagaaagaaaagtggttaccgaagggatttgaagagagaaatatcgg---gaagaagggtttgatcattaggggttgggccccacaggtt |
13448479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 13455087 - 13455000
Alignment:
| Q |
171 |
ttcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggtttgaagaga |
258 |
Q |
| |
|
||||||||||||||||| || |||||| ||| || |||| | |||||||||||| |||| |||||||| ||||| |||||||||| |
|
|
| T |
13455087 |
ttcatatgggttgttccggagaagaaagggaaagaagatgagagcgaagaggagaaacaaaagtggttgccgaagggatttgaagaga |
13455000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 52 - 275
Target Start/End: Original strand, 3417334 - 3417557
Alignment:
| Q |
52 |
gttggcttaactcgaaacaagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaactttatgagattgcgtgcgggat |
151 |
Q |
| |
|
||||||| ||||| |||||| |||||| ||| |||||||||| ||||||||| | |||| || ||||||||||| ||||||||||| | || || |
|
|
| T |
3417334 |
gttggctcaactcacaacaagttaactcagtgttgtacatatgttttggaagcttaaactatttctctgataaacaactatatgagattgcatacgcaat |
3417433 |
T |
 |
| Q |
152 |
tgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggttt |
251 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||| |||||| | | || |||| || ||||| ||||||||||| |||||||| ||||| ||| |
|
|
| T |
3417434 |
agaagcatcgggtcacccattcatatgggttgttcttgagaagaaaggaaaagaagatgagaacgaagaagagaaagaaaagtggttgccgaagggattt |
3417533 |
T |
 |
| Q |
252 |
gaagagagaattatcggaaagaag |
275 |
Q |
| |
|
|| ||||||| || ||||||||| |
|
|
| T |
3417534 |
gaggagagaaacattggaaagaag |
3417557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 28385684 - 28385483
Alignment:
| Q |
74 |
taactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaactttatgagattgcgtgcgggattgaagcatcgagtcacgaattc |
173 |
Q |
| |
|
|||||| || ||||||||||| ||||||||| | ||||| || ||||||||||| ||||||||||| |||| | |||||||| ||||| |||| |
|
|
| T |
28385684 |
taactcagttgtgtacatatgttttggaagcataaaccatttctctgataaacaactatatgagattgcatgcgcagtagaagcatcaggtcacccattc |
28385585 |
T |
 |
| Q |
174 |
atatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggtttgaagagagaattatcggaaaga |
273 |
Q |
| |
|
||||||||||||||||| |||||| ||| || |||| | ||||| ||||||||||| ||| |||||||||| ||||| ||||||| || ||||||| |
|
|
| T |
28385584 |
atatgggttgttcctgagaagaaagggaaagaagatgagatcgaagaagagaaagaaaagtggctgccaaagggatttgaggagagaaacattggaaaga |
28385485 |
T |
 |
| Q |
274 |
ag |
275 |
Q |
| |
|
|| |
|
|
| T |
28385484 |
ag |
28385483 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 261
Target Start/End: Complemental strand, 12541040 - 12540848
Alignment:
| Q |
69 |
caagataactcggtggtgtacatatgctttggaagccgatgtcatttttcggataaacaactttatgagattgcgtgcgggattgaagcatcgagtcacg |
168 |
Q |
| |
|
|||| |||||| |||||||||||||| ||||||||| | |||||| | || |||||||| ||||||||||| || | | |||| | | ||||| |
|
|
| T |
12541040 |
caagttaactcagtggtgtacatatgttttggaagcataaatcatttctttgacaaacaactatatgagattgcatgtgcagtagaaggaatgggtcacc |
12540941 |
T |
 |
| Q |
169 |
aattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaagaggagaaagaaaaatggttgccaaaggggtttgaagagagaa |
261 |
Q |
| |
|
||||||||||||||||||||| |||| | ||| || |||| | |||||| ||||||||||| ||| |||| ||||| ||||| ||||||| |
|
|
| T |
12540940 |
cattcatatgggttgttcctgagaagagagggaaagaagatgagactgaagaagagaaagaaaagtggatgccgaagggatttgaggagagaa |
12540848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 261
Target Start/End: Original strand, 12641353 - 12641494
Alignment:
| Q |
120 |
gataaacaactttatgagattgcgtgcgggattgaagcatcgagtcacgaattcatatgggttgttcctgaaaagaaacggacggagcatgacaatgaag |
219 |
Q |
| |
|
|||||||||||||| ||||||||| |||| || ||| || |||||||||| |||||||||||||||| |||||| ||| | |||| | ||||| |
|
|
| T |
12641353 |
gataaacaactttacgagattgcgagcggaatagaaaattcaggtcacgaatttgtatgggttgttcctgagaagaaagggaaaaaagatgagagtgaag |
12641452 |
T |
 |
| Q |
220 |
aggagaaagaaaaatggttgccaaaggggtttgaagagagaa |
261 |
Q |
| |
|
||||||||||||| |||||||| || || || |||||||||| |
|
|
| T |
12641453 |
aggagaaagaaaagtggttgcctaaaggattcgaagagagaa |
12641494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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