View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1547_low_32 (Length: 273)

Name: NF1547_low_32
Description: NF1547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1547_low_32
NF1547_low_32
[»] chr1 (36 HSPs)
chr1 (11-122)||(11660717-11660829)
chr1 (137-207)||(8764031-8764101)
chr1 (137-207)||(26325852-26325922)
chr1 (137-207)||(49078154-49078224)
chr1 (137-207)||(17642002-17642072)
chr1 (137-207)||(41663854-41663924)
chr1 (137-207)||(43959819-43959889)
chr1 (138-207)||(4581681-4581750)
chr1 (138-207)||(10422828-10422897)
chr1 (149-228)||(21849215-21849291)
chr1 (167-203)||(17092505-17092541)
chr1 (139-207)||(33004015-33004083)
chr1 (148-207)||(33418124-33418183)
chr1 (165-207)||(35908798-35908840)
chr1 (138-207)||(5855562-5855631)
chr1 (137-198)||(10507747-10507808)
chr1 (138-207)||(16956506-16956575)
chr1 (174-233)||(48798105-48798161)
chr1 (138-207)||(50503360-50503429)
chr1 (138-228)||(9659178-9659265)
chr1 (138-206)||(11397888-11397956)
chr1 (137-201)||(18915913-18915977)
chr1 (167-207)||(33498867-33498907)
chr1 (149-201)||(50094950-50095002)
chr1 (167-228)||(10336538-10336596)
chr1 (167-201)||(5504077-5504111)
chr1 (138-207)||(12036742-12036812)
chr1 (168-233)||(30927756-30927818)
chr1 (137-207)||(37339860-37339930)
chr1 (167-201)||(48761222-48761256)
chr1 (164-197)||(13262133-13262166)
chr1 (138-207)||(45361881-45361950)
chr1 (169-201)||(2980961-2980993)
chr1 (173-201)||(12150784-12150812)
chr1 (167-207)||(13265978-13266018)
chr1 (167-207)||(45726461-45726501)
[»] chr4 (34 HSPs)
chr4 (149-207)||(8064807-8064865)
chr4 (139-207)||(42722576-42722644)
chr4 (149-201)||(50485993-50486045)
chr4 (149-208)||(1940786-1940845)
chr4 (138-201)||(47078508-47078571)
chr4 (150-207)||(5472858-5472915)
chr4 (139-207)||(29895831-29895899)
chr4 (138-201)||(16450350-16450413)
chr4 (140-207)||(40780861-40780928)
chr4 (166-207)||(1446870-1446911)
chr4 (138-207)||(29588780-29588849)
chr4 (138-207)||(38166071-38166140)
chr4 (139-207)||(2559351-2559419)
chr4 (167-229)||(3507295-3507354)
chr4 (139-207)||(7246645-7246713)
chr4 (137-201)||(36262764-36262828)
chr4 (137-201)||(38168306-38168370)
chr4 (167-207)||(43458657-43458697)
chr4 (167-203)||(48317302-48317338)
chr4 (167-207)||(49260692-49260732)
chr4 (164-203)||(41339419-41339458)
chr4 (149-207)||(3159478-3159536)
chr4 (149-207)||(8889066-8889124)
chr4 (173-207)||(14567283-14567317)
chr4 (137-207)||(20128353-20128423)
chr4 (137-207)||(53599104-53599174)
chr4 (149-232)||(30317255-30317335)
chr4 (167-207)||(295560-295600)
chr4 (167-207)||(6779255-6779295)
chr4 (139-207)||(14124060-14124128)
chr4 (167-207)||(14597927-14597967)
chr4 (168-226)||(20354665-20354720)
chr4 (167-207)||(36145242-36145282)
chr4 (149-201)||(54946299-54946351)
[»] chr7 (29 HSPs)
chr7 (138-207)||(39474982-39475051)
chr7 (138-228)||(34659250-34659337)
chr7 (150-207)||(16802165-16802222)
chr7 (138-207)||(48804725-48804794)
chr7 (138-201)||(36619252-36619315)
chr7 (167-207)||(3353466-3353506)
chr7 (167-207)||(41945515-41945555)
chr7 (164-207)||(24983443-24983486)
chr7 (137-207)||(17748379-17748449)
chr7 (149-207)||(37514963-37515021)
chr7 (138-207)||(4195200-4195269)
chr7 (140-201)||(27875088-27875149)
chr7 (149-201)||(4705993-4706045)
chr7 (137-201)||(5069812-5069876)
chr7 (139-207)||(38578866-38578934)
chr7 (173-208)||(32823284-32823319)
chr7 (137-199)||(10047873-10047935)
chr7 (171-201)||(30827340-30827370)
chr7 (137-207)||(42210259-42210329)
chr7 (138-208)||(43346777-43346847)
chr7 (137-207)||(43861969-43862039)
chr7 (137-207)||(47341918-47341988)
chr7 (137-207)||(48244353-48244423)
chr7 (169-206)||(4973139-4973176)
chr7 (138-207)||(8734684-8734753)
chr7 (164-201)||(14535339-14535376)
chr7 (138-207)||(21190778-21190847)
chr7 (169-233)||(23658198-23658259)
chr7 (149-209)||(28396169-28396229)
[»] chr8 (13 HSPs)
chr8 (137-207)||(6100515-6100585)
chr8 (137-207)||(10927649-10927719)
chr8 (140-207)||(15884556-15884623)
chr8 (149-226)||(18374037-18374111)
chr8 (149-201)||(13357965-13358017)
chr8 (140-207)||(4479296-4479363)
chr8 (137-207)||(14666068-14666138)
chr8 (137-198)||(8803106-8803167)
chr8 (169-206)||(43027349-43027386)
chr8 (138-207)||(43032944-43033013)
chr8 (167-229)||(583836-583895)
chr8 (137-201)||(2964125-2964189)
chr8 (167-203)||(26570971-26571007)
[»] chr5 (34 HSPs)
chr5 (137-233)||(42086344-42086437)
chr5 (137-207)||(1538471-1538541)
chr5 (137-207)||(19572764-19572834)
chr5 (151-207)||(9168264-9168320)
chr5 (149-226)||(3653923-3653997)
chr5 (138-201)||(8513565-8513628)
chr5 (164-207)||(20525878-20525921)
chr5 (167-206)||(37263281-37263320)
chr5 (137-207)||(4016252-4016322)
chr5 (137-207)||(9805044-9805114)
chr5 (149-207)||(24463895-24463953)
chr5 (137-207)||(38897716-38897786)
chr5 (167-201)||(42291532-42291566)
chr5 (137-207)||(42861215-42861285)
chr5 (137-206)||(5079372-5079440)
chr5 (138-207)||(20682615-20682684)
chr5 (138-207)||(43399168-43399237)
chr5 (167-207)||(14588644-14588684)
chr5 (137-201)||(23247349-23247412)
chr5 (149-201)||(25452971-25453022)
chr5 (150-228)||(32874809-32874884)
chr5 (137-207)||(5731917-5731987)
chr5 (173-207)||(6764490-6764524)
chr5 (167-201)||(14974351-14974385)
chr5 (140-201)||(20223099-20223160)
chr5 (138-207)||(24653810-24653878)
chr5 (138-207)||(40117455-40117524)
chr5 (171-207)||(7336660-7336696)
chr5 (167-207)||(12081948-12081988)
chr5 (167-207)||(20255409-20255449)
chr5 (137-201)||(22655155-22655218)
chr5 (167-207)||(24875385-24875425)
chr5 (173-201)||(30995167-30995195)
chr5 (149-201)||(39099788-39099840)
[»] chr3 (41 HSPs)
chr3 (137-207)||(49021201-49021271)
chr3 (137-207)||(47749103-47749173)
chr3 (137-207)||(54237487-54237557)
chr3 (137-201)||(28572209-28572273)
chr3 (139-207)||(54261265-54261333)
chr3 (164-207)||(49198390-49198433)
chr3 (140-233)||(51682955-51683045)
chr3 (137-207)||(3136692-3136762)
chr3 (137-207)||(25294999-25295069)
chr3 (137-207)||(29127958-29128028)
chr3 (139-201)||(30767247-30767309)
chr3 (149-207)||(43330742-43330800)
chr3 (137-207)||(47219183-47219253)
chr3 (149-207)||(50405613-50405671)
chr3 (137-207)||(51060279-51060349)
chr3 (138-207)||(7648779-7648848)
chr3 (137-206)||(13893966-13894035)
chr3 (150-207)||(45402362-45402419)
chr3 (137-201)||(15320231-15320295)
chr3 (139-207)||(29762155-29762223)
chr3 (137-201)||(33251707-33251771)
chr3 (140-207)||(3507534-3507601)
chr3 (164-207)||(29135952-29135995)
chr3 (150-201)||(49543564-49543615)
chr3 (137-207)||(928639-928709)
chr3 (149-207)||(15795504-15795562)
chr3 (137-195)||(36043672-36043730)
chr3 (139-201)||(45877499-45877561)
chr3 (140-201)||(2029268-2029329)
chr3 (138-207)||(7328883-7328951)
chr3 (169-198)||(19873420-19873449)
chr3 (138-207)||(23511606-23511675)
chr3 (173-201)||(7310737-7310765)
chr3 (167-207)||(10040595-10040635)
chr3 (139-203)||(19147004-19147068)
chr3 (149-201)||(26207811-26207863)
chr3 (173-201)||(26362001-26362029)
chr3 (137-201)||(35998569-35998633)
chr3 (139-207)||(47471870-47471938)
chr3 (149-201)||(50753351-50753403)
chr3 (171-233)||(52364832-52364891)
[»] chr2 (40 HSPs)
chr2 (149-207)||(6358160-6358218)
chr2 (138-207)||(25540402-25540471)
chr2 (150-201)||(35946783-35946834)
chr2 (137-207)||(10823099-10823169)
chr2 (137-207)||(12455349-12455419)
chr2 (137-207)||(44945632-44945702)
chr2 (137-201)||(7747319-7747383)
chr2 (149-201)||(34738342-34738394)
chr2 (138-201)||(16325640-16325703)
chr2 (138-201)||(41031904-41031967)
chr2 (149-207)||(37560212-37560270)
chr2 (137-207)||(41220674-41220744)
chr2 (149-207)||(42770660-42770718)
chr2 (138-200)||(44139530-44139592)
chr2 (150-207)||(28525465-28525522)
chr2 (139-207)||(9360747-9360815)
chr2 (139-207)||(12864263-12864331)
chr2 (139-207)||(14169608-14169676)
chr2 (167-207)||(22593173-22593213)
chr2 (169-201)||(25549773-25549805)
chr2 (168-207)||(8410170-8410209)
chr2 (139-201)||(16813164-16813226)
chr2 (139-201)||(16852443-16852505)
chr2 (149-207)||(27725979-27726037)
chr2 (177-233)||(45263704-45263757)
chr2 (138-207)||(3643885-3643954)
chr2 (168-201)||(4120180-4120213)
chr2 (150-207)||(10026626-10026683)
chr2 (150-207)||(10046487-10046544)
chr2 (138-207)||(11069917-11069986)
chr2 (137-206)||(20116609-20116678)
chr2 (138-207)||(28616377-28616446)
chr2 (140-196)||(1773644-1773700)
chr2 (173-201)||(7787101-7787129)
chr2 (138-228)||(18902528-18902615)
chr2 (140-207)||(20612534-20612602)
chr2 (173-201)||(21180347-21180375)
chr2 (169-201)||(24179613-24179645)
chr2 (167-207)||(38962802-38962842)
chr2 (149-201)||(39201517-39201569)
[»] chr6 (23 HSPs)
chr6 (137-201)||(6606094-6606158)
chr6 (137-201)||(14783417-14783481)
chr6 (137-207)||(9633622-9633692)
chr6 (137-207)||(21898691-21898761)
chr6 (137-201)||(19089547-19089611)
chr6 (137-207)||(12635857-12635927)
chr6 (137-207)||(30788850-30788920)
chr6 (138-207)||(3601127-3601196)
chr6 (138-207)||(13036002-13036071)
chr6 (167-207)||(2271330-2271370)
chr6 (167-207)||(12606473-12606513)
chr6 (137-201)||(13468982-13469046)
chr6 (137-201)||(14107355-14107419)
chr6 (141-187)||(4596184-4596230)
chr6 (149-207)||(13391329-13391387)
chr6 (137-207)||(29444762-29444832)
chr6 (138-207)||(5253221-5253290)
chr6 (172-201)||(19230591-19230620)
chr6 (169-206)||(33940055-33940092)
chr6 (139-207)||(9366423-9366490)
chr6 (170-233)||(24671896-24671956)
chr6 (155-207)||(29333154-29333206)
chr6 (138-198)||(34954617-34954677)
[»] scaffold0006 (1 HSPs)
scaffold0006 (149-208)||(68555-68614)
[»] scaffold0010 (1 HSPs)
scaffold0010 (137-233)||(155708-155801)
[»] scaffold0170 (1 HSPs)
scaffold0170 (167-207)||(9887-9927)
[»] scaffold0086 (1 HSPs)
scaffold0086 (139-233)||(26202-26293)
[»] scaffold0011 (2 HSPs)
scaffold0011 (149-201)||(186565-186617)
scaffold0011 (139-198)||(224368-224427)
[»] scaffold0005 (2 HSPs)
scaffold0005 (173-207)||(250058-250092)
scaffold0005 (167-207)||(219411-219451)
[»] scaffold0316 (1 HSPs)
scaffold0316 (138-207)||(1612-1681)
[»] scaffold0291 (1 HSPs)
scaffold0291 (138-207)||(6897-6966)
[»] scaffold0384 (1 HSPs)
scaffold0384 (149-201)||(6020-6072)
[»] scaffold0209 (1 HSPs)
scaffold0209 (167-229)||(12596-12655)
[»] scaffold0029 (1 HSPs)
scaffold0029 (173-201)||(41092-41120)
[»] scaffold0009 (1 HSPs)
scaffold0009 (139-207)||(42831-42899)


Alignment Details
Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 11660829 - 11660717
Alignment:
Q  11 tgaacaaaatgattgatttgta--gttcttgcatatggtatcaatggtcaacatcaaaatatgtttaaacctctaa-aaaatggaaggaaatatgtttaa 107  Q
    |||||||||||||||||||||   ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11660829 tgaacaaaatgattgatttgttacgttcttgcat--ggtatcaatggtcaacatcaaaatatgtttaaacctctaaaaaaatggaaggaaatatgtttaa 11660732  T
Q  108 aatattgtaatttga 122  Q
    |||||||||||||||    
T  11660731 aatattgtaatttga 11660717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 8764101 - 8764031
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || ||||||||||||||||||||||||||||||||||| |||||    
T  8764101 ggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcac 8764031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 26325922 - 26325852
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || |||||||||||||||||||||||| ||||||||||||| |||||    
T  26325922 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 26325852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 49078224 - 49078154
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||| |||||    
T  49078224 ggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcac 49078154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 17642002 - 17642072
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||   |||| ||||| || || ||||||||||||||||||||||||||||||||||| |||||    
T  17642002 ggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 17642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 41663854 - 41663924
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || ||||||||||||||||||| |||| ||||||||||||| |||||    
T  41663854 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcac 41663924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 43959819 - 43959889
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||| | ||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  43959819 ggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 43959889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 4581681 - 4581750
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || |||||||||||| |||||||||||||||||||||| |||||    
T  4581681 gctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcac 4581750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 10422897 - 10422828
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| |||| ||| || ||||||||||||||||||||| ||||||||||||| |||||    
T  10422897 gctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 10422828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 21849215 - 21849291
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccc 228  Q
    ||||||||||| || ||| |||  ||||||||||||||||||||||||||||| ||   |||||| ||||||||||||||    
T  21849215 ggttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcg---cactagccaagcgttgttccc 21849291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 17092505 - 17092541
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatac 203  Q
    |||||||||||||||||||||||||||||||||||||    
T  17092505 ggtggacgactaatccggctcgtgcgtagaggcatac 17092541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 33004015 - 33004083
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||||||||| || | ||||||  |||||||||||||||||||||||||||| |||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcac 33004083  T

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Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 33418124 - 33418183
Alignment:
Q  148 tggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||| ||||| || || ||||||||||||||||||||||||| ||||||||| |||||    
T  33418124 tggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcac 33418183  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 35908840 - 35908798
Alignment:
Q  165 atggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  35908840 atggtggacgactaatccggctcatgcgtagaggcatgcgcac 35908798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 5855631 - 5855562
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||| |||||    
T  5855631 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcac 5855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 10507808 - 10507747
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagagg 198  Q
    |||||||| | |||||| ||||| || | |||||||||||||||||||||| ||||||||||    
T  10507808 ggctttcgaattggtttccgacccaccagtggtggacgactaatccggctcatgcgtagagg 10507747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 16956575 - 16956506
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| |||||| ||||| || || ||||   |||||||||||||||||||||||||||| |||||    
T  16956575 gctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcac 16956506  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 48798105 - 48798161
Alignment:
Q  174 gactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    |||||||||||||| ||||||||||||| ||   ||||||||||||||||||||| ||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcg---cactagtcaagcgttgttccccctgg 48798161  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 50503360 - 50503429
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || | |||||| |||| |||||||||||||||||||||||| |||||    
T  50503360 gctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcac 50503429  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 9659178 - 9659265
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccc 228  Q
    |||||||||  ||||| | ||| || || ||||||||||||||||||||| |||||| |||||| ||   |||||||||| ||||||||||    
T  9659178 gctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcg---cactagtcaaacgttgttccc 9659265  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 11397888 - 11397956
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    |||||||||  | ||| ||||| || || ||||||||||||||||| ||| ||||||||||||||||||    
T  11397888 gctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgca 11397956  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 18915977 - 18915913
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| | ||| || |||||||  |||||||||||||||||||||||||||||    
T  18915977 ggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcat 18915913  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 33498867 - 33498907
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  33498867 ggtggacgactaatccggctcatgcgtagaggcatgcgcac 33498907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 50095002 - 50094950
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||    
T  50095002 ggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcat 50094950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 10336596 - 10336538
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccc 228  Q
    ||||||||| ||||||||||| ||||||||||||| ||   |||| ||||||||||||||||    
T  10336596 ggtggacgattaatccggctcatgcgtagaggcatgcg---cactggtcaagcgttgttccc 10336538  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 5504111 - 5504077
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||||||||||||| |||||||||||||    
T  5504111 ggtggacgactaatccggctcatgcgtagaggcat 5504077  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 12036742 - 12036812
Alignment:
Q  138 gctttcgcagtggttttc-gacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| |||||||| || | || || ||||||||| ||||| ||||||||||||||||||| |||||    
T  12036742 gctttcgcactggttttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcac 12036812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 30927756 - 30927818
Alignment:
Q  168 gtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    |||||||||||||||||||| |||||||||||||  ||| || | | |||||||||||||||||||    
T  30927756 gtggacgactaatccggctcatgcgtagaggcat--gca-cattggccaagcgttgttccctctgg 30927818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 37339930 - 37339860
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| | ||| || || ||||| ||||||||||||||||||||| ||||||| |||||    
T  37339930 ggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcac 37339860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 48761256 - 48761222
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||| ||||||||||||||||||    
T  48761256 ggtggacgactaatccagctcgtgcgtagaggcat 48761222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 13262166 - 13262133
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagag 197  Q
    |||||||||||||||||||| |||||||||||||    
T  13262166 aatggtggacgactaatccgactcgtgcgtagag 13262133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 45361881 - 45361950
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| ||||| |||| |||||||||||||||  ||||||| ||||| |||||    
T  45361881 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcac 45361950  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 2980961 - 2980993
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||||||| |||||||||||||||||    
T  2980961 tggacgactaatccgactcgtgcgtagaggcat 2980993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 12150812 - 12150784
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  12150812 cgactaatccggctcgtgcgtagaggcat 12150784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 13266018 - 13265978
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  13266018 ggtggacgactaacccggctcatgcgtagaggcatgcgcac 13265978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 45726461 - 45726501
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||| |||||||||||||||| ||||||||| |||||||||    
T  45726461 ggtgaacgactaatccggctcatgcgtagagacatacgcac 45726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 8064807 - 8064865
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  8064807 ggttttcgacctattaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 8064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 42722576 - 42722644
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||||||||| ||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 42722644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 50486045 - 50485993
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  50486045 ggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcat 50485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 1940786 - 1940845
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcacc 208  Q
    ||||||||||| || || ||||| ||||||||||||||||||||||||||||| ||||||    
T  1940786 ggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc 1940845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 47078571 - 47078508
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||| |||||| ||||| || |||||||  |||||||||||||||||||||||||||||    
T  47078571 gctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcat 47078508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 5472858 - 5472915
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| || || ||||| ||||||||||||||||||||||||||||| |||||    
T  5472858 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 5472915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 29895899 - 29895831
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||| | || |||||||||||||||||||||||| ||||||||||||| |||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 29895831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 16450413 - 16450350
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||  ||||| |||||||| || ||||||||||||||| ||||| |||||||||||||    
T  16450413 gctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcat 16450350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 40780861 - 40780928
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||  ||||| ||||| || || ||||||||||||||||||||| ||||||||||||| |||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 40780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 1446911 - 1446870
Alignment:
Q  166 tggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  1446911 tggtggacgactaatccggctcatgcgtagaggcatgcgcac 1446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 29588849 - 29588780
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  | ||| ||||| || |||||||||  ||||||||||||||||||||||||||| |||||    
T  29588849 gctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcac 29588780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 38166140 - 38166071
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || ||||| ||||||||||||||||||||||||| ||| |||||    
T  38166140 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcac 38166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 2559419 - 2559351
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || || ||||||||| |||||||||| |||||||||||||| |||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcac 2559351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 3507354 - 3507295
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccct 229  Q
    |||||||||||||||||||||||| |||||||||  ||   |||||| |||||||||||||||    
T  3507354 ggtggacgactaatccggctcgtgtgtagaggcacgcg---cactagccaagcgttgttccct 3507295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 7246645 - 7246713
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || || ||||| ||||||||||||||| ||||||||||||| |||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 7246713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 36262764 - 36262828
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||| ||||||  |||| || || ||||| ||||||||||| |||||||||||||||||    
T  36262764 ggctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcat 36262828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 38168370 - 38168306
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| | ||| ||||| |||| |||||||||||||||| |||||||||||||    
T  38168370 ggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcat 38168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 43458697 - 43458657
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  43458697 ggtggacgactaatccggctcgtccgtagaggcatgcgcac 43458657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 48317302 - 48317338
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatac 203  Q
    ||||| |||||||||||||||||||||||||||||||    
T  48317302 ggtgggcgactaatccggctcgtgcgtagaggcatac 48317338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 49260692 - 49260732
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  49260692 ggtggtcgactaatccggctcgtgcgtagaggcatgcgcac 49260732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 41339419 - 41339458
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagaggcatac 203  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  41339419 aatggtgggcgactaatccgtctcgtgcgtagaggcatac 41339458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 3159478 - 3159536
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||| || |||||||  ||||||||| ||||||||||||||||||| |||||    
T  3159478 ggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcac 3159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 8889124 - 8889066
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||| || || ||||||||||||||||||||| ||||||||| ||| |||||    
T  8889124 ggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcac 8889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 14567317 - 14567283
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||| |||||    
T  14567317 cgactaatccggctcgtgcgtagaggcatgcgcac 14567283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 20128423 - 20128353
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  |||||  |||| || ||||||||||||||||||  ||||||||||| |||||| |||||    
T  20128423 ggctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcac 20128353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 53599174 - 53599104
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||| | ||||| |||| |||| ||||||||||| ||||||||||||| |||||    
T  53599174 ggctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcac 53599104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 30317335 - 30317255
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctg 232  Q
    ||||| ||||| || || ||||| |||||||| |||||||||||||||||||| ||    ||| | ||||||||||||||||||    
T  30317335 ggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcg---tactggccaagcgttgttccctctg 30317255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 295560 - 295600
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||| || |||||||||||||||| |||||    
T  295560 ggtggacgactaatctggttcgtgcgtagaggcatgcgcac 295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 6779295 - 6779255
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||| ||| ||||||||| |||||    
T  6779295 ggtggacgactaatccggctcatgcatagaggcatgcgcac 6779255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 14124128 - 14124060
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| | ||| || |||||||  |||||||||||||||||| |||||||||| |||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcac 14124060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 14597927 - 14597967
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  14597927 ggtggacgactaatccagttcgtgcgtagaggcatgcgcac 14597967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 20354720 - 20354665
Alignment:
Q  168 gtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttc 226  Q
    |||||||||||||||| ||| ||||||||||||| ||   |||||| ||||||||||||    
T  20354720 gtggacgactaatccgactcatgcgtagaggcatgcg---cactagccaagcgttgttc 20354665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 36145242 - 36145282
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||| || |||||||||| |||||    
T  36145242 ggtggacgactaatccggctcatgtgtagaggcatgcgcac 36145282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 54946351 - 54946299
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| || |||| ||| ||||||||||||||| |||||||||||||    
T  54946351 ggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcat 54946299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 39475051 - 39474982
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||| |||||||||| || |||||    
T  39475051 gctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcac 39474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 34659337 - 34659250
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccc 228  Q
    |||||||||  ||||||||||  || |||||||| ||||||||||||||||||||||||||||| ||   |||| ||||||||||||||||    
T  34659337 gctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcg---cactggtcaagcgttgttccc 34659250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 16802222 - 16802165
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| || |||||||  |||||||||||||||||||||||||||||||||||    
T  16802222 gttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcac 16802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 48804794 - 48804725
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || |||||||||||||||||||||||| ||||||||||||| |||||    
T  48804794 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 48804725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 36619252 - 36619315
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||| || ||||||| |||| || |||||||||||||||||||||||| |||||||||||||    
T  36619252 gctttcacactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcat 36619315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 3353506 - 3353466
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  3353506 ggtggacgactaatccggctcgtgcgtagaggcatgcgcac 3353466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 41945555 - 41945515
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  41945555 ggtggacgactaatccggctcgtgcgtagaggcatgcgcac 41945515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 24983443 - 24983486
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  24983443 aatggtggacgactaatccggctcatgcgtagaggcatgcgcac 24983486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 17748379 - 17748449
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| |  || ||||||||||||||||||||||| ||||||||||| |||||    
T  17748379 ggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcac 17748449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 37515021 - 37514963
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||| |||||||||| |||| ||||||||||||||||||||| ||| |||||    
T  37515021 ggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcac 37514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 4195200 - 4195269
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| | ||| || ||||||||||| |||||||||||| ||||||||||||| |||||    
T  4195200 gctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcac 4195269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 27875088 - 27875149
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||  ||||||||||| ||||| |||||||||||||| || ||| |||||||||||||    
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcat 27875149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 4705993 - 4706045
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||| |||| || |||||||||||||||| ||||||||||||| ||||    
T  4705993 ggttttcgatctaccaaaggtggacgactaatccagctcgtgcgtagaagcat 4706045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 5069812 - 5069876
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| || || ||||| |||||||||||||| ||||||||||||||    
T  5069812 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcat 5069876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 38578866 - 38578934
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || || ||||| ||||||||||||||| ||||||||||||| |||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 38578934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 32823319 - 32823284
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcatacgcacc 208  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32823319 cgactaatccggctcgtgcgtagaggcatacacacc 32823284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 10047873 - 10047935
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggc 199  Q
    ||||||||||  ||||| ||||| || ||||||||||||||||| | |||| |||||||||||    
T  10047873 ggctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggc 10047935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 201
Target Start/End: Complemental strand, 30827370 - 30827340
Alignment:
Q  171 gacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||||    
T  30827370 gacgactaatccggctcgtgcgtagaggcat 30827340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 42210259 - 42210329
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || |||||  || ||||||||||||||||||||||||| |||||    
T  42210259 ggctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcac 42210329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 43346777 - 43346847
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcacc 208  Q
    ||||||||| |||||| ||||| || || | ||  ||||||||||||||||| ||||||||||| ||||||    
T  43346777 gctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcacc 43346847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 43861969 - 43862039
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||||||| | || || |||| | |||||||||||||| ||||||||||||| |||||    
T  43861969 ggctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcac 43862039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 47341988 - 47341918
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  | ||| ||||| || ||||||| ||||| ||||| |||||||||||||||||| |||||    
T  47341988 ggctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcac 47341918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 48244353 - 48244423
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||||||| | || || ||||  ||||||||||||||| |||||||||||| ||||||    
T  48244353 ggctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcac 48244423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 4973139 - 4973176
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  4973139 tggacgactaatccggctcgtacgtagaggcatgcgca 4973176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 8734684 - 8734753
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || ||||| ||||||||| ||||||||||| ||||||| |||||    
T  8734684 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcac 8734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 14535376 - 14535339
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  14535376 aatggtgggcgactaatccagctcgtgcgtagaggcat 14535339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 21190778 - 21190847
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||||||||| || | || ||| ||||||||| | ||||||||||||||||| |||||    
T  21190778 gctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcac 21190847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 23658259 - 23658198
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    |||||||||||||||||||||| ||||||||||  ||| |||| | |||||||||||||| ||||    
T  23658259 tggacgactaatccggctcgtgtgtagaggcat--gca-cactggccaagcgttgttccccctgg 23658198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 28396169 - 28396229
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcacca 209  Q
    ||||| ||||| || || ||| ||||||||||||||||| |||||| |||||| |||||||    
T  28396169 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcacca 28396229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 6100585 - 6100515
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| ||||||||||| ||||| |||| |||||||||||||||| ||||||| ||||| |||||    
T  6100585 ggctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcac 6100515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 10927719 - 10927649
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| ||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  10927719 ggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 10927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 15884556 - 15884623
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||  ||||| ||||| || || ||||| ||||||||||||||||||||||||||||| |||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 15884623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 18374111 - 18374037
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttc 226  Q
    ||||||||||| || || | ||||||||||||||||||| ||||||||||||| ||   |||| ||||||||||||||    
T  18374111 ggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcg---cactggtcaagcgttgttc 18374037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 13357965 - 13358017
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| ||||| || |||||||||||||||||||||| |||||||||    
T  13357965 ggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcat 13358017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 4479296 - 4479363
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||  ||||| ||||| || || |||||||||||||||| |||| ||||||||||||| |||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcac 4479363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 14666068 - 14666138
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||||||||| || ||  |||| ||||||||| |||| |||||||||||||| |||||    
T  14666068 ggctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcac 14666138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 8803167 - 8803106
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagagg 198  Q
    ||||||||||  ||||| ||||| || | || ||| ||||||||||||||||||||||||||    
T  8803167 ggctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagagg 8803106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 43027386 - 43027349
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  43027386 tggacgactaatccggctcatgcgtagaggcatgcgca 43027349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 43033013 - 43032944
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  |||||  |||| || || ||||| |||||||||||||||||| |||||||||| |||||    
T  43033013 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcac 43032944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 583895 - 583836
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccct 229  Q
    ||||| ||||||||||| ||| ||||||||||||| ||   |||| |||||||||||||||||    
T  583895 ggtgggcgactaatccgactcatgcgtagaggcatgcg---cactggtcaagcgttgttccct 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 2964189 - 2964125
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  |||||  |||| || || ||||| |||||||||||| ||||||||||||||||    
T  2964189 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcat 2964125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 26571007 - 26570971
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatac 203  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  26571007 ggtggacgactaatccggctcatgcgtagatgcatac 26570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 42086437 - 42086344
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    ||||||||||  ||||| ||||| || || ||||||||||||||||||||| ||||||||||||| ||   |||| |||||||||||||||| ||||    
T  42086437 ggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcg---cactggtcaagcgttgttccccctgg 42086344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 1538541 - 1538471
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || |||||||||||| ||||||||||| ||||||||||||| |||||    
T  1538541 ggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcac 1538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 19572834 - 19572764
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| |||||| | ||| || ||||||| |||||||||||||||| ||||||||||||| |||||    
T  19572834 ggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcac 19572764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 9168264 - 9168320
Alignment:
Q  151 ttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||| || |||||    
T  9168264 ttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcac 9168320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 3653923 - 3653997
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttc 226  Q
    ||||||||| | || || ||||||||||||||||| ||||||||||||||||| ||   |||| ||||||||||||||    
T  3653923 ggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcg---cactggtcaagcgttgttc 3653997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 8513628 - 8513565
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||  ||||| ||||| || || ||||||||||||||| |||||||||||||||||||    
T  8513628 gctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcat 8513565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 20525921 - 20525878
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  20525921 aatggtggacgactaatccggctcatgcgtagaggcatgcgcac 20525878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 37263320 - 37263281
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  37263320 ggtggacgactaatccggctcgtgcgtagaggcatgcgca 37263281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 4016252 - 4016322
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| |||||| ||||| || |||||||  | |||||||||||||||| |||||||||| |||||    
T  4016252 ggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcac 4016322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 9805114 - 9805044
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||   |||| ||||| || || ||||||||||||||||||||| ||||||||||||| |||||    
T  9805114 ggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 9805044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 24463895 - 24463953
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||| |||||    
T  24463895 ggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcac 24463953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 38897716 - 38897786
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| |||||| ||| | || || ||||| | ||||||||||||||||||||||||||| |||||    
T  38897716 ggctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcac 38897786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 42291532 - 42291566
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||||||||    
T  42291532 ggtggacgactaatccggctcgtgcgtagaggcat 42291566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 42861215 - 42861285
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||| | ||||| || |||||||||||| ||||||||||| ||||||||||||| |||||    
T  42861215 ggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcac 42861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 5079440 - 5079372
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    ||||||||||  ||||||||||| || || ||||| |||||||||||||||||||||||| |||| ||||    
T  5079440 ggctttcgcaccggttttcgacc-accaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgca 5079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 20682615 - 20682684
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| | ||| ||||| ||||| ||| ||||||||||||||||||||||||| |||||    
T  20682615 gctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcac 20682684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 43399237 - 43399168
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || ||  ||||||||||||||| |||||||||||||||||| |||||    
T  43399237 gctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcac 43399168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 14588644 - 14588684
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  14588644 ggtggacgactaatccggctcatgcgtagaggcatgcgcac 14588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 23247349 - 23247412
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  |||||||||||  | || ||||||||||||||| |||||||||||||||||||    
T  23247349 ggctttcgcaccggttttcgaccatcaaa-ggtggacgactaatctggctcgtgcgtagaggcat 23247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 25453022 - 25452971
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||| ||||| | ||| |||||||||||||||||||||||||||||    
T  25453022 ggttttcgaccgactaaagttgg-cgactaatccggctcgtgcgtagaggcat 25452971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 32874884 - 32874809
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccc 228  Q
    |||| ||||| || |||||||||||| |||| ||||||||||||| ||| || ||   |||||||||||||||||||||    
T  32874884 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcg---cactagtcaagcgttgttccc 32874809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 5731917 - 5731987
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| ||||| |||| |||||||||| ||||| | ||||||||||| |||||    
T  5731917 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcac 5731987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 6764490 - 6764524
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||| |||||    
T  6764490 cgactaatccggctcgtgcgtagaggcatgcgcac 6764524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 14974351 - 14974385
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||||||||||||| |||||||||||||    
T  14974351 ggtggacgactaatccggctcatgcgtagaggcat 14974385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 20223160 - 20223099
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||| |||||| ||||||||||| ||||||||||||||  | ||| ||| |||||||||    
T  20223160 tttcgcaatggtttccgacctactaaaggtggacgactaatttgactcatgcctagaggcat 20223099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 24653810 - 24653878
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||||||||| || |||||||||||| ||||||||||  |||||||||| || |||||    
T  24653810 gctttcgcatcggttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcac 24653878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 40117524 - 40117455
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||||||| | || || |||| |||| ||||||||||| ||||||||||||| |||||    
T  40117524 gctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcac 40117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 7336696 - 7336660
Alignment:
Q  171 gacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  7336696 gacgattaatccggctcgtgcgtagaggcatgcgcac 7336660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 12081988 - 12081948
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||| ||||||||||||||| |||| |||||    
T  12081988 ggtggacgactaattcggctcgtgcgtagatgcatgcgcac 12081948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 20255449 - 20255409
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||| ||| ||||||||||||| |||||    
T  20255449 ggtggacgactaatccgactcatgcgtagaggcatgcgcac 20255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 22655155 - 22655218
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||| |||||||||||| || || ||||||||||||||| | ||  |||||||||||||    
T  22655155 ggctttcgcactggttttcgacccac-aaaggtggacgactaatctgacttatgcgtagaggcat 22655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 24875425 - 24875385
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| ||||||||||||||||||||| ||| |||||    
T  24875425 ggtggacgattaatccggctcgtgcgtagagacatgcgcac 24875385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 30995195 - 30995167
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  30995195 cgactaatccggctcgtgcgtagaggcat 30995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 39099788 - 39099840
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| || || ||||| ||||||||||||||| |||||||||||||    
T  39099788 ggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcat 39099840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 49021201 - 49021271
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || |||||||||||||||||||||||| ||||||||||||| |||||    
T  49021201 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 49021271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 47749103 - 47749173
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| |||||||| || ||||| |||||||| |||||||||||||||||||| |||||    
T  47749103 ggctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcac 47749173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 54237557 - 54237487
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| ||||||||||||||||| ||||||||| ||||||||| ||| |||||    
T  54237557 ggctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcac 54237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 28572209 - 28572273
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| || || ||||| |||||||||||||||||||||||||||||    
T  28572209 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcat 28572273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 54261333 - 54261265
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| ||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 54261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 49198433 - 49198390
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  49198433 aatggtggacgactaatccggctcatgcgtagaggcatgcgcac 49198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 51682955 - 51683045
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    ||||||| |||||| ||||| || | |||||| |||||||||||||||||| | |||||||| ||   |||| |||||||||||||||| ||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcg---cactggtcaagcgttgttccccctgg 51683045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 3136692 - 3136762
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || ||||||||||||||||| ||| ||||||||||||| |||||    
T  3136692 ggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcac 3136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 25295069 - 25294999
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| | ||| || |||||||||||||||||||||||| ||| ||||||||| |||||    
T  25295069 ggctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcac 25294999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 29128028 - 29127958
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || ||||| ||||||||||||||| ||||||||||||| |||||    
T  29128028 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 29127958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 30767247 - 30767309
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||| | |||| ||||| || || ||||| |||||||||||||||||||||||||||||    
T  30767247 ctttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcat 30767309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 43330742 - 43330800
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||| |||| || || ||||| ||||||||||||||||||||||||||||| |||||    
T  43330742 ggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 43330800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 47219253 - 47219183
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| |  || ||||||||||||||||||||| ||||||||||||| |||||    
T  47219253 ggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 47219183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 50405613 - 50405671
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| |||||    
T  50405613 ggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcac 50405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 51060279 - 51060349
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || ||||||||||||||||||| | || ||||||||||||| |||||    
T  51060279 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcac 51060349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 7648848 - 7648779
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| ||| |||||||| |  || ||||| |||||||||||||||||||||||||| || |||||    
T  7648848 gctttcgcattggatttcgacccaacaaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcac 7648779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 13894035 - 13893966
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    ||||||||||  ||||||||| | || || ||||| |||||||||||||||||| |||||||||| ||||    
T  13894035 ggctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgca 13893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 45402362 - 45402419
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||| ||||| ||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  45402362 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 45402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 15320295 - 15320231
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  |||||  |||| || || ||||| |||||||||||||||||||||||||||||    
T  15320295 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcat 15320231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 29762155 - 29762223
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || ||||||||||||||||||| |||| ||| ||||||||| |||||    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcac 29762223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 33251771 - 33251707
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||| | |||||||||| |  ||  |||||||||||||||||||| |||||||||||||    
T  33251771 ggctttcgcactcgttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcat 33251707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 3507534 - 3507601
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||  ||||| ||||| || || ||||  ||||||||||||||||||||||||||||| |||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcac 3507601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 29135995 - 29135952
Alignment:
Q  164 aatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||    
T  29135995 aatggtggaagactaatccggctcatgcgtagaggcatgcgcac 29135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 49543615 - 49543564
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||| ||||| ||||| ||||| |||||||| ||||||||||||||||||||    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcat 49543564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 928709 - 928639
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  | ||||||||  || || |||||| |||||||||||||||||||||| ||||| |||||    
T  928709 ggctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcac 928639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 15795504 - 15795562
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| || | |||||| |||||||| | |||||||||||||||||| |||||    
T  15795504 ggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcac 15795562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 36043672 - 36043730
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtag 195  Q
    ||||||||||  ||||| ||||| || || ||||| |||||||||||||||||||||||    
T  36043672 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 45877561 - 45877499
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||  ||||| ||||| |  ||||||| |||||||||||||||| |||||||||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcat 45877499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 2029268 - 2029329
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||| |||||| ||||| |  |||||||| |||||||||| |||| |||||||||||||    
T  2029268 tttcgcactggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcat 2029329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 7328951 - 7328883
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||||||||| || || ||||| ||||||||||||||| |||||| |||||| |||||    
T  7328951 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcac 7328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 19873449 - 19873420
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagagg 198  Q
    ||||||||||||||||||||||||||||||    
T  19873449 tggacgactaatccggctcgtgcgtagagg 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 23511675 - 23511606
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||||||||| |  || ||||||||| ||||||| ||| ||||||||||||| |||||    
T  23511675 gctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcac 23511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 7310737 - 7310765
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  7310737 cgactaatccggctcgtgcgtagaggcat 7310765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 10040635 - 10040595
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| | |||||||||||||||||||||| |||||    
T  10040635 ggtggacgaccattccggctcgtgcgtagaggcatgcgcac 10040595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 19147068 - 19147004
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatac 203  Q
    ||||||||  ||||| ||||| || || |||||||||||||||| |||||||| |||||| ||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatac 19147004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 26207811 - 26207863
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| ||||||  ||| ||||||||||||||| |||||||||||||    
T  26207811 ggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcat 26207863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 26362001 - 26362029
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  26362001 cgactaatccggctcgtgcgtagaggcat 26362029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 35998569 - 35998633
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  |||||  |||| ||||| ||||||||| ||||||  |||||||||||||||||    
T  35998569 ggctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcat 35998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 47471938 - 47471870
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || || |||||||||||||| |||||| |||||||| |||| |||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcac 47471870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 50753351 - 50753403
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| || |||| || |||||||||||| |||||||||||||||||    
T  50753351 ggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcat 50753403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 52364832 - 52364891
Alignment:
Q  171 gacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    ||||| |||||| |||||||||||||||||| ||   |||| ||||||||||||||| |||||    
T  52364832 gacgattaatccagctcgtgcgtagaggcatgcg---cactggtcaagcgttgttccttctgg 52364891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 6358160 - 6358218
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||    
T  6358160 ggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 6358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 25540402 - 25540471
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || ||||||||||||||||||||||||||||||||||| |||||    
T  25540402 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 25540471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 35946834 - 35946783
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  35946834 gtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcat 35946783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 10823169 - 10823099
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || ||||| ||||||||||||||||||||||||||||| |||||    
T  10823169 ggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 10823099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 12455419 - 12455349
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || |||||||  ||||||||||||||||||||||||||||| |||||    
T  12455419 ggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcac 12455349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 44945702 - 44945632
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||| | ||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  44945702 ggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 44945632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 7747383 - 7747319
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| ||||| |||| |||||||||||||||| |||||||||||||    
T  7747383 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcat 7747319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 34738342 - 34738394
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| |||||||| | |||||||||||||||||| |||||||||||||||||    
T  34738342 ggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat 34738394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 16325703 - 16325640
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||  ||||| ||||| || |||||||||||||||||| ||||| |||||||||||||    
T  16325703 gctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcat 16325640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 41031904 - 41031967
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||| |||||| ||||| || || |||||  ||||||||||||||||||||||||||||    
T  41031904 gctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcat 41031967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 37560270 - 37560212
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| |  || ||||||||| ||||||||||||||||||||||||| |||||    
T  37560270 ggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcac 37560212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 41220744 - 41220674
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| ||||| |||| ||||||||| |||||| ||||||||||||| |||||    
T  41220744 ggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcac 41220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 42770660 - 42770718
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| || || ||||||||| |||||||||||||||| |||||||| |||||    
T  42770660 ggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcac 42770718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 44139592 - 44139530
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggca 200  Q
    |||||||||  ||||| ||||| || | |||||| ||||||||||||||||||||||||||||    
T  44139592 gctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggca 44139530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 28525465 - 28525522
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||| ||||| | ||| |||||| |||||||||||||||||||||||||||| |||||    
T  28525465 gtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcac 28525522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 9360747 - 9360815
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| || || ||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcac 9360815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 12864331 - 12864263
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || |||||||||||||||||| ||||| |||| |||||||| |||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcac 12864263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 14169608 - 14169676
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || |||||| ||||||||||||||||| ||||||||| ||| |||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcac 14169676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 22593213 - 22593173
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  22593213 ggtggacgactaatccggctcatgcgtagaggcatgcgcac 22593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 25549805 - 25549773
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||||||    
T  25549805 tggacgactaatccggctcgtgcgtagaggcat 25549773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 8410209 - 8410170
Alignment:
Q  168 gtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  8410209 gtgggcgactaatccggctcgtgcgtagaggcatgcgcac 8410170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 16813164 - 16813226
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||| || ||| | |||||| || | ||||||||||||||||||||||| |||||||||    
T  16813164 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcat 16813226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 16852443 - 16852505
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||| || ||| | |||||| || | ||||||||||||||||||||||| |||||||||    
T  16852443 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcat 16852505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 27726037 - 27725979
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||| || | |||||| |||||||||||||| |||||||||||||| |||||    
T  27726037 ggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcac 27725979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 45263704 - 45263757
Alignment:
Q  177 taatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    ||||||||||||||||||||||||| ||   |||| | |||||||||||||||||||    
T  45263704 taatccggctcgtgcgtagaggcatgcg---cactggccaagcgttgttccctctgg 45263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 3643885 - 3643954
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| || || || || |||||||||||||||| |||| ||||||||||||| |||||    
T  3643885 gctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcac 3643954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 4120213 - 4120180
Alignment:
Q  168 gtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||||||| ||||||||||||||||||    
T  4120213 gtggacgactaatccagctcgtgcgtagaggcat 4120180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 10026626 - 10026683
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||| ||||| || || ||||| ||||||||||||||| ||||||||||||| |||||    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcac 10026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 10046487 - 10046544
Alignment:
Q  150 gttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||| ||||| || || ||||| ||||||||||||||| ||||||||||||| |||||    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcac 10046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 11069986 - 11069917
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || |||||||||||||| | ||||||||||||||| || |||||    
T  11069986 gctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcac 11069917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 20116609 - 20116678
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    ||||||||||  ||||| ||||| |  || |||||||| |||||||||||| ||||||||||||| ||||    
T  20116609 ggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgca 20116678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 28616377 - 28616446
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  |||||  |||| ||||| | ||| ||||||||| ||||||||||||||||||| |||||    
T  28616377 gctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcac 28616446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 1773644 - 1773700
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtaga 196  Q
    |||||||  ||||||||||| || |||||||||||||||||||  ||| ||||||||    
T  1773644 tttcgcaccggttttcgacccaccaatggtggacgactaatccaactcatgcgtaga 1773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 7787129 - 7787101
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  7787129 cgactaatccggctcgtgcgtagaggcat 7787101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 18902528 - 18902615
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccc 228  Q
    |||||||||  ||||| ||||| || || ||||| ||||||||| ||||||||||||||| ||  ||   |||| ||||||||||||||||    
T  18902528 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcg---cactggtcaagcgttgttccc 18902615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 20612534 - 20612602
Alignment:
Q  140 tttcgcagtggttttcgacctactaatggtggacgactaat-ccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||  ||||| ||||| || ||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcac 20612602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 21180347 - 21180375
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  21180347 cgactaatccggctcgtgcgtagaggcat 21180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 24179645 - 24179613
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||||||||||| |||||||||||||    
T  24179645 tggacgactaatccggctcatgcgtagaggcat 24179613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 38962842 - 38962802
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||||| || ||||||||||||| |||||    
T  38962842 ggtggacgactaatccggttcatgcgtagaggcatgcgcac 38962802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 39201517 - 39201569
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| || || |||| |||||||||||||||| |||||||||||||    
T  39201517 ggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcat 39201569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 6606094 - 6606158
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| || |||||||||||||||||||||||| |||||||||||||    
T  6606094 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcat 6606158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 14783417 - 14783481
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| || |||||||||||||||||||||||| |||||||||||||    
T  14783417 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcat 14783481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 9633622 - 9633692
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || ||||| ||||||||||||||||||||||||||||| |||||    
T  9633622 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 9633692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 21898761 - 21898691
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| ||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  21898761 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 21898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 19089611 - 19089547
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| || || ||| |||||||||||||||||||||||||||||||    
T  19089611 ggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcat 19089547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 12635927 - 12635857
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || ||| |||| |||||||||||||| |||||||||||||| |||||    
T  12635927 ggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcac 12635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 30788850 - 30788920
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||  ||||| ||||| || || ||||| ||||||||||||||||||| ||||||||| |||||    
T  30788850 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcac 30788920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 3601196 - 3601127
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || |||||||||||||||||||||||| ||| |||||| |||||    
T  3601196 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcac 3601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 13036002 - 13036071
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || ||| |||||||||||||| ||||| ||||||||||||| |||||    
T  13036002 gctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcac 13036071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 2271330 - 2271370
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  2271330 ggtggacgactaatccggctcgtgcgtagagacatgcgcac 2271370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 12606513 - 12606473
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  12606513 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 12606473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 13469046 - 13468982
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| | ||| || |||||||| ||||||||| |||||||||||||||||||    
T  13469046 ggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcat 13468982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 14107355 - 14107419
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||  ||||| ||||| ||||||  ||| ||||||||||||||| |||||||||||||    
T  14107355 ggctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcat 14107419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 4596230 - 4596184
Alignment:
Q  141 ttcgcagtggttttcgacctactaatggtggacgactaatccggctc 187  Q
    |||||| |||||| | ||| |||||||||||||||||||||||||||    
T  4596230 ttcgcactggtttccaacccactaatggtggacgactaatccggctc 4596184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 13391387 - 13391329
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||| | |||   ||| ||||||||||||||||||||||||||||| |||||    
T  13391387 ggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcac 13391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 29444762 - 29444832
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||| | |||| ||||| || || | ||||| ||||||||||||| ||||||||||||| |||||    
T  29444762 ggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcac 29444832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 5253221 - 5253290
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || ||||| ||| ||||||||||| ||||||||||||| |||||    
T  5253221 gctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcac 5253290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 19230591 - 19230620
Alignment:
Q  172 acgactaatccggctcgtgcgtagaggcat 201  Q
    ||||||||||||||||||||||||||||||    
T  19230591 acgactaatccggctcgtgcgtagaggcat 19230620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 33940092 - 33940055
Alignment:
Q  169 tggacgactaatccggctcgtgcgtagaggcatacgca 206  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  33940092 tggacgactaatccggctcgtgtgtagaggcatgcgca 33940055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 9366423 - 9366490
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||||  |||||| || ||||| || |||||||||||||||||||||||||| |||||    
T  9366423 ctttcgcatcggtttttaacctaccaaaggtgg-cgtctaatccggctcgtgcgtagaggcatgcgcac 9366490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 24671896 - 24671956
Alignment:
Q  170 ggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    |||| |||||||||||| ||||||||||||||  ||| |||| |||||| ||||||||||||||    
T  24671896 ggactactaatccggcttgtgcgtagaggcat--gca-cactggtcaagtgttgttccctctgg 24671956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 29333154 - 29333206
Alignment:
Q  155 cgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||| || ||||||||||| || |||||| ||||||||||||| |||||    
T  29333154 cgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcac 29333206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 34954617 - 34954677
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagagg 198  Q
    ||||||||| |||||| ||||| |  || ||||||||||||||| ||||| ||||||||||    
T  34954617 gctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagagg 34954677  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 68614 - 68555
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcacc 208  Q
    ||||||||||| || || ||||| ||||||||||||||||||||||||||||| ||||||    
T  68614 ggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc 68555  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 155708 - 155801
Alignment:
Q  137 ggctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    ||||||||||  || || ||||| || || ||||| ||||||||||||||||||||||||||||| ||   |||||| |||||||||||||| ||||    
T  155708 ggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcg---cactagccaagcgttgttccccctgg 155801  T

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Target: scaffold0170 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 9927 - 9887
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  9927 ggtggacgactaatccggctcgtgcgtagaggcatgcgcac 9887  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 26293 - 26202
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccctctgg 233  Q
    |||||||| |||||| ||||  |  ||| ||||||||||||||||||||||||||||||||||  ||| |||| | |||||||||||||| ||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcat--gca-cactggccaagcgttgttccccctgg 26202  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 186617 - 186565
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| ||||| | || ||||||||||||||||||||||||||||||    
T  186617 ggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcat 186565  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 224427 - 224368
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagagg 198  Q
    ||||||||  ||||| ||||| || || | ||||||||||||||||||||||||||||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagagg 224368  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 250058 - 250092
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||||||||||||||||||||||| |||||    
T  250058 cgactaatccggctcgtgcgtagaggcatgcgcac 250092  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 219451 - 219411
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  219451 ggtggacgactaatccagttcgtgcgtagaggcatgcgcac 219411  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 1612 - 1681
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||||||||| || || ||||| ||||||||  ||||| ||||||||||||| |||||    
T  1612 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcac 1681  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 6966 - 6897
Alignment:
Q  138 gctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    |||||||||  ||||| ||||| || || ||||  ||||||||||||||| ||||||||||||| |||||    
T  6966 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 6897  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 6072 - 6020
Alignment:
Q  149 ggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcat 201  Q
    ||||| ||||| || ||||||||||||||||| || ||| |||||||||||||    
T  6072 ggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcat 6020  T

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Target: scaffold0209 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 12655 - 12596
Alignment:
Q  167 ggtggacgactaatccggctcgtgcgtagaggcatacgcaccactagtcaagcgttgttccct 229  Q
    ||||| ||||||||||| ||| ||||||||||||| ||   |||| |||||||||||||||||    
T  12655 ggtgggcgactaatccgactcatgcgtagaggcatgcg---cactggtcaagcgttgttccct 12596  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 41120 - 41092
Alignment:
Q  173 cgactaatccggctcgtgcgtagaggcat 201  Q
    |||||||||||||||||||||||||||||    
T  41120 cgactaatccggctcgtgcgtagaggcat 41092  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 42831 - 42899
Alignment:
Q  139 ctttcgcagtggttttcgacctactaatggtggacgactaatccggctcgtgcgtagaggcatacgcac 207  Q
    ||||||||  ||||| ||||| || || ||||| ||||||||||||||| || |||||||||| |||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 42899  T

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