View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1547_low_38 (Length: 258)
Name: NF1547_low_38
Description: NF1547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1547_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 31455316 - 31455548
Alignment:
| Q |
8 |
gtgagatgaagaaaatggaaaacaaagtaaagcttttttctattatgggacaagatcaaaatttaatatttttggctaaggttttaagagaagctaccac |
107 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31455316 |
gtgaaatgaagaaaatggaaaacaaagtaaagcttttttctattatgggccaagatcaaaatttaatatttttggctaaggttttaagagaagctaccac |
31455415 |
T |
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| Q |
108 |
catcacaatatctatatttcgttctcttttactattcatatcaacgccaagacttcgaacaacaaaaggatcatcgttgatctcgaagcttaatccaaca |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31455416 |
catcacaatatctatatttcgttctcttttactattcatatcaacgccaagacttcgaacaacaaaaggatcatcgttgatctcgaagcttaatccaaca |
31455515 |
T |
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| Q |
208 |
agattgttttcttcagagaatgaacataagaac |
240 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
31455516 |
agattgttttcttcagagaatgaacataagaac |
31455548 |
T |
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