View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1547_low_40 (Length: 250)
Name: NF1547_low_40
Description: NF1547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1547_low_40 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 37365999 - 37366218
Alignment:
| Q |
19 |
aatcctctcccacttcgtctccgtttgcacctctcttcaccaaattccttacgccacaaccatcttcaaccatacccatcaccccaacattctcctcttc |
118 |
Q |
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| T |
37365999 |
aatcctctcccacttcgtctccgtttgcacctctcttcaccaaattccttacgccacaaccatcttcaaccatacccatcaccccaacattctcctcttc |
37366098 |
T |
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| Q |
119 |
aactccattatcaaagcccattcttcattcccaccttttcatcaatccttccactttttcaacctcatgaaaataacccacaacattttacctgataact |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
37366099 |
aactccattatcaaagcccattcttcattcccaccttttcatcaatccttccactttttcaacctcatgaaaatgacccacaacattttacctgataact |
37366198 |
T |
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| Q |
219 |
tcactttcccacctttgctt |
238 |
Q |
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|||||||||||||||||||| |
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| T |
37366199 |
tcactttcccacctttgctt |
37366218 |
T |
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