View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1547_low_5 (Length: 488)

Name: NF1547_low_5
Description: NF1547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1547_low_5
NF1547_low_5
[»] chr5 (44 HSPs)
chr5 (19-478)||(28857574-28858035)
chr5 (19-205)||(31986714-31986900)
chr5 (93-210)||(24771354-24771469)
chr5 (96-204)||(36253815-36253921)
chr5 (96-203)||(17510048-17510153)
chr5 (96-204)||(42019562-42019668)
chr5 (96-204)||(17504942-17505048)
chr5 (94-204)||(1414049-1414157)
chr5 (96-201)||(13582690-13582793)
chr5 (96-201)||(14374127-14374230)
chr5 (96-204)||(26709091-26709199)
chr5 (96-204)||(26978825-26978933)
chr5 (110-210)||(24776829-24776927)
chr5 (96-204)||(41858583-41858688)
chr5 (96-198)||(7805066-7805166)
chr5 (96-201)||(24435869-24435972)
chr5 (25-201)||(31731535-31731710)
chr5 (95-196)||(37248794-37248894)
chr5 (112-204)||(41853538-41853627)
chr5 (25-201)||(21323894-21324069)
chr5 (95-196)||(26667268-26667368)
chr5 (95-196)||(26938865-26938965)
chr5 (95-196)||(29167972-29168072)
chr5 (95-196)||(10759819-10759918)
chr5 (95-196)||(556691-556791)
chr5 (95-196)||(561463-561563)
chr5 (124-221)||(1430011-1430107)
chr5 (95-196)||(6514600-6514700)
chr5 (95-196)||(12103021-12103121)
chr5 (95-196)||(36423633-36423733)
chr5 (95-196)||(36428705-36428805)
chr5 (95-196)||(36937510-36937610)
chr5 (95-196)||(36942264-36942364)
chr5 (31-81)||(1429929-1429979)
chr5 (96-201)||(13301486-13301589)
chr5 (95-196)||(39518406-39518506)
chr5 (95-196)||(39523045-39523145)
chr5 (95-196)||(42001430-42001530)
chr5 (95-195)||(32461548-32461647)
chr5 (175-221)||(36949083-36949129)
chr5 (95-196)||(12045138-12045238)
chr5 (95-196)||(12501898-12501998)
chr5 (18-142)||(36949148-36949272)
chr5 (95-196)||(41996661-41996761)
[»] chr4 (46 HSPs)
chr4 (19-226)||(34644524-34644730)
chr4 (19-209)||(17359520-17359705)
chr4 (96-204)||(8980285-8980391)
chr4 (96-204)||(8985405-8985511)
chr4 (90-210)||(13695142-13695260)
chr4 (96-204)||(13700499-13700605)
chr4 (96-204)||(21299833-21299939)
chr4 (96-204)||(41393234-41393340)
chr4 (96-204)||(51019373-51019479)
chr4 (96-204)||(54991475-54991581)
chr4 (96-210)||(13710652-13710763)
chr4 (96-204)||(21304953-21305059)
chr4 (96-204)||(36359283-36359389)
chr4 (96-204)||(39999058-39999164)
chr4 (96-204)||(40004016-40004122)
chr4 (96-204)||(53797618-53797724)
chr4 (96-204)||(54343192-54343298)
chr4 (96-204)||(54348346-54348452)
chr4 (96-203)||(47046307-47046412)
chr4 (96-204)||(36354165-36354271)
chr4 (96-202)||(24490022-24490127)
chr4 (117-211)||(39319613-39319706)
chr4 (96-201)||(653035-653138)
chr4 (98-203)||(10120811-10120914)
chr4 (96-208)||(8083027-8083138)
chr4 (94-210)||(10318777-10318892)
chr4 (95-196)||(31269030-31269130)
chr4 (95-196)||(37259876-37259976)
chr4 (34-196)||(3997995-3998155)
chr4 (95-196)||(5271418-5271518)
chr4 (95-196)||(13521991-13522091)
chr4 (95-196)||(16421025-16421125)
chr4 (95-196)||(31273517-31273617)
chr4 (95-196)||(37264563-37264663)
chr4 (25-201)||(41816776-41816951)
chr4 (96-192)||(9764021-9764115)
chr4 (96-167)||(30564414-30564485)
chr4 (20-81)||(19724951-19725012)
chr4 (95-196)||(31765882-31765982)
chr4 (20-144)||(3258161-3258285)
chr4 (121-201)||(34560489-34560568)
chr4 (96-179)||(31298385-31298466)
chr4 (95-169)||(31729386-31729460)
chr4 (95-196)||(55251716-55251815)
chr4 (95-196)||(8693707-8693807)
chr4 (46-195)||(30255530-30255679)
[»] chr6 (26 HSPs)
chr6 (19-210)||(10642692-10642883)
chr6 (96-209)||(24192480-24192591)
chr6 (96-204)||(29491237-29491343)
chr6 (23-206)||(5600896-5601081)
chr6 (96-209)||(24191383-24191494)
chr6 (96-204)||(21396688-21396794)
chr6 (96-204)||(22698243-22698349)
chr6 (96-203)||(31981550-31981655)
chr6 (98-203)||(3901902-3902006)
chr6 (96-196)||(12183000-12183099)
chr6 (96-203)||(17281563-17281669)
chr6 (96-203)||(19478138-19478243)
chr6 (102-204)||(21401744-21401844)
chr6 (19-169)||(22713717-22713867)
chr6 (96-204)||(22703366-22703472)
chr6 (96-203)||(13605092-13605197)
chr6 (96-202)||(34142071-34142175)
chr6 (96-202)||(34154687-34154791)
chr6 (98-203)||(29325525-29325629)
chr6 (96-204)||(34375908-34376014)
chr6 (96-204)||(2818147-2818253)
chr6 (95-196)||(11570748-11570848)
chr6 (110-208)||(5740804-5740901)
chr6 (95-169)||(17964558-17964632)
chr6 (96-197)||(6112973-6113072)
chr6 (159-203)||(6728397-6728440)
[»] chr3 (55 HSPs)
chr3 (25-223)||(27605064-27605261)
chr3 (19-226)||(1688808-1689015)
chr3 (19-221)||(795327-795529)
chr3 (19-210)||(2617177-2617369)
chr3 (19-165)||(1741030-1741178)
chr3 (96-204)||(17368708-17368814)
chr3 (96-203)||(3476946-3477051)
chr3 (96-204)||(17364052-17364160)
chr3 (96-204)||(20090662-20090768)
chr3 (96-204)||(20095787-20095893)
chr3 (96-204)||(34129169-34129275)
chr3 (96-204)||(54270633-54270739)
chr3 (42-237)||(23071488-23071681)
chr3 (27-167)||(26706808-26706951)
chr3 (96-204)||(15763030-15763136)
chr3 (96-203)||(33089343-33089448)
chr3 (96-204)||(17357825-17357933)
chr3 (96-204)||(15768191-15768297)
chr3 (96-203)||(13022017-13022122)
chr3 (114-237)||(23074427-23074549)
chr3 (96-210)||(4117600-4117712)
chr3 (96-193)||(3482423-3482518)
chr3 (96-193)||(55128790-55128885)
chr3 (96-203)||(20810362-20810467)
chr3 (96-203)||(53119517-53119622)
chr3 (31-165)||(25023859-25023993)
chr3 (25-201)||(10586111-10586286)
chr3 (96-208)||(38436991-38437101)
chr3 (95-196)||(758367-758467)
chr3 (95-196)||(3418989-3419089)
chr3 (95-196)||(14438694-14438794)
chr3 (95-196)||(23666122-23666222)
chr3 (95-196)||(24038370-24038470)
chr3 (95-196)||(29350234-29350334)
chr3 (95-196)||(39775727-39775827)
chr3 (32-207)||(1689896-1690069)
chr3 (96-204)||(30341844-30341950)
chr3 (33-201)||(31002689-31002854)
chr3 (96-203)||(21494302-21494408)
chr3 (96-203)||(26962049-26962154)
chr3 (95-196)||(3672580-3672680)
chr3 (95-196)||(3692612-3692712)
chr3 (115-204)||(10321431-10321518)
chr3 (95-196)||(18467219-18467319)
chr3 (95-196)||(20520048-20520148)
chr3 (134-211)||(6024101-6024177)
chr3 (95-196)||(7571217-7571317)
chr3 (96-201)||(45904449-45904552)
chr3 (95-196)||(49971423-49971523)
chr3 (146-194)||(25726843-25726890)
chr3 (95-196)||(3033638-3033738)
chr3 (95-192)||(8883168-8883264)
chr3 (95-196)||(18472002-18472101)
chr3 (157-210)||(53358225-53358277)
chr3 (93-201)||(45904902-45905008)
[»] chr2 (32 HSPs)
chr2 (25-220)||(39542874-39543068)
chr2 (19-170)||(28945190-28945342)
chr2 (19-221)||(11658811-11659012)
chr2 (25-209)||(39542434-39542617)
chr2 (96-204)||(28751729-28751835)
chr2 (96-204)||(42723451-42723557)
chr2 (96-204)||(42728620-42728726)
chr2 (96-204)||(44096291-44096397)
chr2 (96-204)||(44754596-44754702)
chr2 (96-204)||(44759762-44759868)
chr2 (96-204)||(40518472-40518578)
chr2 (96-203)||(42914632-42914737)
chr2 (25-201)||(19538377-19538552)
chr2 (33-201)||(6297823-6297989)
chr2 (91-203)||(5089268-5089378)
chr2 (95-196)||(10160723-10160823)
chr2 (96-169)||(40392342-40392414)
chr2 (95-195)||(30658260-30658359)
chr2 (119-201)||(28854996-28855077)
chr2 (95-196)||(1934992-1935092)
chr2 (132-220)||(22844791-22844878)
chr2 (148-244)||(29907416-29907510)
chr2 (96-143)||(17327455-17327502)
chr2 (95-196)||(25497324-25497424)
chr2 (19-115)||(27556640-27556737)
chr2 (95-196)||(30650925-30651025)
chr2 (95-194)||(18344429-18344527)
chr2 (98-196)||(29677377-29677474)
chr2 (95-196)||(7737850-7737950)
chr2 (95-196)||(19578413-19578513)
chr2 (95-196)||(25478296-25478396)
chr2 (120-169)||(44683173-44683222)
[»] scaffold0014 (2 HSPs)
scaffold0014 (96-204)||(31534-31640)
scaffold0014 (96-204)||(26362-26468)
[»] chr7 (37 HSPs)
chr7 (96-204)||(16539412-16539518)
chr7 (96-204)||(16626144-16626250)
chr7 (96-204)||(42571934-42572040)
chr7 (96-203)||(47177119-47177224)
chr7 (93-203)||(9973452-9973560)
chr7 (96-204)||(12934387-12934492)
chr7 (96-204)||(33237991-33238097)
chr7 (96-204)||(47998964-47999070)
chr7 (31-201)||(19640290-19640458)
chr7 (96-204)||(21081039-21081147)
chr7 (96-204)||(2234630-2234736)
chr7 (96-204)||(17495392-17495498)
chr7 (96-204)||(17557716-17557822)
chr7 (96-204)||(32212654-32212760)
chr7 (96-204)||(33243168-33243274)
chr7 (96-204)||(47993789-47993895)
chr7 (96-203)||(43892848-43892953)
chr7 (20-245)||(7875017-7875247)
chr7 (99-203)||(28292506-28292607)
chr7 (96-203)||(24528344-24528449)
chr7 (25-201)||(27256234-27256409)
chr7 (96-204)||(19309611-19309716)
chr7 (96-191)||(33226416-33226509)
chr7 (126-204)||(22857717-22857793)
chr7 (27-169)||(24169968-24170110)
chr7 (95-196)||(4579504-4579604)
chr7 (95-202)||(8076040-8076146)
chr7 (95-196)||(9650966-9651066)
chr7 (95-196)||(26341195-26341295)
chr7 (95-195)||(23866065-23866164)
chr7 (95-202)||(12254069-12254175)
chr7 (95-194)||(23246932-23247030)
chr7 (146-196)||(16372394-16372443)
chr7 (95-196)||(13314235-13314335)
chr7 (188-221)||(19640225-19640258)
chr7 (25-70)||(20932642-20932687)
chr7 (25-61)||(19687172-19687208)
[»] chr1 (32 HSPs)
chr1 (96-204)||(11251113-11251219)
chr1 (96-204)||(34318224-34318330)
chr1 (96-204)||(37404416-37404522)
chr1 (93-201)||(10106095-10106201)
chr1 (96-204)||(36684715-36684821)
chr1 (96-204)||(37409537-37409643)
chr1 (25-201)||(33055030-33055205)
chr1 (96-204)||(3584590-3584696)
chr1 (94-226)||(25188270-25188401)
chr1 (96-204)||(27716432-27716538)
chr1 (96-203)||(38734265-38734370)
chr1 (96-193)||(5724979-5725074)
chr1 (96-204)||(5730094-5730200)
chr1 (112-204)||(11387846-11387936)
chr1 (96-201)||(13890805-13890908)
chr1 (96-203)||(5602425-5602530)
chr1 (95-196)||(10135452-10135552)
chr1 (25-201)||(41097880-41098055)
chr1 (96-169)||(48246683-48246755)
chr1 (19-221)||(14724219-14724422)
chr1 (25-196)||(4632855-4633025)
chr1 (25-198)||(8267758-8267931)
chr1 (96-203)||(26651166-26651271)
chr1 (96-203)||(39747165-39747270)
chr1 (96-203)||(14582089-14582194)
chr1 (112-178)||(27711319-27711383)
chr1 (95-196)||(40165976-40166076)
chr1 (95-196)||(18784548-18784647)
chr1 (95-196)||(23192816-23192916)
chr1 (95-195)||(51041462-51041559)
chr1 (95-196)||(19799012-19799112)
chr1 (95-196)||(47451224-47451324)
[»] scaffold0166 (2 HSPs)
scaffold0166 (96-203)||(13740-13845)
scaffold0166 (110-210)||(19212-19310)
[»] scaffold0067 (1 HSPs)
scaffold0067 (44-203)||(33917-34074)
[»] scaffold0594 (1 HSPs)
scaffold0594 (96-204)||(9208-9314)
[»] scaffold0517 (1 HSPs)
scaffold0517 (96-204)||(3552-3658)
[»] scaffold0055 (1 HSPs)
scaffold0055 (96-204)||(3047-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (96-204)||(81382-81488)
[»] chr8 (31 HSPs)
chr8 (96-204)||(17955789-17955895)
chr8 (96-204)||(21644081-21644187)
chr8 (96-204)||(42514374-42514480)
chr8 (96-204)||(32015689-32015795)
chr8 (96-203)||(19430004-19430109)
chr8 (96-203)||(19435506-19435611)
chr8 (96-203)||(19566153-19566258)
chr8 (96-203)||(19571655-19571760)
chr8 (96-203)||(33616727-33616832)
chr8 (98-204)||(24884701-24884805)
chr8 (96-204)||(43999230-43999336)
chr8 (96-203)||(31030518-31030623)
chr8 (96-203)||(13584340-13584453)
chr8 (93-221)||(33847991-33848117)
chr8 (74-197)||(37771707-37771828)
chr8 (95-196)||(18876366-18876465)
chr8 (95-196)||(19166630-19166730)
chr8 (95-196)||(31449865-31449965)
chr8 (143-204)||(32010527-32010587)
chr8 (25-197)||(34818627-34818798)
chr8 (95-196)||(38182236-38182336)
chr8 (95-196)||(44925922-44926022)
chr8 (95-196)||(40125884-40125984)
chr8 (95-194)||(15875667-15875765)
chr8 (96-198)||(25367993-25368093)
chr8 (95-196)||(17025931-17026031)
chr8 (95-196)||(17556423-17556523)
chr8 (95-196)||(17953872-17953972)
chr8 (95-196)||(33416543-33416643)
chr8 (95-196)||(34118462-34118562)
chr8 (95-140)||(43302717-43302762)
[»] scaffold0060 (1 HSPs)
scaffold0060 (96-204)||(36999-37105)
[»] scaffold0027 (1 HSPs)
scaffold0027 (19-221)||(43070-43277)
[»] scaffold0011 (2 HSPs)
scaffold0011 (96-208)||(1550-1660)
scaffold0011 (96-203)||(7036-7141)
[»] scaffold0132 (2 HSPs)
scaffold0132 (96-203)||(2772-2877)
scaffold0132 (96-203)||(10732-10837)
[»] scaffold0352 (1 HSPs)
scaffold0352 (95-196)||(7100-7200)
[»] scaffold0182 (1 HSPs)
scaffold0182 (95-196)||(9886-9986)
[»] scaffold0020 (1 HSPs)
scaffold0020 (25-197)||(1154-1325)
[»] scaffold0061 (1 HSPs)
scaffold0061 (31-201)||(45776-45944)
[»] scaffold0017 (1 HSPs)
scaffold0017 (31-201)||(152843-153011)
[»] scaffold0002 (1 HSPs)
scaffold0002 (95-196)||(4070-4170)
[»] scaffold0045 (1 HSPs)
scaffold0045 (95-196)||(83062-83162)
[»] scaffold0012 (1 HSPs)
scaffold0012 (95-196)||(166085-166185)


Alignment Details
Target: chr5 (Bit Score: 403; Significance: 0; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 19 - 478
Target Start/End: Complemental strand, 28858035 - 28857574
Alignment:
Q  19 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28858035 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgtg 28857936  T
Q  119 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28857935 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgat 28857836  T
Q  219 ttctttttcaaaatggtacgtttctagtaaaaactcacacatatgcggatgagttgatattcgaatctcaatcacgatatccaaccaa--nnnnnnnnnn 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||                
T  28857835 ttctttttcaaaatggtacgtttctagtaaaaactcacacatatgcggatgagttgatattcgaatctcaatcacgatatccgaccaatttttttttttt 28857736  T
Q  317 nnacatttttatcggttgagttaagatttttgacggacttatcacacaaatgaagaagccaagaaggtgcttggtccaataccgtgacaaacactatttt 416  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28857735 ttacatttttatcggttgagttaagatttttgacggacttatcacacaaatgaagaagccaagaaggtgcttggtccaataccgtgacaaacactatttt 28857636  T
Q  417 gtttctctattcattcatccactcaggtctcaatcaactctcagcaaccatatgtcacaggt 478  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28857635 gtttctctattcattcatccactcaagtctcaatcaactctcagcaaccatatgtcacaggt 28857574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 31986900 - 31986714
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||||||||||  |||| |||||||||||||  ||||||||| | |||||| |||||||||| |  | |||||||||||||||||||| |||||||||    
T  31986900 gattaaaccatatcagaggatgttatttctcgatcgattacttacggtgcagtacgtaatcgaacaagtgaactaggttgttttatcctgaaggcggcgc 31986801  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatat 205  Q
      |||||  ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||| |  ||||||||||||||| ||||||    
T  31986800 aattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtctt-aaagaaagcgaccttatcgtgactcaacccgataatat 31986714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 24771354 - 24771469
Alignment:
Q  93 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  24771354 ggttgttttatcctggagacggcgcggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacatctt-aaagaaagcgacctggtcgtgactc 24771451  T
Q  193 aacccggtaatatcttcg 210  Q
    | ||||||||||| ||||    
T  24771452 atcccggtaatattttcg 24771469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 36253921 - 36253815
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| |||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 36253824  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  36253823 ccggtaata 36253815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 17510153 - 17510048
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 17510056  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  17510055 ccggtaat 17510048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 42019668 - 42019562
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || |||| |||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  42019668 tgttttatcctggagacggcacggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 42019571  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  42019570 ccggtaata 42019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 17505048 - 17504942
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || || |||||||| | ||||||||||||||| || |||||||||||||||||||||| ||||||| |||| ||||||||||||| |    
T  17505048 tgttttatcctggagacgacgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtctt-aaagaaaacgacctggtcgtgactcacc 17504951  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  17504950 ccggtaata 17504942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 1414049 - 1414157
Alignment:
Q  94 gttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 193  Q
    ||||||||||| || || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| || ||||||||||    
T  1414049 gttgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctgatcgtgactca 1414146  T
Q  194 acccggtaata 204  Q
     ||| ||||||    
T  1414147 ccccagtaata 1414157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 13582690 - 13582793
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||| |  ||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 13582787  T
Q  196 ccggta 201  Q
    ||||||    
T  13582788 ccggta 13582793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 14374230 - 14374127
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||| ||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 14374133  T
Q  196 ccggta 201  Q
    ||||||    
T  14374132 ccggta 14374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 26709199 - 26709091
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||| ||  | |||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  26709199 tgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 26709101  T
Q  195 cccggtaata 204  Q
    ||||||||||    
T  26709100 cccggtaata 26709091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 26978933 - 26978825
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||| ||  | |||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  26978933 tgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 26978835  T
Q  195 cccggtaata 204  Q
    ||||||||||    
T  26978834 cccggtaata 26978825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 24776829 - 24776927
Alignment:
Q  110 ggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 209  Q
    |||| |||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||| |||    
T  24776829 ggcgccgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacatggtcgtgactcaccccagtaatattttc 24776926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 41858688 - 41858583
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| ||||||||||| |||||||||| |||||||||||| || ||||||||| ||    
T  41858688 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgtgaaacgtctt-aaagaaagcgacctgatcgtgactc-ac 41858592  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  41858591 ccggtaata 41858583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 7805166 - 7805066
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| || ||| |||||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagggacctggtcgtgactcaac 7805069  T
Q  196 ccg 198  Q
    |||    
T  7805068 ccg 7805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 24435869 - 24435972
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||| | ||||||||||||| ||||  | ||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcac-aacttggatagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 24435966  T
Q  196 ccggta 201  Q
    ||||||    
T  24435967 ccggta 24435972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 31731710 - 31731535
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  31731710 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 31731612  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | |||||||||||||||  || |||||||||  ||   |||||||| ||||||||| |||||||||||||||||||||    
T  31731611 tagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 31731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 37248794 - 37248894
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  | |||||||||| ||||| ||||| ||||| |||||| ||||||||||||||    
T  37248794 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtctt-aaagagagcgacctggtcgtgactcaa 37248892  T
Q  195 cc 196  Q
    ||    
T  37248893 cc 37248894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 41853627 - 41853538
Alignment:
Q  112 cggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 204  Q
    ||||||||||| | |||||| |||||||| || |||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  41853627 cggcgcggttgctagtctactttgcacaa-cttaggtagtgtcgcgaaacgtcttaaa-gaaagcgacctggtcgtgactc-acccggtaata 41853538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 201
Target Start/End: Original strand, 21323894 - 21324069
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  21323894 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 21323992  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | |||||||||||||||  || | |||||||| ||   |||||||| ||||||||| ||||| |||||||||||||||    
T  21323993 tagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaa-gaaagcgacctggtcatgactcaacccggta 21324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 26667368 - 26667268
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  26667368 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 26667270  T
Q  195 cc 196  Q
    ||    
T  26667269 cc 26667268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 26938965 - 26938865
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  26938965 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 26938867  T
Q  195 cc 196  Q
    ||    
T  26938866 cc 26938865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 29167972 - 29168072
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  29167972 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 29168070  T
Q  195 cc 196  Q
    ||    
T  29168071 cc 29168072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 10759819 - 10759918
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| | ||||||||||||||  |||||| ||||||||||||||    
T  10759819 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaaag--agcgacctggtcgtgactcaa 10759916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 556791 - 556691
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| | ||||||||| ||||| |||||| ||||||||||||||    
T  556791 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtctt-aaagagagcgacctggtcgtgactcaa 556693  T
Q  195 cc 196  Q
    ||    
T  556692 cc 556691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 561563 - 561463
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| | ||||||||| ||||| |||||| ||||||||||||||    
T  561563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtctt-aaagagagcgacctggtcgtgactcaa 561465  T
Q  195 cc 196  Q
    ||    
T  561464 cc 561463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 1430011 - 1430107
Alignment:
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttc 221  Q
    ||||||||||||||||||||| | || || || |||||||||| ||||||| |||| | ||||| ||||||||  ||||||||||| | |||||||||    
T  1430011 tggtctaccttgcacaaactcggatattgtcgtgaaacgtctt-aaagaaaacgacatagtcgtaactcaaccaagtaatatcttcagtggtgatttc 1430107  T

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Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 6514600 - 6514700
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||| ||  |  || |||||| ||||||||||| ||||| || ||||||||||||||||||    
T  6514600 ttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtctt-aaagagagtgacttggtcgtgactcaa 6514698  T
Q  195 cc 196  Q
    ||    
T  6514699 cc 6514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 12103121 - 12103021
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||| ||||||    
T  12103121 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtaactcaa 12103023  T
Q  195 cc 196  Q
    ||    
T  12103022 cc 12103021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 36423733 - 36423633
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||| ||| |||||||| ||||| | |||| ||||||||||  |  || |||||||||||||||||| ||||| |||||| |||||| |||||||    
T  36423733 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtctt-aaagagagcgacctggtcgcgactcaa 36423635  T
Q  195 cc 196  Q
    ||    
T  36423634 cc 36423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 36428805 - 36428705
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||| |||| ||||||||| ||||| |||||| ||||||||||||||    
T  36428805 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtctt-aaagagagcgacctggtcgtgactcaa 36428707  T
Q  195 cc 196  Q
    ||    
T  36428706 cc 36428705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 36937510 - 36937610
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  36937510 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 36937608  T
Q  195 cc 196  Q
    ||    
T  36937609 cc 36937610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 36942264 - 36942364
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  36942264 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 36942362  T
Q  195 cc 196  Q
    ||    
T  36942363 cc 36942364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 1429929 - 1429979
Alignment:
Q  31 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaa 81  Q
    ||||||||||||||||||||||||||| ||||| |||| | ||||||||||    
T  1429929 ttgagggtgttatttctcgaatgattatttatggtgcattacgtaatcgaa 1429979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 13301486 - 13301589
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||||  | |||||||| |||||||||||||||  |  |||||||||| ||   |||||||| ||||||||| |||||||||||||||    
T  13301486 tgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaac 13301583  T
Q  196 ccggta 201  Q
    | ||||    
T  13301584 ctggta 13301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 39518506 - 39518406
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| || |||||||  |  ||  ||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  39518506 ttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 39518408  T
Q  195 cc 196  Q
    ||    
T  39518407 cc 39518406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 39523145 - 39523045
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  ||  ||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  39523145 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 39523047  T
Q  195 cc 196  Q
    ||    
T  39523046 cc 39523045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 42001530 - 42001430
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  ||| |||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  42001530 ttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 42001432  T
Q  195 cc 196  Q
    ||    
T  42001431 cc 42001430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 32461548 - 32461647
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| | ||||||||| ||||| |||||| ||||||||||||||    
T  32461548 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtctt-aaagagagcgacctggtcgtgactcaa 32461646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 36949129 - 36949083
Alignment:
Q  175 gcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttc 221  Q
    ||||| |||||||||||||| ||| |||||||||||| |||||||||    
T  36949129 gcgacctggtcgtgactcaatccgataatatcttcggtggtgatttc 36949083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 12045138 - 12045238
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||| | | ||||  |||||||||  |  || |||||| ||||||||||| |||||  ||||| ||||||||||||||    
T  12045138 ttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagggcgacctggtcgtgactcaa 12045236  T
Q  195 cc 196  Q
    ||    
T  12045237 cc 12045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 12501898 - 12501998
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||   ||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||| ||||||||    
T  12501898 ttgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcatgactcaa 12501996  T
Q  195 cc 196  Q
    ||    
T  12501997 cc 12501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 36949272 - 36949148
Alignment:
Q  18 agattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 116  Q
    ||||||||||||||| ||||||||||||||||||| ||||| ||| | || ||  |||||| ||| |  | || |  ||||||||||| |  |||| | |    
T  36949272 agattaaaccatatttgagggtgttatttctcgaacgattatttacggtgtagcacgtaattgaacatgtgaattgagttgttttatcttagaggc-gtg 36949174  T
Q  117 cggttgttggtctaccttgcacaaac 142  Q
    |||||||| |||||||||||||||||    
T  36949173 cggttgttagtctaccttgcacaaac 36949148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 41996761 - 41996661
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  ||| |||||  |  || |||||| ||||||||||| ||||| ||| || ||||||||||||||    
T  41996761 ttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtctt-aaagagagcaacctggtcgtgactcaa 41996663  T
Q  195 cc 196  Q
    ||    
T  41996662 cc 41996661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 34644730 - 34644524
Alignment:
Q  19 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 118  Q
    ||||||||||||||||||||||||||||||||| | ||||||| | |||||| |||||||||| || | | ||  | |||||||||||||||||||||||    
T  34644730 gattaaaccatattgagggtgttatttctcgaacggttacttacggtgcagtacgtaatcgaacaggtgagctgagctgttttatcctgtaggcggcgcg 34644631  T
Q  119 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgat 218  Q
    |||||| || |||||| ||||||||| | ||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||||||||| ||| ||    
T  34644630 gttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtctt-aaagaaagcgacatgatcgtgactcaacccggtaatatcttcggtggtaat 34644532  T
Q  219 ttcttttt 226  Q
    ||||||||    
T  34644531 ttcttttt 34644524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 17359705 - 17359520
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||||||||||| || |||||| |||||||||||||||| || | |||| | |||||||||| || | |||| |||||||| |||||| ||| |||||    
T  17359705 gattaaaccatatttgaaggtgttgtttctcgaatgattacatacggtgcaatacgtaatcgaacaggtgaactgggttgtttaatcctggaggtggcgc 17359606  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 209  Q
     |||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||||||     ||||||||||||||||||||||||||    
T  17359605 agttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtctt-aaagaaagcga-----tcgtgactcaacccggtaatatcttc 17359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 8980285 - 8980391
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 8980382  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  8980383 ccggtaata 8980391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 8985405 - 8985511
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 8985502  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  8985503 ccggtaata 8985511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 13695260 - 13695142
Alignment:
Q  90 ctaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtga 189  Q
    ||||| |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||| ||||||| ||||||||| |||||||||    
T  13695260 ctaggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacatcttaaa-gaaagcgacctggtcgtga 13695163  T
Q  190 ctcaacccggtaatatcttcg 210  Q
    |||| ||||||||||| ||||    
T  13695162 ctcaccccggtaatattttcg 13695142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 13700605 - 13700499
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 13700508  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  13700507 ccggtaata 13700499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 21299833 - 21299939
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 21299930  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  21299931 ccggtaata 21299939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 41393340 - 41393234
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 41393243  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  41393242 ccggtaata 41393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 51019373 - 51019479
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 51019470  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  51019471 ccggtaata 51019479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 54991581 - 54991475
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 54991484  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  54991483 ccggtaata 54991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 13710763 - 13710652
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  13710763 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgac-tggtcgtgactcacc 13710667  T
Q  196 ccggtaatatcttcg 210  Q
    |||||||||| ||||    
T  13710666 ccggtaatattttcg 13710652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 21304953 - 21305059
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||| ||||| |||||||||||| ||||||||||||| |    
T  21304953 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaaagtctt-aaagaaagcgacctggtcgtgactcacc 21305050  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  21305051 ccggtaata 21305059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 36359389 - 36359283
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 36359292  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  36359291 ccggtaata 36359283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 39999164 - 39999058
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 39999067  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  39999066 ccggtaata 39999058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 40004122 - 40004016
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 40004025  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  40004024 ccggtaata 40004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 53797724 - 53797618
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | |||||||||||||||  | ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 53797627  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  53797626 ccggtaata 53797618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 54343298 - 54343192
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    ||||||||||||||| ||||||||||| | ||||||||||||| || || ||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  54343298 tgttttatcctgtagacggcgcggttgctagtctaccttgcac-aattcgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 54343201  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  54343200 ccggtaata 54343192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 54348452 - 54348346
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 54348355  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  54348354 ccggtaata 54348346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 47046307 - 47046412
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||| |||| ||||||||||||| |    
T  47046307 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaaacgacctggtcgtgactcacc 47046404  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  47046405 ccggtaat 47046412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 36354271 - 36354165
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 36354174  T
Q  196 ccggtaata 204  Q
    ||| |||||    
T  36354173 ccgataata 36354165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 24490127 - 24490022
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||||    ||||| ||||||||||||| ||||| |||||  |||||||||||||||    
T  24490127 tgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtctt-aaagagagcgatctggtcgtgactcaac 24490029  T
Q  196 ccggtaa 202  Q
    |||||||    
T  24490028 ccggtaa 24490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 39319706 - 39319613
Alignment:
Q  117 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcgg 211  Q
    |||||||| |||||||||||||||||||  |||||| || |||||||||| |||||||||||| || |||||||||||||||||||| |||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtctt-aaagaaagcgacctgatcgtgactcaacccggtaatctcttcgg 39319613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 653138 - 653035
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||| |  ||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 653041  T
Q  196 ccggta 201  Q
    ||||||    
T  653040 ccggta 653035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 10120811 - 10120914
Alignment:
Q  98 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 197  Q
    |||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| || |||||||||||||     
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctgatcgtgactcaacct 10120908  T
Q  198 ggtaat 203  Q
    ||||||    
T  10120909 ggtaat 10120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 8083027 - 8083138
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    ||||||||| || |||||||||||||||| ||||||||||||| ||||  | |||||||| |||||||||| ||||| |||||| || |||||||| |||    
T  8083027 tgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtctt-aaagagagcgacctgatcgtgacttaac 8083125  T
Q  196 ccggtaatatctt 208  Q
     ||||||| ||||    
T  8083126 tcggtaatttctt 8083138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 210
Target Start/End: Original strand, 10318777 - 10318892
Alignment:
Q  94 gttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 193  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||||  | ||    ||||||| ||||| ||||| |||||| |||||||||||||    
T  10318777 gttgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtctt-aaagagagcgacatggtcgtgactca 10318875  T
Q  194 acccggtaatatcttcg 210  Q
    |||||||||| ||||||    
T  10318876 acccggtaatttcttcg 10318892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 31269130 - 31269030
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  | ||| |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  31269130 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 31269032  T
Q  195 cc 196  Q
    ||    
T  31269031 cc 31269030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 37259876 - 37259976
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |   |||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  37259876 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtctt-aaagaaagcgacctggtcgtgactcaa 37259974  T
Q  195 cc 196  Q
    ||    
T  37259975 cc 37259976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 3997995 - 3998155
Alignment:
Q  34 agggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctacct 133  Q
    |||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| ||||||||||||||| ||||  | |||||||| |||||| |    
T  3997995 agggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggttgttttatcctggaggc-acacggttgttagtctactt 3998093  T
Q  134 tgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 196  Q
    |||||||  || |||||||||| ||    |||| |||||||||||| ||||||||||||||||    
T  3998094 tgcacaatttcgggtagtgccgtgatttatctt-aaagaaagcgacctggtcgtgactcaacc 3998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 5271418 - 5271518
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  5271418 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 5271516  T
Q  195 cc 196  Q
    ||    
T  5271517 cc 5271518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 13521991 - 13522091
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  13521991 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 13522089  T
Q  195 cc 196  Q
    ||    
T  13522090 cc 13522091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 16421125 - 16421025
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||||||||||||| ||||| | |||| ||||||||||  |  || |||||| ||||| ||||| || || |||||| ||||||||||||||    
T  16421125 ttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctt-aatgagagcgacctggtcgtgactcaa 16421027  T
Q  195 cc 196  Q
    ||    
T  16421026 cc 16421025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 31273617 - 31273517
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  31273617 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 31273519  T
Q  195 cc 196  Q
    ||    
T  31273518 cc 31273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 37264563 - 37264663
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||| ||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  37264563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 37264661  T
Q  195 cc 196  Q
    ||    
T  37264662 cc 37264663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 41816951 - 41816776
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||||| ||||| ||||||   |||||||| || |||| | |  |||||||||||  ||||  | |||||||    
T  41816951 accatattagagggtgttatttctcgaacgattatttatggtgcagtatctaatcgaacaggtaaattggactgttttatcctagaggc-tcacggttgt 41816853  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | | |||||||||||||  || |||||||||| |    ||||| ||||||||| || || ||||||||||||||||||    
T  41816852 tagcctaccttgcacaatttcgggtagtgccgtggtttgtctt-aaagaaagcaacctgatcgtgactcaacccggta 41816776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 9764021 - 9764115
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    |||||||||||  || ||| ||||||||| ||||||||||||| |||| |||||||||| |||||| |||| |||| | ||||| ||||||||||||    
T  9764021 tgttttatcctagagacggtgcggttgttagtctaccttgcac-aacttaggtagtgccacgaaacatctt-aaagtaggcgacctggtcgtgactc 9764115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 30564414 - 30564485
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtctta 167  Q
    |||||||||||  ||||||| |  ||||| |||||||||||||||| |  ||||||||||||||||||||||    
T  30564414 tgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtctta 30564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 19725012 - 19724951
Alignment:
Q  20 attaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaa 81  Q
    ||||||||||||| | |||||||||||||||| |||||| || | |||||| ||||||||||    
T  19725012 attaaaccatattaaaggtgttatttctcgaacgattacatacggtgcagtacgtaatcgaa 19724951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 31765982 - 31765882
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| || ||| |||| |||||||||    
T  31765982 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagtgacctggttgtgactcaa 31765884  T
Q  195 cc 196  Q
    ||    
T  31765883 cc 31765882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 3258285 - 3258161
Alignment:
Q  20 attaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcgg 119  Q
    ||||||||||||||| ||||||||||||||||  |||||||| | |  | | | |||||| | || | ||||  ||||||||||| |  |||| || |||    
T  3258285 attaaaccatattgatggtgttatttctcgaacaattacttacggtataatacataatcgtacaggtgaactgagttgttttatcttagaggcagcacgg 3258186  T
Q  120 ttgttggtctaccttgcacaaactc 144  Q
    ||||| ||||||| |||||||||||    
T  3258185 ttgttagtctaccatgcacaaactc 3258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 34560568 - 34560489
Alignment:
Q  121 tgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    |||| |||||||||||| ||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  34560568 tgttagtctaccttgcataatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 34560489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 31298385 - 31298466
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgac 179  Q
    |||||||||||| ||||| | | |||||| |||||||||||||||||||  |||||| |  |||||||||| ||||||||||||    
T  31298385 tgttttatcctggaggcg-cacagttgttagtctaccttgcacaaactcgagtagtgtcatgaaacgtctt-aaagaaagcgac 31298466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 31729386 - 31729460
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
    ||||||||||||| |||||||| | ||| | |||| ||||||||||  |  ||||||||| ||||||||||||||    
T  31729386 ttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaa 31729460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 55251815 - 55251716
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| ||| |||| ||||| | ||||  |||||||||  |  |  |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  55251815 ttgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaaag--agcgacctggtcgtgactcaa 55251718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 8693807 - 8693707
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||  |||||||| ||||| | || |  |||||||||  |  ||||| ||| |||||||||||||| || |||||| ||||||||||||||    
T  8693807 ttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 8693709  T
Q  195 cc 196  Q
    ||    
T  8693708 cc 8693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 195
Target Start/End: Original strand, 30255530 - 30255679
Alignment:
Q  46 ctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactca 145  Q
    |||||| ||||||||| | |||||| | ||||||||  | | ||||  |||||||||  ||| || |||||| |||||| |||| | |||||||||||      
T  30255530 ctcgaacgattacttacggtgcagtacttaatcgaactggtgaactgtgttgttttagtctgaagacggcgcagttgttagtcttctttgcacaaacttg 30255629  T
Q  146 ggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
     |||||| | |||||||| ||||||||| ||||  ||  |||||||||||    
T  30255630 agtagtgtcacgaaacgttttaaaagaatgcgatatgaccgtgactcaac 30255679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 10642883 - 10642692
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||| | |||||| |||||||||| |  | |||| || |||||||||| | |||||||||    
T  10642883 gattaaaccatatttgagggtgttatttctggaacgattacttacggtgcagtacgtaatcgaacaagtgaactgggatgttttatccgggaggcggcgc 10642784  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 210  Q
    ||||||| ||||||||||||||| ||| | ||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  10642783 ggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtctt-aaagaaagcgacattgtcgtgactcaacccggtaatatcttcg 10642692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 24192480 - 24192591
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  24192480 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 24192577  T
Q  196 ccggtaatatcttc 209  Q
    ||||||||| ||||    
T  24192578 ccggtaatagcttc 24192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 29491237 - 29491343
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  29491237 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacttggtcgtgactcacc 29491334  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  29491335 ccggtaata 29491343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 5600896 - 5601081
Alignment:
Q  23 aaaccatatt-gagggtgttatttctcgaatgattacttatgttgc--agtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcgg 119  Q
    |||||||||| ||||||||||||||||||| ||||| ||| | |||  ||| |||||||||| |  | || | |  ||||||||| || |||||||||||    
T  5600896 aaaccatatttgagggtgttatttctcgaacgattagttacggtgcgcagtacgtaatcgaacatgtgaattggactgttttatcttggaggcggcgcgg 5600995  T
Q  120 ttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatc 206  Q
    |||||  |||||||| ||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||| | |||||||    
T  5600996 ttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtctt-aaagaaagcgacctggtcgtgactcaacctgataatatc 5601081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 24191383 - 24191494
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||  | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  24191383 tgttttatcctggagacggcgcggttactagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 24191480  T
Q  196 ccggtaatatcttc 209  Q
    ||||||||| ||||    
T  24191481 ccggtaatagcttc 24191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 21396794 - 21396688
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||  |||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  21396794 tgttttatcctggagatggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 21396697  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  21396696 ccggtaata 21396688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 22698243 - 22698349
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 22698340  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  22698341 ccggtaata 22698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 31981655 - 31981550
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 31981558  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  31981557 ccggtaat 31981550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 3902006 - 3901902
Alignment:
Q  98 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 197  Q
    |||||||||| |||||||||||||| |  |||||||||||||||||  | ||||||||| ||||||||| ||||| |||||| |||||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtctt-aaagagagcgacctggtcgtgactcaaccc 3901908  T
Q  198 ggtaat 203  Q
    ||||||    
T  3901907 ggtaat 3901902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 12183000 - 12183099
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||| ||| ||||| |||||||||| |||||| |||||||||||  ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaac 12183098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 17281563 - 17281669
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  |||||  ||||||||| ||||||||| ||||||  | ||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  17281563 tgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtctt-aaagaaagcgacatgctcgtgactcaac 17281661  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  17281662 ccggtaat 17281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 19478243 - 19478138
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    ||||||||| || || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19478243 tgttttatcgtggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19478146  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  19478145 ccggtaat 19478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 21401844 - 21401744
Alignment:
Q  102 atcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    |||||| || ||||||||||| | ||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcatcccggta 21401747  T
Q  202 ata 204  Q
    |||    
T  21401746 ata 21401744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 22713867 - 22713717
Alignment:
Q  19 gattaaaccatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 118  Q
    |||||||||||||||||| |||||||| ||||| ||||||||| | |||| | |||||| ||| |  | ||||  | | |||||||||| ||| ||||||    
T  22713867 gattaaaccatattgaggatgttatttttcgaacgattacttacggtgcaatacgtaattgaacaagtgaactgagctattttatcctgaaggtggcgcg 22713768  T
Q  119 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
    |||||| ||||| |||||||||||||  ||||||| || ||||||||||||    
T  22713767 gttgttagtctatcttgcacaaactcgagtagtgctgcaaaacgtcttaaa 22713717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 22703366 - 22703472
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||| |||| |  |||||||||| |    
T  22703366 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaaacgacataatcgtgactcacc 22703463  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  22703464 ccggtaata 22703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 13605092 - 13605197
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| ||| || | |||||||||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcaacctagtcgtgactcaac 13605189  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  13605190 ccggtaat 13605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 34142175 - 34142071
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| ||||  ||||| ||| ||||||||||| |||||||||||| ||||||||||||| |    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 34142078  T
Q  196 ccggtaa 202  Q
    |||||||    
T  34142077 ccggtaa 34142071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 34154791 - 34154687
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| ||||  ||||| ||| ||||||||||| |||||||||||| ||||||||||||| |    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 34154694  T
Q  196 ccggtaa 202  Q
    |||||||    
T  34154693 ccggtaa 34154687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 29325629 - 29325525
Alignment:
Q  98 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 197  Q
    ||||||| || ||||| | | |||||| |||||||||||||||||| |||||||| ||  ||||||||||||| | ||||||||| ||||||||||||||    
T  29325629 ttttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaa-agagcgacttgatcgtgactcaaccc 29325531  T
Q  198 ggtaat 203  Q
    ||||||    
T  29325530 ggtaat 29325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 34376014 - 34375908
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| |  ||||| |||||||| || |||||||||||||||||||||| |||||||||||| || |||||||||| |    
T  34376014 tgttttatcctggagacggcgcggttgctaatctacgttgcacaa-cttaggtagtgccgcgaaacgtctt-aaagaaagcgacctgatcgtgactcacc 34375917  T
Q  196 ccggtaata 204  Q
    ||| |||||    
T  34375916 ccgataata 34375908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 2818147 - 2818253
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||  | ||||||||||||| |||| |||||||  ||| ||||||||| |||||||||||| ||||||||| ||| |    
T  2818147 tgttttatcctggagacggcgcggtttctagtctaccttgcac-aacttaggtagtaacgcaaaacgtctt-aaagaaagcgacctggtcgtgattcacc 2818244  T
Q  196 ccggtaata 204  Q
     ||||||||    
T  2818245 tcggtaata 2818253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 11570748 - 11570848
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| |||| |||||||||    
T  11570748 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggttgtgactcaa 11570846  T
Q  195 cc 196  Q
    ||    
T  11570847 cc 11570848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 5740804 - 5740901
Alignment:
Q  110 ggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatctt 208  Q
    ||||||||||||| | ||| ||||||||||||||   |||||| || |||||||||| ||||| || ||| | ||| ||||||||||||||||| ||||    
T  5740804 ggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtctt-aaagagagtgacctagtcatgactcaacccggtaatctctt 5740901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 17964558 - 17964632
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  | ||||||| ||||||||||||||    
T  17964558 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaa 17964632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 6112973 - 6113072
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||||| | ||||| || |||||||||||||||  ||||||| || || ||  ||||||||| |||||| || || ||||||||||||    
T  6112973 tgttttatcctggaggcg-cacggttattagtctaccttgcacaatttcaggtaatgtcgtgattcgtcttaaa-gaaagcaacctgatcgtgactcaac 6113070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 6728397 - 6728440
Alignment:
Q  159 aacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaat 203  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||    
T  6728397 aacgtcttaaa-gaaagcgacctggtcgtgactcaccccggtaat 6728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 7e-44; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 27605064 - 27605261
Alignment:
Q  25 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 124  Q
    ||||||||||||||||||||||||||||||||||||| | |||| | | |||||||| || | ||| | | |||||||||||  |||||| |  ||||||    
T  27605064 accatattgagggtgttatttctcgaatgattacttacggtgcaatacataatcgaacaggtgaaccaagctgttttatcctagaggcggtgtagttgtt 27605163  T
Q  125 ggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttctt 223  Q
     ||||||||||||||||||| |||||||| |||||| ||||| ||||| ||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  27605164 agtctaccttgcacaaactcgggtagtgctgcgaaatgtctt-aaagagagcgacttggtcgtgactcaacctggtaatatattcgatggtgatttctt 27605261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 1688808 - 1689015
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||| || | ||||||  | |||||||||  | |||||||    
T  1688808 gattaaatcatatttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcgaacaggtgaactagactattttatcctaaacgcggcgc 1688907  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtga 217  Q
    | |||||  |||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||| ||| || |||||||||||| | |||    
T  1688908 gattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtctt-aaagaaagcgacctggtcgtgacttaactcgttaatatcttcggtgttga 1689006  T
Q  218 tttcttttt 226  Q
    |||| ||||    
T  1689007 tttcgtttt 1689015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 795327 - 795529
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||| || | |||| || |||||||||||| ||||||| |    
T  795327 gattaaaccatatttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcgaacaggtgaactgggctgttttatcctggaggcggcac 795426  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtga 217  Q
    ||||||| |||||||||||| |||||| || |||| || | |||||||| | | ||||||   ||||||||||||||||||||  ||||||||| |||||    
T  795427 ggttgttagtctaccttgcataaactctggcagtgtcgtgcaacgtctt-acataaagcggtctggtcgtgactcaacccggtcctatcttcggtggtga 795525  T
Q  218 tttc 221  Q
    ||||    
T  795526 tttc 795529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 2617177 - 2617369
Alignment:
Q  19 gattaaaccatattg--agggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 116  Q
    ||||||||||||||   || ||||||||||| ||| ||||||||| | ||| || | |||||||| ||    |||||  |||||||||||| ||||||||    
T  2617177 gattaaaccatatttttagagtgttatttctagaacgattacttacggtgcggtacataatcgaacaggcggactagactgttttatcctggaggcggcg 2617276  T
Q  117 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 210  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||    
T  2617277 cggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtctt-aaagaaagcgacatggttgtgactcaaccctgtaatatcttcg 2617369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 1741030 - 1741178
Alignment:
Q  19 gattaaaccatatt--gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcg 116  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||| | |||||| ||||||| || || | |||| ||||||||||||||| ||||||||    
T  1741030 gattaaaccatattttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcaaacaggtgaacttggttgttttatcctggaggcggcg 1741129  T
Q  117 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtct 165  Q
    ||||||||  | | |||||||||||||||||||||| ||||||||||||    
T  1741130 cggttgttaatttgccttgcacaaactcaggtagtgtcgcgaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 17368814 - 17368708
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 17368717  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  17368716 ccggtaata 17368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 3476946 - 3477051
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 3477043  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  3477044 ccggtaat 3477051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 17364160 - 17364052
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||| || ||||||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  17364160 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 17364062  T
Q  195 cccggtaata 204  Q
    ||||||||||    
T  17364061 cccggtaata 17364052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 20090662 - 20090768
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 20090759  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  20090760 ccggtaata 20090768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 20095787 - 20095893
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 20095884  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  20095885 ccggtaata 20095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 34129169 - 34129275
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcagc 34129266  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  34129267 ccggtaata 34129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 54270739 - 54270633
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || |||||||||||||||| |||||||| ||||||||| ||||||||||||| |    
T  54270739 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaatgtcttaaa-gaaagcgacctggtcgtgactcacc 54270642  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  54270641 ccggtaata 54270633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 23071488 - 23071681
Alignment:
Q  42 atttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaa 141  Q
    |||||||||| ||||| ||| | |||||| |||||||||| || |||| | |  | ||||||| || |||| || || ||||| || |||||| ||||||    
T  23071488 atttctcgaacgattatttaaggtgcagtacgtaatcgaacaggtaaaat-gactattttatcttggaggcagcacgtttgttagtataccttacacaaa 23071586  T
Q  142 ctcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttctttttcaaaatggtac 237  Q
    ||  |||| |||||| |||||||||||| |||| ||| |||||| |||||||||| | |||||||||||| ||||||||||||||||||| |||||    
T  23071587 cttgggtattgccgcaaaacgtcttaaa-gaaaacgatttggtcatgactcaacctgataatatcttcggtggtgatttctttttcaaaaaggtac 23071681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 26706951 - 26706808
Alignment:
Q  27 catattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgt---tttatcctgtaggcggcgcggttgt 123  Q
    |||||||||||||||||||||||||  ||||||||   ||||||||||||||||| || | |||| |  |||   ||||||||| ||||||||| |||||    
T  26706951 catattgagggtgttatttctcgaaccattacttacagtgcagtgcgtaatcgaacaggtgaactggactgtaattttatcctggaggcggcgcagttgt 26706852  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtctta 167  Q
    | ||||||||||||||||||  | |||||| |||||||||||||    
T  26706851 tagtctaccttgcacaaacttggatagtgctgcgaaacgtctta 26706808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 15763030 - 15763136
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |  |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  15763030 tgttttatcctggagacggcgcggttgctagtctaccttgcac-agttcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 15763127  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  15763128 ccggtaata 15763136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 33089343 - 33089448
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-ctagggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 33089440  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  33089441 ccggtaat 33089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 17357933 - 17357825
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||| || ||||||||||| | |||||||||||||| || | |||||||||||||||||||||| ||||||| |||| |||||||||||||     
T  17357933 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtctt-aaagaaatcgacctggtcgtgactcac 17357835  T
Q  195 cccggtaata 204  Q
    | ||||||||    
T  17357834 ctcggtaata 17357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 15768191 - 15768297
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |  |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  15768191 tgttttatcctggagacggcgcggttgctagtctaccttgcac-agttcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 15768288  T
Q  196 ccggtaata 204  Q
    || ||||||    
T  15768289 ccagtaata 15768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 13022122 - 13022017
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  |||||||||||||||||| |||||| | |||||| |||||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgttttaaaa-agagcgacctggtcgtgactcaac 13022025  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  13022024 ccgataat 13022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 23074427 - 23074549
Alignment:
Q  114 gcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggag 213  Q
    ||||| ||||| || |||||| ||||||||  |||| ||| || |||||||||||| ||||||||||||||| |||| || || | |||||||||||| |    
T  23074427 gcgcgtttgttagtataccttacacaaacttgggtattgctgcaaaacgtcttaaa-gaaagcgacttggtcatgacacagcctgataatatcttcggtg 23074525  T
Q  214 gtgatttctttttcaaaatggtac 237  Q
    |||||||||||||||||| |||||    
T  23074526 gtgatttctttttcaaaaaggtac 23074549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 4117600 - 4117712
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || | ||||||||| | ||||||||||||| |||| |||||||||||||||| ||||| || ||||||||| ||||||||||||| |    
T  4117600 tgttttatcctggagacagcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaatgtctt-aacgaaagcgacctggtcgtgactcacc 4117697  T
Q  196 ccggtaatatcttcg 210  Q
    || ||||||| ||||    
T  4117698 ccagtaatattttcg 4117712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 3482423 - 3482518
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 193  Q
    |||||||||||| || ||||||||||| | |||||||||||||||| | ||||| |||||||||| ||||| |||||||||||| |||||||||||||    
T  3482423 tgttttatcctggagacggcgcggttgctagtctaccttgcacaaa-ttaggtaatgccgcgaaaagtctt-aaagaaagcgacctggtcgtgactca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 55128885 - 55128790
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 193  Q
    |||||||||||| || ||||||||||| | ||||||||| ||||| || |||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  55128885 tgttttatcctggagacggcgcggttgctagtctaccttacacaa-cttaggtagtgccgcgaaacgtctt-aaagaaaacgacctggtcgtgactca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 20810467 - 20810362
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  |||||||| |||||||||||| ||||| | |||| |||||||||||||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgctgcgaaacgtctt-aaagagaacgacctggtcgtgactcaac 20810370  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  20810369 ccgataat 20810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 53119622 - 53119517
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  || ||||| ||||||| ||||||||||||| ||||   |||||||||||||||||||| ||||| |||||| || ||||||||||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgagtagtgccgcgaaacgtctt-aaagagagcgacctgatcgtgactcaac 53119525  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  53119524 ccggtaat 53119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 25023859 - 25023993
Alignment:
Q  31 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 130  Q
    ||||| ||||||||||| ||| ||||||||| | |||||| |||||||||| |  | || | || |  | ||||||| ||||||| |||||||| |||||    
T  25023859 ttgagtgtgttatttctagaacgattacttacggtgcagtacgtaatcgaacaagtgaattgggcttgtatatcctggaggcggcacggttgttagtcta 25023958  T
Q  131 ccttgcacaaactcaggtagtgccgcgaaacgtct 165  Q
    ||||||||||||| |||||||| || |||||||||    
T  25023959 ccttgcacaaactgaggtagtgtcgtgaaacgtct 25023993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 201
Target Start/End: Original strand, 10586111 - 10586286
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   | |||||| || | |||| || |||||||||||| ||||  | |||||||    
T  10586111 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttgatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 10586209  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  10586210 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 10586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 38436991 - 38437101
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||| ||| ||||  | ||||||| ||||||||||| |||||||| ||| || ||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcac-aacttggatagtgccacgaaacgtctt-aaagaaagtgacctgatcgtgactcaac 38437088  T
Q  196 ccggtaatatctt 208  Q
    |||||||| ||||    
T  38437089 ccggtaatttctt 38437101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 758367 - 758467
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  ||||||||| ||||||||||| ||||| |||||  ||||||||||||||    
T  758367 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtctt-aaagagagcgatctggtcgtgactcaa 758465  T
Q  195 cc 196  Q
    ||    
T  758466 cc 758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 3419089 - 3418989
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| ||| |||| ||||| | |||| ||||||||||  |  || |||||| |||||||||||||| || |||||||||||||||||||||    
T  3419089 ttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacttggtcgtgactcaa 3418991  T
Q  195 cc 196  Q
    ||    
T  3418990 cc 3418989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 14438694 - 14438794
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  ||||||||| ||||||||||| |||||  ||||| ||||||||||||||    
T  14438694 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtctt-aaagagggcgacctggtcgtgactcaa 14438792  T
Q  195 cc 196  Q
    ||    
T  14438793 cc 14438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 23666122 - 23666222
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  23666122 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 23666220  T
Q  195 cc 196  Q
    ||    
T  23666221 cc 23666222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 24038370 - 24038470
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  24038370 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 24038468  T
Q  195 cc 196  Q
    ||    
T  24038469 cc 24038470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 29350334 - 29350234
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||  ||| | |||||| ||||||||||  |  || |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  29350334 ttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gaaagcgacatggtcgtgactcaa 29350236  T
Q  195 cc 196  Q
    ||    
T  29350235 cc 29350234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 39775727 - 39775827
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  39775727 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 39775825  T
Q  195 cc 196  Q
    ||    
T  39775826 cc 39775827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 1689896 - 1690069
Alignment:
Q  32 tgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctac 131  Q
    ||||||||||||||||| || ||||||||| | |||||  |||||||||| || | |||  ||  ||||| ||  | ||| |||| || |||| ||||||    
T  1689896 tgagggtgttatttctcaaacgattacttacggtgcagcacgtaatcgaacaggtgaaccgggcagttttgtctaggaggtggcgtggatgttagtctac 1689995  T
Q  132 cttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatct 207  Q
     ||||||||||||   |||| || ||||||||||||||  ||| ||| |||||||| |||||||||| ||||||||    
T  1689996 tttgcacaaactcgaatagtaccacgaaacgtcttaaa--aaaacgatttggtcgtaactcaacccgataatatct 1690069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 30341844 - 30341950
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||  || ||||||| | ||||||||| |||||  | |||||||||||||||||||||| |||||||| ||| ||||||||||||| |    
T  30341844 tgttttatcctggagatggtgcggttgctagtctaccttacacaattt-aggtagtgccgcgaaacgtctt-aaagaaagtgacctggtcgtgactcacc 30341941  T
Q  196 ccggtaata 204  Q
    ||| |||||    
T  30341942 ccgataata 30341950  T

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Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 31002854 - 31002689
Alignment:
Q  33 gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctacc 132  Q
    ||||||||||||||||||| ||| |  |||| ||||||   ||||| || || | ||||||| |||||||||||| |||   | |||||||| |||||||    
T  31002854 gagggtgttatttctcgaacgatcatatatggtgcagtatttaatcaaacaggtgaactaggctgttttatcctggaggta-cacggttgttagtctacc 31002756  T
Q  133 ttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    ||||||||  || |||||||||| ||   ||||| |||||||||||| | |||||||||||||||||||    
T  31002755 ttgcacaatttcgggtagtgccgtgatttgtctt-aaagaaagcgacct-gtcgtgactcaacccggta 31002689  T

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Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 21494302 - 21494408
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||| | || ||||||||||||| ||||||||||||||||||  |||| || || || || |||| ||||| |||||| ||||||||||||||     
T  21494302 tgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatctt-aaagagagcgacctggtcgtgactcaat 21494400  T
Q  196 ccggtaat 203  Q
    || |||||    
T  21494401 ccagtaat 21494408  T

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Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 26962154 - 26962049
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| | ||||| ||||||||||||| ||||   |||||||| ||||||||||| ||||| |||||  |||||||||||||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcac-aacttgtgtagtgccacgaaacgtctt-aaagagagcgatctggtcgtgactcaac 26962057  T
Q  196 ccggtaat 203  Q
    || |||||    
T  26962056 ccagtaat 26962049  T

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Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 3672680 - 3672580
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  3672680 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 3672582  T
Q  195 cc 196  Q
    ||    
T  3672581 cc 3672580  T

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Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 3692712 - 3692612
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || ||||||  |||||||||| ||||| |||||| ||||||||||||||    
T  3692712 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtctt-aaagagagcgacctggtcgtgactcaa 3692614  T
Q  195 cc 196  Q
    ||    
T  3692613 cc 3692612  T

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Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 204
Target Start/End: Complemental strand, 10321518 - 10321431
Alignment:
Q  115 cgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 204  Q
    |||||||| | |||||||||||||||  | || ||||||||||||||||||| |||||||||||| ||||||||||| | || |||||||    
T  10321518 cgcggttgctagtctaccttgcacaatttaag-tagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactgatcctggtaata 10321431  T

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Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 18467319 - 18467219
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||  | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  18467319 ttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 18467221  T
Q  195 cc 196  Q
    ||    
T  18467220 cc 18467219  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 20520148 - 20520048
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| | |||| |||||||||| ||  || |||||| ||||||||||| ||||| || ||| ||||||||||||||    
T  20520148 ttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtctt-aaagagagtgacctggtcgtgactcaa 20520050  T
Q  195 cc 196  Q
    ||    
T  20520049 cc 20520048  T

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Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 6024177 - 6024101
Alignment:
Q  134 tgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcgg 211  Q
    ||||| |||| |||||||||||||||||||||||||| | || ||| ||||| ||| ||||||| ||||| |||||||    
T  6024177 tgcacgaacttaggtagtgccgcgaaacgtcttaaaa-agagagacctggtcatgaatcaacccagtaatctcttcgg 6024101  T

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Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 7571217 - 7571317
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| | ||| | ||||  |||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  7571217 ttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 7571315  T
Q  195 cc 196  Q
    ||    
T  7571316 cc 7571317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 45904449 - 45904552
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||||  | |||||||| |||||||||||||||  || |||||||| | ||   |||||||| |||| |||| |||||||||||||||    
T  45904449 tgttttatcctgaaggca-cacggttgttagtctaccttgcacaatttcgggtagtgctgtgatttgtcttaaa-gaaaacgacatggtcgtgactcaac 45904546  T
Q  196 ccggta 201  Q
    ||||||    
T  45904547 ccggta 45904552  T

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Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 49971423 - 49971523
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| | ||| | |||| ||||||||||  |  | ||||||| ||||||||||| ||||| | |||| ||||||||||||||    
T  49971423 ttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtctt-aaagagatcgacctggtcgtgactcaa 49971521  T
Q  195 cc 196  Q
    ||    
T  49971522 cc 49971523  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 25726843 - 25726890
Alignment:
Q  146 ggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  25726843 ggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaa 25726890  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 3033738 - 3033638
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||  |||||| | ||||| | |||| ||||||||||  |  || ||||||  ||||||||||||| || |||||| ||||||||||||||    
T  3033738 ttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 3033640  T
Q  195 cc 196  Q
    ||    
T  3033639 cc 3033638  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 8883264 - 8883168
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    ||||||||||||| |||| ||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||    
T  8883264 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactc 8883168  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 18472101 - 18472002
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  | ||| |||||| || ||| || | ||||| |||||| ||||||||||||||    
T  18472101 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgt-aaagagagcgacctggtcgtgactcaa 18472004  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 53358277 - 53358225
Alignment:
Q  157 gaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcg 210  Q
    ||||||||||||| ||||||||| ||| |||||||||||||  |||||||||||    
T  53358277 gaaacgtcttaaa-gaaagcgacctggccgtgactcaacccattaatatcttcg 53358225  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 45904902 - 45905008
Alignment:
Q  93 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    ||||||||||||||| ||||  | |||||||| ||||||| |||||||  || |||||||| | ||   |||||||| ||||||||| ||||||| ||||    
T  45904902 ggttgttttatcctggaggca-cacggttgttagtctaccctgcacaatttcgggtagtgctgtgatttgtcttaaa-gaaagcgacatggtcgtaactc 45904999  T
Q  193 aacccggta 201  Q
    || ||||||    
T  45905000 aatccggta 45905008  T

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Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 39543068 - 39542874
Alignment:
Q  25 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 124  Q
    |||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| || |||||| || | |||||||||| ||||   |||||||||    
T  39543068 accatactgagggtgttatttcttgaacgattacttatggtgcagtacgtaatcgaacag-taaactgggctattttatcctggaggcaatgcggttgtt 39542970  T
Q  125 ggtc-taccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgattt 220  Q
     ||| |||||| |||||||||| ||||||||| |||||||||| ||||| |||||| || ||||||||||| |||||| | ||||||| ||||||||    
T  39542969 agtcttaccttacacaaactcatgtagtgccgtgaaacgtctt-aaagagagcgacctgatcgtgactcaaaccggtattctcttcggtggtgattt 39542874  T

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Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 28945342 - 28945190
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||| || |  | |  | |||||||||||| ||||  |||    
T  28945342 gattaaaccatatttgagggtgttatttctagaatgattacttacggtgcagtgcgtaatcgaacaggtggattgagctgttttatcctggaggcaacgc 28945243  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaa 170  Q
    ||||||| || ||||||||||||||||  ||||||||||||||||||||||||    
T  28945242 ggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaaa 28945190  T

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Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 11658811 - 11659012
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||| ||||||| ||||||||||||||||||  || |||||| | |||| | |||||||||| || | |||| |  ||||||||| || |||||| ||    
T  11658811 gattaagccatatttgagggtgttatttctcgac-gactacttacggtgcaatacgtaatcgaacaggtgaactggactgttttatcatggaggcggtgc 11658909  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtga 217  Q
     |||||| |||||||||||||||| ||  ||||||||| |||| |||||||| ||||||||||||||| |||||||||| | |||||||||||| |||||    
T  11658910 agttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaa-gaaagcgacttggtcatgactcaacctgataatatcttcggtggtga 11659008  T
Q  218 tttc 221  Q
    ||||    
T  11659009 tttc 11659012  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 39542434 - 39542617
Alignment:
Q  25 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 124  Q
    |||||||||||||||||||||||  || ||||||||||| |||| |  ||||||||| || | ||| ||||||| |||||||| |||| |||| ||||||    
T  39542434 accatattgagggtgttatttcttcaacgattacttatggtgcaatatgtaatcgaacaggtgaacaaggttgtcttatcctggaggcagcgcagttgtt 39542533  T
Q  125 ggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 209  Q
     ||||||||| |||||| ||| ||||||  | |||||||||| ||||| || ||||| |||||||||||||| |||||| |||||    
T  39542534 agtctaccttacacaaattcaagtagtgttgtgaaacgtctt-aaagagagtgacttagtcgtgactcaacctggtaatctcttc 39542617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 28751729 - 28751835
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||| ||||||| | ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||| |    
T  28751729 tgttttatcctggagacggtgcggttgcttgtctaccttgcacaa-cttaggtagtgccgcgaaacgtct-aaaagaaagcgacctggtcgtgactcacc 28751826  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  28751827 ccggtaata 28751835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 42723451 - 42723557
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 42723548  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  42723549 ccggtaata 42723557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 42728620 - 42728726
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 42728717  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  42728718 ccggtaata 42728726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 44096397 - 44096291
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 44096300  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  44096299 ccggtaata 44096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 44754596 - 44754702
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 44754693  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  44754694 ccggtaata 44754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 44759762 - 44759868
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 44759859  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  44759860 ccggtaata 44759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 40518472 - 40518578
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |  | ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactattt-aggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 40518569  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  40518570 ccggtaata 40518578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 42914737 - 42914632
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||| | |||| |||||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagagaacgacctggtcgtgactcaac 42914640  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  42914639 ccgctaat 42914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 19538552 - 19538377
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||| ||||||||||||||| ||||| ||| | || ||| | |||||||| |  | ||| ||  |||||||||||  ||||| | | |||||    
T  19538552 accatattagagagtgttatttctcgaacgattatttacggtgtagtacttaatcgaacaagtgaaccagactgttttatcctaaaggcg-cacagttgt 19538454  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | ||||||||||||||||||| | |||||||| |||| ||||| |||||||||||| |||||||||||||||||||||    
T  19538453 tagtctaccttgcacaaactcggatagtgccgtgaaatgtctt-aaagaaagcgacctggtcgtgactcaacccggta 19538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 6297823 - 6297989
Alignment:
Q  33 gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctacc 132  Q
    ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | ||||||| |||||||||||| ||||  | |||||||| |||||||    
T  6297823 gagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactaggatgttttatcctggaggca-cacggttgttagtctacc 6297921  T
Q  133 ttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    ||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  6297922 ttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 6297989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 5089378 - 5089268
Alignment:
Q  91 taggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgac 190  Q
    |||| |||||||||||| || ||||| ||||||| ||||||||||||| ||||  | ||||||||||||||||||| ||||| |||||| ||||| ||||    
T  5089378 taggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtctt-aaagagagcgacctggtcatgac 5089281  T
Q  191 tcaacccggtaat 203  Q
    |||| ||| ||||    
T  5089280 tcaatccgataat 5089268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 10160723 - 10160823
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  10160723 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 10160821  T
Q  195 cc 196  Q
    ||    
T  10160822 cc 10160823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 40392414 - 40392342
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
    |||||||||||| || ||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||||    
T  40392414 tgttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa 40392342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 30658359 - 30658260
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |   |||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  30658359 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 30658261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 28855077 - 28854996
Alignment:
Q  119 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    |||||| |||||||||| |||||||  | |||||||| |||||||||| ||||||||||||  ||| ||||||||||||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtctt-aaagaaagcgaccgggttgtgactcaacccggta 28854996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 1934992 - 1935092
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  1934992 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 1935090  T
Q  195 cc 196  Q
    ||    
T  1935091 cc 1935092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 22844878 - 22844791
Alignment:
Q  132 cttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgattt 220  Q
    ||||||||||||| | ||||| || |||| |||||||| ||||||||| ||||||||||||| |||  ||||||| |||| ||||||||    
T  22844878 cttgcacaaactcggatagtggcgtgaaatgtcttaaa-gaaagcgacatggtcgtgactcaccccaataatatcctcggtggtgattt 22844791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 29907416 - 29907510
Alignment:
Q  148 tagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgatttctttttcaaaatggtacgtttcta 244  Q
    ||||| ||||||||||||||||| | | |||| ||||||||||| ||||||||||| ||||||| | | | |||||||| |||| ||||||||||||    
T  29907416 tagtgtcgcgaaacgtcttaaaa-agatcgacctggtcgtgacttaacccggtaatctcttcggtgataaattcttttttaaaa-ggtacgtttcta 29907510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 17327502 - 17327455
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaact 143  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  17327502 tgttttatcctggaggcggcgcgattgttggtctaccttacacaaact 17327455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 25497324 - 25497424
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||| |  || ||||   ||||||||||| ||||| |||||| ||||||||||||||    
T  25497324 ttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 25497422  T
Q  195 cc 196  Q
    ||    
T  25497423 cc 25497424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 27556737 - 27556640
Alignment:
Q  19 gattaaaccata-ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggc 115  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| | |||| | |||||| ||| |  | |||| | |||||||||| || |||||||    
T  27556737 gattaaaccatacttgagggtgttatttctcgaacgattacttacggtgcaatacgtaattgaacatgtgaactggattgttttatcatggaggcggc 27556640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 30651025 - 30650925
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| | |||| ||||||||||  |  || |||||| |||||||||||||| || |||||  ||||||||||||||    
T  30651025 ttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgatctggtcgtgactcaa 30650927  T
Q  195 cc 196  Q
    ||    
T  30650926 cc 30650925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 18344527 - 18344429
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| || ||||| ||||  | |||| ||||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  18344527 ttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 18344429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 29677474 - 29677377
Alignment:
Q  98 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 196  Q
    |||||||||| |||||||| ||||| | |||| | ||||||||  |  || |||||| |||||||||||||| || |||||| || |||||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacatgatcgtgactcaacc 29677377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 7737850 - 7737950
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| | |||| |||| ||||| |||||| ||||||||||||||    
T  7737850 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttctt-aaagagagcgacatggtcgtgactcaa 7737948  T
Q  195 cc 196  Q
    ||    
T  7737949 cc 7737950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 19578413 - 19578513
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||| |||| |||| ||  ||||| | |||| ||||||||||  | |||||||||| | ||||||||| ||||| |||||  ||||||||||||||    
T  19578413 ttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtctt-aaagagagcgatctggtcgtgactcaa 19578511  T
Q  195 cc 196  Q
    ||    
T  19578512 cc 19578513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 25478296 - 25478396
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||| ||| |||||||| ||||| | |||| ||||||||||  |  || |||| | |||||||||||||| || |||||| |||| |||||||||    
T  25478296 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaa-gagagcgacctggttgtgactcaa 25478394  T
Q  195 cc 196  Q
    ||    
T  25478395 cc 25478396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 44683222 - 44683173
Alignment:
Q  120 ttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
    ||||| ||||||||| ||||||||| | |||||||||||||||| |||||    
T  44683222 ttgttagtctaccttacacaaactcggatagtgccgcgaaacgttttaaa 44683173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 31640 - 31534
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 31543  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  31542 ccggtaata 31534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 26468 - 26362
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||| |||| ||||| |    
T  26468 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacttgatcgtaactcatc 26371  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  26370 ccggtaata 26362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 16539412 - 16539518
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 16539509  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  16539510 ccggtaata 16539518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 16626250 - 16626144
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 16626153  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  16626152 ccggtaata 16626144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 42572040 - 42571934
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 42571943  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  42571942 ccggtaata 42571934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 47177119 - 47177224
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  47177119 tgttttatcctgaagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 47177216  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  47177217 ccggtaat 47177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 9973560 - 9973452
Alignment:
Q  93 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||||||| ||  | |||||||||||||||||||||| ||||||||| ||||||||||||    
T  9973560 ggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactc 9973463  T
Q  193 aacccggtaat 203  Q
    |||||||||||    
T  9973462 aacccggtaat 9973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 12934492 - 12934387
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| ||    
T  12934492 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aactcaggtagtgccgcgaaatgtctt-aaagaaagcgacctggtcgtgactc-ac 12934396  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  12934395 ccggtaata 12934387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 33238097 - 33237991
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 33238000  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  33237999 ccggtaata 33237991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 47999070 - 47998964
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 47998973  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  47998972 ccggtaata 47998964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 19640458 - 19640290
Alignment:
Q  31 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 130  Q
    ||||||||||||| ||||||| ||||| ||| | |||||| |||||||||| || | ||||  | |||||||||||| |||| || ||||| || |||||    
T  19640458 ttgagggtgttatctctcgaacgattatttacggtgcagtacgtaatcgaacaggtgaactgagctgttttatcctggaggc-gcacggttcttagtcta 19640360  T
Q  131 ccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    |||||||||||||| |||| || || |||||||||| |||||||| ||| || ||||||||||||| ||||    
T  19640359 ccttgcacaaactcgggtaatgtcgtgaaacgtctt-aaagaaagagacatgatcgtgactcaacctggta 19640290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 21081039 - 21081147
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||| || ||| ||||||| | |||||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||     
T  21081039 tgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcac 21081137  T
Q  195 cccggtaata 204  Q
    ||||||||||    
T  21081138 cccggtaata 21081147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 2234630 - 2234736
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| ||||||||| || ||||||||||||| |    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcaacctggtcgtgactcacc 2234727  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  2234728 ccggtaata 2234736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 17495498 - 17495392
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    ||||||||| || || ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  17495498 tgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcacc 17495401  T
Q  196 ccggtaata 204  Q
     ||||||||    
T  17495400 tcggtaata 17495392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 17557716 - 17557822
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    ||||||||| || || ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  17557716 tgttttatcttggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcacc 17557813  T
Q  196 ccggtaata 204  Q
     ||||||||    
T  17557814 tcggtaata 17557822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 32212654 - 32212760
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || | ||||||||| | |||||||||||||||  | ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  32212654 tgttttatcctggagacagcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 32212751  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  32212752 ccggtaata 32212760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 33243274 - 33243168
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| || ||| ||||||||||||| |    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagtgacctggtcgtgactcatc 33243177  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  33243176 ccggtaata 33243168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 47993895 - 47993789
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| |||| |||||||| |    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggttgtgactcatc 47993798  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  47993797 ccggtaata 47993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 43892953 - 43892848
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | || |||||||||||| || ||||||||||| ||||||||||||| ||||||||| ||||||||||||| |    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcacaa-cttaggtagtgccgtgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 43892856  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  43892855 ccggtaat 43892848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 7875017 - 7875247
Alignment:
Q  20 attaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcg 118  Q
    ||||||||||||| |||| |||||||||||||| ||||||||| | |||||| |||||| ||  |  | | || |  || ||||||||| |||||||||     
T  7875017 attaaaccatatttgaggatgttatttctcgaacgattacttacggtgcagtacgtaattgatcaagtgagctggactgctttatcctgcaggcggcgca 7875116  T
Q  119 gttgttggtctaccttgcacaaactcaggtagtgcc---gcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggt 215  Q
    |||||| |||||| ||||||||||||  ||||||     | ||||||||||||| ||||||||| || || | |||||||| |||||||||||||| |||    
T  7875117 gttgttagtctacgttgcacaaactcgagtagtgatattgtgaaacgtcttaaa-gaaagcgacctgatcattactcaacctggtaatatcttcggtggt 7875215  T
Q  216 gatttc--tttttcaaaatggtacgtttctag 245  Q
    ||||||  |||||||| | ||||| |||||||    
T  7875216 gatttcgttttttcaacaaggtacttttctag 7875247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 28292506 - 28292607
Alignment:
Q  99 tttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccg 198  Q
    ||||||||| || ||||| ||||||| ||||||||||||| ||||  | ||||||||||||||||||||||||  |||||| ||||||||||| ||||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaaag--agcgacctggtcgtgacttaacccg 28292602  T
Q  199 gtaat 203  Q
    |||||    
T  28292603 gtaat 28292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 24528449 - 24528344
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  |||| |||||| ||||||||| ||||| |||||| |||||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtaatgccgcaaaacgtctt-aaagagagcgacctggtcgtgactcaac 24528352  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  24528351 ccgataat 24528344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 27256409 - 27256234
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||| |  || | |||| |   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  27256409 accatattagagggtgttatttctcgaacgatcatatacggtgcaatatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 27256311  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  27256310 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 27256234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 19309611 - 19309716
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||| ||||||||||||||||| ||||| |||||| |||| | |||||| |    
T  19309611 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtggtgccgcgaaacgtctt-aaagacagcgacctggttg-gactcacc 19309707  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  19309708 ccggtaata 19309716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 33226509 - 33226416
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgact 191  Q
    ||||||||||||  | ||||| ||||||| |||||||||||| || || |||||||||||||||||||||| ||||| |||||| |||||||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgcataa-cttaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgact 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 22857717 - 22857793
Alignment:
Q  126 gtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 204  Q
    ||||||||||||||| || || |||||||||||||||||||||| ||||||||| || |||||||||| ||||||||||    
T  22857717 gtctaccttgcacaa-cttagatagtgccgcgaaacgtcttaaa-gaaagcgacctgatcgtgactcaccccggtaata 22857793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 24169968 - 24170110
Alignment:
Q  27 catattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttgg 126  Q
    |||||||||||| |||||||||| ||| ||||||||| || ||| ||||||||||||  | || | | ||||||| ||||| | ||||| ||||||||      
T  24169968 catattgagggttttatttctcgcatgtttacttatggtgaagtacgtaatcgaaaaagtgaattggattgttttttcctggatgcggcacggttgttat 24170067  T
Q  127 tctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
     |||||||||||||| || | || || || |||||||||||||    
T  24170068 cctaccttgcacaaattcggatactgtcgtgaaacgtcttaaa 24170110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 4579604 - 4579504
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  4579604 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 4579506  T
Q  195 cc 196  Q
    ||    
T  4579505 cc 4579504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 8076146 - 8076040
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||| ||| ||||| | ||||  |||||||||  | ||| |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  8076146 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 8076048  T
Q  195 cccggtaa 202  Q
    ||| ||||    
T  8076047 cccagtaa 8076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 9650966 - 9651066
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  9650966 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 9651064  T
Q  195 cc 196  Q
    ||    
T  9651065 cc 9651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 26341295 - 26341195
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||| ||||| ||||| |||||| ||||||||||||||    
T  26341295 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctt-aaagagagcgacctggtcgtgactcaa 26341197  T
Q  195 cc 196  Q
    ||    
T  26341196 cc 26341195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 23866164 - 23866065
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  23866164 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 23866066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 12254175 - 12254069
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||||||||||||||| | ||| | |||| ||||||||||  | ||| |||||| | |||| |||| ||||| |||||| |||||| |||||||    
T  12254175 ttgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatctt-aaagagagcgacctggtcgcgactcaa 12254077  T
Q  195 cccggtaa 202  Q
    || |||||    
T  12254076 cctggtaa 12254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 23246932 - 23247030
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| |||||| |||| ||||| |||||| ||||||||||||||    
T  23246932 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatctt-aaagagagcgacctggtcgtgactcaa 23247030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 16372443 - 16372394
Alignment:
Q  146 ggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 196  Q
    ||||||||| |||||| ||||||| || |||||||||||||||||||||||    
T  16372443 ggtagtgccacgaaacatcttaaa-gagagcgacttggtcgtgactcaacc 16372394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 13314235 - 13314335
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| ||||| || || || | |||||||||||||||  |  || ||| || ||||||||||| ||||| |||||  ||||||||||||||    
T  13314235 ttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtctt-aaagagagcgatctggtcgtgactcaa 13314333  T
Q  195 cc 196  Q
    ||    
T  13314334 cc 13314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 19640258 - 19640225
Alignment:
Q  188 gactcaacccggtaatatcttcggaggtgatttc 221  Q
    |||||||||||||||||||||||| |||||||||    
T  19640258 gactcaacccggtaatatcttcggtggtgatttc 19640225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 20932642 - 20932687
Alignment:
Q  25 accatattgagggtgttatttctcgaatgattacttatgttgcagt 70  Q
    |||||||||| |||||||||||||||| ||||||||| | ||||||    
T  20932642 accatattgaaggtgttatttctcgaacgattacttacgatgcagt 20932687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19687208 - 19687172
Alignment:
Q  25 accatattgagggtgttatttctcgaatgattactta 61  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  19687208 accatattgagagtgttatttctcgaacgattactta 19687172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 11251113 - 11251219
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 11251210  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  11251211 ccggtaata 11251219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 34318224 - 34318330
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||||| |    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacttggtcgtgactcatc 34318321  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  34318322 ccggtaata 34318330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 37404416 - 37404522
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 37404513  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  37404514 ccggtaata 37404522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 10106201 - 10106095
Alignment:
Q  93 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  10106201 ggttgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactc 10106104  T
Q  193 aacccggta 201  Q
    |||||||||    
T  10106103 aacccggta 10106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 36684715 - 36684821
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 36684812  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  36684813 ccggtaata 36684821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 37409537 - 37409643
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| |  ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  37409537 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 37409634  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  37409635 ccggtaata 37409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 33055205 - 33055030
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| |||||||||||||||||||  |||| ||| | |||||| | |||||||| || | |||| || |||||||||||| |||| || ||||||     
T  33055205 accatattagagggtgttatttctcgaacaattatttacgatgcagtacttaatcgaacaggtgaactgggctgttttatcctggaggc-gcacggttga 33055107  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | ||||||||||||||||||| |||||||||| ||   ||||| |||||||||||| |||| ||||||||||| ||||    
T  33055106 tagtctaccttgcacaaactcgggtagtgccgtgattagtctt-aaagaaagcgacatggttgtgactcaacctggta 33055030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 3584696 - 3584590
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | |||||||||||||||  | ||||||| ||||||||||||||||| ||||||||| ||||||||||||| |    
T  3584696 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagttccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 3584599  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  3584598 ccggtaata 3584590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 25188270 - 25188401
Alignment:
Q  94 gttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 193  Q
    ||||||||||| || || || | |||||||| |||||||||||||||||||| ||||||||||||||| ||||  |||||||| || || | ||||||||    
T  25188270 gttgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttctt-caagaaagcaacctgatagtgactca 25188368  T
Q  194 acccggtaatatcttcggaggtgatttcttttt 226  Q
    || || |||||||||||| ||||||| ||||||    
T  25188369 acacgataatatcttcggcggtgattacttttt 25188401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 27716538 - 27716432
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || || ||| |||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  27716538 tgttttatcctggagacgacgctgttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 27716441  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  27716440 ccggtaata 27716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 38734370 - 38734265
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaac 38734273  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  38734272 ccgataat 38734265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 5725074 - 5724979
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 193  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 5730200 - 5730094
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||| ||||||| | |||||||||||||||  | ||||||| ||||||||||||||||| ||||||||| ||||||||||||| |    
T  5730200 tgttttatcctggagacggtgcggttgctagtctaccttgcacaattt-aggtagttccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 5730103  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  5730102 ccggtaata 5730094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 11387846 - 11387936
Alignment:
Q  112 cggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 204  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||| |||| |||||    
T  11387846 cggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcaccccgataata 11387936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 13890908 - 13890805
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||| | ||||||| ||||||||||||||| ||  ||||||||||| |||||||||||| || |||||| |||||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaa-cttgggtagtgccgcaaaacgtcttaaa-gagagcgacctggtcgtgactcaac 13890811  T
Q  196 ccggta 201  Q
    ||||||    
T  13890810 ccggta 13890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 5602425 - 5602530
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    ||||||||| || || ||||| ||||||| ||||||||||||| ||||  |||||||| |||||||||||| ||||| |||||  |||||||||||||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcac-aactagggtagtgcagcgaaacgtctt-aaagagagcgatctggtcgtgactcaac 5602522  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  5602523 ccggtaat 5602530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 10135552 - 10135452
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||  |||||||| ||||| | |||| ||||||||||  | |||||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  10135552 ttgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 10135454  T
Q  195 cc 196  Q
    ||    
T  10135453 cc 10135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 201
Target Start/End: Original strand, 41097880 - 41098055
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| |||| |||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || |||||||||||| ||||  | |||||||    
T  41097880 accatattagaggatgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcctggaggca-cacggttgt 41097978  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||||||    
T  41097979 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaacccggta 41098055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 48246683 - 48246755
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 169  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||    
T  48246683 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaa 48246755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 14724422 - 14724219
Alignment:
Q  19 gattaaaccatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcgg-cg 116  Q
    |||||||||||||| || |||||||||||||||| ||||||||||  | || | | |||||||| |  | | ||  |||||||||||||| |||||| |     
T  14724422 gattaaaccatatttgacggtgttatttctcgaacgattacttatagtacaatacataatcgaacatgtgatctgtgttgttttatcctggaggcggtca 14724323  T
Q  117 cggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtg 216  Q
    |||||||| |||||||||| |||||||||| ||||||| | ||||||  | ||||||| |||| |||| ||||| ||| |  ||||||||||  | ||||    
T  14724322 cggttgttagtctaccttgtacaaactcagatagtgccacaaaacgtagt-aaagaaaacgacctggttgtgacacaatcatgtaatatctttagtggtg 14724224  T
Q  217 atttc 221  Q
    |||||    
T  14724223 atttc 14724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 4632855 - 4633025
Alignment:
Q  25 accatattgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgtt 124  Q
    ||||||| |||||||||||||||| ||  |||| ||| | ||||||||||||||||| |  | ||||||| || |||||| || ||| | || | ||| |    
T  4632855 accatatcgagggtgttatttctcaaactattatttacgatgcagtgcgtaatcgaacaagtgaactagggtggtttatcatggaggagtcgtgattgat 4632954  T
Q  125 ggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacc 196  Q
       |||||||||||||| || | ||||||||| ||||||||| ||||| |||||| | ||||||||||||||    
T  4632955 aacctaccttgcacaaattcggatagtgccgcaaaacgtctt-aaagagagcgacatagtcgtgactcaacc 4633025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 8267758 - 8267931
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||||| |||   |||| | | |||||||| |  | |||| |||||||||||| || ||||  | |  ||||    
T  8267758 accatattagagggtgttatttctcgaacgattatttacagtgcaatacttaatcgaacatgtgaactgggttgttttatcttggaggca-cacaattgt 8267856  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgc-gaaacgtcttaaaagaaagcgacttggtcgtgactcaacccg 198  Q
    | ||||||||||||||||||| | ||||| ||  ||||||||||||| ||||||||| ||||||||||||||||||    
T  8267857 tagtctaccttgcacaaactcggatagtgtcggtgaaacgtcttaaa-gaaagcgacctggtcgtgactcaacccg 8267931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 26651166 - 26651271
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||| |||| |||| ||||| || ||| |||||||||||||||    
T  26651166 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcaaaacatctt-aaagagagtgacctggtcgtgactcaac 26651263  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  26651264 ccgataat 26651271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 39747165 - 39747270
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || || || ||||| | ||||||||||||||| ||  ||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaa-cttgggtagtgccgcgaaacgtctt-aaagagagcaacctggtcgtgactcaac 39747262  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  39747263 ccgataat 39747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 14582194 - 14582089
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||| | ||||||| ||||||||||||| ||||  |||||||||||||||| |||| ||||| |||||| || |||| |||||||    
T  14582194 tgttttatcctggagacggtgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacttctt-aaagagagcgacctgatcgtaactcaac 14582097  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  14582096 ccgataat 14582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 27711383 - 27711319
Alignment:
Q  112 cggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcga 178  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||| |||||||||||    
T  27711383 cggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtctt-aaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 40166076 - 40165976
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||  ||||||||  |||||| |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  40166076 ttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacatggtcgtgactcaa 40165978  T
Q  195 cc 196  Q
    ||    
T  40165977 cc 40165976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 18784548 - 18784647
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||| ||| |||||||| ||||| | |||| ||||||||||  | ||| |||||| ||||| ||||||||||  |||||| || |||||||||||    
T  18784548 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaaag--agcgacctgatcgtgactcaa 18784645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 23192816 - 23192916
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| ||| |||| ||||| | |||| ||||| ||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  23192816 ttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 23192914  T
Q  195 cc 196  Q
    ||    
T  23192915 cc 23192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 51041462 - 51041559
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  51041462 ttgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttg-ggcagtgccacgaaacgtcttaaaag--agcgacctggtcgtgactcaa 51041558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 19799012 - 19799112
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  | ||||||| ||||||||||| ||||| |||||  || |||||||||||    
T  19799012 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtctt-aaagagagcgatctgatcgtgactcaa 19799110  T
Q  195 cc 196  Q
    ||    
T  19799111 cc 19799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 47451224 - 47451324
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| | ||||  |||||||||  |  || ||||||  ||||||||||||| || |||||| ||||||||||||||    
T  47451224 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 47451322  T
Q  195 cc 196  Q
    ||    
T  47451323 cc 47451324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 13740 - 13845
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 13837  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  13838 ccggtaat 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 19212 - 19310
Alignment:
Q  110 ggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttc 209  Q
    |||| |||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||| |||    
T  19212 ggcgccgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacatggtcgtgactcaccccagtaatattttc 19309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 33917 - 34074
Alignment:
Q  44 ttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaact 143  Q
    ||||||||  ||||| |||  |||||| |||||| ||||||| |  |||||||||||||||||| ||| || |||||||||  ||||||||| |||||||    
T  33917 ttctcgaacaattacatattgtgcagtacgtaattgaaaagtgat-ctaggttgttttatcctgaaggaggagcggttgttattctaccttgtacaaact 34015  T
Q  144 caggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaat 203  Q
      ||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||    
T  34016 ttggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaacccgataat 34074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 9208 - 9314
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | |||| |||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 9305  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  9306 ccggtaata 9314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 3658 - 3552
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| |  ||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  3658 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 3561  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  3560 ccggtaata 3552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 3153 - 3047
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 3056  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  3055 ccggtaata 3047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 81382 - 81488
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcatc 81479  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  81480 ccggtaata 81488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 17955789 - 17955895
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaaa-aaagcgacctggtcgtgactcacc 17955886  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  17955887 ccggtaata 17955895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 21644081 - 21644187
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||| ||| |    
T  21644081 tgttttatcctggagtcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgattcacc 21644178  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  21644179 ccggtaata 21644187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 42514374 - 42514480
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||| ||||||| |    
T  42514374 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcatgactcacc 42514471  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  42514472 ccggtaata 42514480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 32015795 - 32015689
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || |||||||||||| ||||||||||| ||||| |||||| ||||||||||||| |    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aattcaggtagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcatc 32015698  T
Q  196 ccggtaata 204  Q
    |||||||||    
T  32015697 ccggtaata 32015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 19430109 - 19430004
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19430012  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  19430011 ccggtaat 19430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 19435611 - 19435506
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19435514  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  19435513 ccggtaat 19435506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 19566258 - 19566153
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19566161  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  19566160 ccggtaat 19566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 19571760 - 19571655
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||  || ||||| ||||||| ||||||||||||||| ||  |||||||||||||||||||||||| || |||||| |||||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 19571663  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  19571662 ccggtaat 19571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 33616727 - 33616832
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| ||||||||||||||     
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgactcaat 33616824  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  33616825 ccgataat 33616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 24884805 - 24884701
Alignment:
Q  98 ttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 197  Q
    |||||||||| || ||||| ||||| | ||||||||||||||| || |||||||||||| |||||||||||| |||||| || ||||||||||||| |||    
T  24884805 ttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcaaaacgtcttaaa-gaaagctacctggtcgtgactcacccc 24884708  T
Q  198 ggtaata 204  Q
    |||||||    
T  24884707 ggtaata 24884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 43999230 - 43999336
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || |||||| |||| | ||||||||||||| || | ||||||||||||||||||| || ||||||| |||| || ||||||||||||    
T  43999230 tgttttatcctggagacggcgcagttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgt-tttaaagaaaacgacctgatcgtgactcaac 43999327  T
Q  196 ccggtaata 204  Q
    || ||||||    
T  43999328 ccagtaata 43999336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 31030623 - 31030518
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| |||||||||||| ||  |  ||||||| |||||||||||||||| || |||||| |||||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataatttg-ggtagtgtcgcgaaacgtcttaaa-gagagcgacctggtcgtgactcaac 31030526  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  31030525 ccgataat 31030518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 13584453 - 13584340
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaa-------actcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtg 188  Q
    |||||||||||| || ||||| ||||||| |||||||||||||||       |||  ||||||||||||||||||||| ||||| |||||| ||||||||    
T  13584453 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtg 13584355  T
Q  189 actcaacccggtaat 203  Q
    | |||||| ||||||    
T  13584354 attcaacctggtaat 13584340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 33848117 - 33847991
Alignment:
Q  93 ggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactc 192  Q
    |||||||||||| |  ||||| | | |||||||||| ||||||||||||||| ||||||| |||||||| | ||  |||||| | || || |||||||||    
T  33848117 ggttgttttatcgtagaggcgacactgttgttggtccaccttgcacaaactcgggtagtggcgcgaaacat-tttgaagaaaactacctgatcgtgactc 33848019  T
Q  193 aacccggtaatatcttcggaggtgatttc 221  Q
    ||||| ||||||||||||| ||| |||||    
T  33848018 aaccc-gtaatatcttcggtggtaatttc 33847991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 37771828 - 37771707
Alignment:
Q  74 taatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaa 173  Q
    |||||||| || | |||| ||||||||||||||| ||||  | |||||||| ||||||||| |||||  || |||||||||| ||   |||||||| |||    
T  37771828 taatcgaacaggtgaactgggttgttttatcctggaggca-cacggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaa-gaa 37771731  T
Q  174 agcgacttggtcgtgactcaaccc 197  Q
    |||||| |||||||||||||||||    
T  37771730 agcgacctggtcgtgactcaaccc 37771707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 18876366 - 18876465
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  18876366 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaag--agcgacctggtcgtgactcaa 18876463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 19166730 - 19166630
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| || |||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  19166730 ttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacatggtcgtgactcaa 19166632  T
Q  195 cc 196  Q
    ||    
T  19166631 cc 19166630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 31449865 - 31449965
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | ||||  |||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  31449865 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 31449963  T
Q  195 cc 196  Q
    ||    
T  31449964 cc 31449965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 32010587 - 32010527
Alignment:
Q  143 tcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaata 204  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||| ||||||||||    
T  32010587 tcaggtagtgccgcgaaatgtcttaaaa-agagcgacctggtcgtgactcatcccggtaata 32010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 34818627 - 34818798
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | ||||  |||||||||||||| ||||  | || ||||    
T  34818627 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgagttgttttatcctggaggca-cacgattgt 34818725  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 197  Q
    | |||||||||||||||  || ||||||| || ||   |||||||| ||||||||| |||||||||||||||||    
T  34818726 tagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaaccc 34818798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 38182236 - 38182336
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| |  ||| |||||||||| ||  || |||||| |||||||| || ||||| |||||| ||||||||||||||    
T  38182236 ttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgt-tttaaagagagcgacctggtcgtgactcaa 38182334  T
Q  195 cc 196  Q
    ||    
T  38182335 cc 38182336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 44925922 - 44926022
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| |||||||| || ||||| |||||| ||||||||||||||    
T  44925922 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgt-tttaaagagagcgacctggtcgtgactcaa 44926020  T
Q  195 cc 196  Q
    ||    
T  44926021 cc 44926022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 40125884 - 40125984
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||  ||||||||||||||    
T  40125884 ttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgatctggtcgtgactcaa 40125982  T
Q  195 cc 196  Q
    ||    
T  40125983 cc 40125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 15875667 - 15875765
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||| | ||||| |||||| ||||||| ||||||    
T  15875667 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcct-aaagagagcgacctggtcgtaactcaa 15875765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 25367993 - 25368093
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| ||||  | |||||||| |||||||||||||||  || ||||||| || ||   ||||||||| |||| ||| |||||||||||||||    
T  25367993 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaaa-aaagtgacctggtcgtgactcaac 25368090  T
Q  196 ccg 198  Q
    |||    
T  25368091 ccg 25368093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 17026031 - 17025931
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| ||||| || | ||| | ||||  |||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  17026031 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 17025933  T
Q  195 cc 196  Q
    ||    
T  17025932 cc 17025931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 17556523 - 17556423
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| ||||| || | ||| | ||||  |||||||||  |  || |||||| |||||||||||||| || |||||| ||||||||||||||    
T  17556523 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 17556425  T
Q  195 cc 196  Q
    ||    
T  17556424 cc 17556423  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 17953872 - 17953972
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| |  |||  |||||||||  |  || |||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  17953872 ttgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-gaaagcgacatggtcgttactcaa 17953970  T
Q  195 cc 196  Q
    ||    
T  17953971 cc 17953972  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 33416643 - 33416543
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    |||||||||| || |||||||| ||||| | ||||  |||||||||  |  || |||||| |||||||||||||| || | |||| ||||||||||||||    
T  33416643 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-gagaccgacctggtcgtgactcaa 33416545  T
Q  195 cc 196  Q
    ||    
T  33416544 cc 33416543  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 34118562 - 34118462
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||  ||||| || ||||| | |||| ||||||||||  |  || ||||||  ||||||||||||| || |||||| ||||||||||||||    
T  34118562 ttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 34118464  T
Q  195 cc 196  Q
    ||    
T  34118463 cc 34118462  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 43302717 - 43302762
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaa 140  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||    
T  43302717 ttgttttatcctggaggcggcgtggttgatagtctaccttgcacaa 43302762  T

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Target: scaffold0060 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 37105 - 36999
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||||||||| | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctt-aaagaaagcgacctggtcgtgactcacc 37008  T
Q  196 ccggtaata 204  Q
    || ||||||    
T  37007 ccagtaata 36999  T

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Target: scaffold0027 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 43277 - 43070
Alignment:
Q  19 gattaaaccatattgagggtgtt-atttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgc 117  Q
    |||||||||||||| | || ||| |||||||||||||||||||| | || ||| |||||||||| |||||||| |||||||||||||||  || |||| |    
T  43277 gattaaaccatatttaaggggtttatttctcgaatgattacttacggtgtagtacgtaatcgaatagttaaacaaggttgttttatcctagagacggcac 43178  T
Q  118 ggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtctt----aaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggag 213  Q
    |||||||  | ||| |||||||||||  ||||||||  |||||  ||||    |||  |||||||| || | ||||| ||||||| |||||||||||| |    
T  43177 ggttgttaatttacattgcacaaacttgggtagtgctacgaaaattcttaaagaaattaaagcgacctgattgtgacgcaacccgataatatcttcggtg 43078  T
Q  214 gtgatttc 221  Q
    || |||||    
T  43077 gtaatttc 43070  T

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Target: scaffold0011 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 1660 - 1550
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| |||||| ||||||||||| |||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagagcgacctggtcgtgacttaac 1563  T
Q  196 ccggtaatatctt 208  Q
    ||| |||| ||||    
T  1562 ccgataatttctt 1550  T

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Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 7141 - 7036
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||| | |||| ||||||| |||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtctt-aaagagaacgacctggtcgtaactcaac 7044  T
Q  196 ccggtaat 203  Q
    ||| ||||    
T  7043 ccgataat 7036  T

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Target: scaffold0132 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 2772 - 2877
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||| | ||||||||||| |||||  ||||| |||||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacgaaacgtctt-aaagagcgcgacctggtcgtgactcaac 2869  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  2870 ccggtaat 2877  T

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Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 10732 - 10837
Alignment:
Q  96 tgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 195  Q
    |||||||||||| || ||||| ||||||| ||||||||||||| ||||  ||||||| | ||||||||||| |||||  ||||| |||||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacgaaacgtctt-aaagagcgcgacctggtcgtgactcaac 10829  T
Q  196 ccggtaat 203  Q
    ||||||||    
T  10830 ccggtaat 10837  T

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Target: scaffold0352 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 7200 - 7100
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  7200 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 7102  T
Q  195 cc 196  Q
    ||    
T  7101 cc 7100  T

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Target: scaffold0182 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 9886 - 9986
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  9886 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctt-aaagagagcgacctggtcgtgactcaa 9984  T
Q  195 cc 196  Q
    ||    
T  9985 cc 9986  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 1154 - 1325
Alignment:
Q  25 accatatt-gagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgt 123  Q
    |||||||| ||||||||||||||||||| ||| |  || | ||||||   |||||||| || | |||| || ||||||||| || ||||  | |||||||    
T  1154 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggctgttttatcttggaggca-cacggttgt 1252  T
Q  124 tggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaaccc 197  Q
    | |||||||||||||||  || |||||||||| ||   |||||||| ||||||||| |||||||||||||||||    
T  1253 tagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaa-gaaagcgacctggtcgtgactcaaccc 1325  T

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Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 45944 - 45776
Alignment:
Q  31 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 130  Q
    ||||||||||||||||||||| ||| |  || | ||||||   |||| ||| || | |||| || |||||||||||| ||||  | |||||||| |||||    
T  45944 ttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtgaactgggctgttttatcctggaggca-cacggttgttagtcta 45846  T
Q  131 ccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    ||||||||||  || |||||||||| ||   || || |||||||||||| |||| ||||||||||||||||    
T  45845 ccttgcacaatttcgggtagtgccgtgatttgt-tttaaagaaagcgacctggttgtgactcaacccggta 45776  T

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Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 152843 - 153011
Alignment:
Q  31 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaaaagttaaactaggttgttttatcctgtaggcggcgcggttgttggtcta 130  Q
    ||||||||||||||||||||| ||| |  || | ||||||   |||| ||| || | |||| || |||||||||||| ||||  | |||||||| |||||    
T  152843 ttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtgaactgggctgttttatcctggaggca-cacggttgttagtcta 152941  T
Q  131 ccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggta 201  Q
    ||||||||||  || |||||||||| ||   || || |||||||||||| |||| ||||||||||||||||    
T  152942 ccttgcacaatttcgggtagtgccgtgatttgt-tttaaagaaagcgacctggttgtgactcaacccggta 153011  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 4170 - 4070
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | |||| ||||||||||  |  || |||||| ||||| ||||| ||||| |||||| ||||||||||||||    
T  4170 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtctt-aaagagagcgacctggtcgtgactcaa 4072  T
Q  195 cc 196  Q
    ||    
T  4071 cc 4070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 83162 - 83062
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||  ||||| | |||| ||||||| ||  |  ||| ||| | |||||||||||||| || |||||| ||||||||||||||    
T  83162 ttgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaa-gagagcgacctggtcgtgactcaa 83064  T
Q  195 cc 196  Q
    ||    
T  83063 cc 83062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 166085 - 166185
Alignment:
Q  95 ttgttttatcctgtaggcggcgcggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaa 194  Q
    ||||||||||||| |||||||| ||||| | || |  |||||||||  |  || |||||| ||||||||||| ||||| |||||| |||| |||||||||    
T  166085 ttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtctt-aaagagagcgacctggttgtgactcaa 166183  T
Q  195 cc 196  Q
    ||    
T  166184 cc 166185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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