View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15481_high_24 (Length: 328)
Name: NF15481_high_24
Description: NF15481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15481_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 29632632 - 29632324
Alignment:
| Q |
1 |
atatattatttggtttgttagttttgattttaaagacgacgttttgatcatgtgtatgaaaagnnnnnnnnnnnnagggattatgaagtaggattatgca |
100 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
29632632 |
atatattttttggtttgttagttttgattttaaagacgacgttttgatcatgtgtatgaaaagtttttttttt--agggattatgaagtaggattatgca |
29632535 |
T |
|
| Q |
101 |
gtagagactactcattgttaaagtaaaagnnnnnnngtaatgtgctaattcagaattgctgcagcagaaaaagatatacagaataagaattgttgcatga |
200 |
Q |
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||||||||||||||| ||||||||||||| | |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29632534 |
gtagagactactcatcgttaaagtaaaagaaaaaaagcaatgtgctaaatcagagttgctgcagcagaaaaagatatacagaataagaattgttgcatga |
29632435 |
T |
|
| Q |
201 |
tcgcaaccgtttacacaactgctatttaaagccataagcatgggataatgaactaaactgaatagaaacatcaggggagagcacataaacatgctactat |
300 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29632434 |
tcgcgaccgtttacacaactgctatttaaagccataagcatgggataatgaactaaactgaatagaaacatcaggggagagcacataaacatgctactat |
29632335 |
T |
|
| Q |
301 |
gtaggaataat |
311 |
Q |
| |
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||||||||||| |
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|
| T |
29632334 |
gtaggaataat |
29632324 |
T |
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