View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15481_low_12 (Length: 418)
Name: NF15481_low_12
Description: NF15481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15481_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 113 - 413
Target Start/End: Original strand, 43315758 - 43316058
Alignment:
| Q |
113 |
ttgtcatatgataatgcatatgtcaaacatatcatttgtgaccatacaagtaaaatacaaccaatatcctatatggaaagaactttgagaaattttctaa |
212 |
Q |
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| T |
43315758 |
ttgtcatatgataatgcatatgtcaaacatataatttgggaacatacaagtgggatgcaaccaatatcctatatggaaagaactttgagaaattttctaa |
43315857 |
T |
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| Q |
213 |
taataacaataatcaacaaaaaattaattaataaacagaagccgtgtttgtttcatgttcaaaataaagtgcaaaattcattttatggatatgcacaaaa |
312 |
Q |
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| T |
43315858 |
taataacaataatcaacaaaaaattaattaataaacagaagccgtgtttgtttcatgttcaaaataaagtgcaaaattcattttatggatatgcacaaaa |
43315957 |
T |
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| Q |
313 |
caaggaatatcccaaaacaaccagaaaagtggacctaagagtaatcataaatttcattttctctttctcaaatagttaaaaatggcttttttcttttctc |
412 |
Q |
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| T |
43315958 |
caaggaatatcccaaaacaaccagaaaagtggacctaagagtaataataaatttcattttctctttctcaaatagttaaaaatgccttttttcttttctc |
43316057 |
T |
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| Q |
413 |
t |
413 |
Q |
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| T |
43316058 |
t |
43316058 |
T |
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