View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15481_low_30 (Length: 288)
Name: NF15481_low_30
Description: NF15481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15481_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 39945962 - 39946217
Alignment:
| Q |
17 |
taggccacgaacaaggtgataacataagttgatacaggagattgaaatcagtaacctacatgagaaatacttgcaccattataacacaaagacgaggaaa |
116 |
Q |
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| T |
39945962 |
taggccacgaacaaggtgataaaataagttgatacaggagattgaaatcagtaacctacatgagaaatacttgcaccattataacacaaagacgaggaaa |
39946061 |
T |
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| Q |
117 |
gtatactaaagcccttttagaaatcacattcagagtgatgatctaagttaaaagtagaaaaggttgcctacagtctacacaacactttcatgaaccaaaa |
216 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
39946062 |
gtatactaaaacccttttagaaatcacattcagagtgatgatctaagttaaaagtagaaaaggttgcctacaggctacacaacactttcatgaaccaaaa |
39946161 |
T |
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| Q |
217 |
actacattggcatatgcccaactccaatcaatttaagcatgatgtgttgaggatat |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39946162 |
actacattggcatatgcccaactccaatcaatttaagcatgatgtgttgaggatat |
39946217 |
T |
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