View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15481_low_42 (Length: 223)

Name: NF15481_low_42
Description: NF15481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15481_low_42
NF15481_low_42
[»] chr1 (7 HSPs)
chr1 (1-208)||(44932055-44932262)
chr1 (124-202)||(38247317-38247394)
chr1 (130-199)||(45975569-45975638)
chr1 (3-75)||(44923989-44924060)
chr1 (130-200)||(1829075-1829145)
chr1 (122-208)||(17727218-17727304)
chr1 (122-206)||(1510434-1510518)
[»] chr7 (7 HSPs)
chr7 (131-208)||(21568751-21568828)
chr7 (126-208)||(9210493-9210575)
chr7 (127-203)||(33128623-33128699)
chr7 (128-192)||(34464351-34464415)
chr7 (149-208)||(45806600-45806659)
chr7 (124-208)||(46078010-46078094)
chr7 (130-186)||(46139821-46139877)
[»] chr8 (5 HSPs)
chr8 (122-208)||(14956418-14956504)
chr8 (127-208)||(28763239-28763320)
chr8 (171-208)||(38750268-38750305)
chr8 (133-202)||(41475179-41475248)
chr8 (173-205)||(41821469-41821501)
[»] chr2 (5 HSPs)
chr2 (130-208)||(41407170-41407248)
chr2 (131-202)||(9174694-9174765)
chr2 (132-187)||(43570297-43570352)
chr2 (140-208)||(32592466-32592534)
chr2 (124-208)||(42659274-42659358)
[»] chr6 (1 HSPs)
chr6 (122-208)||(6538378-6538464)
[»] chr3 (7 HSPs)
chr3 (151-208)||(29520601-29520658)
chr3 (151-208)||(5331184-5331241)
chr3 (142-207)||(39980610-39980675)
chr3 (125-208)||(31365395-31365478)
chr3 (122-208)||(944354-944442)
chr3 (124-199)||(28881830-28881905)
chr3 (142-202)||(52597580-52597639)
[»] scaffold0018 (1 HSPs)
scaffold0018 (124-185)||(157970-158031)
[»] scaffold0012 (1 HSPs)
scaffold0012 (173-208)||(207704-207739)
[»] chr5 (3 HSPs)
chr5 (129-208)||(32941339-32941417)
chr5 (135-199)||(19460508-19460572)
chr5 (126-198)||(32372489-32372561)
[»] chr4 (1 HSPs)
chr4 (176-208)||(43505871-43505903)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 44932262 - 44932055
Alignment:
Q  1 accaattccacatgtgataggacttgagaatcaaatatatctcaaagctaaaagattgtccatagttcatgaaaccagtcaactacaatactagaaactc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44932262 accaattccacatgtgataggacttgagaatcaaatatatctcaaagctaaaagattgtccatagttcatgaaactagtcaactacaatactagaaactc 44932163  T
Q  101 aatataacaccaagcatgccgactaagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataag 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44932162 aatataacaccaagcatgccgactaagggcctgtttggataaacagtttgtttgcagcatataacattaacacttatcatgataagcacttaggtataag 44932063  T
Q  201 cttgcata 208  Q
    ||||||||    
T  44932062 cttgcata 44932055  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 38247317 - 38247394
Alignment:
Q  124 taagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagct 202  Q
    ||||||||||||||| |||||||||  |||||||| |||| ||  | |||||||||||||| ||||||| |||||||||    
T  38247317 taagggcctgtttggataaacagcta-tttgcagcttatagcacaagcacttatcatgatatgcacttatgtataagct 38247394  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 45975569 - 45975638
Alignment:
Q  130 cctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataa 199  Q
    ||||||||| |||| ||||| |||| ||| |||||||  ||||||||||||||||||| |||| ||||||    
T  45975569 cctgtttggataaatagcttatttgtagcttataacacaaacacttatcatgataagcccttatgtataa 45975638  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 44924060 - 44923989
Alignment:
Q  3 caattccacatgtgataggacttgagaatcaaatatatctcaaagctaaaagattgtccatagttcatgaaac 75  Q
    ||||||||||||||| |  |||||| ||||||||||||| | | ||||||||||| ||||||| |||||||||    
T  44924060 caattccacatgtgacaa-acttgataatcaaatatatcactatgctaaaagattatccatagatcatgaaac 44923989  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 1829145 - 1829075
Alignment:
Q  130 cctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataag 200  Q
    ||||||||| |||||| ||| |||| | | |||| ||| ||||||||||||||||||| |||| |||||||    
T  1829145 cctgtttggataaacaacttatttgaaacctatagcataaacacttatcatgataagcgcttatgtataag 1829075  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 17727304 - 17727218
Alignment:
Q  122 actaagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||||||||||| |||||| ||| | || ||| |||| ||  | ||||||||| ||||||| ||||| |||||| |||||||    
T  17727304 actaagggcctgtttggataaacaacttatgtgtagcttatagcacaagcacttatcaagataagcgcttagatataaggttgcata 17727218  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 1510518 - 1510434
Alignment:
Q  122 actaagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgca 206  Q
    ||||||| ||||||||| |||||||||| |||| | | |||| ||  | | |||||| |||||||||||||  ||||||||||||    
T  1510518 actaaggacctgtttggataaacagcttatttgtatcttatagcacaagcgcttatcttgataagcacttatatataagcttgca 1510434  T

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Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 21568828 - 21568751
Alignment:
Q  131 ctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||| ||||||||||||||||||| |||| ||| |   |||||||||||||||||||| |||||||||||||||    
T  21568828 ctgtttggataaacagcttgtttgcagcttatagcataagtgcttatcatgataagcacttatgtataagcttgcata 21568751  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 9210493 - 9210575
Alignment:
Q  126 agggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||||||| |||||||||| |||||||| |||| |   |||| |||||||||||| | |||| |||||||||||||||    
T  9210493 agggcctgtttggataaacagcttatttgcagcttatagcgcaaacatttatcatgataatcgcttatgtataagcttgcata 9210575  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 33128623 - 33128699
Alignment:
Q  127 gggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagctt 203  Q
    |||||||||||| |||||||||| |||||||| || | ||  ||||||||||||||||||  |||| | ||||||||    
T  33128623 gggcctgtttggataaacagcttatttgcagcttacagcacaaacacttatcatgataagtgcttatgcataagctt 33128699  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 34464415 - 34464351
Alignment:
Q  128 ggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcactta 192  Q
    ||||| ||||| |||||| | |||||||||| |||| ||| ||| ||||||||||||||||||||    
T  34464415 ggcctttttggataaacaacatgtttgcagcctatagcataaacccttatcatgataagcactta 34464351  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 45806659 - 45806600
Alignment:
Q  149 tgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||||| |||| ||  | |||||||||| ||||||||||| |||||||||||||||    
T  45806659 tgtttgcagcttatagcaaaagcacttatcataataagcacttatgtataagcttgcata 45806600  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 46078010 - 46078094
Alignment:
Q  124 taagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||||||||||  ||||||||| | |||| | || | ||  ||||| ||||||||||||| |||| |||||||||| ||||    
T  46078010 taagggcctgtttggacaaacagcttatatgcaacttaaagcacaaacacatatcatgataagcgcttatgtataagcttacata 46078094  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 46139821 - 46139877
Alignment:
Q  130 cctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataag 186  Q
    ||||||||| |||||| ||| |||||||| |||||||  | ||||||||||||||||    
T  46139821 cctgtttggttaaacaacttatttgcagcttataacacaagcacttatcatgataag 46139877  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 14956504 - 14956418
Alignment:
Q  122 actaagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||| ||||||| |||||| ||| |||||||| |||| ||  | | |||||||||||||||||||| |||||||||||||||    
T  14956504 actaagggcttgtttggataaacaacttatttgcagcttatagcacaatcgcttatcatgataagcacttatgtataagcttgcata 14956418  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 28763239 - 28763320
Alignment:
Q  127 gggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||||||  |||||||||| |||| | | |||| ||| |||||||||||||||||| | ||| ||||| ||| |||||    
T  28763239 gggcctgtttgtataaacagcttatttgtaacttatagcataaacacttatcatgataagaatttatgtatatgctggcata 28763320  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 38750268 - 38750305
Alignment:
Q  171 cacttatcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  38750268 cacttatcatgataagcgcttatgtataagcttgcata 38750305  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 41475248 - 41475179
Alignment:
Q  133 gtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagct 202  Q
    |||||| |||||| ||| |||||| | ||||| |  ||||||| |||||||||||||||| |||||||||    
T  41475248 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 41475179  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 41821469 - 41821501
Alignment:
Q  173 cttatcatgataagcacttaggtataagcttgc 205  Q
    |||||||||||||||||||| ||||||||||||    
T  41821469 cttatcatgataagcacttatgtataagcttgc 41821501  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 41407170 - 41407248
Alignment:
Q  130 cctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||| ||||||||||||||||||| |||| ||  | | |||||||||||||||||||| |||||||||| ||||    
T  41407170 cctgtttggataaacagcttgtttgcagcttatagcacaagcgcttatcatgataagcacttatgtataagcttacata 41407248  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 9174694 - 9174765
Alignment:
Q  131 ctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagct 202  Q
    |||||||| |||||| ||| |||||||| ||| | |||| || |||||||||||| |||||| |||||||||    
T  9174694 ctgtttggataaacaacttatttgcagcttatgagattagcatttatcatgataaacacttatgtataagct 9174765  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 43570297 - 43570352
Alignment:
Q  132 tgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagc 187  Q
    |||||||||||||||||| |||||||| |||| ||  | |||||||||||||||||    
T  43570297 tgtttgggtaaacagcttatttgcagcttatagcacaagcacttatcatgataagc 43570352  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 32592466 - 32592534
Alignment:
Q  140 taaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||| ||| |||| ||| |||| ||  |||||||||||| |||||| |||| |||||||||||||||    
T  32592466 taaacaacttatttgtagcttatagcacaaacacttatcattataagcgcttatgtataagcttgcata 32592534  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 42659358 - 42659274
Alignment:
Q  124 taagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||||||||| |||  | ||| ||||||||  ||| ||   |||||||||||||||||| |||| |||||||||| ||||    
T  42659358 taagggcctgtttggataagaaacttatttgcagctaatagcacacacacttatcatgataagcgcttatgtataagcttacata 42659274  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 6538378 - 6538464
Alignment:
Q  122 actaagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||| |||||||||||| |||| ||||| |||||||| |||| ||  | ||||||| ||||||||| |||| |||||||||||||||    
T  6538378 actatgggcctgtttggataaatagcttatttgcagcttatagcacaagcacttataatgataagcgcttatgtataagcttgcata 6538464  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 29520658 - 29520601
Alignment:
Q  151 tttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||| |||| ||| |||||||||||| ||||||||||| |||||||||||||||    
T  29520658 tttgcagcttatagcataaacacttatcataataagcacttatgtataagcttgcata 29520601  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 5331184 - 5331241
Alignment:
Q  151 tttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||| |||| ||| ||||||||| || ||||||||||| |||||||||||||||    
T  5331184 tttgcagcttatagcataaacacttatgataataagcacttatgtataagcttgcata 5331241  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 39980610 - 39980675
Alignment:
Q  142 aacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcat 207  Q
    |||||||| |||||||| ||||  |  |||||||||||||||||||||||| ||||||| ||||||    
T  39980610 aacagcttatttgcagcttataggacaaacacttatcatgataagcacttatgtataagtttgcat 39980675  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 31365478 - 31365395
Alignment:
Q  125 aagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||| ||||| ||| |||||||||| |||||||| |||| ||  |    ||||||||||||||||||| |||||||||||||||    
T  31365478 aaggacctgtgtggataaacagcttatttgcagcttatagcacaagtgattatcatgataagcacttatgtataagcttgcata 31365395  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 944354 - 944442
Alignment:
Q  122 actaagggcctgtttgggtaaacagcttgtttgcagcatataacattaaca-cttatcatgataagca-cttaggtataagcttgcata 208  Q
    |||| ||| |||||||| |||||| ||| |||||||| ||||||| |||   |||||||||||||||  |||| |||||||||||||||    
T  944354 actaggggtctgtttggataaacaacttatttgcagcttataacactaagtgcttatcatgataagcggcttacgtataagcttgcata 944442  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 28881905 - 28881830
Alignment:
Q  124 taagggcctgtttgggtaaacagctt-gtttgcagcatataacattaacacttatcatgataagcacttaggtataa 199  Q
    ||||| |||||||||||||||||||| ||||||||| |||| ||| |  ||||||||| |||||| |||| ||||||    
T  28881905 taaggccctgtttgggtaaacagcttggtttgcagcttatagcataagaacttatcat-ataagctcttatgtataa 28881830  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 52597580 - 52597639
Alignment:
Q  142 aacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagct 202  Q
    |||||||||| |||||| |||||||  | ||||||||||||| |||||||| |||||||||    
T  52597580 aacagcttgtctgcagcttataacacaagcacttatcatgat-agcacttatgtataagct 52597639  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 157970 - 158031
Alignment:
Q  124 taagggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataa 185  Q
    ||||||||||||||| |||||||||| |||||||| |||| ||  ||||||||| |||||||    
T  157970 taagggcctgtttggataaacagcttatttgcagcttatagcacaaacacttatgatgataa 158031  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 207739 - 207704
Alignment:
Q  173 cttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||||||||||||||| |||||||||||||||    
T  207739 cttatcatgataagcacttatgtataagcttgcata 207704  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 32941339 - 32941417
Alignment:
Q  129 gcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcata 208  Q
    |||||||||| |||||||||| || ||||| |||| ||  | |||||| |||||||||| |||| |||||||||||||||    
T  32941339 gcctgtttggataaacagcttattagcagcttatagcaa-agcacttaccatgataagcgcttacgtataagcttgcata 32941417  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 19460572 - 19460508
Alignment:
Q  135 ttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtataa 199  Q
    |||| |||||||||| |||||||| |||| ||  ||  |||||||||||||||||||| ||||||    
T  19460572 ttggataaacagcttatttgcagcttatagcacaaatgcttatcatgataagcacttatgtataa 19460508  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 32372489 - 32372561
Alignment:
Q  126 agggcctgtttgggtaaacagcttgtttgcagcatataacattaacacttatcatgataagcacttaggtata 198  Q
    ||||| ||||||| |||||| ||| |||||||| |||| ||  | ||||||||||||||||| |||| |||||    
T  32372489 agggcatgtttggataaacaacttatttgcagcttatagcacaagcacttatcatgataagcccttatgtata 32372561  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 43505871 - 43505903
Alignment:
Q  176 atcatgataagcacttaggtataagcttgcata 208  Q
    ||||||||||||||||| |||||||||||||||    
T  43505871 atcatgataagcacttatgtataagcttgcata 43505903  T

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