View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15483_high_6 (Length: 353)

Name: NF15483_high_6
Description: NF15483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15483_high_6
NF15483_high_6
[»] chr7 (1 HSPs)
chr7 (45-337)||(2467434-2467731)


Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 45 - 337
Target Start/End: Original strand, 2467434 - 2467731
Alignment:
Q  45 gcttgagtaaacaatcggatgaccgttgttggtggtttaaattatttgatttctatgacggcttttaggcacatgtttagttaataattaatataaatag 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2467434 gcttgagtaaacaatcggatgaccgttgttggtggtttaaattatttgatttctatgacggcttttaggcacatgtttagttaataattaatataaatag 2467533  T
Q  145 tacgaatttaaatcaaataactaaggcaaattgcaaatttagttggggttagcagtcaattgaaatgggattatctcatgaacattcgtggacgcaaaaa 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2467534 tacgaatttaaatcaaataactaaggcaaattgcaaatttagttggggttagcagtcaattgaaatgggattatctcatgaacattcgtggacgcaaaaa 2467633  T
Q  245 caaaaac-----ctttaagcacaagttattaaacgaatggaagcataaatagagtaattgtattcaaacaacccaatgtattgcataatttaagaagt 337  Q
     |||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2467634 aaaaaaaaaaaactttaagcacaagttattaaacgaatggaagcataaatagagtaattgtattcaaacaaaccaatgtattgcataatttaagaagt 2467731  T

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