View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15483_low_11 (Length: 250)
Name: NF15483_low_11
Description: NF15483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15483_low_11 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 37115920 - 37116169
Alignment:
| Q |
1 |
tttattagtatcaaagtttcaaaagttacgtcttcaacattttttccttattttaaacgnnnnnnntattaaattaacttgtaaagttagataattttag |
100 |
Q |
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| T |
37115920 |
tttattagtatcaaagattcaaaagttacgtcttcaacattttttcctaattttaaacgaaaaaaatattaaattaacttgtaaagttagataattttag |
37116019 |
T |
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| Q |
101 |
cggctagtgacttaggtggacaaatctcctgacttttccattataactatatatggtatatgcttttggcgtgacattgaaattgaatacacgtattatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |
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| T |
37116020 |
cggctagtgacttaggtggacaaatctcctgacttttccattataactatatatgctatatgcttttggtgtgatattgaaattgaatacacgtattatt |
37116119 |
T |
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| Q |
201 |
ttcttgtcatctctggctgagaagatggtgtcacatatagttgagctttt |
250 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||| ||||| |
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| T |
37116120 |
ttcttgtcatctctggctgagaagatggtgtcacatacagttgaactttt |
37116169 |
T |
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