View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15485_high_19 (Length: 249)
Name: NF15485_high_19
Description: NF15485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15485_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 4616848 - 4616621
Alignment:
| Q |
1 |
tagattgcaattgcataaaagagtaatcaacgattacatggttcaagctgatcacaaaagtttatctaccatcctaatttaaagaaatcactcatgaata |
100 |
Q |
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| T |
4616848 |
tagattgcaattgcataaaagagtaatcaacgattacatggttcaagctgatcacaaaagtttatctaccatcctaatttaaagaaatcactcatgaata |
4616749 |
T |
|
| Q |
101 |
aatcgataacaaagttgcttcaatcttgtttcttagttcaatcttcaaccttgacttcctgaaaataaagtttctcagctttgtaaatagagaaagcaaa |
200 |
Q |
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| T |
4616748 |
aattgataacaaagttgcttcaatcttgtttcttagttcaatcttcaaccttgacttcctgaaaataaagcttctcagctttgtaaatagagaaagcaaa |
4616649 |
T |
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| Q |
201 |
atcacccaattcagggagtgttgtgtgc |
228 |
Q |
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| T |
4616648 |
atcacccaattcagggagtgttgtgtgc |
4616621 |
T |
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