View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15485_high_6 (Length: 461)

Name: NF15485_high_6
Description: NF15485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15485_high_6
NF15485_high_6
[»] chr6 (28 HSPs)
chr6 (189-443)||(31248989-31249243)
chr6 (189-443)||(35201601-35201855)
chr6 (189-443)||(13883128-13883382)
chr6 (189-443)||(30974974-30975228)
chr6 (189-443)||(30981413-30981667)
chr6 (189-443)||(30987577-30987831)
chr6 (189-443)||(35208836-35209090)
chr6 (188-443)||(26887499-26887755)
chr6 (189-443)||(13878380-13878634)
chr6 (189-443)||(16785572-16785826)
chr6 (189-443)||(17695128-17695382)
chr6 (189-443)||(25466176-25466431)
chr6 (202-443)||(25941330-25941550)
chr6 (189-420)||(26084725-26084957)
chr6 (189-420)||(26064756-26064988)
chr6 (189-422)||(28241626-28241860)
chr6 (189-272)||(1230684-1230767)
chr6 (193-443)||(22343078-22343331)
chr6 (189-443)||(22352129-22352386)
chr6 (188-305)||(26642828-26642945)
chr6 (188-305)||(26748794-26748911)
chr6 (189-270)||(13467955-13468036)
chr6 (334-420)||(1230556-1230643)
chr6 (189-235)||(33215499-33215545)
chr6 (244-443)||(33215533-33215732)
chr6 (189-264)||(15533145-15533220)
chr6 (379-443)||(13467740-13467803)
chr6 (189-237)||(14507668-14507716)
[»] chr7 (24 HSPs)
chr7 (189-443)||(7069433-7069687)
chr7 (189-443)||(7074440-7074694)
chr7 (189-443)||(25405046-25405300)
chr7 (195-443)||(3320325-3320573)
chr7 (195-443)||(3325073-3325321)
chr7 (188-443)||(44512802-44513058)
chr7 (188-438)||(25351004-25351254)
chr7 (188-438)||(25356698-25356948)
chr7 (188-443)||(34547140-34547374)
chr7 (189-429)||(30246642-30246862)
chr7 (189-305)||(7464913-7465029)
chr7 (195-438)||(25409809-25410031)
chr7 (189-305)||(8378833-8378949)
chr7 (191-407)||(40946076-40946292)
chr7 (318-443)||(7464795-7464921)
chr7 (244-409)||(2120626-2120791)
chr7 (189-270)||(44144357-44144438)
chr7 (395-443)||(8378781-8378829)
chr7 (334-421)||(48457544-48457632)
chr7 (188-235)||(2120591-2120638)
chr7 (188-235)||(48457440-48457487)
chr7 (408-443)||(15541270-15541305)
chr7 (189-237)||(3878322-3878370)
chr7 (348-438)||(44144147-44144236)
[»] chr4 (24 HSPs)
chr4 (189-443)||(11853202-11853456)
chr4 (189-443)||(18586616-18586871)
chr4 (187-438)||(16488999-16489250)
chr4 (189-443)||(31300074-31300329)
chr4 (189-422)||(40636868-40637102)
chr4 (188-443)||(8528917-8529172)
chr4 (189-443)||(15316630-15316863)
chr4 (189-443)||(4556336-4556585)
chr4 (189-407)||(15311994-15312191)
chr4 (189-443)||(4884531-4884779)
chr4 (193-305)||(15830817-15830929)
chr4 (346-443)||(15830949-15831046)
chr4 (189-443)||(16689217-16689472)
chr4 (189-422)||(47868195-47868429)
chr4 (188-407)||(8631744-8631963)
chr4 (189-272)||(6764654-6764737)
chr4 (191-305)||(2485277-2485390)
chr4 (189-305)||(25699401-25699518)
chr4 (334-422)||(6764778-6764867)
chr4 (189-269)||(7050722-7050802)
chr4 (189-241)||(26086240-26086292)
chr4 (334-422)||(2485178-2485269)
chr4 (189-221)||(4569723-4569755)
chr4 (348-438)||(4569907-4569995)
[»] chr8 (14 HSPs)
chr8 (189-443)||(25684296-25684550)
chr8 (189-443)||(4812762-4813018)
chr8 (189-443)||(28327561-28327815)
chr8 (189-443)||(28332284-28332538)
chr8 (189-445)||(16752796-16753052)
chr8 (189-443)||(28895153-28895407)
chr8 (189-445)||(16757541-16757776)
chr8 (189-443)||(29555062-29555317)
chr8 (189-429)||(590466-590686)
chr8 (189-443)||(9021384-9021638)
chr8 (189-443)||(21033520-21033775)
chr8 (188-422)||(22684971-22685206)
chr8 (192-272)||(3275955-3276035)
chr8 (189-272)||(23180008-23180091)
[»] chr3 (58 HSPs)
chr3 (189-443)||(10208275-10208530)
chr3 (189-443)||(10201229-10201484)
chr3 (189-443)||(10100366-10100621)
chr3 (189-443)||(10094349-10094598)
chr3 (189-443)||(29914230-29914484)
chr3 (189-443)||(16461853-16462108)
chr3 (189-443)||(10896655-10896910)
chr3 (190-443)||(54188160-54188413)
chr3 (189-443)||(5858197-5858451)
chr3 (21-188)||(2820514-2820681)
chr3 (241-443)||(6303015-6303217)
chr3 (244-445)||(27543980-27544181)
chr3 (189-396)||(22627488-22627695)
chr3 (189-443)||(47878448-47878681)
chr3 (189-370)||(29963456-29963637)
chr3 (205-443)||(10613055-10613293)
chr3 (189-443)||(54192897-54193130)
chr3 (40-188)||(2761168-2761316)
chr3 (189-427)||(10595323-10595541)
chr3 (189-422)||(51727309-51727543)
chr3 (189-422)||(4308584-4308818)
chr3 (20-188)||(2809221-2809389)
chr3 (189-254)||(10901398-10901463)
chr3 (189-422)||(27101563-27101797)
chr3 (189-422)||(25690659-25690893)
chr3 (189-407)||(9604931-9605150)
chr3 (189-304)||(10949694-10949810)
chr3 (189-420)||(35918254-35918486)
chr3 (187-305)||(43225825-43225943)
chr3 (189-305)||(20031764-20031882)
chr3 (189-438)||(47883163-47883412)
chr3 (189-305)||(11079169-11079286)
chr3 (190-272)||(29956218-29956300)
chr3 (190-272)||(30005373-30005455)
chr3 (189-270)||(27762476-27762557)
chr3 (57-183)||(2750954-2751080)
chr3 (21-183)||(2771019-2771181)
chr3 (189-237)||(27543946-27543994)
chr3 (189-272)||(4535262-4535345)
chr3 (334-407)||(29956529-29956602)
chr3 (334-407)||(30005684-30005757)
chr3 (334-407)||(43228156-43228229)
chr3 (65-186)||(2853874-2853995)
chr3 (189-237)||(6302984-6303032)
chr3 (391-443)||(22626261-22626312)
chr3 (104-183)||(2792273-2792352)
chr3 (104-183)||(2799320-2799399)
chr3 (338-443)||(4535411-4535519)
chr3 (334-407)||(43225951-43226024)
chr3 (189-234)||(43228032-43228077)
chr3 (213-443)||(48390497-48390727)
chr3 (379-438)||(10949540-10949598)
chr3 (348-438)||(27762266-27762355)
chr3 (189-264)||(45882659-45882734)
chr3 (379-429)||(11079360-11079410)
chr3 (370-422)||(27101488-27101540)
chr3 (137-189)||(2836736-2836788)
chr3 (192-268)||(38002494-38002570)
[»] chr2 (25 HSPs)
chr2 (189-443)||(2735858-2736112)
chr2 (189-443)||(2740594-2740848)
chr2 (189-443)||(39686636-39686890)
chr2 (189-443)||(45567062-45567316)
chr2 (189-443)||(17462088-17462343)
chr2 (189-443)||(39679698-39679952)
chr2 (189-443)||(22717502-22717756)
chr2 (189-443)||(33674682-33674936)
chr2 (189-438)||(12781502-12781751)
chr2 (189-443)||(22712793-22713026)
chr2 (189-443)||(20050299-20050554)
chr2 (188-443)||(20055042-20055301)
chr2 (189-443)||(30478666-30478899)
chr2 (318-443)||(17932414-17932539)
chr2 (189-443)||(35894538-35894771)
chr2 (189-429)||(27517931-27518151)
chr2 (318-428)||(17943318-17943429)
chr2 (189-270)||(17943210-17943291)
chr2 (189-443)||(37171029-37171283)
chr2 (189-305)||(38190649-38190766)
chr2 (334-407)||(45280306-45280379)
chr2 (334-407)||(5377754-5377827)
chr2 (191-241)||(5377898-5377948)
chr2 (189-235)||(45280457-45280503)
chr2 (190-235)||(17932328-17932373)
[»] chr1 (13 HSPs)
chr1 (189-443)||(9526117-9526371)
chr1 (189-443)||(9521367-9521620)
chr1 (189-443)||(2232262-2232504)
chr1 (188-443)||(21353623-21353858)
chr1 (189-272)||(2393729-2393812)
chr1 (189-272)||(2401643-2401726)
chr1 (189-272)||(2617280-2617363)
chr1 (189-270)||(25133681-25133762)
chr1 (189-256)||(23689317-23689384)
chr1 (337-421)||(13449856-13449941)
chr1 (334-422)||(2617403-2617490)
chr1 (189-237)||(20291280-20291328)
chr1 (379-430)||(25133914-25133965)
[»] chr5 (16 HSPs)
chr5 (195-443)||(1170470-1170718)
chr5 (189-443)||(25452146-25452400)
chr5 (189-443)||(2298278-2298528)
chr5 (189-443)||(35385729-35385962)
chr5 (189-443)||(22672504-22672739)
chr5 (189-443)||(42237954-42238208)
chr5 (189-443)||(1240078-1240333)
chr5 (189-422)||(6747044-6747278)
chr5 (189-443)||(40222414-40222668)
chr5 (351-438)||(25445305-25445392)
chr5 (188-422)||(10529404-10529639)
chr5 (188-422)||(6744800-6745035)
chr5 (189-274)||(25445219-25445304)
chr5 (189-422)||(4409797-4410031)
chr5 (191-422)||(39854226-39854458)
chr5 (194-244)||(17841766-17841816)
[»] scaffold0256 (1 HSPs)
scaffold0256 (189-443)||(15976-16230)
[»] scaffold0131 (1 HSPs)
scaffold0131 (191-443)||(30795-31048)
[»] scaffold0006 (1 HSPs)
scaffold0006 (206-443)||(224510-224726)
[»] scaffold0209 (1 HSPs)
scaffold0209 (189-429)||(17276-17496)
[»] scaffold1764 (1 HSPs)
scaffold1764 (189-443)||(1108-1341)
[»] scaffold0004 (1 HSPs)
scaffold0004 (188-443)||(188519-188754)
[»] scaffold0038 (1 HSPs)
scaffold0038 (189-422)||(41788-42022)
[»] scaffold0552 (2 HSPs)
scaffold0552 (189-272)||(1266-1349)
scaffold0552 (334-422)||(1136-1225)
[»] scaffold0016 (1 HSPs)
scaffold0016 (189-229)||(120569-120609)
[»] scaffold0691 (1 HSPs)
scaffold0691 (104-188)||(4252-4336)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 31249243 - 31248989
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249243 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 31249144  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249143 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 31249044  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31249043 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 31248989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 35201855 - 35201601
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201855 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 35201756  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201755 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 35201656  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35201655 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 35201601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 13883128 - 13883382
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883128 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 13883227  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883228 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 13883327  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13883328 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 13883382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 30975228 - 30974974
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  30975228 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30975129  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30975128 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 30975029  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30975028 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 30974974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 30981667 - 30981413
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  30981667 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30981568  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30981567 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 30981468  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30981467 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 30981413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 30987831 - 30987577
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  30987831 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30987732  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30987731 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 30987632  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30987631 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 30987577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 35209090 - 35208836
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35209090 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacaatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 35208991  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35208990 tttttcgtgccacgatgaagcctcaacgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 35208891  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35208890 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 35208836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 188 - 443
Target Start/End: Complemental strand, 26887755 - 26887499
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26887755 gtgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgg 26887656  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaagg 386  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  26887655 aaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttataagg 26887556  T
Q  387 gtttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26887555 gtttactttccactataaatacagccttgtatcagatgataaaagcgtgtagaaaaa 26887499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 13878380 - 13878634
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  13878380 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccatgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 13878479  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  ||||||||||||||||     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13878480 aaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 13878579  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13878580 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 13878634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 16785572 - 16785826
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16785572 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatcgaaaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 16785671  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  | ||||||||||||||     ||| |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16785672 aaaattgtgccacgatgaagcagggtcgtgccacgatggtcgcactgaagataaaaataaaatgtattttcatttagatttgtttcagttttttaagggt 16785771  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16785772 ttactttccactataaatacagccttgtagcagatgataaaagtgtgtagaaaaa 16785826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 17695382 - 17695128
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  17695382 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 17695283  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    | ||| |||||||||||||| | ||||| |||||||||| |||||||||||||    ||||||||||||||| |||||||||||||||||||||||||||    
T  17695282 atttttgtgccacgatgaagccgcatcgtgccacgatggccgcgctgaagatatttttaaaacgtattttcaattagatttgtttcagttttttaagggt 17695183  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  17695182 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 17695128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 25466431 - 25466176
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||| || |||||||||||||||   |||||  ||||||    
T  25466431 tgtgagagttaacttaaaatcagaaatctagagaatcatgccacgatggagaagcatcgtgccacaattgttgaagcaagattctaaggaagctactgga 25466332  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||| | ||||  |||||||||||  |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  25466331 aatttcgtgccacgatgaagccgcatcatgccacgatggtatcgctgaagataaaaataaaacgtactttcagcatagatttgtttcagttttttaaggg 25466232  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  25466231 tttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 25466176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 202 - 443
Target Start/End: Original strand, 25941330 - 25941550
Alignment:
Q  202 ttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccac 301  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||      
T  25941330 ttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcgtgcc-- 25941427  T
Q  302 gatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccacta 401  Q
                       |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25941428 -------------------acgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccacta 25941508  T
Q  402 taaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||  |||||||||||||||||| ||||||||||| ||||    
T  25941509 taaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 25941550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 189 - 420
Target Start/End: Original strand, 26084725 - 26084957
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  26084725 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 26084824  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  ||||||||||||  |  | ||||| | ||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  26084825 aaaatcgtgccacgattgaatcgcatcgtggcacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 26084923  T
Q  387 gtttactttccactataaatacag-ccttgtatca 420  Q
    | ||||||| ||||||||||| || ||||||||||    
T  26084924 gattacttt-cactataaatatagaccttgtatca 26084957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 420
Target Start/End: Original strand, 26064756 - 26064988
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  ||||  |    
T  26064756 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcacttta 26064855  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    || |||||| ||||||     |  |||| |  |||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  26064856 aaattcgtgtcacgattgtatcgtatcgtgttacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 26064954  T
Q  387 gtttactttccactataaatacag-ccttgtatca 420  Q
    | ||||||| ||||||||||| || ||||||||||    
T  26064955 gattacttt-cactataaatatagaccttgtatca 26064988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 28241860 - 28241626
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| |||||||| |||| ||||| | | ||||| | ||||||||    
T  28241860 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaa-agttctgggcaaacactgga 28241762  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcag-ttttttaag 385  Q
    ||  ||||||||||||     |  |||| |||||||| || |||  ||||||||||||||||||||||||| | |  | ||||||||||| |||||||||    
T  28241761 aaaatcgtgccacgattgtatcgaatcgtgccacgatagt-gcgattgaagataaaaataaaacgtatttttattgaaaatttgtttcagtttttttaag 28241663  T
Q  386 ggtttactttccactataaatacag-ccttgtatcaga 422  Q
    || ||||||| ||||||||||| || ||||||||||||    
T  28241662 ggattacttt-cactataaatatagaccttgtatcaga 28241626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 1230767 - 1230684
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  1230767 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 1230684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 443
Target Start/End: Complemental strand, 22343331 - 22343078
Alignment:
Q  193 agagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatt 292  Q
    ||||||||||||||||||||| ||||||| |||  |||||||||||||||| ||| |||||||| |||||||||| | ||  | | |  || ||||||      
T  22343331 agagttaacttaaaatcagaattctggagaatcaagccacgatggagaagcttcgtgccacgattgttgaagcaaaactctggagcattcattggaaaaa 22343232  T
Q  293 tcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcag--ttttttaagggt 388  Q
    ||||||||||||     |  ||||  |||||||||| |||  |||||||||||| |||||||||||| | |  |||||||||||||  |||||||||||     
T  22343231 tcgtgccacgattggatcaaatcgtaccacgatggt-gcgattgaagataaaaacaaaacgtatttttattgaagatttgtttcagttttttttaagggg 22343133  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||| |||||||||  |||||||||||| ||||| ||||||||||| ||||    
T  22343132 ttactttcccctataaatataagccttgtatcatatgat-aaagtgtgtagaaaaa 22343078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 22352386 - 22352129
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||  || ||| ||| ||||||| || |||||||||| ||| |||||||| |||||| ||| ||||  | | |  |||||||    
T  22352386 tgtgagagttaacttaaaatctaaattctagagaatcgtgctacaatggagaagcttcgtgccacgattgttgaatcaaaattctggagcattcactgga 22352287  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagtttttt--aa 384  Q
    ||  | ||||||||||     |  |||| ||||||||||| ||| | ||||||||||| |||||||||||| | | | ||||||||||||||||||  ||    
T  22352286 aaaattgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaacaaaacgtatttttattgaagatttgtttcagttttttttaa 22352188  T
Q  385 gggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||| |||||||||||||||||||  | |||||||||||||||| ||||||||||| ||||    
T  22352187 ggggttactttccactataaatataaaccttgtatcagatgat-aaagtgtgtagaaaaa 22352129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 305
Target Start/End: Original strand, 26642828 - 26642945
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||| | || || ||||| |||||| ||||||||    | || ||||||    
T  26642828 gtgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactgg 26642927  T
Q  288 aaatttcgtgccacgatg 305  Q
    ||| ||||||| ||||||    
T  26642928 aaacttcgtgcaacgatg 26642945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 305
Target Start/End: Original strand, 26748794 - 26748911
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||| | || || ||||| |||||| ||||||||    | || ||||||    
T  26748794 gtgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactgg 26748893  T
Q  288 aaatttcgtgccacgatg 305  Q
    ||| ||||||| ||||||    
T  26748894 aaacttcgtgcaacgatg 26748911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 13468036 - 13467955
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 270  Q
    ||||||||||||||||||||||| ||| ||||| | | | |||||||||||||||| || |||||||| |||||||||||||    
T  13468036 tgtgagagttaacttaaaatcaggaatttggagaaacataccacgatggagaagcaacgtgccacgattgttgaagcaagat 13467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 1230643 - 1230556
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaatacag-ccttgtatca 420  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||    
T  1230643 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatatagaccttgtatca 1230556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 33215499 - 33215545
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 235  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33215499 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgat 33215545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 443
Target Start/End: Original strand, 33215533 - 33215732
Alignment:
Q  244 atcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaa 343  Q
    |||| |||||||| ||||||| |||||||    | || |||||||||  |||||||||||||||  | || || | |||||||||  |  ||| ||||||    
T  33215533 atcgtgccacgattgttgaagaaagattctgaagcagtcactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtaccattgaggataaa 33215632  T
Q  344 aataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtaggaa 441  Q
    |   ||||||||||||||| | |||||||| || ||||| ||||| |||||||| |||||||||| | ||||||| ||||||||| ||||||||||| ||    
T  33215633 acagaaacgtattttcagtgaagatttgttccaatttttaaaggggttactttc-actataaatataagccttgtgtcagatgat-aaagtgtgtagaaa 33215730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 15533220 - 15533145
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 264  Q
    ||||||||||||||||||||||| | |||  || | ||||||||||||||||||||| || ||||||||||||||||    
T  15533220 tgtgagagttaacttaaaatcagga-tctacagaaatcgtgccacgatggagaagcaacgtgccacgatggttgaag 15533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 443
Target Start/End: Complemental strand, 13467803 - 13467740
Alignment:
Q  379 ttttaagggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||| |||||||||||||||||  |||||||||||| ||||| ||||||||||| ||||    
T  13467803 ttttaagggtt-actttccactataaatataagccttgtatcaaatgat-aaagtgtgtagaaaaa 13467740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 14507716 - 14507668
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 237  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 14507668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 7069433 - 7069687
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7069433 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 7069532  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7069533 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 7069632  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7069633 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 7069687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 7074440 - 7074694
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7074440 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgtgccacgatggttgaagcaagattcctgggaagacactgga 7074539  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7074540 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 7074639  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7074640 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 7074694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 25405046 - 25405300
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405046 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 25405145  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405146 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 25405245  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25405246 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 25405300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 195 - 443
Target Start/End: Complemental strand, 3320573 - 3320325
Alignment:
Q  195 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttc 294  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3320573 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagccactggaaatttc 3320474  T
Q  295 gtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactt 394  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3320473 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactt 3320374  T
Q  395 tccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  3320373 tctactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 3320325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 195 - 443
Target Start/End: Complemental strand, 3325321 - 3325073
Alignment:
Q  195 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttc 294  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  3325321 agttaacttaaaatcagaaatctgaagcatcgtgccacgatggagaagcatcgcaccacgatggttgaagcaagattcctgggaagccactggaaatttc 3325222  T
Q  295 gtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactt 394  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3325221 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactt 3325122  T
Q  395 tccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  3325121 tctactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 3325073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 188 - 443
Target Start/End: Complemental strand, 44513058 - 44512802
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    ||||||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  44513058 gtgtgagagttaacttaaaatcaaaattctggagaattgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 44512959  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    || |||||||||||||||||| | ||||| |||||||||| |||||||||||||    |||||||||||||||||  |||||||||||||||||||||||    
T  44512958 aattttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagatatttttaaaacgtattttcagtaaagatttgtttcagttttttaagg 44512859  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||  |||||||||| ||||||| ||||||||||| ||||    
T  44512858 gtttactttccactataaatataagccttgtataagatgat-aaagtgtgtagaaaaa 44512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 188 - 438
Target Start/End: Original strand, 25351004 - 25351254
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactg 286  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| ||||| |||||  ||||    
T  25351004 gtgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaaga-tcctgaggaagctactg 25351102  T
Q  287 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 386  Q
    ||| |||||||||||||||||| | ||||| ||||||||||   |||||||||||    |||||| ||||||||||||||||||||||||||||||||||    
T  25351103 gaattttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagg 25351202  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    |||||||||||||||||||||  |||||| ||||||||||| |||||||||||    
T  25351203 gtttactttccactataaatataagccttatatcagatgat-aaagtgtgtag 25351254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 188 - 438
Target Start/End: Original strand, 25356698 - 25356948
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactg 286  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| ||||| |||||  ||||    
T  25356698 gtgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaaga-tcctgaggaagctactg 25356796  T
Q  287 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 386  Q
    ||| |||||||||||||||||| | ||||| ||||||||||      ||||||||    |||||| ||||||||||||||||||||||||||||||||||    
T  25356797 gaattttcgtgccacgatgaagccgcatcgtgccacgatggaaaaaatgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagg 25356896  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    |||||||||||||||||||||  |||||| ||||||||||| |||||||||||    
T  25356897 gtttactttccactataaatataagccttatatcagatgat-aaagtgtgtag 25356948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 188 - 443
Target Start/End: Complemental strand, 34547374 - 34547140
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  34547374 gtgtgagagttaacttaaaatcagaaatctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 34547275  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 387  Q
    || |||||||||                     |||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34547274 aattttcgtgcc---------------------acgatggcatcgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 34547196  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||  || ||||||||||||||| ||||||||||| ||||    
T  34547195 tttactttccactataaatataagtcttgtatcagatgat-aaagtgtgtagaaaaa 34547140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 189 - 429
Target Start/End: Original strand, 30246642 - 30246862
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||   |||||  | ||||    
T  30246642 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcattgcgccacgattgttgaagcaagattctgaggaagctattgga 30246741  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||                     |||| |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||    
T  30246742 aatttcgtgccacg---------------------atggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttcagttttttaagggt 30246820  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaa 429  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  30246821 ttactttccactataaatataagccttgtatcagatgataaa 30246862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 7465029 - 7464913
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  7465029 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 7464930  T
Q  289 aatttcgtgccacgatg 305  Q
    |||||||||||||||||    
T  7464929 aatttcgtgccacgatg 7464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 195 - 438
Target Start/End: Original strand, 25409809 - 25410031
Alignment:
Q  195 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactggaaattt 293  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| || ||||| |||| |||||  ||||||| |||    
T  25409809 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttggaggaagat-cctgaggaagctactggaatttt 25409907  T
Q  294 cgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttact 393  Q
    ||||||                     |||||||   |||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25409908 cgtgcc---------------------acgatggcatcgctgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagggtttact 25409986  T
Q  394 ttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||    
T  25409987 ttccactataaatataagccttgtatcagatgat-aaagtgtgtag 25410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 8378949 - 8378833
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  8378949 tgtgagagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 8378850  T
Q  289 aatttcgtgccacgatg 305  Q
    ||||||||| |||||||    
T  8378849 aatttcgtggcacgatg 8378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 407
Target Start/End: Original strand, 40946076 - 40946292
Alignment:
Q  191 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 290  Q
    ||||||||||||||||||||||| |||| || |||||||||||||| |||||| ||| |||||||| |||||||||| ||||  | | |  |||||||||    
T  40946076 tgagagttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 40946175  T
Q  291 tttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggt 388  Q
      ||||| ||||||     |  |||| ||||||||||| |||  |||||||||||||||||| |||||| | |  ||||||||||||||||||||||||     
T  40946176 aatcgtgtcacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacatatttttattgaagatttgtttcagttttttaaggga 40946274  T
Q  389 ttactttccactataaata 407  Q
    ||||||| |||||||||||    
T  40946275 ttacttt-cactataaata 40946292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 7464921 - 7464795
Alignment:
Q  318 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttaga-tttgtttcagttttttaagggtttactttccactataaata-cagccttg 415  Q
    |||||||||| |||||| |||||||   ||||||||||||||||  | | |||||||||||||||||||||||||||||||||||||||||  || ||||    
T  7464921 gccacgatggacgcgctcaagataattttaaaacgtattttcagcaaaaatttgtttcagttttttaagggtttactttccactataaatataagtcttg 7464822  T
Q  416 tatcagatgataaaagtgtgtaggaaaa 443  Q
    ||| ||||||| ||||||||||| ||||    
T  7464821 tataagatgat-aaagtgtgtagaaaaa 7464795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 409
Target Start/End: Original strand, 2120626 - 2120791
Alignment:
Q  244 atcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaa 343  Q
    ||||||||||||| | |||||||| ||||   |||||   ||||||||||||| ||||||||    |  |||| | ||||||||||||||||||||||      
T  2120626 atcgcgccacgattggtgaagcaaaattctgaggaagtttctggaaatttcgtaccacgatggctccgtatcgtggcacgatggtcgcgctgaagatatt 2120725  T
Q  344 aataaaacgtattttc-agttagatttgtttcagttttttaagggtttactttccactataaataca 409  Q
      |||||||||||||  ||  |||||||||||||||||||||||| ||||| |||||||||||||||    
T  2120726 tttaaaacgtattttttagcaagatttgtttcagttttttaaggg-ttactctccactataaataca 2120791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 44144438 - 44144357
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 270  Q
    ||||||||||||||||||||||| ||||| ||| | ||||||||||||||||| || || |||||||| |||||| ||||||    
T  44144438 tgtgagagttaacttaaaatcaggaatctagagaaacgtgccacgatggagaaacaacgtgccacgattgttgaaacaagat 44144357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 8378829 - 8378781
Alignment:
Q  395 tccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8378829 tccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 8378781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 421
Target Start/End: Original strand, 48457544 - 48457632
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaatacag-ccttgtatcag 421  Q
    ||||||| ||||||||||||||||| | | | ||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||    
T  48457544 tgaagattaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatatagaccttgtatcag 48457632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 2120591 - 2120638
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 235  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  2120591 gtgtgagagttaacttaaaatcagaattctggagtatcgcgccacgat 2120638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 48457440 - 48457487
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 235  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  48457440 gtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 48457487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 443
Target Start/End: Complemental strand, 15541305 - 15541270
Alignment:
Q  408 cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15541305 cagccttgtatcagatgataaaagtgtgtagaaaaa 15541270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 3878322 - 3878370
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 237  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 3878370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 44144236 - 44144147
Alignment:
Q  348 aaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    ||||||||||||||| | |||||||| || | ||||||||||| |||||||||||||||||  || ||||||||||| ||| |||||||||||    
T  44144236 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttccactataaatataagtcttgtatcagacgat-aaagtgtgtag 44144147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 243; Significance: 1e-134; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 11853202 - 11853456
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11853202 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacattgga 11853301  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853302 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 11853401  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11853402 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 11853456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 18586616 - 18586871
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||   |||||  ||||||    
T  18586616 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattctgaggaagctactgga 18586715  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    ||  | |||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18586716 aaaattgtgccacgatgaagccgcatcgtgccatgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 18586815  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  18586816 tttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 18586871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 187 - 438
Target Start/End: Original strand, 16488999 - 16489250
Alignment:
Q  187 ggtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactg 286  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   || ||  ||||    
T  16488999 ggtgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactg 16489098  T
Q  287 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 386  Q
    ||| |||||||||| ||||||| | ||||| |||||||||| || ||||||||||    ||||||||||||||||||||||||||||||||||||||||     
T  16489099 gaattttcgtgccatgatgaagccgcatcgtgccacgatggacgtgctgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaaga 16489198  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    |||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  16489199 gtttactttccactatgaatataagccttgtatcagatgat-aaagtgtgtag 16489250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 31300074 - 31300329
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||   |||||  ||||||    
T  31300074 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgaggaagctactgga 31300173  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||  |  | || | ||||||||    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31300174 aatttcgtgccacgatgaatccgtaacgtggcacgatggcattgctgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggg 31300273  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
     |||||||||||||||||||  ||| |||||||| ||||| ||||||||||| ||||    
T  31300274 gttactttccactataaatataagctttgtatcatatgat-aaagtgtgtagaaaaa 31300329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 189 - 422
Target Start/End: Original strand, 40636868 - 40637102
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  40636868 tgtgagagttaacttaaaatcagaattttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 40636967  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||| | ||||| |||||||||| |||||||||||||    ||||||||| |||||||| ||||||||||||||||||||||||    
T  40636968 aatttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagatatttttaaaacgtatttttcagtcagatttgtttcagttttttaaggg 40637067  T
Q  388 tttactttccactataaatacag-ccttgtatcaga 422  Q
     ||||||| ||||||||||| || ||||||||||||    
T  40637068 attacttt-cactataaatatagaccttgtatcaga 40637102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 188 - 443
Target Start/End: Original strand, 8528917 - 8529172
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  8528917 gtgtgagagttaacttaaaatcagatttctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 8529016  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagg 386  Q
    |||  |||||||||||||||| | ||||| ||||||||||| |||  ||||||||    |||||| ||||||||||||||||||||||||||||||||||    
T  8529017 aaaaatcgtgccacgatgaagccgcatcgtgccacgatggt-gcgattgaagatatttttaaaacatattttcagttagatttgtttcagttttttaagg 8529115  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    || ||||||||||||||||||  ||| ||||||||||| || ||||||||||| ||||    
T  8529116 gtatactttccactataaatataagctttgtatcagatcat-aaagtgtgtagaaaaa 8529172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 15316630 - 15316863
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||  ||| ||    
T  15316630 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgaggaagctactaga 15316729  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||                     |||| |||||||||||||    ||||||||||||||||| |||||||||| ||||||||||||||    
T  15316730 aatttcgtgccacg---------------------atggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttaagttttttaagggt 15316808  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||| | ||||||||||| ||||    
T  15316809 ttactttccactataaatataagccttgtatcagatggt-aaagtgtgtagaaaaa 15316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 4556585 - 4556336
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |  |||||||| ||||||  ||| |||    ||||   | |||    
T  4556585 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagcaacatgccacgattgttgaaataagtttct---gaag---cagga 4556492  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagg 386  Q
    ||  |||||||||||||||  | || || | ||||||||| ||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4556491 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggt-gcgattgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaagg 4556393  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    | |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  4556392 ggttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 4556336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 189 - 407
Target Start/End: Original strand, 15311994 - 15312191
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||   |||||  |||| |    
T  15311994 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattctaaggaagctactgaa 15312093  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||| |||                     |||| |||||||||||||    || |||||||||||||| | |||||||||||||||||||||||    
T  15312094 aatttcgtgcaacg---------------------atggacgcgctgaagatatttttataacgtattttcagtcatatttgtttcagttttttaagggt 15312172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 4884531 - 4884779
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||| |||||||||||||||    | || |||||||    
T  4884531 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgtcacgattgttgaagcaagattctaaagcagtcactgga 4884630  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttc-agttttttaagg 386  Q
    ||  | |||||||||||||    || || | ||||||        ||| |||||||| ||||||||||||||||  ||||||||||| | |||||||| |    
T  4884631 aaaattgtgccacgatgaaattgcaacgtggcacgat--------tgaggataaaaacaaaacgtattttcagtgaagatttgtttcaatttttttaaag 4884722  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    | |||||||||| ||||||||  |||||||||||||||||| ||||||||||| ||||    
T  4884723 ggttactttccattataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 4884779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 15830817 - 15830929
Alignment:
Q  193 agagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatt 292  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||   || ||  ||||||||||    
T  15830817 agagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgagggagctactggaaatt 15830916  T
Q  293 tcgtgccacgatg 305  Q
    |||||||||||||    
T  15830917 tcgtgccacgatg 15830929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 346 - 443
Target Start/End: Original strand, 15830949 - 15831046
Alignment:
Q  346 taaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  15830949 taaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 15831046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 16689472 - 16689217
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| |||  || |||| ||||||||||| ||     | || |||||||    
T  16689472 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagc-tcgttccgcgattgttgaagcaagtttttgaagcagtcactgga 16689374  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtatttt-cagtta-gatttgtttcagttttttaag 385  Q
    ||  |||||||||||||||  | || || | ||||||||| ||| | || |||||||  |||||||||||| |||| | ||||||||||| |||||||||    
T  16689373 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggt-gcgattgaggataaaataaaaacgtatttttcagtgaagatttgtttcaattttttaag 16689275  T
Q  386 ggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    || |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  16689274 gggttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 16689217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 189 - 422
Target Start/End: Original strand, 47868195 - 47868429
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| | ||| || |||||||||| |||   | | |  |||||||    
T  47868195 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgtcaccattgttgaagcaaaattttggagcaatcactgga 47868294  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  ||||||||||||     || |||| |||||||| || |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  47868295 aaaatcgtgccacgattggatctaatcgtgccacgatagt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 47868393  T
Q  387 gtttactttccactataaatacag-ccttgtatcaga 422  Q
    | ||||||| ||||||||||| || ||||||||||||    
T  47868394 gattacttt-cactataaatatagaccttgtatcaga 47868429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 407
Target Start/End: Complemental strand, 8631963 - 8631744
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctggga-agacactg 286  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||| |||| | |  ||||     
T  8631963 gtgtcagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaatt-ctggaacaatcacta 8631865  T
Q  287 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaa 384  Q
     |||  |||||||| |||     |  |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||    
T  8631864 aaaaaatcgtgccaagattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaa 8631766  T
Q  385 gggtttactttccactataaata 407  Q
    ||| ||||||| |||||||||||    
T  8631765 gggattacttt-cactataaata 8631744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 6764654 - 6764737
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||| |||||||||| ||||    
T  6764654 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattc 6764737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 305
Target Start/End: Complemental strand, 2485390 - 2485277
Alignment:
Q  191 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 290  Q
    ||||||||||||||||||||||  || |||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||||    
T  2485390 tgagagttaacttaaaatcagat-tcaggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 2485292  T
Q  291 tttcgtgccacgatg 305  Q
      |||||||||||||    
T  2485291 aatcgtgccacgatg 2485277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 25699401 - 25699518
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 286  Q
    ||||||||||||||||||||||| |||| | || |  ||||||||||||||||||| || |||||||| |||||| ||||| |||||  | ||| |||||    
T  25699401 tgtgagagttaacttaaaatcaggaatcagaagaaatgtgccacgatggagaagcaacgtgccacgattgttgaaacaaga-tcctgaagcaagtcactg 25699499  T
Q  287 gaaatttcgtgccacgatg 305  Q
    |||| |||||| |||||||    
T  25699500 gaaaattcgtgacacgatg 25699518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 6764778 - 6764867
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttactttccactataaatacag-ccttgtatcaga 422  Q
    ||||||||||||||||||||||||| | |  |||||||||||| ||||||||||| ||||||| ||||||||||| || ||||||||||||    
T  6764778 tgaagataaaaataaaacgtatttttattgaagatttgtttcatttttttaagggattacttt-cactataaatatagaccttgtatcaga 6764867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 7050802 - 7050722
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaaga 269  Q
    ||||||||| | ||||||||||| ||||||||| | ||||||||||| |||||||| || |||||||| |||||| |||||    
T  7050802 tgtgagagtcagcttaaaatcaggaatctggagaaacgtgccacgatagagaagcaacgtgccacgattgttgaaacaaga 7050722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 26086292 - 26086240
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaa 241  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  26086292 tgtgagagttaacttaaaatcagaattctagagaatcgtgccacgatggagaa 26086240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 422
Target Start/End: Complemental strand, 2485269 - 2485178
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagt-tagatttgtttcag--ttttttaagggtttactttccactataaatacag-ccttgtatcaga 422  Q
    ||||||||||||||||||||||||| | |  |||||||||||||  ||||||||||| ||||||| ||||||||||| || ||||||||||||    
T  2485269 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttttaagggattacttt-cactataaatatagaccttgtatcaga 2485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 4569723 - 4569755
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggag 221  Q
    ||||||||||||||||||||||| |||||||||    
T  4569723 tgtgagagttaacttaaaatcaggaatctggag 4569755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 4569907 - 4569995
Alignment:
Q  348 aaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtag 438  Q
    ||||||||||||||| | |||||||| || | ||||||||||| |||||| |||||||||| | ||||||||||||||||| |||||||||||    
T  4569907 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttc-actataaatataagccttgtatcagatgat-aaagtgtgtag 4569995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 25684296 - 25684550
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684296 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 25684395  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684396 aatttcgtgccacgatgaagacgcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 25684495  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  25684496 ttactttccactataaatacaaccttgtatcagatgataaaagtgtgtagaaaaa 25684550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 4813018 - 4812762
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4813018 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 4812919  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta--ttttcagttagatttgtttcagttttttaagg 386  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  4812918 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaacaaaacgtattttttcagttagatttgtttcagttttttaagg 4812819  T
Q  387 gtttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4812818 gtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 4812762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 28327561 - 28327815
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28327561 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattcctgggaagacactgga 28327660  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28327661 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 28327760  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28327761 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 28327815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 28332284 - 28332538
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28332284 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattcctgggaagacactgga 28332383  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28332384 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 28332483  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28332484 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 28332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 189 - 445
Target Start/End: Complemental strand, 16753052 - 16752796
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||    
T  16753052 tgtgagacttaacttaaaatcagaaatctggagcatcgtgccacgatagagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 16752953  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  ||||||||||||||||     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16752952 aaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 16752853  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaaac 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16752852 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaaac 16752796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 28895153 - 28895407
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||| |||||||||||| | || | ||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  28895153 tgtgagacttaacttaaaataaaaattttggagaatcgtgccacgatgtagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 28895252  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  ||||||||||||||||      || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28895253 aaaatcgtgccacgatgaagcagtgccgtgccacgatggtcgcggtgaagataaaaataaaacgtattttcagttagatttgtttcagtttttaaagggt 28895352  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  28895353 ttactttccactataaatacagccttgtatcagatgataaaagggtgtagaaaaa 28895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 189 - 445
Target Start/End: Complemental strand, 16757776 - 16757541
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||    
T  16757776 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 16757677  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  ||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16757676 aaaatcgtgc---------------------cacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 16757598  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaaac 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16757597 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaaac 16757541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 29555317 - 29555062
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||   || ||  | ||||    
T  29555317 tgtgagagttaacttaaaatcagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctattgga 29555218  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttt-cagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||      ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29555217 aatttcgtgccacgatggccctgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 29555118  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||| |||||||||||  ||| |||||||||||||| ||||||||||| ||||    
T  29555117 tttacttttcactataaatataagcgttgtatcagatgat-aaagtgtgtagaaaaa 29555062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 189 - 429
Target Start/End: Original strand, 590466 - 590686
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  590466 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgataaagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 590565  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  590566 aatttcgtgccacg---------------------atggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 590644  T
Q  389 ttactttccactataaat-acagccttgtatcagatgataaa 429  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  590645 ttactttccactataaatctaagccttgtatcagatgataaa 590686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 9021638 - 9021384
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||  ||||||    
T  9021638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgaggaagctactgga 9021539  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 387  Q
    | |||||||||||||||||| | ||| | |||||||||||  | ||||||||||   |||||||||||||||| ||||||||||||||||||||||||||    
T  9021538 attttcgtgccacgatgaagccgcattgtgccacgatggtatcactgaagataattttaaaacgtattttcagtttagatttgtttcagttttttaaggg 9021439  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  9021438 tttacttt-cactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 9021384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 21033520 - 21033775
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||  ||| |||||| |||||||||||||||||||||| || |||||||| ||||||||||| ||     | || |||||||    
T  21033520 tgtgagagttaacttaaaatctaaaaactggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagtttgtgaagcagtcactgga 21033619  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagg 386  Q
    ||  ||||||||| ||  |  |  |||| ||||||||||| ||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  21033620 aaaatcgtgccacaattgaatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaagg 21033718  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    | |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  21033719 ggttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 21033775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 188 - 422
Target Start/End: Complemental strand, 22685206 - 22684971
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    ||||| || ||||||||||||||||| |||| || |||||||||||||| |||||| ||| |||||||| |||||| ||| ||||  | | |  ||||||    
T  22685206 gtgtgggacttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaaccaaaattctggagcaatcactgg 22685107  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaag 385  Q
    |||  | ||||||||||  |  |  |||| ||||||||||| ||| | |||||||||||||||||||||||| | | | |||||||||||||||||||||    
T  22685106 aaaaattgtgccacgatcgaatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaag 22685008  T
Q  386 ggtttactttccactataaatacag-ccttgtatcaga 422  Q
    || ||||||| ||||||||||| || ||||||||||||    
T  22685007 ggattacttt-cactataaatatagaccttgtatcaga 22684971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 3275955 - 3276035
Alignment:
Q  192 gagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||  | |||||||| |||||||||||||||    
T  3275955 gagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaagcaatgtgccacgattgttgaagcaagattc 3276035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 23180091 - 23180008
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || | ||| |||||| ||||||||    
T  23180091 tgtgagagttaacttaaaatcaggaatctggagaatcgtgctacgatggagaagcatcgtgctatgattgttgaaacaagattc 23180008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 10208530 - 10208275
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10208530 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactgga 10208431  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  10208430 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgttttagttttttaaggg 10208331  T
Q  388 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10208330 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 10208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 10201484 - 10201229
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10201484 tgtgagatttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 10201385  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10201384 aatttcgtgccacaatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10201285  T
Q  388 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10201284 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 10201229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 10100621 - 10100366
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10100621 tgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactgga 10100522  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10100521 aatttcgtgccacgatgaagactcatcgcgccacgatgatcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10100422  T
Q  388 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  10100421 tttactttccacgataaattcagccttgtatcagatgataaaagtgtgtagaaaaa 10100366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 10094598 - 10094349
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10094598 tgtgagagttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgtcacgatggttgaagcaagattcctgggaagacactgga 10094499  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10094498 aatttcgtgccacgatgaagactcatcgtgccacgatggtcgc------tataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10094405  T
Q  388 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10094404 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 10094349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 29914484 - 29914230
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  29914484 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 29914385  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||    | ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29914384 aatttcgtgccacgatggctccgcatcgtgccacgatggtcgcattgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 29914285  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29914284 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 29914230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 16461853 - 16462108
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||    
T  16461853 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgga 16461952  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagat-aaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 387  Q
    ||  |||||||||||||||| | ||||| ||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16461953 aaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaaataaaacgtattttcagttagatttgtttcagttttttaaggg 16462052  T
Q  388 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16462053 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 16462108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 10896655 - 10896910
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||  ||||||    
T  10896655 tgtgagagttaacttaaaatcagaaatatggagtatcgtgccacgatggagaagcatcgcgccacgattgctgaagcatggttcctaggaagctactgga 10896754  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10896755 aatttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaaggg 10896854  T
Q  388 tttactttccactataaatac-agccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||| || || ||||||||||||||| ||||||||||| ||||    
T  10896855 tttactttccactataaagacaagtcttgtatcagatgat-aaagtgtgtagaaaaa 10896910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 190 - 443
Target Start/End: Original strand, 54188160 - 54188413
Alignment:
Q  190 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactgga 288  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||  ||||||    
T  54188160 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagat-cctgaggaagctactgga 54188258  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54188259 tttttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 54188358  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||||||||| ||||    
T  54188359 ttactttccactataaatataagccttgtatcaggtgat-aaagtgtgtagaaaaa 54188413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 5858197 - 5858451
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   || ||  ||||||    
T  5858197 tgtgagagttaacttaaaatcaggaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgga 5858296  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||    | ||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  5858297 aatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctaaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 5858396  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  5858397 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 5858451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 2820681 - 2820514
Alignment:
Q  21 agggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcg 120  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2820681 agggtacctccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacagatatactttactctattcaagcg 2820582  T
Q  121 actgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtagg 188  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2820581 actgaggttcagtctcttcaattttagaaaccctccaattcgaaaatgcaaaatttcaccatcgtagg 2820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 241 - 443
Target Start/End: Original strand, 6303015 - 6303217
Alignment:
Q  241 agcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagat 340  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||     ||| |||||||||||||||||||||||    
T  6303015 agcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagat 6303114  T
Q  341 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagga 440  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6303115 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaa 6303214  T
Q  441 aaa 443  Q
    |||    
T  6303215 aaa 6303217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 244 - 445
Target Start/End: Original strand, 27543980 - 27544181
Alignment:
Q  244 atcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaa 343  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||     ||| ||||||||||||||||||||||||||    
T  27543980 atcgtgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaa 27544079  T
Q  344 aataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27544080 aataaaacgtattttcagtaagatttgtttcagttttttaagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 27544179  T
Q  444 ac 445  Q
    ||    
T  27544180 ac 27544181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 189 - 396
Target Start/End: Complemental strand, 22627695 - 22627488
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||   |||||  ||||||    
T  22627695 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatctcgccacgattgttgaagcaagattctgaggaagctactgga 22627596  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  |||||||||||||||| |   ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22627595 aaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatctgtttcagttttttaagggt 22627496  T
Q  389 ttactttc 396  Q
    ||||||||    
T  22627495 ttactttc 22627488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 47878681 - 47878448
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  47878681 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 47878582  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878581 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 47878503  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  47878502 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 47878448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 189 - 370
Target Start/End: Complemental strand, 29963637 - 29963456
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  29963637 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 29963538  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttg 370  Q
    |||||||||||||||||    | ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29963537 aatttcgtgccacgatggctccgcatcgtgccacgatggtcgcattgaagataaaaataaaacgtattttcagttagatttg 29963456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 205 - 443
Target Start/End: Complemental strand, 10613293 - 10613055
Alignment:
Q  205 aaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgat 304  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||   |||||  |||||||||||| |||||||||    
T  10613293 aaatcagaaatctggagaatcgtgccacgatggagaaacatcgcaccacgattgttgaagcaagattctgaggaagctactggaaatttcatgccacgat 10613194  T
Q  305 gaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataa 404  Q
    |      ||||| |||||||||| ||| |||||||||    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10613193 ggcccgacatcgtgccacgatggacgcactgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagtgtttactttccactataa 10613094  T
Q  405 ata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||  |||||||||||| ||||| ||||||||||| ||||    
T  10613093 atataagccttgtatcatatgat-aaagtgtgtagaaaaa 10613055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 54192897 - 54193130
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |   |||||  ||||||    
T  54192897 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagatcctaaggaagctactgga 54192996  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||| ||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54192997 tttttcgtgccatga---------------------tggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 54193075  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
     ||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  54193076 gtactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 54193130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 2761316 - 2761168
Alignment:
Q  40 ggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttc 139  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||||||||||||    
T  2761316 ggggattctgtccatgttcagatattcaagagagatcaaagttccttcgtctataaggatagaatttaccctattcaagcgcctgaggttcagtctcttc 2761217  T
Q  140 aattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtagg 188  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2761216 aactttagaaaccctccaatttgaaaatgcaaaatttcaccatcatagg 2761168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 189 - 427
Target Start/End: Complemental strand, 10595541 - 10595323
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||   |||||  ||||||    
T  10595541 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaaacattgcgccacgattgttgaagcaagattctgaggaagctactgga 10595442  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||||| ||                     ||||||||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  10595441 aatttcgtgccacgatggag---------------------gcgctgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagggt 10595363  T
Q  389 ttactttccactataaata-cagccttgtatcagatgata 427  Q
    |||||||||||||||||||  || ||||||||||||||||    
T  10595362 ttactttccactataaatataagtcttgtatcagatgata 10595323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 51727543 - 51727309
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  51727543 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 51727444  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 387  Q
    ||  ||||||||||||     |  |||| |||||||||||     ||||||||||||||||||||||||| | |  ||||||||||||||||||||||||    
T  51727443 aaaatcgtgccacgatttgatcgaatcgtgccacgatggtgtgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaaggg 51727344  T
Q  388 tttactttccactataaatacag-ccttgtatcaga 422  Q
     ||||||| ||||||||||| || ||||||||||||    
T  51727343 attacttt-cactataaatatagaccttgtatcaga 51727309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 4308818 - 4308584
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  4308818 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgga 4308719  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  ||||||||||||     |  |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  4308718 aaaatcgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 4308620  T
Q  387 gtttactttccactataaatacag-ccttgtatcaga 422  Q
    | ||||||| ||||||||||| || ||||||||||||    
T  4308619 gattacttt-cactataaatatagaccttgtatcaga 4308584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 2809389 - 2809221
Alignment:
Q  20 gagggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagc 119  Q
    ||||||||| || |||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |   | ||||||||||||||    
T  2809389 gagggtacctccttcagctggggtattctgtccatggtaagatattcaagagagatcaaagttccttcgtctataaggacagtatgtactctattcaagc 2809290  T
Q  120 gactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtagg 188  Q
    ||||||| |  ||| || ||||||||| |||||| ||| | |||||||| |||||||||||||| ||||    
T  2809289 gactgagatctagtttcctcaattttaaaaacccgccattctgaaaatgtaaaatttcaccatcatagg 2809221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 10901398 - 10901463
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacg 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10901398 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacg 10901463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 27101797 - 27101563
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctggga-agacactgg 287  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  | | |||| ||| |||||||||| ||| |||| | |  ||||||    
T  27101797 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagttttgtgccatgattgttgaagcaaaatt-ctggaacaatcactgg 27101699  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaag 385  Q
    |||  ||||||||||||     |  |||| |||| |||||| |||  ||||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  27101698 aaaaatcgtgccacgattggatcgaatcgtgccaagatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaag 27101600  T
Q  386 ggtttactttccactataaatacag-ccttgtatcaga 422  Q
    || ||||||| ||||||||||| || ||||||||||||    
T  27101599 ggattacttt-cactataaatatagaccttgtatcaga 27101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 25690893 - 25690659
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||  | ||||||||||||||||||||| ||| |||||||| ||||||| || ||||  | | |  |||||||    
T  25690893 tgtgagagttaacttaaaatcagaattctgatgaatcgtgccacgatggagaagcttcgtgccacgattgttgaagaaaaattctggagcaatcactgga 25690794  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  |||||||| |||     |  || | ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  25690793 aaaatcgtgccatgattggatcgaattgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 25690695  T
Q  387 gtttactttccactataaatacag-ccttgtatcaga 422  Q
    | ||||||| ||||||||||| || ||||||||||||    
T  25690694 gattacttt-cactataaatatagaccttgtatcaga 25690659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 407
Target Start/End: Complemental strand, 9605150 - 9604931
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg- 287  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||  ||| |||||||| |||||||||| ||||  | | |  ||||||     
T  9605150 tgtgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaagtttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 9605051  T
Q  288 aaatttcgtgccacga-tgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaa 384  Q
    |||  ||||||||||| ||||  | ||||| | ||||||||| |||  |||||||||||||||||| |||||| | |  |||||||||| ||||||||||    
T  9605050 aaaaatcgtgccacgactgaa-tcgcatcgtggcacgatggt-gcgattgaagataaaaataaaacatatttttattgaagatttgttttagttttttaa 9604953  T
Q  385 gggtttactttccactataaata 407  Q
    ||| ||||||| |||||||||||    
T  9604952 gggattacttt-cactataaata 9604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 10949810 - 10949694
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 286  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| || |||||||| |||||| ||||| |||||  | ||| |||||    
T  10949810 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaaga-tcctgaagcaagtcactg 10949712  T
Q  287 gaaatttcgtgccacgat 304  Q
    |||| |||||||||||||    
T  10949711 gaaaattcgtgccacgat 10949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 420
Target Start/End: Complemental strand, 35918486 - 35918254
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  35918486 tgtgagagttaacttaaaatcagaattatggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagtaatcactgga 35918387  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  ||||  ||||||     |  || | ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||| ||||||| ||||    
T  35918386 aaaatcgtagcacgattggatcgaatagtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgttttagtttttaaagg 35918288  T
Q  387 gtttactttccactataaatacag-ccttgtatca 420  Q
    | ||||||| ||||||||||| || ||||||||||    
T  35918287 gattacttt-cactataaatatagaccttgtatca 35918254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 187 - 305
Target Start/End: Original strand, 43225825 - 43225943
Alignment:
Q  187 ggtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactg 286  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| || ||||| |||||||||| ||||  | | |  |||||    
T  43225825 ggtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgctacgattgttgaagcaaaattctggagcaatcactg 43225924  T
Q  287 gaaatttcgtgccacgatg 305  Q
    ||||  |||||||||||||    
T  43225925 gaaaaatcgtgccacgatg 43225943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 20031882 - 20031764
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggag-aagcatcgcgccacgatggttgaagcaagattcctg--ggaagacact 285  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||  | |||||||| |||||||||||||| |||  ||||| ||||    
T  20031882 tgtgagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaaagcaatgtgccacgattgttgaagcaagatt-ctgaaggaagtcact 20031784  T
Q  286 ggaaatttcgtgccacgatg 305  Q
    |||||  |||||||||||||    
T  20031783 ggaaaaatcgtgccacgatg 20031764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 438
Target Start/End: Complemental strand, 47883412 - 47883163
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 286  Q
    ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||| || | |||||| |||||| ||||| |||||  | ||| |||||    
T  47883412 tgtgagagttaacttaaaatcaggaatttggagaaacgtgccacgatggagaagcaacgtgtcacgattgttgaaacaaga-tcctgatgcaagtcactg 47883314  T
Q  287 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaata-aaacgtattttcagt-tagatttgtttcagttttttaa 384  Q
    |||| |||||||||| ||| |     | || | |||||||||  || |||||| || || | |||||||||||||||  ||||||||| || | ||||||    
T  47883313 gaaaattcgtgccacaatggaattgtaacgtggcacgatggt-acgttgaagaaaataacataaacgtattttcagtgaagatttgttcca-tattttaa 47883216  T
Q  385 gggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    ||| |||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  47883215 ggg-ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtag 47883163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 11079169 - 11079286
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 286  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| || |||||||| ||| ||  |||| |||||  | ||| |||||    
T  11079169 tgtgagagttaacttaaaatcagtaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgtttaaaaaaga-tcctgaagcaagtcactg 11079267  T
Q  287 gaaatttcgtgccacgatg 305  Q
    |||| ||||||||||||||    
T  11079268 gaaaattcgtgccacgatg 11079286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 29956218 - 29956300
Alignment:
Q  190 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||||||||| ||| |||||||| |||||||||| ||||    
T  29956218 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattc 29956300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 30005373 - 30005455
Alignment:
Q  190 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||||||||| ||| |||||||| |||||||||| ||||    
T  30005373 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattc 30005455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 27762557 - 27762476
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 270  Q
    ||||||||||||||||||||||| |||||| || | |||||||||||||||||||| || |||||||| |||||| ||||||    
T  27762557 tgtgagagttaacttaaaatcaggaatctgaagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagat 27762476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 2751080 - 2750954
Alignment:
Q  57 taagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctcc 156  Q
    |||||| ||||||||||| ||||| |||||  |||||| ||||| | |||  |||||||||| |||||||  |||||   |||||| || |||| |||||    
T  2751080 taagattttcaagagagagcaaagctcctttctctataaggatagaatttggtctattcaagtgactgagaatcagttctttcaatatttgaaatcctcc 2750981  T
Q  157 aatttgaaaatgcaaaatttcaccatc 183  Q
    | |||||||||||||||||||||||||    
T  2750980 attttgaaaatgcaaaatttcaccatc 2750954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 2771181 - 2771019
Alignment:
Q  21 agggtacccccatcagttcggggattctgttcatggtaagatattcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcg 120  Q
    |||||||| || |||||| ||||||| | | ||  ||||||| ||||||||||| |||| |||| | ||| |||   ||  | || ||| |||||||||     
T  2771181 agggtacctccttcagttgggggattttttccagtgtaagatgttcaagagagagcaaatttccatggtcaataacaatggagttaactttattcaagca 2771082  T
Q  121 actgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatc 183  Q
    || ||| |||||| || |||||||||||||||||||| |||||||||| ||||||||||||||    
T  2771081 acggagattcagtgtcatcaattttagaaaccctccattttgaaaatgaaaaatttcaccatc 2771019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 27543946 - 27543994
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 237  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27543946 tgtgagagttaacttaaaatcagaaatttggagtatcgtgccacgatgg 27543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 4535262 - 4535345
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||  ||||||||| ||| |  ||||||||||||||| || |||||||| |||||| ||||||||    
T  4535262 tgtgagagttaacttaaaatcatgaatctggagaatcatatcacgatggagaagcaacgtgccacgattgttgaaacaagattc 4535345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 29956529 - 29956602
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata 407  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  29956529 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 29956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 30005684 - 30005757
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata 407  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  30005684 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 30005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 43228156 - 43228229
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata 407  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  43228156 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 43228229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 2853874 - 2853995
Alignment:
Q  65 tcaagagagatcaaagttccttcgtctatacggatatactttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaa 164  Q
    |||||||| ||||||| |||||  |||||| | ||| | |||  ||||||||||  ||||||  |||||   ||||||||| |||| |||||| ||||||    
T  2853874 tcaagagaaatcaaagctcctttctctataagaatagaatttggtctattcaagtaactgagaatcagttctttcaatttttgaaatcctccattttgaa 2853973  T
Q  165 aatgcaaaatttcaccatcgta 186  Q
    ||||||||||||||||||||||    
T  2853974 aatgcaaaatttcaccatcgta 2853995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 6302984 - 6303032
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 237  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  6302984 tgtgagagttaacttaaaatcagaaatctggagcatcgcgccacgatgg 6303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 391 - 443
Target Start/End: Complemental strand, 22626312 - 22626261
Alignment:
Q  391 actttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22626312 actttccactataaatacagccttgtatcagatgat-aaagtgtgtagaaaaa 22626261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 2792352 - 2792273
Alignment:
Q  104 tttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatc 183  Q
    |||||| ||| ||||| || |||||||||| || ||| ||| |||||||||||| |||||||||| ||||||||||||||    
T  2792352 tttactttatacaagcaacggaggttcagtgtcatcagtttaagaaaccctccattttgaaaatgaaaaatttcaccatc 2792273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 2799399 - 2799320
Alignment:
Q  104 tttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatc 183  Q
    |||| |||||||||| | |  ||||||||| | ||||||||||||||||||||| || ||||||| ||||||||||||||    
T  2799399 tttattctattcaagtgtcgaaggttcagtgtgttcaattttagaaaccctccatttcgaaaatgaaaaatttcaccatc 2799320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 4535411 - 4535519
Alignment:
Q  338 gataaaaataaaacgtattttcagt-tagatttgtttcagttt--tttaagggtttactttccactataaata-cagccttgtatcagatgataaaagtg 433  Q
    |||||||| ||||||||||||||||  |||||||||||| |||  ||||| || |||||||||||||||| ||  || ||||||||||||||| ||||||    
T  4535411 gataaaaacaaaacgtattttcagtgaagatttgtttcaattttgtttaaagggttactttccactataattataagtcttgtatcagatgat-aaagtg 4535509  T
Q  434 tgtaggaaaa 443  Q
    ||||| ||||    
T  4535510 tgtagaaaaa 4535519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 43225951 - 43226024
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata 407  Q
    ||||||||||||||||| ||||||| | | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  43225951 tgaagataaaaataaaatgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 43226024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 43228032 - 43228077
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacga 234  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  43228032 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 43228077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 443
Target Start/End: Complemental strand, 48390727 - 48390497
Alignment:
Q  213 aatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg-ggaagacactggaaatttcgtgccacgatgaagact 311  Q
    ||||||||| |  ||| ||||||||||||||| || ||||| || |||||||||||||||  | ||||| |||||||||  |||||| |||||| |  |     
T  48390727 aatctggagaaatgtgtcacgatggagaagcaacgtgccacaattgttgaagcaagattctggaggaagtcactggaaaaatcgtgctacgatggaatcg 48390628  T
Q  312 catcgcgccacgatggtcgcgctgaagataaaaata-aaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata-c 408  Q
     | || | |||||||||  || || ||  || |||| ||||||||||||||| | |||||||||||  |||| ||||||| |||||||||||||||||      
T  48390627 taacgtggcacgatggta-cgatggaggaaataatagaaacgtattttcagtgaagatttgtttcaactttt-aagggtt-actttccactataaatata 48390531  T
Q  409 agccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||| |||||||||||| ||||||||||| ||||    
T  48390530 agcctcgtatcagatgat-aaagtgtgtagaaaaa 48390497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 438
Target Start/End: Complemental strand, 10949598 - 10949540
Alignment:
Q  379 ttttaagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtag 438  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  10949598 ttttaagggtt-actttccactataaatataagccttgtatcagatgat-aaagtgtgtag 10949540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 27762355 - 27762266
Alignment:
Q  348 aaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    ||||||||||||||| | |||||||| || | ||||||||||| |||||||||||||||||  || ||||||||||||||| |||||||||||    
T  27762355 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttccactataaatattagtcttgtatcagatgat-aaagtgtgtag 27762266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 45882659 - 45882734
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 264  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  45882659 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 45882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 11079360 - 11079410
Alignment:
Q  379 ttttaagggtttactttccactataaataca-gccttgtatcagatgataaa 429  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  11079360 ttttaagggtt-actttccactataaatataagccttgtatcagatgataaa 11079410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 27101540 - 27101488
Alignment:
Q  370 gtttcagttttttaagggtttactttccactataaatacag-ccttgtatcaga 422  Q
    |||||||||||||||||| ||||||| ||||||||||| || ||||||||||||    
T  27101540 gtttcagttttttaagggattacttt-cactataaatatagaccttgtatcaga 27101488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 2836736 - 2836788
Alignment:
Q  137 ttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtaggt 189  Q
    ||||||||| |||||||| || ||| |||||| ||||||||||| ||||||||    
T  2836736 ttcaatttttgaaacccttcattttcaaaatggaaaatttcaccctcgtaggt 2836788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 38002494 - 38002570
Alignment:
Q  192 gagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaag 268  Q
    |||||||||||||||||||| ||||||||| | |||| || |||||| ||||| |  | || ||| |||||||||||    
T  38002494 gagagttaacttaaaatcagtaatctggagaaacgtgtcatgatggataagcaacatgtcatgattgttgaagcaag 38002570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 2735858 - 2736112
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2735858 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 2735957  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  2735958 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttttgggt 2736057  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2736058 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 2736112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 2740594 - 2740848
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2740594 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcttgggaagacactgga 2740693  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740694 ttttttgtgccacgatgaagcctcatcgcgtcacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 2740793  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2740794 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 2740848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 39686636 - 39686890
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39686636 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 39686735  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39686736 tttttcgtgccacgatgaagcctcaccgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 39686835  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39686836 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 39686890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 45567062 - 45567316
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45567062 tgtgagcgttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgga 45567161  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  45567162 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttagttagatttgtttcagttttataagggt 45567261  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45567262 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 45567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 17462088 - 17462343
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  17462088 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggatgaagcaagattcctggtcagacactgga 17462187  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaaggg 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  17462188 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttataaggg 17462287  T
Q  388 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17462288 tttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 17462343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 39679698 - 39679952
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39679698 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagatactgga 39679797  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
      |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39679798 tttttcgtgccacgatgaagcctcattgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 39679897  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39679898 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 39679952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 22717756 - 22717502
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||    
T  22717756 tgtgagagttaacttaaaatcagaaatctgaagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgga 22717657  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  |||||||||||||||| | ||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22717656 aaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 22717557  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22717556 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 22717502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 33674936 - 33674682
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||  ||||||    
T  33674936 tgtgagagttaacttaaaatcagaaatctagagaatcgtgccacgatggagaagtatcgcgccacgattgttgaagtaagattcctgggaagctactgga 33674837  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  |||||||||||||||| |   ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33674836 aaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgtagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 33674737  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  33674736 ttactttccactataaatacagtcttgtatcagatgataaaagtgtgtagaaaaa 33674682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 189 - 438
Target Start/End: Complemental strand, 12781751 - 12781502
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  12781751 tgtgagagttaacttaaaatcagaaatctggataatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 12781652  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||| ||||||||      |||| | ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781651 aatttcgtggcacgatgaccctgtatcgtggcacgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 12781552  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtag 438  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  12781551 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtag 12781502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 22713026 - 22712793
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  22713026 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 22712927  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22712926 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 22712848  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  22712847 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 22712793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 20050554 - 20050299
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||   |||||  ||||||    
T  20050554 tgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgtgccacgattgttgcagcaagattctgaggaagctactgga 20050455  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 387  Q
    | |||||||||||||||||| | || || |||||||||| |||||||||||||    |||||||||||||||||  ||||||||||||||||||||||||    
T  20050454 attttcgtgccacgatgaagccgcaacgtgccacgatggacgcgctgaagatacttttaaaacgtattttcagtaaagatttgtttcagttttttaaggg 20050355  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  20050354 tttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 20050299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 188 - 443
Target Start/End: Complemental strand, 20055301 - 20055042
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||   |||||  |||||    
T  20055301 gtgtgagagttaacttaaaatcagaattctggagaatcatgccacgatggagaagcatcgcaccacgattgttgaagcaagattctgaggaagctactgg 20055202  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagat---ttgtttcagtttttta 383  Q
    || |||| ||||||||||||| | ||||| ||||||||||  ||| ||||||||    |||||||||||||||||  ||||   ||||||||||||||||    
T  20055201 aattttcatgccacgatgaagccgcatcgtgccacgatggatgcgttgaagatacttttaaaacgtattttcagtaaagattaattgtttcagtttttta 20055102  T
Q  384 agggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  20055101 agggtttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 20055042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 30478666 - 30478899
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  ||||||    
T  30478666 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 30478765  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||| |||||||      |||||                ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  30478766 aatttcgtggcacgatg-----gcatcg----------------ctgaagataaaaataaaacgtgttttcagttagatttgttttagttttttaagggt 30478844  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  30478845 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 30478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 17932414 - 17932539
Alignment:
Q  318 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagccttgta 417  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17932414 gccacgatggtcgcgttgaagataaaaataaaacgtatattcagttagatttgtttcagttttttaagggtttactttccactataaatacagccttgta 17932513  T
Q  418 tcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||| ||||    
T  17932514 tcagatgataaaagtgtgtagaaaaa 17932539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 35894771 - 35894538
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| || || | |||||||||||||||||||||||||| |||||||||||||||   || ||  ||||||    
T  35894771 tgtgagagttaacttaaaatcagaattctggagaattgtactacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgga 35894672  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    | |||||||||||||||      |||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35894671 attttcgtgccacgatg-----gcatcg----------------ctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 35894593  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  35894592 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 35894538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 189 - 429
Target Start/End: Complemental strand, 27518151 - 27517931
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||   |||||  ||||||    
T  27518151 tgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgcgccacgatttttgaagcaagattctgaggaagctactgga 27518052  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||                     |||| |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||    
T  27518051 aatttcgtgccacg---------------------atggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttcagttttttaagggt 27517973  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaa 429  Q
    |||||||||||||||||||  |||||||||||| ||||||||    
T  27517972 ttactttccactataaatataagccttgtatcaaatgataaa 27517931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 17943318 - 17943429
Alignment:
Q  318 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata-cagccttgt 416  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  17943318 gccatgatggtcgtgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatataagccttgt 17943417  T
Q  417 atcagatgataa 428  Q
    ||||||||||||    
T  17943418 atcagatgataa 17943429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 17943210 - 17943291
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 270  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  17943210 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagtaagat 17943291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 37171283 - 37171029
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 286  Q
    |||||||||||||||||||| || ||||||||| | |||||||||||||||||||| || |||| ||| |||||| ||||| |||||  | ||| || ||    
T  37171283 tgtgagagttaacttaaaataaggaatctggagaaacgtgccacgatggagaagcaacgtgccatgattgttgaaacaaga-tcctgaagcaagtcattg 37171185  T
Q  287 gaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaa-gataaaaataaaacgtattttcagt-tagatttgtttcagttttttaa 384  Q
     ||| |||||||||||||| |  |  | || | ||||||||| |||||||| || | ||  ||||||||||||||||  ||||||||| || | ||||||    
T  37171184 aaaaattcgtgccacgatggaatcgtaacgtggcacgatggt-gcgctgaaggaaataacaaaaacgtattttcagtgaagatttgttcca-tattttaa 37171087  T
Q  385 gggtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||| |||||||||||||||||||  | |||||||||||||||| ||||||||||| ||||    
T  37171086 ggg-ttactttccactataaatataaaccttgtatcagatgat-aaagtgtgtagaaaaa 37171029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 38190649 - 38190766
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctg--ggaagacactg 286  Q
    |||||||||||| |||||||||| ||| ||||| | |||||||||||||||||||| || |||||||| |||||| ||||| |||||  | ||| |||||    
T  38190649 tgtgagagttaatttaaaatcaggaatatggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaaga-tcctgaagcaagtcactg 38190747  T
Q  287 gaaatttcgtgccacgatg 305  Q
    |||| ||||||||||||||    
T  38190748 gaaaattcgtgccacgatg 38190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 407
Target Start/End: Complemental strand, 45280379 - 45280306
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata 407  Q
    ||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  45280379 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 45280306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 407
Target Start/End: Complemental strand, 5377827 - 5377754
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaata 407  Q
    |||||||||||||||||| |||||| | | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  5377827 tgaagataaaaataaaacttatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 5377754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 5377948 - 5377898
Alignment:
Q  191 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaa 241  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  5377948 tgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaa 5377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 45280503 - 45280457
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 235  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  45280503 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 45280457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 17932328 - 17932373
Alignment:
Q  190 gtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 235  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  17932328 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgat 17932373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 9526117 - 9526371
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9526117 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactgga 9526216  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9526217 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 9526316  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  9526317 ttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 9526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 9521367 - 9521620
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  9521367 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 9521466  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||    | ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9521467 aatttcgtgccacgatggccccgcatcgtgccaagatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttaagggt 9521566  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9521567 ttacttt-cactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 9521620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 2232262 - 2232504
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  2232262 tgtgagagttaacttaaaatcagaaatctggagcatcatgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 2232361  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  ||||||||||||||||           || | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2232362 aaaatcgtgccacgatgaag-----------cagggtc-tcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggt 2232449  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2232450 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 2232504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 188 - 443
Target Start/End: Complemental strand, 21353858 - 21353623
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||  |||||    
T  21353858 gtgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 21353759  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaa-taaaacgtattttcagttagatttgtttcagttttttaagg 386  Q
    || |||||||||                     ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21353758 aattttcgtgcc---------------------acgatgggcgcgctgaagataaaaaataaaacgtattttcagttagatttgtttcagttttttaagg 21353680  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  21353679 gttttctttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 21353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 2393812 - 2393729
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  2393812 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttcacgccacgattgttgaagcaagattc 2393729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 2401726 - 2401643
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||||||| |||||||||||||||    
T  2401726 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttttcgccacgattgttgaagcaagattc 2401643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 2617280 - 2617363
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||| |||||||| |||||||||| ||||    
T  2617280 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagtttcgtgccacgattgttgaagcaaaattc 2617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 25133681 - 25133762
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagat 270  Q
    ||||||||||||||||||||||| ||||||||| | |||| ||||||||||||||| || |||||||| |||||||||||||    
T  25133681 tgtgagagttaacttaaaatcaggaatctggagaaacgtgtcacgatggagaagcaacgtgccacgattgttgaagcaagat 25133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 23689384 - 23689317
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgat 256  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||    
T  23689384 tgtgagagttaacttaaaatcaaaaatctagagaatcatgccacgatggagaagcatcgcgccacgat 23689317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 421
Target Start/End: Complemental strand, 13449941 - 13449856
Alignment:
Q  337 agataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggtttactttccactataaatacag-ccttgtatcag 421  Q
    |||||||||||||||||||||| | | | ||||||||||||||||||||||| | ||||| ||||||||||| || |||||||||||    
T  13449941 agataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggataacttt-cactataaatatagaccttgtatcag 13449856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 2617403 - 2617490
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttactttccactataaatacag-ccttgtatcaga 422  Q
    ||||||||||||||||||||||||| | |  |||||||||||||||||||||||| |  |||| ||||||||||| || ||||||||||||    
T  2617403 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggat--cttt-cactataaatatagaccttgtatcaga 2617490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 20291280 - 20291328
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgg 237  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||    
T  20291280 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 20291328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 25133914 - 25133965
Alignment:
Q  379 ttttaagggtttactttccactataaata-cagccttgtatcagatgataaaa 430  Q
    ||||||||||| |||||||||||||||||  || |||||||||||||||||||    
T  25133914 ttttaagggtt-actttccactataaatataagtcttgtatcagatgataaaa 25133965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 195 - 443
Target Start/End: Original strand, 1170470 - 1170718
Alignment:
Q  195 agttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttc 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||    
T  1170470 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacaatggctgaagcaagattcctgggcagacactgaaaatttc 1170569  T
Q  295 gtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactt 394  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1170570 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactt 1170669  T
Q  395 tccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    || |||||||||| |||||||||||||||||||||||||||||| ||||    
T  1170670 tctactataaatatagccttgtatcagatgataaaagtgtgtagaaaaa 1170718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 25452146 - 25452400
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||  ||||||    
T  25452146 tgtgagagttaacttaaaattagaaatatggagaatcgtgccacgatggagaagcatcgcgccacgattgatgaagcaagattcctgggaagctactgga 25452245  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||||| |   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25452246 aatttcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 25452345  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  25452346 ttactttccactataaatacagccttgtattagatgataaaagtgtgtagaaaaa 25452400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 2298528 - 2298278
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||   |||||  ||||||    
T  2298528 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgactgttgaagcaagattctgaggaagctactgga 2298429  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||  |||| ||| ||| ||| |   ||| ||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||||    
T  2298428 aaaatcgtaccatgataaagccgtgtcgtgccacgatggtcgcgctgaagata----taaaacgtattttcagttagatttgttttagttttttaagggt 2298333  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  2298332 ttactttccactataaatacagccttgtatcatatgataaaagtgtgtagaaaaa 2298278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 189 - 443
Target Start/End: Complemental strand, 35385962 - 35385729
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  35385962 tgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 35385863  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||||||||||||                     ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  35385862 aatttcgtgccacg---------------------atggtcgcgctaaagataaaaataaaaagtattttcagtttgatttgtttcagttttttaagggt 35385784  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||  |||||||||||| ||||| ||||||||||| ||||    
T  35385783 ttactttccactataaatataagccttgtatcaaatgat-aaagtgtgtagaaaaa 35385729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 22672504 - 22672739
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||||| |||||| ||||||| || |||||||||||||||   || ||  ||||||    
T  22672504 tgtgagagttaacttaaaattagaattctggagaatcgtgccacgatggaaaagcattgcgccacaattgttgaagcaagattctgagggagttactgga 22672603  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcag--ttttttaagg 386  Q
    |||||||||||                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  22672604 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaatgtattttcagttagatttgtttcagttttttttaagg 22672682  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  22672683 gtttactttccactataaatagaagccttgtatcagatgat-aaagtgtgtagaaaaa 22672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 42237954 - 42238208
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||     | || |||||||    
T  42237954 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattttgaagcagtcactgga 42238053  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  |||||||||||||||  | || || | ||||||||| |||  ||| |||||||  ||||||||||||||||  |||||||||||| |||||||| |    
T  42238054 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggt-gcgattgaggataaaacaaaaacgtattttcagtgaagatttgtttcaattttttaaag 42238152  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    | |||||||||||||||||||  | |||||||||| ||||| ||||||||||| ||||    
T  42238153 ggttactttccactataaatataaaccttgtatca-atgat-aaagtgtgtagaaaaa 42238208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 1240078 - 1240333
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  1240078 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 1240177  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 387  Q
    ||  ||||||||||||     |  |||| |||||||||||     ||||||||||||||||||||||||| | |  | |||||||||||||||||||| |    
T  1240178 aaaatcgtgccacgattggatcgaatcgtgccacgatggtgcaattgaagataaaaataaaacgtatttttattgaacatttgtttcagttttttaagag 1240277  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
     |||||||| ||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  1240278 gttactttctactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 1240333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 422
Target Start/End: Original strand, 6747044 - 6747278
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  6747044 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 6747143  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  ||||||||||||     |  |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  6747144 aaagtcgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 6747242  T
Q  387 gtttactttccactataaatacag-ccttgtatcaga 422  Q
    | ||||||| ||||||||||| || ||||||||||||    
T  6747243 gattacttt-cactataaatatagaccttgtatcaga 6747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 40222414 - 40222668
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||    | || ||| |||    
T  40222414 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattctgaagcagtcacagga 40222513  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 387  Q
    ||  |||||||||||||||  | || || | |||||||||     ||| |||||||  ||||||| ||||||||  | |||||||||| |||||||| ||    
T  40222514 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggtacgattgaggataaaataaaaacgtgttttcagtgaaaatttgtttcaattttttaaagg 40222613  T
Q  388 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
     ||||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  40222614 attacttt-cactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 40222668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 351 - 438
Target Start/End: Original strand, 25445305 - 25445392
Alignment:
Q  351 cgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagccttgtatcagatgataaaagtgtgtag 438  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25445305 cgtattttcagttagatttgtttcagttttttaagggtttaccttccactataaatacagtcttgtatcagatgataaaagtgtgtag 25445392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 188 - 422
Target Start/End: Complemental strand, 10529639 - 10529404
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| |||||||| |||||||||| ||||  | | |  ||||||    
T  10529639 gtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatcgagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgg 10529540  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaag 385  Q
    |||  |||||||||||| |   |  |||| ||||||||| | |||  ||||||||||||||||||||||||| | |  |||||| |||||||||||||||    
T  10529539 aaaaatcgtgccacgattagatcgaatcgtgccacgatgat-gcgattgaagataaaaataaaacgtatttttattgaagatttatttcagttttttaag 10529441  T
Q  386 ggtttactttccactataaatacag-ccttgtatcaga 422  Q
    || ||||||| ||||||||||| || ||||||||||||    
T  10529440 ggattacttt-cactataaatatagaccttgtatcaga 10529404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 422
Target Start/End: Original strand, 6744800 - 6745035
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| | ||| |||||||| |||||||||| ||||  | | |  ||||||    
T  6744800 gtgtgagagttaatttaaaatcagaattctggagaatcgtgccacgatggagaaacttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 6744899  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttca-gttagatttgtttcagttttttaag 385  Q
    |||  ||||||||||||     |  |||| || |||||||| |||  ||||||||||||||||||||||||| |    ||||||||||||||||||||||    
T  6744900 aaaaatcgtgccacgattggatcgaatcgtgctacgatggt-gcgattgaagataaaaataaaacgtatttttatcgaagatttgtttcagttttttaag 6744998  T
Q  386 ggtttactttccactataaatacag-ccttgtatcaga 422  Q
    || ||||||| ||||||||||| || ||||||||||||    
T  6744999 ggattacttt-cactataaatatagaccttgtatcaga 6745035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 25445219 - 25445304
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcct 274  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||| | |||||||||||||||    
T  25445219 tgtgagagttaacttaaaattagaaatctggagaatcgtaccatgatggagaagcatcgcgccacgattgatgaagcaagattcct 25445304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 422
Target Start/End: Original strand, 4409797 - 4410031
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||| ||||||||||||||||||  |||| || |||||||||||||| |||||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  4409797 tgtgaaagttaacttaaaatcagagttctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 4409896  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 386  Q
    ||  ||||||||| ||     |  |||| ||||||||||| ||| | | |||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  4409897 aaaatcgtgccacaattggatcgaatcgtgccacgatggt-gcgatggcagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 4409995  T
Q  387 gtttactttccactataaatacag-ccttgtatcaga 422  Q
    | ||||||| ||||||||||| || ||||||||||||    
T  4409996 gattacttt-cactataaatatagaccttgtatcaga 4410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 191 - 422
Target Start/End: Original strand, 39854226 - 39854458
Alignment:
Q  191 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 290  Q
    |||||||||||||||||| |||| ||||||| |||||| || ||| ||||||  ||| |||||||| |||||||||| ||||  | | |  |||||||||    
T  39854226 tgagagttaacttaaaattagaattctggagaatcgtgtcatgatagagaagtttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 39854325  T
Q  291 tttcgtgccacgatgaagactcatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagtta-gatttgtttcagttttttaagggt 388  Q
      ||||| |||| |  |  | ||||| | ||||||||| ||| | |||||||||||||||||||||||| | | | |||||||||||||||||||||||     
T  39854326 aatcgtgtcacggttgaatcgcatcgtggcacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaaggga 39854424  T
Q  389 ttactttccactataaatacag-ccttgtatcaga 422  Q
    ||||||| ||||||||||| || ||||||||||||    
T  39854425 ttacttt-cactataaatatagaccttgtatcaga 39854458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 17841816 - 17841766
Alignment:
Q  194 gagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagca 244  Q
    ||||||| |||||||||| ||||||||| | |||| |||||||||||||||    
T  17841816 gagttaatttaaaatcaggaatctggagaaacgtgtcacgatggagaagca 17841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 15976 - 16230
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||| ||    
T  15976 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagcttcctgggaagctactaga 16075  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||||||||    | ||||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  16076 aatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctgaagataaaataaaaacgtatttttagttagatttgtttcagttttttaagggt 16175  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16176 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 16230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 191 - 443
Target Start/End: Original strand, 30795 - 31048
Alignment:
Q  191 tgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaa 290  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  30795 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccaggatggttgaagcaagattcctgggaagctactggaaa 30894  T
Q  291 tttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttttaagggtt 389  Q
      ||||||||||||||||     ||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  30895 aatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgttgaagataaaaataaaatgtatttttcagttagatttgtttcagttttataagggtt 30994  T
Q  390 tactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30995 tactttccactataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 31048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 206 - 443
Target Start/End: Original strand, 224510 - 224726
Alignment:
Q  206 aatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  224510 aatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgcc------ 224603  T
Q  306 aagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaa 405  Q
                   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  224604 ---------------acgatgatcgcgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggttttctttccactataaa 224688  T
Q  406 tacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  224689 tacagccttgtatcagatgataaaagtgtgtagaaaaa 224726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 189 - 429
Target Start/End: Complemental strand, 17496 - 17276
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  17496 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatagagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 17397  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    |||||||||||                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17396 aatttcgtgcc---------------------acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 17318  T
Q  389 ttactttccactataaata-cagccttgtatcagatgataaa 429  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  17317 ttactttccactataaatataagccttgtatcagatgataaa 17276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 189 - 443
Target Start/End: Original strand, 1108 - 1341
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||    
T  1108 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcttgggaagctactgga 1207  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggt 388  Q
    ||||| |||||                     ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  1208 aattttgtgcc---------------------acgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttgagggt 1286  T
Q  389 ttactttccactataaatacagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1287 ttactttccaatataaatacagccttgtatcagatgataaaagtgtgtagaaaaa 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 188 - 443
Target Start/End: Complemental strand, 188754 - 188519
Alignment:
Q  188 gtgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    ||||   ||| |    
T  188754 gtgtgagagttaacttaaaattagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattatgaggaaactactag 188655  T
Q  288 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaagg 386  Q
    ||||||||||||||||||      |||||                |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  188654 aaatttcgtgccacgatg-----gcatcg----------------ctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 188576  T
Q  387 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtaggaaaa 443  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  188575 gtttactttccactataaatataagccttgtatcagatgat-aaagtgtgtagaaaaa 188519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 189 - 422
Target Start/End: Complemental strand, 42022 - 41788
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 288  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| |||||||| |||| ||||| | | ||||| | ||||||||    
T  42022 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaa-agttctgggcaaacactgga 41924  T
Q  289 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcag-ttttttaag 385  Q
    ||  ||||||||||||     |  |||| |||||||| || |||  ||||||||||||||||||||||||| | |  | ||||||||||| |||||||||    
T  41923 aaaatcgtgccacgattgtatcgaatcgtgccacgatagt-gcgattgaagataaaaataaaacgtatttttattgaaaatttgtttcagtttttttaag 41825  T
Q  386 ggtttactttccactataaatacag-ccttgtatcaga 422  Q
    || ||||||| ||||||||||| || ||||||||||||    
T  41824 ggattacttt-cactataaatatagaccttgtatcaga 41788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 1349 - 1266
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 272  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||| |||||||||| ||||    
T  1349 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattc 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 422
Target Start/End: Complemental strand, 1225 - 1136
Alignment:
Q  334 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttactttccactataaatacag-ccttgtatcaga 422  Q
    ||||||||||||||||||||||||| | |  |||||||||||| ||| ||||||| ||||||| ||||||||||| || ||||||||||||    
T  1225 tgaagataaaaataaaacgtatttttattgaagatttgtttcaatttgttaagggattacttt-cactataaatatagaccttgtatcaga 1136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 120569 - 120609
Alignment:
Q  189 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 229  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  120569 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 120609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0691 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 4252 - 4336
Alignment:
Q  104 tttactctattcaagcgactgaggttcagtctcttcaattttagaaaccctccaatttgaaaatgcaaaatttcaccatcgtagg 188  Q
    |||||| || |||||||||| || |||||| || ||||||||  ||| |||||| ||||||||||||||| ||| ||||| ||||    
T  4252 tttactttactcaagcgactaagattcagtgtcatcaattttttaaatcctccactttgaaaatgcaaaacttcgccatcatagg 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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