View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15485_low_4 (Length: 497)

Name: NF15485_low_4
Description: NF15485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15485_low_4
NF15485_low_4
[»] chr1 (7 HSPs)
chr1 (20-329)||(50005451-50005759)
chr1 (406-482)||(50005262-50005338)
chr1 (406-482)||(28260289-28260365)
chr1 (258-315)||(13193207-13193264)
chr1 (406-466)||(11923768-11923828)
chr1 (406-482)||(50335772-50335848)
chr1 (429-479)||(45085645-45085695)
[»] chr6 (10 HSPs)
chr6 (406-482)||(27142612-27142688)
chr6 (205-316)||(2339435-2339546)
chr6 (202-308)||(5038792-5038898)
chr6 (406-466)||(8568741-8568801)
chr6 (200-327)||(19474997-19475124)
chr6 (212-308)||(10779513-10779609)
chr6 (408-462)||(2939848-2939903)
chr6 (408-461)||(3565615-3565667)
chr6 (408-479)||(2339189-2339260)
chr6 (295-327)||(19232010-19232042)
[»] chr8 (17 HSPs)
chr8 (205-316)||(16848324-16848435)
chr8 (407-482)||(15081449-15081524)
chr8 (407-482)||(38082222-38082299)
chr8 (406-482)||(2262622-2262698)
chr8 (407-482)||(9295212-9295287)
chr8 (412-472)||(10404861-10404922)
chr8 (195-308)||(38082459-38082572)
chr8 (258-314)||(12310514-12310570)
chr8 (410-478)||(12310743-12310811)
chr8 (281-319)||(2262435-2262473)
chr8 (257-309)||(28856183-28856235)
chr8 (411-465)||(18180837-18180892)
chr8 (274-327)||(15081241-15081294)
chr8 (408-461)||(26150567-26150620)
chr8 (258-315)||(29019491-29019548)
chr8 (406-462)||(37490870-37490926)
chr8 (258-314)||(37491096-37491152)
[»] scaffold0251 (2 HSPs)
scaffold0251 (203-308)||(8494-8599)
scaffold0251 (413-476)||(8298-8361)
[»] chr4 (9 HSPs)
chr4 (193-299)||(24414331-24414437)
chr4 (411-482)||(54239489-54239560)
chr4 (406-479)||(15634539-15634614)
chr4 (213-327)||(15634318-15634431)
chr4 (411-482)||(18490390-18490461)
chr4 (218-308)||(54239216-54239306)
chr4 (408-465)||(2053162-2053219)
chr4 (411-465)||(13085246-13085301)
chr4 (426-482)||(34943586-34943642)
[»] chr3 (5 HSPs)
chr3 (192-300)||(27484707-27484815)
chr3 (200-315)||(1150799-1150914)
chr3 (407-481)||(1697138-1697211)
chr3 (429-474)||(33528308-33528353)
chr3 (408-461)||(19949880-19949933)
[»] chr5 (6 HSPs)
chr5 (408-482)||(15385090-15385164)
chr5 (408-478)||(35160867-35160936)
chr5 (426-466)||(7775315-7775355)
chr5 (217-308)||(35161117-35161208)
chr5 (406-475)||(36844473-36844542)
chr5 (194-302)||(14503723-14503831)
[»] chr7 (8 HSPs)
chr7 (195-328)||(16931136-16931269)
chr7 (195-328)||(16936519-16936652)
chr7 (408-465)||(5678366-5678423)
chr7 (408-465)||(5703418-5703475)
chr7 (218-315)||(721861-721960)
chr7 (411-482)||(22572524-22572594)
chr7 (216-303)||(22572741-22572828)
chr7 (419-465)||(13882840-13882886)
[»] chr2 (3 HSPs)
chr2 (406-482)||(5841182-5841257)
chr2 (408-465)||(18725748-18725805)
chr2 (258-315)||(5840761-5840818)


Alignment Details
Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 20 - 329
Target Start/End: Complemental strand, 50005759 - 50005451
Alignment:
Q  20 ctccaggctctgttgatcatttttacttttatgcctattagctttattgtttcattgtttgcaaagtacatctttaagatgtaaggtttcgtttatcagt 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50005759 ctccaggctctgttgatcatttt-acttttatgcctattagctttattgtttcattgtttgcaaagtacatctttaagatgtaaggtttcgtttatcagt 50005661  T
Q  120 ggaggtccaattcagaaactatagtcattggtttctaaaagagatattgtcttgcataatgtaggtacgctatagtgatctaggtaaactggcggcgcgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  50005660 ggaggtccaattcagaaactatagtcattggtttctaaaagagatattgtcttgcataatgtaggtacgctatagtgatctaggtaaactggcggcgtgt 50005561  T
Q  220 atcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttggaaagctcc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  50005560 atcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgcagatttgatatccgatgtcagattgactcgaattataccttttcggaaagctcc 50005461  T
Q  320 agacctcata 329  Q
     |||||||||    
T  50005460 tgacctcata 50005451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 50005338 - 50005262
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  50005338 cctattatttaaacagaactttcgtagcctaagagacaccttttcattcaataaaattatcgagaacttttctcaat 50005262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 28260365 - 28260289
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    ||||||||||||||  |||||||||||||||| || || |||| |||||||||||| |||| ||||||||| |||||    
T  28260365 cctagtatttaaactaaactttcgtagcctaaaaggcagttttgcattcaataaaaatatcgagaacttttttcaat 28260289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 13193264 - 13193207
Alignment:
Q  258 aatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttggaaag 315  Q
    ||||||| ||||||||||| | |||||| |||||||||||||||||||||| ||||||    
T  13193264 aatagtgcagatttgacattcaatgtcatattgactcgaattataccttttcggaaag 13193207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 11923768 - 11923828
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatc 466  Q
    |||||||||||| |  ||| |||||||||||||||||| |||| |||||||||||||||||    
T  11923768 cctagtatttaagctaaacattcgtagcctaagagacagttttccattcaataaaattatc 11923828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 482
Target Start/End: Original strand, 50335772 - 50335848
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||||| |  ||| || |||| |||||| ||| ||||||||| |||||||||||  |||||||||||||||    
T  50335772 cctagtatttaagcttaacatttgtagtctaagatacagtttttcatttaataaaattattgagaacttttctcaat 50335848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 429 - 479
Target Start/End: Original strand, 45085645 - 45085695
Alignment:
Q  429 gtagcctaagagacactttttcattcaataaaattatcaagaacttttctc 479  Q
    |||||||||||| || |||||||||||||||| ||||  ||||||||||||    
T  45085645 gtagcctaagaggcagtttttcattcaataaacttattgagaacttttctc 45085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 6e-26; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 27142688 - 27142612
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| | |||||||||||||    
T  27142688 cctagtatttaaacagaactttcgtagcctaagaggcagtttttcattcaataaaattatcgaaaacttttctcaat 27142612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 2339546 - 2339435
Alignment:
Q  205 aaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacc 304  Q
    ||||||||||||| ||| |||||||| ||||| | ||||||    ||||||||||| ||||||||||   ||||||||||||| |||| |||||||||||    
T  2339546 aaactggcggcgcatattgaagatgaagtggctcacaagaaatgctcacttgaaatggtgtagattttgtatccgatgtcagaatgacccgaattatacc 2339447  T
Q  305 tttttggaaagc 316  Q
    |||| |||||||    
T  2339446 ttttcggaaagc 2339435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 5038898 - 5038792
Alignment:
Q  202 ggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattat 301  Q
    |||||||||||||| ||| |||||||||| || || |||||||| || ||| ||| ||||||| |||||||  ||||| | ||||||||||| || ||||    
T  5038898 ggtaaactggcggcacgtgtcgaagatgaagtagcacgcaagaaagactcatttggaatagtgcagatttggtatccggtatcagattgacttgagttat 5038799  T
Q  302 acctttt 308  Q
    |||||||    
T  5038798 acctttt 5038792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 466
Target Start/End: Complemental strand, 8568801 - 8568741
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatc 466  Q
    |||||||||||| |  ||| |||||||||||||||||| |||| |||||||||||||||||    
T  8568801 cctagtatttaagctaaacattcgtagcctaagagacagttttccattcaataaaattatc 8568741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 327
Target Start/End: Complemental strand, 19475124 - 19474997
Alignment:
Q  200 taggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaatt 299  Q
    |||| |||||||||| |  |||||||||||| | || |||||| || |  |||||   ||||||| ||||||| |||||| |||| || |||||||||||    
T  19475124 taggcaaactggcggtggatatcgaagatgaagcggagcgcaaaaaaggttcactcagaatagtgcagatttggcatccggtgtcggaatgactcgaatt 19475025  T
Q  300 atacctttttggaaagctccagacctca 327  Q
    |||| |||||||||| | || |||||||    
T  19475024 atacatttttggaaatccccggacctca 19474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 10779513 - 10779609
Alignment:
Q  212 cggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacctttt 308  Q
    |||||||||| |||||||| |||||||||||||| |  |||||| |||| ||| ||||||  |||| | ||||||| ||||  ||||||| ||||||    
T  10779513 cggcgcgtattgaagatgaagtggcgcgcaagaaaggttcacttaaaatggtgcagattttgcatctggtgtcagaatgacctgaattattcctttt 10779609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 2939903 - 2939848
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagag-acactttttcattcaataaaat 462  Q
    |||||||||| ||||||||  | |||||||||| ||||||||||||||||||||||    
T  2939903 tagtatttaagcagaacttatgcagcctaagaggacactttttcattcaataaaat 2939848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 3565615 - 3565667
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaa 461  Q
    |||||||||||||||||||  |||||| ||||| ||| ||||||||||||||||    
T  3565615 tagtatttaaacagaacttatgtagccaaagaggcac-ttttcattcaataaaa 3565667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 2339260 - 2339189
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagaca-ctttttcattcaataaaattatcaagaacttttctc 479  Q
    ||||||||| | |||||||  | |||||||||| || ||||||||||||||||||||||| || |||||||||    
T  2339260 tagtatttatagagaacttatgcagcctaagaggcatctttttcattcaataaaattatcgag-acttttctc 2339189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 19232010 - 19232042
Alignment:
Q  295 gaattatacctttttggaaagctccagacctca 327  Q
    |||||||||||||||||||||| ||||||||||    
T  19232010 gaattatacctttttggaaagccccagacctca 19232042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 16848324 - 16848435
Alignment:
Q  205 aaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacc 304  Q
    |||||||||||||||||||||||||| |||||||  ||||| || ||||||  ||||||| ||||||||||||||||||| |||||||  |||||||||     
T  16848324 aaactggcggcgcgtatcgaagatgaagtggcgcataagaaagactcacttagaatagtgcagatttgacatccgatgtcggattgacctgaattataca 16848423  T
Q  305 tttttggaaagc 316  Q
    |||| |||||||    
T  16848424 ttttcggaaagc 16848435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 407 - 482
Target Start/End: Original strand, 15081449 - 15081524
Alignment:
Q  407 ctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||||||| |||||||||||||||    
T  15081449 ctagtatttaaacaaaactttcgtagtctaagaggcagtttttccttcaataaaattatcgagaacttttctcaat 15081524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 407 - 482
Target Start/End: Complemental strand, 38082299 - 38082222
Alignment:
Q  407 ctagtatttaaacagaactttcgtagcctaagagacac-tttttcattcaat-aaaattatcaagaacttttctcaat 482  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||    
T  38082299 ctagtatttaaacataactttcgtagcctaagaggcacttttttcattcaataaaaattatcgagaacttttctcaat 38082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 482
Target Start/End: Original strand, 2262622 - 2262698
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    ||||||||||||||| ||||||||||| ||||||  || |||||||||||||||||| ||  |||||||||||||||    
T  2262622 cctagtatttaaacataactttcgtagtctaagatgcagtttttcattcaataaaatcatggagaacttttctcaat 2262698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 482
Target Start/End: Original strand, 9295212 - 9295287
Alignment:
Q  407 ctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||||||  |||||| ||||  | ||||||| |||| ||||||||||||||||| |||||||||||||||    
T  9295212 ctagtatttaaactaaacttttgtagtttcagagacagttttacattcaataaaattatcgagaacttttctcaat 9295287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 10404861 - 10404922
Alignment:
Q  412 atttaaacagaactttcgtagcctaagagacac-tttttcattcaataaaattatcaagaac 472  Q
    |||||| |||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  10404861 atttaaccagagctttcgtagcctaagaggcacttttttcattcaataaaattatcgagaac 10404922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 38082572 - 38082459
Alignment:
Q  195 tgatctaggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactc 294  Q
    |||| ||| ||||||||| | | ||||||||||||| ||| |||||||||| || || ||   ||||||| ||||||| |||||| |||| || ||||||    
T  38082572 tgatatagataaactggcagtgtgtatcgaagatgaagtgacgcgcaagaaagactcgctcagaatagtgcagatttggcatccggtgtcggaatgactc 38082473  T
Q  295 gaattatacctttt 308  Q
    ||||||||| ||||    
T  38082472 gaattatacatttt 38082459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 12310514 - 12310570
Alignment:
Q  258 aatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttggaaa 314  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||||||| ||||||||||    
T  12310514 aatagtgcagatttggcatccgatgtcggattgactcaaattatacttttttggaaa 12310570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 12310743 - 12310811
Alignment:
Q  410 gtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttct 478  Q
    ||||||||||  ||||||||||||||||||| ||  |||||||||||||||| |||| | |||||||||    
T  12310743 gtatttaaactaaactttcgtagcctaagaggcaacttttcattcaataaaaatatcgataacttttct 12310811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 2262435 - 2262473
Alignment:
Q  281 tgtcagattgactcgaattatacctttttggaaagctcc 319  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  2262435 tgtcggattgactcgaattatacctttttggaaagctcc 2262473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 28856235 - 28856183
Alignment:
Q  257 aaatagtgtagatttgacatccgatgtcagattgactcgaattataccttttt 309  Q
    ||||| || ||||||||||||||  || |||||||||||||||||||||||||    
T  28856235 aaatattgcagatttgacatccgtcgttagattgactcgaattataccttttt 28856183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 18180892 - 18180837
Alignment:
Q  411 tatttaaacagaactttc-gtagcctaagagacactttttcattcaataaaattat 465  Q
    |||||||||||||| ||  |||||||||||| |||||||| |||||||||||||||    
T  18180892 tatttaaacagaacattatgtagcctaagaggcactttttgattcaataaaattat 18180837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 15081241 - 15081294
Alignment:
Q  274 catccgatgtcagattgactcgaattatacctttttggaaagctccagacctca 327  Q
    |||||| |||| ||||||||||||||||||||||| | ||||||| ||| ||||    
T  15081241 catccggtgtcggattgactcgaattataccttttcgaaaagctctagagctca 15081294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 26150567 - 26150620
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaa 461  Q
    ||||||||||||| |||||  | ||| |||||| ||||||||||||||||||||    
T  26150567 tagtatttaaacaaaacttatgcagcttaagaggcactttttcattcaataaaa 26150620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 29019548 - 29019491
Alignment:
Q  258 aatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttggaaag 315  Q
    ||||||| |||||||||||| | |||| || ||||| ||| |||||||||||||||||    
T  29019548 aatagtgcagatttgacatctgttgtccgaatgacttgaaatatacctttttggaaag 29019491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 37490926 - 37490870
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaat 462  Q
    ||||||||| ||||  |||||||||| |||||||  || ||||||||||||||||||    
T  37490926 cctagtattcaaactaaactttcgtaacctaagatgcattttttcattcaataaaat 37490870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 37491152 - 37491096
Alignment:
Q  258 aatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttggaaa 314  Q
    ||||||||| ||||  |||||||| || |||| |||||||||||||||||| |||||    
T  37491152 aatagtgtatatttcgcatccgatatcggattaactcgaattataccttttcggaaa 37491096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 8599 - 8494
Alignment:
Q  203 gtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattata 302  Q
    |||||||||||||||||||||||||||| ||| |  | ||||| || ||||||  ||||||| ||||||||||| || ||| ||||||||||||||||||    
T  8599 gtaaactggcggcgcgtatcgaagatgaagtgacatgtaagaaagactcacttagaatagtgcagatttgacattcggtgttagattgactcgaattata 8500  T
Q  303 cctttt 308  Q
    ||||||    
T  8499 cctttt 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 413 - 476
Target Start/End: Complemental strand, 8361 - 8298
Alignment:
Q  413 tttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaactttt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||    
T  8361 tttaaacagaactttcgtagcctaagagacactttttcattcaatcaaattttcgagatctttt 8298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 24414437 - 24414331
Alignment:
Q  193 agtgatctaggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgac 292  Q
    |||||| |||||||| ||| || |||||| |||||||| ||||||||||||||    ||||||| |||||||||||||||| ||| |||||| |||||||    
T  24414437 agtgatgtaggtaaattggtggtgcgtatagaagatgaagtggcgcgcaagaaatgctcacttggaatagtgtagatttgatatctgatgtcggattgac 24414338  T
Q  293 tcgaatt 299  Q
    |||||||    
T  24414337 tcgaatt 24414331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 54239489 - 54239560
Alignment:
Q  411 tatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||| |||||| ||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||    
T  54239489 tatttaaacaaaactttggtagcctaagatacagtttttcaatcaataaaattatcgagaacttttctcaat 54239560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 479
Target Start/End: Original strand, 15634539 - 15634614
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacac--tttttcattcaataaaattatcaagaacttttctc 479  Q
    ||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||| ||| |||| |||||||    
T  15634539 cctagtatttaaacataactttcgtagtctaagagacactttttttcattcaataaaataatcgagaaattttctc 15634614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 327
Target Start/End: Original strand, 15634318 - 15634431
Alignment:
Q  213 ggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttgga 312  Q
    |||| ||||||||| ||| ||||||| |||||| |  ||  |||||||| ||||||||||||||| | |||| ||||||||| ||||||| ||||| |||    
T  15634318 ggcgagtatcgaagttgaagtggcgcacaagaaagc-tcgtttgaaatattgtagatttgacatctggtgtcggattgactcaaattatatcttttcgga 15634416  T
Q  313 aagctccagacctca 327  Q
    ||||| |||||||||    
T  15634417 aagctacagacctca 15634431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 18490390 - 18490461
Alignment:
Q  411 tatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||  ||| || |||| |||||||| | |||||||||||||||||||||| |||||||||||||||    
T  18490390 tatttaaactaaacattggtagtctaagagatagtttttcattcaataaaattatcgagaacttttctcaat 18490461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 54239216 - 54239306
Alignment:
Q  218 gtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacctttt 308  Q
    ||||||||||||| ||| ||||||||||    ||| |  |||||||||||||||||||| ||| ||| ||||||||| |||||||| ||||    
T  54239216 gtatcgaagatgaagtgacgcgcaagaaatgctcaatgaaaatagtgtagatttgacattcgaagtcggattgactcaaattatacatttt 54239306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 2053219 - 2053162
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattat 465  Q
    ||||||||||||| |||||  | ||||||||||| |||| ||||||||||||||||||    
T  2053219 tagtatttaaacataacttatgcagcctaagagagacttattcattcaataaaattat 2053162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 13085301 - 13085246
Alignment:
Q  411 tatttaaacagaactttc-gtagcctaagagacactttttcattcaataaaattat 465  Q
    |||||||||||||| ||  | ||||||||||||||||||| |||||||||||||||    
T  13085301 tatttaaacagaacattatgcagcctaagagacacttttttattcaataaaattat 13085246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 482
Target Start/End: Complemental strand, 34943642 - 34943586
Alignment:
Q  426 ttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||||||||| | ||||| |||||||||||||||  ||||| ||| |||||    
T  34943642 ttcgtagcctaagagaaaattttttattcaataaaattatagagaacatttatcaat 34943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 8e-19; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 27484815 - 27484707
Alignment:
Q  192 tagtgatctaggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattga 291  Q
    ||||||| |||| ||||||| ||| | |||||||||| | ||||||| |||||| |  | |||||||||||||||||||||||||| | |||||||| ||    
T  27484815 tagtgatttaggcaaactggtggcacatatcgaagataaagtggcgcacaagaaaggttaacttgaaatagtgtagatttgacatctggtgtcagatcga 27484716  T
Q  292 ctcgaatta 300  Q
    |||||||||    
T  27484715 ctcgaatta 27484707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 1150799 - 1150914
Alignment:
Q  200 taggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaatt 299  Q
    |||| ||||| || ||| |||| |||||||| |||||||||||||| || ||  | | ||||||| |||||||||||||||| || |||||| ||||||     
T  1150799 taggcaaactagctgcgtgtattgaagatgaagtggcgcgcaagaaagattcgatgggaatagtgcagatttgacatccgatatccgattgattcgaatg 1150898  T
Q  300 atacctttttggaaag 315  Q
    ||||||||| ||||||    
T  1150899 ataccttttcggaaag 1150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 1697211 - 1697138
Alignment:
Q  407 ctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaa 481  Q
    ||||||||||||||||||||  | | | ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  1697211 ctagtatttaaacagaacttatgcaacttaagagatactttttcattcaataaaattatcaag-acttttctcaa 1697138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 429 - 474
Target Start/End: Complemental strand, 33528353 - 33528308
Alignment:
Q  429 gtagcctaagagacactttttcattcaataaaattatcaagaactt 474  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||    
T  33528353 gtaggctaagagacactttttcattcaataaaattatagagaactt 33528308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 19949880 - 19949933
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaa 461  Q
    |||||||||||||||||||  | |||||||||| |||||| ||||| |||||||    
T  19949880 tagtatttaaacagaacttatgcagcctaagagtcactttatcattgaataaaa 19949933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 482
Target Start/End: Complemental strand, 15385164 - 15385090
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    ||||||||||| ||||||||||| ||| |  ||||| |||||||||||||||||||||| |||||||||||||||    
T  15385164 tagtatttaaatagaactttcgtggcccataagacattttttcattcaataaaattatcgagaacttttctcaat 15385090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 478
Target Start/End: Complemental strand, 35160936 - 35160867
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttct 478  Q
    |||||||||||||||||||| |||| ||||||| | | ||||||||||||||||||||| |||||||||||    
T  35160936 tagtatttaaacagaactttggtagtctaagaggc-cgttttcattcaataaaattatcgagaacttttct 35160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 7775315 - 7775355
Alignment:
Q  426 ttcgtagcctaagagacactttttcattcaataaaattatc 466  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  7775315 ttcgtagcctaagagacatttttccattcaataaaattatc 7775355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 35161208 - 35161117
Alignment:
Q  217 cgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatacctttt 308  Q
    |||||||||||||| ||| ||  ||||||    ||| ||| |||||||||||||||||||||| |||  | |||| ||||||||||||||||    
T  35161208 cgtatcgaagatgaagtgacgtacaagaaatgttcatttggaatagtgtagatttgacatccgttgttgggttgattcgaattatacctttt 35161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 475
Target Start/End: Complemental strand, 36844542 - 36844473
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttt 475  Q
    ||||||||||||||  ||||||||| | |||||||    ||||||||| |||||||||||| ||||||||    
T  36844542 cctagtatttaaactaaactttcgtcgtctaagaggttgtttttcatttaataaaattatcgagaacttt 36844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 14503723 - 14503831
Alignment:
Q  194 gtgatctaggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgact 293  Q
    ||||| |||| ||| |||| || | ||| |||||| | |||||||||||||| |  ||| |  |||||||| |||||| ||||| | |||||||||||||    
T  14503723 gtgatgtaggcaaagtggctgcacttattgaagataaagtggcgcgcaagaaaggttcaataaaaatagtgcagatttaacatctggtgtcagattgact 14503822  T
Q  294 cgaattata 302  Q
    | |||||||    
T  14503823 caaattata 14503831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 16931136 - 16931269
Alignment:
Q  195 tgatctaggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagattt-gacatccgatgtcagattgact 293  Q
    |||| |||| ||| |||||||||||||||||||| | |||||  |||||||    ||||||| ||||||| |||||| | |||||| |||| ||||| ||    
T  16931136 tgatgtaggcaaattggcggcgcgtatcgaagattaagtggcatgcaagaaatgctcacttggaatagtgcagattttggcatccggtgtcggattggct 16931235  T
Q  294 cgaattatacctttttggaaagctccagacctcat 328  Q
    ||||||||| ||||||| ||||| |||||||||||    
T  16931236 cgaattataactttttgaaaagc-ccagacctcat 16931269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 16936519 - 16936652
Alignment:
Q  195 tgatctaggtaaactggcggcgcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagattt-gacatccgatgtcagattgact 293  Q
    |||| |||| ||| |||||||||||||||||||| | |||||  |||||||    ||||||| ||||||| |||||| | |||||| |||| ||||| ||    
T  16936519 tgatgtaggcaaattggcggcgcgtatcgaagattaagtggcatgcaagaaatgctcacttggaatagtgcagattttggcatccggtgtcggattggct 16936618  T
Q  294 cgaattatacctttttggaaagctccagacctcat 328  Q
    ||||||||| ||||||| ||||| |||||||||||    
T  16936619 cgaattataactttttgaaaagc-ccagacctcat 16936652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 5678423 - 5678366
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattat 465  Q
    |||||||||||||||||||  | ||| |||||||||||||||||||||||||||||||    
T  5678423 tagtatttaaacagaacttatgcagcttaagagacactttttcattcaataaaattat 5678366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 5703475 - 5703418
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattat 465  Q
    |||||||||||||||||||  | ||| |||||||||||||||||||||||||||||||    
T  5703475 tagtatttaaacagaacttatgcagcttaagagacactttttcattcaataaaattat 5703418  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 721960 - 721861
Alignment:
Q  218 gtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaat--tatacctttttggaaag 315  Q
    ||||||||||||| ||||| | |||||| || ||| |   ||||||||||||||| |||||| |||| ||||||||| |||  |||||||||||||||||    
T  721960 gtatcgaagatgaagtggcacacaagaaagactcaatgtgaatagtgtagatttgccatccggtgtcggattgactcaaattatatacctttttggaaag 721861  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 482
Target Start/End: Complemental strand, 22572594 - 22572524
Alignment:
Q  411 tatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||| |||||||| |||| ||||||| ||||||| || | |||||||| ||| |||||||||||||||    
T  22572594 tatttaaatagaactttggtagtctaagaggcactttt-caataaataaaataatcgagaacttttctcaat 22572524  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 303
Target Start/End: Complemental strand, 22572828 - 22572741
Alignment:
Q  216 gcgtatcgaagatgacgtggcgcgcaagaatgaatcacttgaaatagtgtagatttgacatccgatgtcagattgactcgaattatac 303  Q
    ||||||| ||| ||| |||||||| ||||| || ||||||| ||||| | | ||||| |||||||||||  | |||||||||||||||    
T  22572828 gcgtatcaaaggtgaagtggcgcgtaagaaagactcacttggaatagcgcaaatttggcatccgatgtcgaaatgactcgaattatac 22572741  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 465
Target Start/End: Complemental strand, 13882886 - 13882840
Alignment:
Q  419 cagaactttcgtagcctaagagacactttttcattcaataaaattat 465  Q
    ||||||||  ||| ||||||||||||||||| |||||||||||||||    
T  13882886 cagaacttatgtatcctaagagacactttttgattcaataaaattat 13882840  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 482
Target Start/End: Original strand, 5841182 - 5841257
Alignment:
Q  406 cctagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattatcaagaacttttctcaat 482  Q
    |||||||||| |||  ||| || ||||||||||||||  |||| ||||||||||||||||| |||||||||||||||    
T  5841182 cctagtattttaactaaacatttgtagcctaagagactatttt-cattcaataaaattatcgagaacttttctcaat 5841257  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 18725805 - 18725748
Alignment:
Q  408 tagtatttaaacagaactttcgtagcctaagagacactttttcattcaataaaattat 465  Q
    ||||||||||||| |||||  |  | ||||||||||||||||||||||||||||||||    
T  18725805 tagtatttaaacaaaacttatgcggtctaagagacactttttcattcaataaaattat 18725748  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 5840761 - 5840818
Alignment:
Q  258 aatagtgtagatttgacatccgatgtcagattgactcgaattatacctttttggaaag 315  Q
    ||||||| ||||||| || ||| |||| |||||||||||||||||| |||| ||||||    
T  5840761 aatagtgcagatttggcaaccggtgtcggattgactcgaattatacattttcggaaag 5840818  T

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