View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15486_high_6 (Length: 235)

Name: NF15486_high_6
Description: NF15486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15486_high_6
NF15486_high_6
[»] chr1 (31 HSPs)
chr1 (8-60)||(28128964-28129016)
chr1 (8-60)||(28164824-28164876)
chr1 (190-222)||(28359674-28359706)
chr1 (190-222)||(45467086-45467118)
chr1 (191-222)||(8012480-8012511)
chr1 (191-222)||(29672521-29672552)
chr1 (192-222)||(14149235-14149265)
chr1 (93-153)||(28128834-28128891)
chr1 (192-222)||(44789487-44789517)
chr1 (190-222)||(2994354-2994386)
chr1 (190-222)||(6920762-6920794)
chr1 (190-222)||(15824146-15824178)
chr1 (190-222)||(18127554-18127586)
chr1 (190-222)||(22172461-22172493)
chr1 (190-222)||(23625062-23625094)
chr1 (190-222)||(23827538-23827570)
chr1 (190-222)||(26333314-26333346)
chr1 (190-222)||(26541052-26541084)
chr1 (8-40)||(28129020-28129052)
chr1 (8-40)||(28129056-28129088)
chr1 (190-222)||(28646368-28646400)
chr1 (190-222)||(29361274-29361306)
chr1 (190-222)||(30679492-30679524)
chr1 (190-222)||(31045373-31045405)
chr1 (190-222)||(34347490-34347522)
chr1 (190-222)||(38239083-38239115)
chr1 (190-222)||(40052177-40052209)
chr1 (190-222)||(42709894-42709926)
chr1 (190-222)||(42728436-42728468)
chr1 (190-222)||(44343674-44343706)
chr1 (190-222)||(51560965-51560997)
[»] chr6 (21 HSPs)
chr6 (6-47)||(27334431-27334472)
chr6 (6-47)||(27395171-27395212)
chr6 (190-222)||(26409266-26409298)
chr6 (16-52)||(27532463-27532499)
chr6 (188-222)||(1779041-1779075)
chr6 (193-222)||(1352690-1352719)
chr6 (61-170)||(27678348-27678464)
chr6 (190-222)||(200259-200291)
chr6 (190-222)||(3787311-3787343)
chr6 (190-222)||(8493428-8493460)
chr6 (190-222)||(9660256-9660288)
chr6 (190-222)||(11173104-11173136)
chr6 (190-222)||(11173451-11173483)
chr6 (190-222)||(13631093-13631125)
chr6 (190-222)||(17941826-17941858)
chr6 (190-222)||(21858745-21858777)
chr6 (190-222)||(25526683-25526715)
chr6 (190-222)||(30510785-30510817)
chr6 (190-222)||(30739182-30739214)
chr6 (190-222)||(31004123-31004155)
chr6 (190-222)||(35039865-35039897)
[»] scaffold0330 (1 HSPs)
scaffold0330 (190-222)||(13732-13764)
[»] chr8 (29 HSPs)
chr8 (190-222)||(1042587-1042619)
chr8 (190-222)||(26747047-26747079)
chr8 (190-222)||(37954508-37954540)
chr8 (190-222)||(37964867-37964899)
chr8 (192-222)||(23606402-23606432)
chr8 (190-222)||(5449332-5449364)
chr8 (190-222)||(5831161-5831193)
chr8 (190-222)||(6247834-6247866)
chr8 (190-222)||(6878731-6878763)
chr8 (190-222)||(7427200-7427232)
chr8 (190-222)||(11714657-11714689)
chr8 (190-222)||(16999410-16999442)
chr8 (190-222)||(18203049-18203081)
chr8 (190-222)||(19715446-19715478)
chr8 (190-222)||(22453345-22453377)
chr8 (190-222)||(24422342-24422374)
chr8 (190-222)||(24613063-24613095)
chr8 (190-222)||(25838503-25838535)
chr8 (190-222)||(28074303-28074335)
chr8 (190-222)||(29938509-29938541)
chr8 (190-222)||(29949317-29949349)
chr8 (190-222)||(30087758-30087790)
chr8 (190-222)||(32395067-32395099)
chr8 (190-222)||(34356733-34356765)
chr8 (190-222)||(34908900-34908932)
chr8 (190-222)||(35631246-35631278)
chr8 (190-222)||(39168820-39168852)
chr8 (190-222)||(39645741-39645773)
chr8 (190-222)||(42946451-42946483)
[»] chr5 (31 HSPs)
chr5 (190-222)||(4456612-4456644)
chr5 (190-222)||(4889978-4890010)
chr5 (190-222)||(8542979-8543011)
chr5 (190-222)||(43359871-43359903)
chr5 (192-222)||(39729593-39729623)
chr5 (190-222)||(938015-938047)
chr5 (190-222)||(3098229-3098261)
chr5 (190-222)||(4047633-4047665)
chr5 (190-222)||(5377996-5378028)
chr5 (190-222)||(7414834-7414866)
chr5 (190-222)||(8042391-8042423)
chr5 (190-222)||(8050607-8050639)
chr5 (190-222)||(8225832-8225864)
chr5 (190-222)||(9461577-9461609)
chr5 (190-222)||(11313164-11313196)
chr5 (190-222)||(12361006-12361038)
chr5 (190-222)||(12504062-12504094)
chr5 (190-222)||(12659224-12659256)
chr5 (190-222)||(22801718-22801750)
chr5 (190-222)||(27187243-27187275)
chr5 (190-222)||(28377854-28377886)
chr5 (190-222)||(29000746-29000778)
chr5 (194-222)||(29619252-29619280)
chr5 (190-222)||(29816423-29816455)
chr5 (190-222)||(34163342-34163374)
chr5 (190-222)||(34606826-34606858)
chr5 (190-222)||(35189394-35189426)
chr5 (190-222)||(36302289-36302321)
chr5 (190-222)||(36347237-36347269)
chr5 (190-222)||(37410852-37410884)
chr5 (190-222)||(42940985-42941017)
[»] chr4 (34 HSPs)
chr4 (190-222)||(17609008-17609040)
chr4 (190-222)||(34498291-34498323)
chr4 (190-222)||(35836271-35836303)
chr4 (191-222)||(32859812-32859843)
chr4 (188-222)||(42507564-42507598)
chr4 (190-222)||(4293959-4293991)
chr4 (190-222)||(11248778-11248810)
chr4 (190-222)||(18052935-18052967)
chr4 (190-222)||(20180586-20180618)
chr4 (190-222)||(20540283-20540315)
chr4 (190-222)||(21634787-21634819)
chr4 (190-222)||(23137904-23137936)
chr4 (190-222)||(23511125-23511157)
chr4 (190-222)||(25771008-25771040)
chr4 (190-222)||(26799563-26799595)
chr4 (190-222)||(26882942-26882974)
chr4 (190-222)||(29290141-29290173)
chr4 (190-222)||(29494793-29494825)
chr4 (190-222)||(29832573-29832605)
chr4 (190-222)||(31487072-31487104)
chr4 (190-222)||(33501557-33501589)
chr4 (190-222)||(36937417-36937449)
chr4 (190-222)||(37730784-37730816)
chr4 (190-222)||(38793851-38793883)
chr4 (190-222)||(41987993-41988025)
chr4 (190-222)||(42168496-42168528)
chr4 (190-222)||(42629612-42629644)
chr4 (190-222)||(45250289-45250321)
chr4 (190-222)||(48380792-48380824)
chr4 (190-222)||(50534283-50534315)
chr4 (190-222)||(51234742-51234774)
chr4 (190-222)||(51625056-51625088)
chr4 (190-222)||(56038446-56038478)
chr4 (190-222)||(56299904-56299936)
[»] chr3 (43 HSPs)
chr3 (190-222)||(23782284-23782316)
chr3 (190-222)||(29227201-29227233)
chr3 (190-222)||(36669367-36669399)
chr3 (191-222)||(52679619-52679650)
chr3 (188-222)||(3835434-3835468)
chr3 (192-222)||(54103792-54103822)
chr3 (190-222)||(2510056-2510088)
chr3 (190-222)||(3671411-3671443)
chr3 (190-222)||(4392358-4392390)
chr3 (190-222)||(8096644-8096676)
chr3 (190-222)||(8108654-8108686)
chr3 (190-222)||(15019997-15020029)
chr3 (190-222)||(17378390-17378422)
chr3 (190-222)||(19960856-19960888)
chr3 (190-222)||(21216697-21216729)
chr3 (190-222)||(23609264-23609296)
chr3 (190-222)||(23782406-23782438)
chr3 (190-222)||(24089547-24089579)
chr3 (190-222)||(27942063-27942095)
chr3 (190-222)||(28686193-28686225)
chr3 (190-222)||(30190542-30190574)
chr3 (190-222)||(31787014-31787046)
chr3 (190-222)||(33192994-33193026)
chr3 (190-222)||(33839829-33839861)
chr3 (190-222)||(35084368-35084400)
chr3 (190-222)||(35847032-35847064)
chr3 (190-222)||(38096248-38096280)
chr3 (190-222)||(38483363-38483395)
chr3 (190-222)||(38999663-38999695)
chr3 (190-222)||(42490515-42490547)
chr3 (190-222)||(43175953-43175985)
chr3 (190-222)||(45674150-45674182)
chr3 (190-222)||(45823917-45823949)
chr3 (190-222)||(46336909-46336941)
chr3 (190-222)||(47054215-47054247)
chr3 (190-222)||(47142420-47142452)
chr3 (190-222)||(47241381-47241413)
chr3 (190-222)||(48333927-48333959)
chr3 (190-222)||(49818497-49818529)
chr3 (190-222)||(51166313-51166345)
chr3 (190-222)||(52060302-52060334)
chr3 (190-222)||(53654997-53655029)
chr3 (190-222)||(54240856-54240888)
[»] chr2 (28 HSPs)
chr2 (190-222)||(2893777-2893809)
chr2 (190-222)||(19003124-19003156)
chr2 (190-222)||(29843692-29843724)
chr2 (190-222)||(40172101-40172133)
chr2 (192-222)||(3628418-3628448)
chr2 (192-222)||(28206440-28206470)
chr2 (190-222)||(325162-325194)
chr2 (190-222)||(3376463-3376495)
chr2 (190-222)||(9047269-9047301)
chr2 (190-222)||(12467848-12467880)
chr2 (190-222)||(14527968-14528000)
chr2 (190-222)||(14885237-14885269)
chr2 (190-222)||(14943294-14943326)
chr2 (190-222)||(19166212-19166244)
chr2 (190-222)||(19576265-19576297)
chr2 (190-222)||(22061198-22061230)
chr2 (190-222)||(24000155-24000187)
chr2 (190-222)||(26849853-26849885)
chr2 (190-222)||(28330963-28330995)
chr2 (190-222)||(28786754-28786786)
chr2 (190-222)||(30803647-30803679)
chr2 (190-222)||(34213335-34213367)
chr2 (190-222)||(36068323-36068355)
chr2 (190-222)||(36602058-36602090)
chr2 (190-222)||(38448331-38448363)
chr2 (190-222)||(41096144-41096176)
chr2 (190-222)||(41187000-41187032)
chr2 (190-222)||(42056255-42056287)
[»] chr7 (28 HSPs)
chr7 (192-222)||(28472101-28472131)
chr7 (188-222)||(29985798-29985832)
chr7 (190-222)||(1643536-1643568)
chr7 (190-222)||(2887472-2887504)
chr7 (190-222)||(3225654-3225686)
chr7 (190-222)||(4513390-4513422)
chr7 (190-222)||(5528603-5528635)
chr7 (190-222)||(5680243-5680275)
chr7 (190-222)||(5705295-5705327)
chr7 (190-222)||(10439231-10439263)
chr7 (190-222)||(10452941-10452973)
chr7 (190-222)||(13446186-13446218)
chr7 (190-222)||(19785609-19785641)
chr7 (190-222)||(22706794-22706826)
chr7 (190-222)||(23059290-23059322)
chr7 (190-222)||(24923406-24923438)
chr7 (190-222)||(29155524-29155556)
chr7 (190-222)||(35542179-35542211)
chr7 (190-222)||(37115951-37115983)
chr7 (190-222)||(39199265-39199297)
chr7 (190-222)||(41821019-41821051)
chr7 (190-222)||(42122121-42122153)
chr7 (190-222)||(43468304-43468336)
chr7 (190-222)||(44187101-44187133)
chr7 (190-222)||(44481205-44481237)
chr7 (190-222)||(45780692-45780724)
chr7 (190-222)||(46373033-46373065)
chr7 (190-222)||(47578710-47578742)
[»] scaffold1515 (1 HSPs)
scaffold1515 (190-222)||(1664-1696)
[»] scaffold1335 (1 HSPs)
scaffold1335 (190-222)||(1199-1231)
[»] scaffold0654 (1 HSPs)
scaffold0654 (190-222)||(2859-2891)
[»] scaffold0496 (1 HSPs)
scaffold0496 (190-222)||(12670-12702)
[»] scaffold0154 (1 HSPs)
scaffold0154 (190-222)||(4010-4042)
[»] scaffold0037 (1 HSPs)
scaffold0037 (190-222)||(99081-99113)


Alignment Details
Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 28129016 - 28128964
Alignment:
Q  8 attggtccacacggaagatgagaaggaagtttcagacttggtggttaaagtgt 60  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  28129016 attggtccacacggaagatgagaaggaagtttcagtcttggtagtaaaagtgt 28128964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 28164876 - 28164824
Alignment:
Q  8 attggtccacacggaagatgagaaggaagtttcagacttggtggttaaagtgt 60  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  28164876 attggtccacacggaagatgagaaggaagtttcagtcttggtagtaaaagtgt 28164824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 28359674 - 28359706
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  28359674 ggcatttcacatatattaagaaatgtaattaat 28359706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 45467086 - 45467118
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  45467086 ggcatttcacatatattaagaaatgtaattaat 45467118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 8012480 - 8012511
Alignment:
Q  191 gcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||||||||||    
T  8012480 gcatttcacatatattaagaaatgtaattaat 8012511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 29672552 - 29672521
Alignment:
Q  191 gcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||||||||||    
T  29672552 gcatttcacatatattaagaaatgtaattaat 29672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 14149235 - 14149265
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  14149235 catttcacatatattaagaaatgtaattaat 14149265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 28128891 - 28128834
Alignment:
Q  93 ttaactaactaactatctaggttaaaatgaaaatattatcagaactttttgatatatgcat 153  Q
    ||||||||||||||| |||| |||||||| |||   ||||||||||| |||||||||||||    
T  28128891 ttaactaactaactaactagtttaaaatggaaa---tatcagaacttgttgatatatgcat 28128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 44789517 - 44789487
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  44789517 catttcacatatattaagaaatgtaattaat 44789487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 2994386 - 2994354
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  2994386 ggcatttcacacatattaagaaatgtaattaat 2994354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 6920762 - 6920794
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  6920762 ggcatttcacacatattaagaaatgtaattaat 6920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 15824146 - 15824178
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  15824146 ggcatttcacacatattaagaaatgtaattaat 15824178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 18127586 - 18127554
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  18127586 ggcatttcacacatattaagaaatgtaattaat 18127554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 22172461 - 22172493
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  22172461 ggcatttcacacatattaagaaatgtaattaat 22172493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 23625094 - 23625062
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23625094 ggcatttcacacatattaagaaatgtaattaat 23625062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 23827570 - 23827538
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23827570 ggcatttcacacatattaagaaatgtaattaat 23827538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 26333314 - 26333346
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  26333314 ggcatttcacacatattaagaaatgtaattaat 26333346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 26541052 - 26541084
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  26541052 ggcatttcacacatattaagaaatgtaattaat 26541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 28129052 - 28129020
Alignment:
Q  8 attggtccacacggaagatgagaaggaagtttc 40  Q
    ||||| |||||||||||||||||||||||||||    
T  28129052 attggaccacacggaagatgagaaggaagtttc 28129020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 28129088 - 28129056
Alignment:
Q  8 attggtccacacggaagatgagaaggaagtttc 40  Q
    ||||| |||||||||||||||||||||||||||    
T  28129088 attggaccacacggaagatgagaaggaagtttc 28129056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 28646400 - 28646368
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  28646400 ggcatttcacatatattaagaaatgcaattaat 28646368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29361274 - 29361306
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29361274 ggcatttcacacatattaagaaatgtaattaat 29361306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 30679524 - 30679492
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  30679524 ggcatttcacacatattaagaaatgtaattaat 30679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 31045373 - 31045405
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  31045373 ggcatttcacacatattaagaaatgtaattaat 31045405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34347522 - 34347490
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  34347522 ggcatttcacacatattaagaaatgtaattaat 34347490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 38239115 - 38239083
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  38239115 ggcatttcacacatattaagaaatgtaattaat 38239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 40052177 - 40052209
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  40052177 ggcatttcacacatattaagaaatgtaattaat 40052209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42709926 - 42709894
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  42709926 ggcatttcacatatattaagaaatataattaat 42709894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42728468 - 42728436
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42728468 ggcatttcacacatattaagaaatgtaattaat 42728436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 44343674 - 44343706
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  44343674 ggcatttcacacatattaagaaatgtaattaat 44343706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 51560997 - 51560965
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  51560997 ggcatttcacacatattaagaaatgtaattaat 51560965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 27334472 - 27334431
Alignment:
Q  6 acattggtccacacggaagatgagaaggaagtttcagacttg 47  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  27334472 acattggtccacatggaagataagaaggaagtttcagacttg 27334431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 27395212 - 27395171
Alignment:
Q  6 acattggtccacacggaagatgagaaggaagtttcagacttg 47  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  27395212 acattggtccacatggaagataagaaggaagtttcagacttg 27395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 26409298 - 26409266
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  26409298 ggcatttcacatatattaagaaatgtaattaat 26409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 27532499 - 27532463
Alignment:
Q  16 acacggaagatgagaaggaagtttcagacttggtggt 52  Q
    |||||||||||||||||||||||||||||||| ||||    
T  27532499 acacggaagatgagaaggaagtttcagacttgatggt 27532463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 1779075 - 1779041
Alignment:
Q  188 ttggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||| |||||||||||||||||||||    
T  1779075 ttggcatttcacacatattaagaaatgtaattaat 1779041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 1352719 - 1352690
Alignment:
Q  193 atttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||||||||    
T  1352719 atttcacatatattaagaaatgtaattaat 1352690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 27678348 - 27678464
Alignment:
Q  61 tattccatatctatgctaatctaatcttgctattaactaactaactatc----taggttaaaatgaaaatattat---cagaactttttgatatatgcat 153  Q
    |||| |||||||||||||| ||||||||| | ||||||| |||| || |    ||| |||||||||||||| |||   || |||||| |||||| |||||    
T  27678348 tatttcatatctatgctaacctaatcttgttgttaactacctaattaacaagctagtttaaaatgaaaatagtatgatcaaaactttctgatatttgcat 27678447  T
Q  154 tattcactgtctttaat 170  Q
    || | ||||||||||||    
T  27678448 tactaactgtctttaat 27678464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 200291 - 200259
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  200291 ggcatttcacacatattaagaaatgtaattaat 200259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 3787343 - 3787311
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  3787343 ggcatttcacacatattaagaaatgtaattaat 3787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 8493428 - 8493460
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  8493428 ggcatttcacacatattaagaaatgtaattaat 8493460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 9660256 - 9660288
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  9660256 ggcatttcacacatattaagaaatgtaattaat 9660288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 11173136 - 11173104
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  11173136 ggcatttcacacatattaagaaatgtaattaat 11173104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 11173483 - 11173451
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  11173483 ggcatttcacatatattaagaaatataattaat 11173451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 13631093 - 13631125
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  13631093 ggcatttcacacatattaagaaatgtaattaat 13631125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 17941858 - 17941826
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  17941858 ggcatttcacacatattaagaaatgtaattaat 17941826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 21858777 - 21858745
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  21858777 ggcatttcacacatattaagaaatgtaattaat 21858745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 25526683 - 25526715
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  25526683 ggcatttcacacatattaagaaatgtaattaat 25526715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 30510785 - 30510817
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  30510785 ggcatttcacacatattaagaaatgtaattaat 30510817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 30739182 - 30739214
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  30739182 ggcatttcacacatattaagaaatgtaattaat 30739214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 31004155 - 31004123
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  31004155 ggcatttcacacatattaagaaatgtaattaat 31004123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 35039865 - 35039897
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  35039865 ggcatttcacacatattaagaaatgtaattaat 35039897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 13732 - 13764
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  13732 ggcatttcacatatattaagaaatgtaattaat 13764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 1042619 - 1042587
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  1042619 ggcatttcacatatattaagaaatgtaattaat 1042587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 26747079 - 26747047
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  26747079 ggcatttcacatatattaagaaatgtaattaat 26747047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 37954508 - 37954540
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  37954508 ggcatttcacatatattaagaaatgtaattaat 37954540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 37964867 - 37964899
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  37964867 ggcatttcacatatattaagaaatgtaattaat 37964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 23606432 - 23606402
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  23606432 catttcacatatattaagaaatgtaattaat 23606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 5449332 - 5449364
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  5449332 ggcatttcacatatattaagaaatgcaattaat 5449364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 5831193 - 5831161
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  5831193 ggcatttcacacatattaagaaatgtaattaat 5831161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 6247866 - 6247834
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  6247866 ggcatttcacacatattaagaaatgtaattaat 6247834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 6878763 - 6878731
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||| |||||||||||||||||||||||||    
T  6878763 ggcattttacatatattaagaaatgtaattaat 6878731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 7427200 - 7427232
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  7427200 ggcatttcacacatattaagaaatgtaattaat 7427232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 11714689 - 11714657
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  11714689 ggcatttcacacatattaagaaatgtaattaat 11714657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 16999442 - 16999410
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||| |||||||||||||    
T  16999442 ggcatttcacatatattaaaaaatgtaattaat 16999410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 18203049 - 18203081
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  18203049 ggcatttcacacatattaagaaatgtaattaat 18203081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 19715478 - 19715446
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  19715478 ggcatttcacatatattaagaaatataattaat 19715446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 22453345 - 22453377
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  22453345 ggcatttcacacatattaagaaatgtaattaat 22453377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 24422342 - 24422374
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  24422342 ggcatttcacacatattaagaaatgtaattaat 24422374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 24613095 - 24613063
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  24613095 ggcatttcacacatattaagaaatgtaattaat 24613063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 25838503 - 25838535
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  25838503 ggcatttcacacatattaagaaatgtaattaat 25838535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 28074303 - 28074335
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  28074303 ggcatttcacacatattaagaaatgtaattaat 28074335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 29938541 - 29938509
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29938541 ggcatttcacacatattaagaaatgtaattaat 29938509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 29949349 - 29949317
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29949349 ggcatttcacacatattaagaaatgtaattaat 29949317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 30087758 - 30087790
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  30087758 ggcatttcacacatattaagaaatgtaattaat 30087790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 32395067 - 32395099
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  32395067 ggcatttcacacatattaagaaatgtaattaat 32395099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34356765 - 34356733
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  34356765 ggcatttcacatatattaagaaatgcaattaat 34356733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34908932 - 34908900
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  34908932 ggcatttcacacatattaagaaatgtaattaat 34908900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 35631278 - 35631246
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  35631278 ggcatttcacacatattaagaaatgtaattaat 35631246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 39168820 - 39168852
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  39168820 ggcatttcacacatattaagaaatgtaattaat 39168852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 39645741 - 39645773
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  39645741 ggcatttcacacatattaagaaatgtaattaat 39645773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 42946451 - 42946483
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42946451 ggcatttcacacatattaagaaatgtaattaat 42946483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 4456644 - 4456612
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  4456644 ggcatttcacatatattaagaaatgtaattaat 4456612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 4889978 - 4890010
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  4889978 ggcatttcacatatattaagaaatgtaattaat 4890010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 8543011 - 8542979
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  8543011 ggcatttcacatatattaagaaatgtaattaat 8542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 43359903 - 43359871
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  43359903 ggcatttcacatatattaagaaatgtaattaat 43359871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 39729593 - 39729623
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  39729593 catttcacatatattaagaaatgtaattaat 39729623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 938047 - 938015
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  938047 ggcatttcacacatattaagaaatgtaattaat 938015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 3098229 - 3098261
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  3098229 ggcatttcacacatattaagaaatgtaattaat 3098261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 4047633 - 4047665
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  4047633 ggcatttcacacatattaagaaatgtaattaat 4047665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 5377996 - 5378028
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  5377996 ggcatttcacacatattaagaaatgtaattaat 5378028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 7414866 - 7414834
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  7414866 ggcatttcacacatattaagaaatgtaattaat 7414834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 8042391 - 8042423
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  8042391 ggcatttcacacatattaagaaatgtaattaat 8042423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 8050639 - 8050607
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  8050639 ggcatttcacatatattaagaaatataattaat 8050607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 8225864 - 8225832
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  8225864 ggcatttcacacatattaagaaatgtaattaat 8225832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 9461609 - 9461577
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  9461609 ggcatttcacacatattaagaaatgtaattaat 9461577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 11313196 - 11313164
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  11313196 ggcatttcacacatattaagaaatgtaattaat 11313164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 12361038 - 12361006
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  12361038 ggcatttcacacatattaagaaatgtaattaat 12361006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 12504094 - 12504062
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  12504094 ggcatttcacacatattaagaaatgtaattaat 12504062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 12659256 - 12659224
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  12659256 ggcatttcacacatattaagaaatgtaattaat 12659224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 22801718 - 22801750
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  22801718 ggcatttcacacatattaagaaatgtaattaat 22801750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 27187243 - 27187275
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  27187243 ggcatttcacacatattaagaaatgtaattaat 27187275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 28377886 - 28377854
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  28377886 ggcatttcacacatattaagaaatgtaattaat 28377854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29000746 - 29000778
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29000746 ggcatttcacacatattaagaaatgtaattaat 29000778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 222
Target Start/End: Original strand, 29619252 - 29619280
Alignment:
Q  194 tttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||    
T  29619252 tttcacatatattaagaaatgtaattaat 29619280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 29816455 - 29816423
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29816455 ggcatttcacacatattaagaaatgtaattaat 29816423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34163374 - 34163342
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  34163374 ggcatttcacacatattaagaaatgtaattaat 34163342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 34606826 - 34606858
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  34606826 ggcatttcacacatattaagaaatgtaattaat 34606858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 35189426 - 35189394
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  35189426 ggcatttcacacatattaagaaatgtaattaat 35189394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 36302289 - 36302321
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  36302289 ggcatttcacacatattaagaaatgtaattaat 36302321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 36347237 - 36347269
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  36347237 ggcatttcacacatattaagaaatgtaattaat 36347269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 37410884 - 37410852
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  37410884 ggcatttcacacatattaagaaatgtaattaat 37410852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42941017 - 42940985
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42941017 ggcatttcacacatattaagaaatgtaattaat 42940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 17609008 - 17609040
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  17609008 ggcatttcacatatattaagaaatgtaattaat 17609040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34498323 - 34498291
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  34498323 ggcatttcacatatattaagaaatgtaattaat 34498291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 35836303 - 35836271
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  35836303 ggcatttcacatatattaagaaatgtaattaat 35836271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 32859812 - 32859843
Alignment:
Q  191 gcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||||||||||    
T  32859812 gcatttcacatatattaagaaatgtaattaat 32859843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 42507564 - 42507598
Alignment:
Q  188 ttggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||| |||||||||||||||||||||    
T  42507564 ttggcatttcacacatattaagaaatgtaattaat 42507598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 4293959 - 4293991
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  4293959 ggcatttcacacatattaagaaatgtaattaat 4293991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 11248778 - 11248810
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  11248778 ggcatttcacacatattaagaaatgtaattaat 11248810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 18052967 - 18052935
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  18052967 ggcatttcacacatattaagaaatgtaattaat 18052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 20180618 - 20180586
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  20180618 ggcatttcacacatattaagaaatgtaattaat 20180586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 20540283 - 20540315
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  20540283 ggcatttcacacatattaagaaatgtaattaat 20540315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 21634819 - 21634787
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  21634819 ggcatttcacacatattaagaaatgtaattaat 21634787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 23137936 - 23137904
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23137936 ggcatttcacacatattaagaaatgtaattaat 23137904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 23511125 - 23511157
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23511125 ggcatttcacacatattaagaaatgtaattaat 23511157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 25771008 - 25771040
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  25771008 ggcatttcacacatattaagaaatgtaattaat 25771040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 26799595 - 26799563
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  26799595 ggcatttcacacatattaagaaatgtaattaat 26799563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 26882974 - 26882942
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  26882974 ggcatttcacacatattaagaaatgtaattaat 26882942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29290141 - 29290173
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29290141 ggcatttcacacatattaagaaatgtaattaat 29290173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29494793 - 29494825
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29494793 ggcatttcacacatattaagaaatgtaattaat 29494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29832573 - 29832605
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29832573 ggcatttcacacatattaagaaatgtaattaat 29832605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 31487104 - 31487072
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  31487104 ggcatttcacacatattaagaaatgtaattaat 31487072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 33501589 - 33501557
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  33501589 ggcatttcacacatattaagaaatgtaattaat 33501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 36937449 - 36937417
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  36937449 ggcatttcacacatattaagaaatgtaattaat 36937417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 37730784 - 37730816
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  37730784 ggcatttcacatatattaagaaatgcaattaat 37730816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 38793851 - 38793883
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  38793851 ggcatttcacacatattaagaaatgtaattaat 38793883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 41987993 - 41988025
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  41987993 ggcatttcacacatattaagaaatgtaattaat 41988025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42168528 - 42168496
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42168528 ggcatttcacacatattaagaaatgtaattaat 42168496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 42629612 - 42629644
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42629612 ggcatttcacacatattaagaaatgtaattaat 42629644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 45250321 - 45250289
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  45250321 ggcatttcacacatattaagaaatgtaattaat 45250289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 48380824 - 48380792
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  48380824 ggcatttcacacatattaagaaatgtaattaat 48380792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 50534315 - 50534283
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  50534315 ggcatttcacacatattaagaaatgtaattaat 50534283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 51234742 - 51234774
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  51234742 ggcatttcacacatattaagaaatgtaattaat 51234774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 51625088 - 51625056
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  51625088 ggcatttcacacatattaagaaatgtaattaat 51625056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 56038446 - 56038478
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  56038446 ggcatttcacacatattaagaaatgtaattaat 56038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 56299936 - 56299904
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  56299936 ggcatttcacacatattaagaaatgtaattaat 56299904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 23782316 - 23782284
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  23782316 ggcatttcacatatattaagaaatgtaattaat 23782284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29227201 - 29227233
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  29227201 ggcatttcacatatattaagaaatgtaattaat 29227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 36669399 - 36669367
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  36669399 ggcatttcacatatattaagaaatgtaattaat 36669367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 52679619 - 52679650
Alignment:
Q  191 gcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||||||||||    
T  52679619 gcatttcacatatattaagaaatgtaattaat 52679650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 3835468 - 3835434
Alignment:
Q  188 ttggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||| |||||||||||||||||||||    
T  3835468 ttggcatttcacacatattaagaaatgtaattaat 3835434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 54103792 - 54103822
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  54103792 catttcacatatattaagaaatgtaattaat 54103822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 2510056 - 2510088
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  2510056 ggcatttcacagatattaagaaatgtaattaat 2510088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 3671411 - 3671443
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  3671411 ggcatttcacacatattaagaaatgtaattaat 3671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 4392358 - 4392390
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  4392358 ggcatttcacacatattaagaaatgtaattaat 4392390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 8096644 - 8096676
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  8096644 ggcatttcacacatattaagaaatgtaattaat 8096676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 8108686 - 8108654
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  8108686 ggcatttcacacatattaagaaatgtaattaat 8108654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 15020029 - 15019997
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  15020029 ggcatttcacacatattaagaaatgtaattaat 15019997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 17378422 - 17378390
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  17378422 ggcatttcacacatattaagaaatgtaattaat 17378390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 19960856 - 19960888
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  19960856 ggcatttcacacatattaagaaatgtaattaat 19960888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 21216697 - 21216729
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  21216697 ggcatttcacacatattaagaaatgtaattaat 21216729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 23609264 - 23609296
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23609264 ggcatttcacacatattaagaaatgtaattaat 23609296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 23782438 - 23782406
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23782438 ggcatttcacacatattaagaaatgtaattaat 23782406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 24089579 - 24089547
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||| ||||||||||||||||||||||    
T  24089579 ggcatttcacgtatattaagaaatgtaattaat 24089547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 27942063 - 27942095
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  27942063 ggcatttcacacatattaagaaatgtaattaat 27942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 28686193 - 28686225
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  28686193 ggcatttcacacatattaagaaatgtaattaat 28686225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 30190574 - 30190542
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  30190574 ggcatttcacacatattaagaaatgtaattaat 30190542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 31787046 - 31787014
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  31787046 ggcatttcacacatattaagaaatgtaattaat 31787014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 33192994 - 33193026
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  33192994 ggcatttcacacatattaagaaatgtaattaat 33193026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 33839829 - 33839861
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  33839829 ggcatttcacacatattaagaaatgtaattaat 33839861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 35084368 - 35084400
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  35084368 ggcatttcacacatattaagaaatgtaattaat 35084400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 35847064 - 35847032
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  35847064 ggcatttcacatatattaagaaatgcaattaat 35847032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 38096280 - 38096248
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  38096280 ggcatttcacacatattaagaaatgtaattaat 38096248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 38483363 - 38483395
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  38483363 ggcatttcacacatattaagaaatgtaattaat 38483395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 38999695 - 38999663
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  38999695 ggcatttcacacatattaagaaatgtaattaat 38999663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42490547 - 42490515
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42490547 ggcatttcacacatattaagaaatgtaattaat 42490515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 43175985 - 43175953
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  43175985 ggcatttcacacatattaagaaatgtaattaat 43175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 45674150 - 45674182
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  45674150 ggcatttcacacatattaagaaatgtaattaat 45674182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 45823917 - 45823949
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  45823917 ggcatttcacacatattaagaaatgtaattaat 45823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 46336941 - 46336909
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  46336941 ggcatttcacatatattaagaaatgcaattaat 46336909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 47054247 - 47054215
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  47054247 ggcatttcacacatattaagaaatgtaattaat 47054215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 47142452 - 47142420
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  47142452 ggcatttcacacatattaagaaatgtaattaat 47142420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 47241413 - 47241381
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  47241413 ggcatttcacacatattaagaaatgtaattaat 47241381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 48333959 - 48333927
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  48333959 ggcatttcacacatattaagaaatgtaattaat 48333927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 49818529 - 49818497
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  49818529 ggcatttcacatatattaagaaatgcaattaat 49818497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 51166313 - 51166345
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  51166313 ggcatttcacacatattaagaaatgtaattaat 51166345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 52060302 - 52060334
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  52060302 ggcatttcacacatattaagaaatgtaattaat 52060334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 53654997 - 53655029
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  53654997 ggcatttcacacatattaagaaatgtaattaat 53655029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 54240856 - 54240888
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  54240856 ggcatttcacacatattaagaaatgtaattaat 54240888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 2893777 - 2893809
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  2893777 ggcatttcacatatattaagaaatgtaattaat 2893809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 19003156 - 19003124
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  19003156 ggcatttcacatatattaagaaatgtaattaat 19003124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29843692 - 29843724
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  29843692 ggcatttcacatatattaagaaatgtaattaat 29843724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 40172133 - 40172101
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||||    
T  40172133 ggcatttcacatatattaagaaatgtaattaat 40172101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 3628418 - 3628448
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  3628418 catttcacatatattaagaaatgtaattaat 3628448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 28206440 - 28206470
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  28206440 catttcacatatattaagaaatgtaattaat 28206470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 325162 - 325194
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  325162 ggcatttcacacatattaagaaatgtaattaat 325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 3376463 - 3376495
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  3376463 ggcatttcacacatattaagaaatgtaattaat 3376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 9047269 - 9047301
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  9047269 ggcatttcacacatattaagaaatgtaattaat 9047301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 12467880 - 12467848
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  12467880 ggcatttcacacatattaagaaatgtaattaat 12467848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 14528000 - 14527968
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  14528000 ggcatttcacacatattaagaaatgtaattaat 14527968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 14885269 - 14885237
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  14885269 ggcatttcacacatattaagaaatgtaattaat 14885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 14943294 - 14943326
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  14943294 ggcatttcacacatattaagaaatgtaattaat 14943326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 19166212 - 19166244
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  19166212 ggcatttcacacatattaagaaatgtaattaat 19166244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 19576297 - 19576265
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  19576297 ggcatttcacacatattaagaaatgtaattaat 19576265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 22061230 - 22061198
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||| |||||||||||||||||||||||||    
T  22061230 ggcatttaacatatattaagaaatgtaattaat 22061198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 24000155 - 24000187
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  24000155 ggcatttcacacatattaagaaatgtaattaat 24000187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 26849853 - 26849885
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  26849853 ggcatttcacacatattaagaaatgtaattaat 26849885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 28330995 - 28330963
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  28330995 ggcatttcacacatattaagaaatgtaattaat 28330963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 28786754 - 28786786
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  28786754 ggcatttcacacatattaagaaatgtaattaat 28786786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 30803679 - 30803647
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  30803679 ggcatttcacatatattaagaaatataattaat 30803647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34213367 - 34213335
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  34213367 ggcatttcacacatattaagaaatgtaattaat 34213335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 36068355 - 36068323
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  36068355 ggcatttcacacatattaagaaatgtaattaat 36068323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 36602058 - 36602090
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  36602058 ggcatttcacacatattaagaaatgtaattaat 36602090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 38448363 - 38448331
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  38448363 ggcatttcacacatattaagaaatgtaattaat 38448331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 41096176 - 41096144
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  41096176 ggcatttcacacatattaagaaatgtaattaat 41096144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 41187032 - 41187000
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  41187032 ggcatttcacacatattaagaaatgtaattaat 41187000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42056287 - 42056255
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42056287 ggcatttcacacatattaagaaatgtaattaat 42056255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 28472101 - 28472131
Alignment:
Q  192 catttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||||||||||    
T  28472101 catttcacatatattaagaaatgtaattaat 28472131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 29985798 - 29985832
Alignment:
Q  188 ttggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||| |||||||||||||||||||||    
T  29985798 ttggcatttcacacatattaagaaatgtaattaat 29985832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 1643536 - 1643568
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  1643536 ggcatttcacacatattaagaaatgtaattaat 1643568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 2887504 - 2887472
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  2887504 ggcatttcacatatattaagaaatgcaattaat 2887472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 3225686 - 3225654
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  3225686 ggcatttcacacatattaagaaatgtaattaat 3225654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 4513390 - 4513422
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  4513390 ggcatttcacacatattaagaaatgtaattaat 4513422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 5528635 - 5528603
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||| |||||||||||||    
T  5528635 ggcatttcacatatattaaaaaatgtaattaat 5528603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 5680243 - 5680275
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  5680243 ggcatttcacacatattaagaaatgtaattaat 5680275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 5705295 - 5705327
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  5705295 ggcatttcacacatattaagaaatgtaattaat 5705327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 10439231 - 10439263
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  10439231 ggcatttcacacatattaagaaatgtaattaat 10439263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 10452941 - 10452973
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  10452941 ggcatttcacacatattaagaaatgtaattaat 10452973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 13446218 - 13446186
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  13446218 ggcatttcacacatattaagaaatgtaattaat 13446186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 19785609 - 19785641
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  19785609 ggcatttcacatatattaagaaatataattaat 19785641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 22706794 - 22706826
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  22706794 ggcatttcacacatattaagaaatgtaattaat 22706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 23059322 - 23059290
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  23059322 ggcatttcacacatattaagaaatgtaattaat 23059290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 24923406 - 24923438
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  24923406 ggcatttcacacatattaagaaatgtaattaat 24923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 29155524 - 29155556
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  29155524 ggcatttcacacatattaagaaatgtaattaat 29155556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 35542211 - 35542179
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  35542211 ggcatttcacacatattaagaaatgtaattaat 35542179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 37115983 - 37115951
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  37115983 ggcatttcacacatattaagaaatgtaattaat 37115951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 39199297 - 39199265
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  39199297 ggcatttcacacatattaagaaatgtaattaat 39199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 41821051 - 41821019
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  41821051 ggcatttcacatatattaagaaatgcaattaat 41821019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 42122153 - 42122121
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  42122153 ggcatttcacacatattaagaaatgtaattaat 42122121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 43468304 - 43468336
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  43468304 ggcatttcacacatattaagaaatgtaattaat 43468336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 44187133 - 44187101
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  44187133 ggcatttcacacatattaagaaatgtaattaat 44187101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 44481237 - 44481205
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  44481237 ggcatttcacacatattaagaaatgtaattaat 44481205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 45780692 - 45780724
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  45780692 ggcatttcacacatattaagaaatgtaattaat 45780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 46373033 - 46373065
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  46373033 ggcatttcacacatattaagaaatgtaattaat 46373065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 47578710 - 47578742
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  47578710 ggcatttcacacatattaagaaatgtaattaat 47578742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 1696 - 1664
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  1696 ggcatttcacacatattaagaaatgtaattaat 1664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1335
Description:

Target: scaffold1335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 1199 - 1231
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||||||||||||||||| |||||||    
T  1199 ggcatttcacatatattaagaaatgcaattaat 1231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 2859 - 2891
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  2859 ggcatttcacacatattaagaaatgtaattaat 2891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 12670 - 12702
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  12670 ggcatttcacacatattaagaaatgtaattaat 12702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 4010 - 4042
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    |||||||||||||||||||||||| ||||||||    
T  4010 ggcatttcacatatattaagaaatataattaat 4042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 99113 - 99081
Alignment:
Q  190 ggcatttcacatatattaagaaatgtaattaat 222  Q
    ||||||||||| |||||||||||||||||||||    
T  99113 ggcatttcacacatattaagaaatgtaattaat 99081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University