View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15489_high_21 (Length: 258)
Name: NF15489_high_21
Description: NF15489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15489_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 39306118 - 39305881
Alignment:
| Q |
1 |
tatttatgatactattaactcattcataattctattataatatttatgagagagaaagtgacaatagtgttttttgttgtgataggcattgactaacgga |
100 |
Q |
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| T |
39306118 |
tatttatgatactattaactcat----aattctattataatatttatgagagagaaagtgacaatagtgttttttgttgtgataggcattgactaatgga |
39306023 |
T |
|
| Q |
101 |
gtatacaagagttgtctccatagggtattggctaataaggagaaggatagaaagactcttgctttctttttgtgtccaaaaggagacaaaattgtgagag |
200 |
Q |
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| T |
39306022 |
gtatacaagagttgtctccatagggtattggctaatagggagaaggatagaaagactcttgctttctttttgtgtccaaaaggagacaaaattgtgagag |
39305923 |
T |
|
| Q |
201 |
cacctgaaaatatactgggaagacaagagccaatgaaatatc |
242 |
Q |
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||||||||||||||||||||||||||||||||| |||||||| |
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| T |
39305922 |
cacctgaaaatatactgggaagacaagagccaacgaaatatc |
39305881 |
T |
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