View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1548_high_27 (Length: 226)
Name: NF1548_high_27
Description: NF1548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1548_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 46681495 - 46681298
Alignment:
| Q |
13 |
caaaggagaaaatgaccaatttttcagtgttcaaacgaataacaatgcaaggaatggtgtgaagagtgttttgcgtccaactagagtaacgattagttgt |
112 |
Q |
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| T |
46681495 |
caaaggagaaaatgaccaattttttagtgttcaaacgaataacaatgcaaggaatggtgtgaagagtgttttgcgtccaactagagtaacgattagttgt |
46681396 |
T |
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| Q |
113 |
cctgaaaagtgtgaggttgctgggaagcttgtgttgctacctgaaagttttaaagagttacttgaaattggatctaagaaatttggtatagttgctac |
210 |
Q |
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| T |
46681395 |
cctgaaaagtgtgaggttgctgggaagcttgtgttgctacctgaaagttttaaagagttacttgaaattggatctaagaaatttggtatagttgctac |
46681298 |
T |
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